Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050975.t1 | XP_013444518.1 | 79.8 | 233 | 45 | 1 | 1 | 233 | 151 | 381 | 6.90E-100 | 373.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050975.t1 | Q9M126 | 48.3 | 174 | 85 | 3 | 47 | 218 | 6 | 176 | 3.4e-39 | 163.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050975.t1 | G7ZZJ1 | 79.8 | 233 | 45 | 1 | 1 | 233 | 151 | 381 | 5.0e-100 | 373.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050975.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050975.t1 | MTR_8g023900 | 85.837 | 233 | 31 | 1 | 1 | 233 | 151 | 381 | 1.46e-145 | 415 |
MS.gene050975.t1 | MTR_8g023900 | 63.298 | 188 | 67 | 2 | 34 | 219 | 1 | 188 | 5.89e-80 | 248 |
MS.gene050975.t1 | MTR_8g023930 | 77.660 | 188 | 42 | 0 | 46 | 233 | 25 | 212 | 9.42e-107 | 317 |
MS.gene050975.t1 | MTR_8g023840 | 70.048 | 207 | 61 | 1 | 34 | 240 | 1 | 206 | 3.45e-96 | 287 |
MS.gene050975.t1 | MTR_8g023860 | 69.849 | 199 | 60 | 0 | 34 | 232 | 1 | 199 | 3.88e-94 | 283 |
MS.gene050975.t1 | MTR_8g023880 | 55.828 | 163 | 54 | 5 | 46 | 194 | 8 | 166 | 4.63e-52 | 170 |
MS.gene050975.t1 | MTR_3g093040 | 47.191 | 178 | 79 | 6 | 42 | 212 | 105 | 274 | 3.73e-46 | 156 |
MS.gene050975.t1 | MTR_5g069030 | 45.699 | 186 | 86 | 6 | 46 | 223 | 26 | 204 | 4.60e-44 | 157 |
MS.gene050975.t1 | MTR_3g093050 | 49.057 | 159 | 72 | 4 | 46 | 198 | 23 | 178 | 1.19e-42 | 152 |
MS.gene050975.t1 | MTR_3g093050 | 49.057 | 159 | 72 | 4 | 46 | 198 | 23 | 178 | 2.15e-42 | 152 |
MS.gene050975.t1 | MTR_2g064090 | 45.283 | 159 | 76 | 5 | 42 | 193 | 4 | 158 | 6.37e-41 | 143 |
MS.gene050975.t1 | MTR_6g477900 | 44.848 | 165 | 80 | 6 | 46 | 202 | 7 | 168 | 1.18e-40 | 140 |
MS.gene050975.t1 | MTR_5g014300 | 45.122 | 164 | 81 | 4 | 46 | 201 | 7 | 169 | 1.59e-39 | 139 |
MS.gene050975.t1 | MTR_5g076850 | 43.023 | 172 | 86 | 5 | 46 | 208 | 7 | 175 | 1.63e-38 | 142 |
MS.gene050975.t1 | MTR_2g086880 | 46.452 | 155 | 76 | 5 | 48 | 201 | 21 | 169 | 4.95e-38 | 139 |
MS.gene050975.t1 | MTR_8g063550 | 42.949 | 156 | 78 | 6 | 43 | 192 | 6 | 156 | 5.49e-38 | 135 |
MS.gene050975.t1 | MTR_2g086880 | 46.452 | 155 | 76 | 5 | 48 | 201 | 21 | 169 | 6.51e-38 | 139 |
MS.gene050975.t1 | MTR_3g096140 | 42.675 | 157 | 79 | 6 | 42 | 192 | 6 | 157 | 8.70e-38 | 134 |
MS.gene050975.t1 | MTR_8g063550 | 42.949 | 156 | 78 | 6 | 43 | 192 | 6 | 156 | 1.29e-37 | 137 |
MS.gene050975.t1 | MTR_1g090723 | 46.358 | 151 | 74 | 4 | 48 | 193 | 11 | 159 | 1.78e-37 | 138 |
MS.gene050975.t1 | MTR_1g090723 | 46.358 | 151 | 74 | 4 | 48 | 193 | 11 | 159 | 2.46e-37 | 138 |
MS.gene050975.t1 | MTR_8g063550 | 42.949 | 156 | 78 | 6 | 43 | 192 | 6 | 156 | 3.44e-37 | 135 |
MS.gene050975.t1 | MTR_3g096140 | 42.675 | 157 | 79 | 6 | 42 | 192 | 6 | 157 | 5.04e-37 | 133 |
MS.gene050975.t1 | MTR_1g090723 | 45.395 | 152 | 75 | 4 | 48 | 193 | 11 | 160 | 7.54e-37 | 137 |
MS.gene050975.t1 | MTR_3g064580 | 39.444 | 180 | 99 | 4 | 46 | 218 | 7 | 183 | 7.63e-37 | 137 |
MS.gene050975.t1 | MTR_4g098630 | 42.473 | 186 | 97 | 6 | 46 | 224 | 7 | 189 | 2.63e-36 | 130 |
MS.gene050975.t1 | MTR_8g093580 | 42.949 | 156 | 78 | 6 | 43 | 192 | 6 | 156 | 1.19e-35 | 132 |
MS.gene050975.t1 | MTR_2g080010 | 40.110 | 182 | 86 | 5 | 29 | 193 | 2 | 177 | 1.21e-35 | 130 |
MS.gene050975.t1 | MTR_0036s0150 | 43.046 | 151 | 79 | 3 | 48 | 193 | 8 | 156 | 3.84e-34 | 129 |
MS.gene050975.t1 | MTR_7g100990 | 42.038 | 157 | 78 | 5 | 46 | 192 | 12 | 165 | 6.53e-34 | 124 |
MS.gene050975.t1 | MTR_2157s0010 | 40.838 | 191 | 85 | 8 | 34 | 203 | 1 | 184 | 6.82e-34 | 123 |
MS.gene050975.t1 | MTR_7g085220 | 42.169 | 166 | 76 | 6 | 46 | 194 | 9 | 171 | 1.20e-33 | 124 |
MS.gene050975.t1 | MTR_1g069805 | 40.351 | 171 | 82 | 6 | 32 | 196 | 4 | 160 | 1.89e-33 | 122 |
MS.gene050975.t1 | MTR_4g081870 | 44.025 | 159 | 70 | 6 | 46 | 192 | 10 | 161 | 2.18e-33 | 122 |
MS.gene050975.t1 | MTR_1g090720 | 43.312 | 157 | 74 | 4 | 48 | 192 | 45 | 198 | 3.19e-33 | 125 |
MS.gene050975.t1 | MTR_4g089135 | 42.857 | 140 | 76 | 3 | 46 | 184 | 16 | 152 | 7.81e-33 | 122 |
MS.gene050975.t1 | MTR_3g109340 | 41.447 | 152 | 82 | 4 | 46 | 193 | 23 | 171 | 9.55e-33 | 122 |
MS.gene050975.t1 | MTR_2g093810 | 42.405 | 158 | 78 | 5 | 46 | 193 | 15 | 169 | 1.34e-32 | 121 |
MS.gene050975.t1 | MTR_3g096920 | 43.558 | 163 | 76 | 6 | 46 | 199 | 8 | 163 | 1.62e-32 | 120 |
MS.gene050975.t1 | MTR_3g070030 | 44.872 | 156 | 72 | 7 | 46 | 192 | 20 | 170 | 1.80e-32 | 121 |
MS.gene050975.t1 | MTR_2g079990 | 42.331 | 163 | 77 | 6 | 39 | 192 | 10 | 164 | 4.41e-32 | 120 |
MS.gene050975.t1 | MTR_3g109340 | 41.830 | 153 | 81 | 5 | 46 | 193 | 23 | 172 | 5.52e-32 | 120 |
MS.gene050975.t1 | MTR_1g008740 | 36.649 | 191 | 103 | 5 | 8 | 193 | 1 | 178 | 5.91e-32 | 120 |
MS.gene050975.t1 | MTR_2g062730 | 43.429 | 175 | 85 | 7 | 42 | 205 | 8 | 179 | 5.98e-32 | 120 |
MS.gene050975.t1 | MTR_5g012080 | 44.516 | 155 | 77 | 6 | 44 | 192 | 7 | 158 | 7.64e-32 | 119 |
MS.gene050975.t1 | MTR_3g088110 | 38.889 | 180 | 94 | 6 | 42 | 212 | 5 | 177 | 7.95e-32 | 118 |
MS.gene050975.t1 | MTR_8g094580 | 37.755 | 196 | 93 | 8 | 46 | 223 | 8 | 192 | 8.12e-32 | 118 |
MS.gene050975.t1 | MTR_7g097090 | 40.994 | 161 | 83 | 5 | 32 | 190 | 4 | 154 | 9.82e-32 | 118 |
MS.gene050975.t1 | MTR_8g059170 | 41.566 | 166 | 83 | 7 | 42 | 199 | 12 | 171 | 1.97e-31 | 118 |
MS.gene050975.t1 | MTR_5g041940 | 43.478 | 161 | 68 | 7 | 46 | 192 | 4 | 155 | 1.99e-31 | 116 |
MS.gene050975.t1 | MTR_8g076110 | 42.857 | 154 | 79 | 6 | 44 | 192 | 6 | 155 | 2.33e-31 | 117 |
MS.gene050975.t1 | MTR_1g008740 | 40.523 | 153 | 84 | 3 | 46 | 193 | 14 | 164 | 2.59e-31 | 118 |
MS.gene050975.t1 | MTR_3g435150 | 39.344 | 183 | 86 | 8 | 19 | 193 | 2 | 167 | 2.73e-31 | 117 |
MS.gene050975.t1 | MTR_4g035590 | 45.509 | 167 | 76 | 8 | 44 | 202 | 8 | 167 | 2.81e-31 | 118 |
MS.gene050975.t1 | MTR_8g467490 | 39.130 | 161 | 80 | 4 | 48 | 193 | 17 | 174 | 3.14e-31 | 119 |
MS.gene050975.t1 | MTR_3g096920 | 47.015 | 134 | 64 | 4 | 46 | 178 | 8 | 135 | 3.84e-31 | 117 |
MS.gene050975.t1 | MTR_4g108760 | 41.026 | 156 | 79 | 7 | 46 | 193 | 18 | 168 | 4.53e-31 | 118 |
MS.gene050975.t1 | MTR_1g097300 | 43.448 | 145 | 73 | 5 | 48 | 191 | 22 | 158 | 5.84e-31 | 120 |
MS.gene050975.t1 | MTR_4g052620 | 40.645 | 155 | 80 | 4 | 46 | 189 | 6 | 159 | 6.53e-31 | 115 |
MS.gene050975.t1 | MTR_2g078700 | 47.656 | 128 | 63 | 3 | 46 | 172 | 24 | 148 | 8.72e-31 | 117 |
MS.gene050975.t1 | MTR_6g012670 | 44.966 | 149 | 70 | 6 | 46 | 193 | 21 | 158 | 1.85e-30 | 115 |
MS.gene050975.t1 | MTR_6g084430 | 41.290 | 155 | 76 | 7 | 46 | 193 | 6 | 152 | 2.93e-30 | 115 |
MS.gene050975.t1 | MTR_4g101680 | 40.994 | 161 | 86 | 6 | 44 | 199 | 7 | 163 | 4.45e-30 | 115 |
MS.gene050975.t1 | MTR_2g079990 | 44.444 | 135 | 69 | 4 | 39 | 172 | 10 | 139 | 5.65e-30 | 115 |
MS.gene050975.t1 | MTR_5g021710 | 42.208 | 154 | 80 | 6 | 44 | 192 | 8 | 157 | 5.86e-30 | 114 |
MS.gene050975.t1 | MTR_4g134460 | 40.491 | 163 | 87 | 7 | 48 | 206 | 57 | 213 | 1.18e-29 | 115 |
MS.gene050975.t1 | MTR_3g096140 | 40.580 | 138 | 73 | 5 | 61 | 192 | 2 | 136 | 1.22e-29 | 113 |
MS.gene050975.t1 | MTR_4g036030 | 42.857 | 154 | 79 | 6 | 44 | 192 | 7 | 156 | 1.36e-29 | 114 |
MS.gene050975.t1 | MTR_2g068920 | 38.690 | 168 | 82 | 5 | 44 | 192 | 20 | 185 | 1.44e-29 | 112 |
MS.gene050975.t1 | MTR_2g064470 | 36.364 | 176 | 96 | 6 | 46 | 212 | 12 | 180 | 2.14e-29 | 112 |
MS.gene050975.t1 | MTR_5g040420 | 33.163 | 196 | 114 | 4 | 48 | 229 | 17 | 209 | 2.39e-29 | 114 |
MS.gene050975.t1 | MTR_6g032770 | 41.406 | 128 | 71 | 3 | 46 | 172 | 19 | 143 | 2.92e-29 | 113 |
MS.gene050975.t1 | MTR_6g011860 | 38.554 | 166 | 81 | 6 | 43 | 193 | 15 | 174 | 3.59e-29 | 113 |
MS.gene050975.t1 | MTR_1g096430 | 41.558 | 154 | 81 | 6 | 44 | 192 | 7 | 156 | 4.21e-29 | 112 |
MS.gene050975.t1 | MTR_8g099750 | 37.195 | 164 | 87 | 4 | 46 | 198 | 15 | 173 | 4.59e-29 | 109 |
MS.gene050975.t1 | MTR_2g068880 | 44.697 | 132 | 68 | 4 | 44 | 172 | 21 | 150 | 1.11e-28 | 110 |
MS.gene050975.t1 | MTR_3g116070 | 43.750 | 128 | 69 | 2 | 46 | 172 | 24 | 149 | 1.69e-28 | 110 |
MS.gene050975.t1 | MTR_7g005280 | 39.073 | 151 | 82 | 4 | 46 | 192 | 16 | 160 | 3.71e-28 | 108 |
MS.gene050975.t1 | MTR_4g075980 | 39.865 | 148 | 84 | 4 | 48 | 193 | 18 | 162 | 4.77e-28 | 108 |
MS.gene050975.t1 | MTR_7g085260 | 43.284 | 134 | 69 | 5 | 42 | 172 | 15 | 144 | 5.33e-28 | 110 |
MS.gene050975.t1 | MTR_7g011130 | 46.457 | 127 | 62 | 5 | 47 | 172 | 21 | 142 | 7.21e-28 | 109 |
MS.gene050975.t1 | MTR_2g086690 | 39.744 | 156 | 81 | 5 | 46 | 189 | 5 | 159 | 9.03e-28 | 107 |
MS.gene050975.t1 | MTR_8g024480 | 36.500 | 200 | 100 | 9 | 34 | 215 | 5 | 195 | 4.17e-27 | 108 |
MS.gene050975.t1 | MTR_7g011120 | 45.669 | 127 | 63 | 5 | 47 | 172 | 10 | 131 | 1.60e-26 | 104 |
MS.gene050975.t1 | MTR_3g070040 | 43.590 | 156 | 70 | 8 | 47 | 192 | 10 | 157 | 1.25e-25 | 102 |
MS.gene050975.t1 | MTR_5g090970 | 42.520 | 127 | 68 | 4 | 48 | 172 | 21 | 144 | 2.43e-25 | 101 |
MS.gene050975.t1 | MTR_5g090970 | 42.520 | 127 | 67 | 4 | 48 | 172 | 21 | 143 | 3.65e-25 | 101 |
MS.gene050975.t1 | MTR_3g098810 | 33.721 | 172 | 95 | 5 | 46 | 203 | 15 | 181 | 8.89e-25 | 99.0 |
MS.gene050975.t1 | MTR_3g098810 | 37.037 | 135 | 77 | 4 | 46 | 177 | 15 | 144 | 1.03e-23 | 94.4 |
MS.gene050975.t1 | MTR_7g105170 | 33.742 | 163 | 93 | 5 | 46 | 194 | 5 | 166 | 3.17e-22 | 92.4 |
MS.gene050975.t1 | MTR_4g094302 | 29.714 | 175 | 96 | 6 | 46 | 206 | 12 | 173 | 8.83e-22 | 89.7 |
MS.gene050975.t1 | MTR_4g094302 | 36.154 | 130 | 67 | 5 | 46 | 172 | 12 | 128 | 1.31e-20 | 85.5 |
MS.gene050975.t1 | MTR_3g096400 | 29.016 | 193 | 111 | 5 | 46 | 222 | 8 | 190 | 3.94e-19 | 82.8 |
MS.gene050975.t1 | MTR_8g093790 | 31.098 | 164 | 92 | 6 | 46 | 208 | 11 | 154 | 6.54e-19 | 81.6 |
MS.gene050975.t1 | MTR_8g094580 | 35.971 | 139 | 63 | 6 | 103 | 223 | 8 | 138 | 5.91e-17 | 77.4 |
MS.gene050975.t1 | MTR_7g116460 | 34.641 | 153 | 82 | 7 | 51 | 191 | 11 | 157 | 2.06e-13 | 67.4 |
MS.gene050975.t1 | MTR_7g070140 | 38.356 | 73 | 44 | 1 | 101 | 172 | 17 | 89 | 2.30e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050975.t1 | AT4G01550 | 48.276 | 174 | 85 | 3 | 47 | 218 | 6 | 176 | 1.65e-47 | 163 |
MS.gene050975.t1 | AT4G35580 | 51.572 | 159 | 66 | 5 | 46 | 197 | 10 | 164 | 6.75e-47 | 163 |
MS.gene050975.t1 | AT4G35580 | 51.572 | 159 | 66 | 5 | 46 | 197 | 10 | 164 | 7.40e-47 | 162 |
MS.gene050975.t1 | AT4G35580 | 51.572 | 159 | 66 | 5 | 46 | 197 | 10 | 164 | 7.60e-47 | 163 |
MS.gene050975.t1 | AT3G49530 | 51.852 | 162 | 68 | 5 | 46 | 200 | 14 | 172 | 8.54e-45 | 155 |
MS.gene050975.t1 | AT3G49530 | 51.852 | 162 | 68 | 5 | 46 | 200 | 14 | 172 | 1.80e-44 | 155 |
MS.gene050975.t1 | AT5G24590 | 51.282 | 156 | 66 | 5 | 46 | 194 | 14 | 166 | 1.15e-43 | 153 |
MS.gene050975.t1 | AT4G17980 | 47.134 | 157 | 74 | 3 | 46 | 194 | 7 | 162 | 1.38e-43 | 148 |
MS.gene050975.t1 | AT4G01520 | 39.796 | 196 | 106 | 4 | 46 | 229 | 5 | 200 | 1.42e-43 | 149 |
MS.gene050975.t1 | AT4G17980 | 47.134 | 157 | 74 | 3 | 46 | 194 | 7 | 162 | 2.57e-43 | 148 |
MS.gene050975.t1 | AT4G01540 | 48.344 | 151 | 75 | 3 | 47 | 194 | 6 | 156 | 1.16e-42 | 149 |
MS.gene050975.t1 | AT4G01540 | 40.513 | 195 | 104 | 4 | 47 | 229 | 6 | 200 | 1.62e-42 | 149 |
MS.gene050975.t1 | AT1G33060 | 52.941 | 153 | 63 | 5 | 46 | 192 | 25 | 174 | 1.72e-42 | 153 |
MS.gene050975.t1 | AT1G33060 | 52.941 | 153 | 63 | 5 | 46 | 192 | 25 | 174 | 1.81e-42 | 152 |
MS.gene050975.t1 | AT4G01540 | 48.344 | 151 | 75 | 3 | 47 | 194 | 6 | 156 | 2.18e-42 | 149 |
MS.gene050975.t1 | AT4G01540 | 48.344 | 151 | 75 | 3 | 47 | 194 | 6 | 156 | 4.07e-42 | 149 |
MS.gene050975.t1 | AT3G17730 | 42.135 | 178 | 84 | 6 | 46 | 217 | 7 | 171 | 1.07e-40 | 140 |
MS.gene050975.t1 | AT5G17260 | 46.875 | 160 | 73 | 5 | 40 | 192 | 3 | 157 | 8.09e-40 | 143 |
MS.gene050975.t1 | AT3G03200 | 46.875 | 160 | 73 | 5 | 40 | 192 | 3 | 157 | 3.34e-39 | 142 |
MS.gene050975.t1 | AT3G10490 | 45.062 | 162 | 77 | 5 | 48 | 202 | 30 | 186 | 2.35e-38 | 134 |
MS.gene050975.t1 | AT1G65910 | 41.500 | 200 | 91 | 8 | 46 | 225 | 7 | 200 | 4.86e-38 | 140 |
MS.gene050975.t1 | AT3G10480 | 46.053 | 152 | 72 | 4 | 48 | 192 | 30 | 178 | 9.92e-38 | 137 |
MS.gene050975.t1 | AT2G27300 | 42.188 | 192 | 89 | 8 | 24 | 209 | 1 | 176 | 2.75e-37 | 134 |
MS.gene050975.t1 | AT3G10480 | 45.695 | 151 | 73 | 4 | 48 | 192 | 30 | 177 | 4.66e-37 | 135 |
MS.gene050975.t1 | AT3G10490 | 46.053 | 152 | 72 | 4 | 48 | 192 | 30 | 178 | 9.51e-37 | 134 |
MS.gene050975.t1 | AT5G46590 | 46.203 | 158 | 76 | 5 | 46 | 196 | 7 | 162 | 1.20e-36 | 131 |
MS.gene050975.t1 | AT3G10500 | 46.711 | 152 | 72 | 6 | 48 | 193 | 12 | 160 | 2.64e-36 | 135 |
MS.gene050975.t1 | AT5G64060 | 45.455 | 154 | 69 | 5 | 48 | 192 | 9 | 156 | 6.50e-36 | 130 |
MS.gene050975.t1 | AT5G04410 | 45.395 | 152 | 74 | 5 | 48 | 193 | 12 | 160 | 1.46e-35 | 133 |
MS.gene050975.t1 | AT1G69490 | 40.936 | 171 | 84 | 7 | 46 | 204 | 10 | 175 | 2.62e-34 | 124 |
MS.gene050975.t1 | AT3G44290 | 42.593 | 162 | 78 | 6 | 34 | 194 | 11 | 158 | 3.12e-34 | 123 |
MS.gene050975.t1 | AT5G07680 | 44.872 | 156 | 73 | 7 | 46 | 193 | 4 | 154 | 3.42e-34 | 125 |
MS.gene050975.t1 | AT5G07680 | 44.872 | 156 | 73 | 7 | 46 | 193 | 18 | 168 | 3.79e-34 | 125 |
MS.gene050975.t1 | AT1G02230 | 43.226 | 155 | 83 | 4 | 43 | 194 | 1 | 153 | 3.99e-34 | 126 |
MS.gene050975.t1 | AT3G04070 | 39.779 | 181 | 90 | 5 | 46 | 210 | 11 | 188 | 4.86e-34 | 125 |
MS.gene050975.t1 | AT1G01720 | 42.857 | 161 | 76 | 5 | 42 | 192 | 4 | 158 | 9.10e-34 | 123 |
MS.gene050975.t1 | AT5G39610 | 41.317 | 167 | 85 | 7 | 46 | 204 | 21 | 182 | 1.40e-33 | 123 |
MS.gene050975.t1 | AT5G46590 | 48.438 | 128 | 63 | 3 | 46 | 172 | 7 | 132 | 1.49e-33 | 122 |
MS.gene050975.t1 | AT1G32510 | 40.237 | 169 | 87 | 5 | 43 | 199 | 5 | 171 | 1.64e-33 | 122 |
MS.gene050975.t1 | AT5G09330 | 47.020 | 151 | 71 | 5 | 48 | 192 | 9 | 156 | 1.80e-33 | 126 |
MS.gene050975.t1 | AT5G09330 | 47.020 | 151 | 71 | 5 | 48 | 192 | 9 | 156 | 1.80e-33 | 126 |
MS.gene050975.t1 | AT5G09330 | 47.020 | 151 | 71 | 5 | 48 | 192 | 9 | 156 | 1.80e-33 | 126 |
MS.gene050975.t1 | AT5G09330 | 47.020 | 151 | 71 | 5 | 48 | 192 | 9 | 156 | 1.80e-33 | 126 |
MS.gene050975.t1 | AT5G09330 | 47.020 | 151 | 71 | 5 | 48 | 192 | 9 | 156 | 1.80e-33 | 126 |
MS.gene050975.t1 | AT5G08790 | 43.038 | 158 | 73 | 5 | 46 | 192 | 8 | 159 | 1.96e-33 | 122 |
MS.gene050975.t1 | AT3G29035 | 45.395 | 152 | 71 | 6 | 46 | 196 | 25 | 165 | 2.00e-33 | 123 |
MS.gene050975.t1 | AT5G22290 | 41.916 | 167 | 85 | 7 | 31 | 194 | 9 | 166 | 2.19e-33 | 124 |
MS.gene050975.t1 | AT4G27410 | 40.964 | 166 | 81 | 6 | 39 | 195 | 8 | 165 | 2.44e-33 | 122 |
MS.gene050975.t1 | AT3G44290 | 42.593 | 162 | 78 | 6 | 34 | 194 | 11 | 158 | 3.73e-33 | 123 |
MS.gene050975.t1 | AT5G61430 | 43.590 | 156 | 75 | 7 | 46 | 193 | 17 | 167 | 4.69e-33 | 122 |
MS.gene050975.t1 | AT2G24430 | 42.857 | 154 | 80 | 4 | 46 | 194 | 17 | 167 | 5.16e-33 | 122 |
MS.gene050975.t1 | AT2G24430 | 42.857 | 154 | 80 | 4 | 46 | 194 | 17 | 167 | 5.16e-33 | 122 |
MS.gene050975.t1 | AT1G54330 | 44.000 | 150 | 78 | 4 | 46 | 192 | 7 | 153 | 5.32e-33 | 122 |
MS.gene050975.t1 | AT3G15500 | 42.593 | 162 | 78 | 6 | 39 | 192 | 8 | 162 | 5.66e-33 | 122 |
MS.gene050975.t1 | AT5G39820 | 43.796 | 137 | 73 | 3 | 48 | 183 | 23 | 156 | 1.88e-32 | 121 |
MS.gene050975.t1 | AT5G53950 | 48.438 | 128 | 62 | 3 | 46 | 172 | 18 | 142 | 2.05e-32 | 122 |
MS.gene050975.t1 | AT1G52890 | 42.593 | 162 | 78 | 6 | 39 | 192 | 8 | 162 | 2.52e-32 | 120 |
MS.gene050975.t1 | AT3G04070 | 48.092 | 131 | 61 | 4 | 46 | 172 | 11 | 138 | 3.39e-32 | 120 |
MS.gene050975.t1 | AT5G66300 | 43.312 | 157 | 75 | 7 | 44 | 192 | 12 | 162 | 3.59e-32 | 119 |
MS.gene050975.t1 | AT1G76420 | 39.744 | 156 | 86 | 4 | 46 | 196 | 23 | 175 | 1.27e-31 | 119 |
MS.gene050975.t1 | AT2G02450 | 40.659 | 182 | 99 | 6 | 15 | 192 | 22 | 198 | 1.77e-31 | 119 |
MS.gene050975.t1 | AT2G02450 | 40.659 | 182 | 99 | 6 | 15 | 192 | 22 | 198 | 2.13e-31 | 119 |
MS.gene050975.t1 | AT5G63790 | 40.000 | 175 | 86 | 6 | 31 | 192 | 34 | 202 | 2.95e-31 | 117 |
MS.gene050975.t1 | AT3G10480 | 37.838 | 185 | 72 | 5 | 48 | 192 | 30 | 211 | 3.09e-31 | 120 |
MS.gene050975.t1 | AT1G33280 | 45.752 | 153 | 75 | 6 | 44 | 192 | 8 | 156 | 3.34e-31 | 117 |
MS.gene050975.t1 | AT3G15170 | 41.509 | 159 | 81 | 6 | 43 | 193 | 19 | 173 | 3.80e-31 | 117 |
MS.gene050975.t1 | AT1G34190 | 41.447 | 152 | 80 | 4 | 48 | 193 | 19 | 167 | 3.86e-31 | 120 |
MS.gene050975.t1 | AT5G63790 | 40.000 | 175 | 86 | 6 | 31 | 192 | 44 | 212 | 4.26e-31 | 117 |
MS.gene050975.t1 | AT5G04395 | 44.755 | 143 | 65 | 4 | 46 | 175 | 29 | 170 | 7.82e-31 | 113 |
MS.gene050975.t1 | AT3G12910 | 34.951 | 206 | 111 | 6 | 48 | 233 | 24 | 226 | 9.76e-31 | 115 |
MS.gene050975.t1 | AT1G79580 | 45.161 | 155 | 78 | 6 | 42 | 192 | 15 | 166 | 1.13e-30 | 117 |
MS.gene050975.t1 | AT1G79580 | 45.161 | 155 | 78 | 6 | 42 | 192 | 15 | 166 | 1.13e-30 | 117 |
MS.gene050975.t1 | AT1G79580 | 45.161 | 155 | 78 | 6 | 42 | 192 | 15 | 166 | 1.13e-30 | 117 |
MS.gene050975.t1 | AT1G79580 | 45.161 | 155 | 78 | 6 | 42 | 192 | 15 | 166 | 1.13e-30 | 117 |
MS.gene050975.t1 | AT1G79580 | 45.161 | 155 | 78 | 6 | 42 | 192 | 15 | 166 | 1.13e-30 | 117 |
MS.gene050975.t1 | AT1G26870 | 45.455 | 132 | 66 | 4 | 42 | 172 | 15 | 141 | 1.18e-30 | 117 |
MS.gene050975.t1 | AT1G12260 | 42.208 | 154 | 80 | 6 | 44 | 192 | 7 | 156 | 1.33e-30 | 116 |
MS.gene050975.t1 | AT3G15510 | 39.130 | 161 | 78 | 4 | 49 | 192 | 21 | 178 | 1.59e-30 | 116 |
MS.gene050975.t1 | AT4G27410 | 37.569 | 181 | 83 | 6 | 39 | 195 | 8 | 182 | 1.93e-30 | 115 |
MS.gene050975.t1 | AT3G04060 | 41.290 | 155 | 79 | 6 | 46 | 192 | 21 | 171 | 1.95e-30 | 115 |
MS.gene050975.t1 | AT1G62700 | 43.506 | 154 | 78 | 6 | 44 | 192 | 7 | 156 | 3.28e-30 | 116 |
MS.gene050975.t1 | AT1G62700 | 43.506 | 154 | 78 | 6 | 44 | 192 | 7 | 156 | 3.28e-30 | 116 |
MS.gene050975.t1 | AT1G12260 | 42.208 | 154 | 80 | 6 | 44 | 192 | 7 | 156 | 3.54e-30 | 116 |
MS.gene050975.t1 | AT1G61110 | 39.645 | 169 | 80 | 6 | 46 | 196 | 17 | 181 | 3.97e-30 | 114 |
MS.gene050975.t1 | AT3G18400 | 39.216 | 153 | 83 | 5 | 46 | 193 | 6 | 153 | 4.41e-30 | 114 |
MS.gene050975.t1 | AT5G18270 | 45.312 | 128 | 65 | 4 | 46 | 172 | 22 | 145 | 8.61e-30 | 114 |
MS.gene050975.t1 | AT4G10350 | 44.231 | 156 | 76 | 6 | 44 | 192 | 9 | 160 | 9.24e-30 | 114 |
MS.gene050975.t1 | AT5G18270 | 44.531 | 128 | 66 | 4 | 46 | 172 | 22 | 145 | 1.13e-29 | 114 |
MS.gene050975.t1 | AT1G02250 | 41.401 | 157 | 87 | 4 | 43 | 196 | 1 | 155 | 1.18e-29 | 114 |
MS.gene050975.t1 | AT5G62380 | 41.667 | 156 | 78 | 7 | 44 | 192 | 7 | 156 | 1.69e-29 | 113 |
MS.gene050975.t1 | AT5G62380 | 41.667 | 156 | 78 | 7 | 44 | 192 | 7 | 156 | 1.69e-29 | 113 |
MS.gene050975.t1 | AT1G56010 | 36.158 | 177 | 99 | 5 | 46 | 212 | 20 | 192 | 2.21e-29 | 112 |
MS.gene050975.t1 | AT2G33480 | 41.104 | 163 | 78 | 8 | 41 | 195 | 12 | 164 | 2.67e-29 | 111 |
MS.gene050975.t1 | AT4G36160 | 41.558 | 154 | 81 | 6 | 44 | 192 | 10 | 159 | 3.69e-29 | 113 |
MS.gene050975.t1 | AT4G36160 | 41.558 | 154 | 81 | 6 | 44 | 192 | 10 | 159 | 3.69e-29 | 113 |
MS.gene050975.t1 | AT2G18060 | 40.909 | 154 | 82 | 6 | 44 | 192 | 9 | 158 | 3.73e-29 | 113 |
MS.gene050975.t1 | AT2G18060 | 40.909 | 154 | 82 | 6 | 44 | 192 | 9 | 158 | 3.73e-29 | 113 |
MS.gene050975.t1 | AT2G17040 | 39.024 | 164 | 89 | 5 | 48 | 203 | 9 | 169 | 4.01e-29 | 111 |
MS.gene050975.t1 | AT4G36160 | 41.558 | 154 | 81 | 6 | 44 | 192 | 14 | 163 | 4.07e-29 | 113 |
MS.gene050975.t1 | AT1G77450 | 40.385 | 156 | 78 | 5 | 46 | 192 | 11 | 160 | 4.67e-29 | 110 |
MS.gene050975.t1 | AT2G33480 | 42.073 | 164 | 73 | 9 | 41 | 195 | 12 | 162 | 7.09e-29 | 110 |
MS.gene050975.t1 | AT2G43000 | 33.500 | 200 | 114 | 7 | 44 | 229 | 17 | 211 | 1.08e-28 | 110 |
MS.gene050975.t1 | AT1G34180 | 44.444 | 126 | 66 | 3 | 48 | 172 | 19 | 141 | 1.96e-28 | 112 |
MS.gene050975.t1 | AT1G71930 | 38.415 | 164 | 86 | 6 | 34 | 192 | 5 | 158 | 2.54e-28 | 110 |
MS.gene050975.t1 | AT1G71930 | 38.415 | 164 | 86 | 6 | 34 | 192 | 5 | 158 | 2.54e-28 | 110 |
MS.gene050975.t1 | AT1G34180 | 44.444 | 126 | 66 | 3 | 48 | 172 | 19 | 141 | 3.12e-28 | 112 |
MS.gene050975.t1 | AT1G01010 | 40.764 | 157 | 83 | 4 | 47 | 195 | 5 | 159 | 3.27e-28 | 111 |
MS.gene050975.t1 | AT4G28530 | 37.725 | 167 | 85 | 5 | 46 | 195 | 11 | 175 | 4.33e-28 | 110 |
MS.gene050975.t1 | AT3G04420 | 39.735 | 151 | 87 | 4 | 46 | 194 | 4 | 152 | 6.12e-28 | 108 |
MS.gene050975.t1 | AT3G04420 | 39.735 | 151 | 87 | 4 | 46 | 194 | 4 | 152 | 7.48e-28 | 108 |
MS.gene050975.t1 | AT5G22380 | 38.961 | 154 | 82 | 5 | 47 | 189 | 7 | 159 | 1.41e-27 | 105 |
MS.gene050975.t1 | AT5G13180 | 36.196 | 163 | 90 | 6 | 41 | 196 | 11 | 166 | 4.21e-27 | 105 |
MS.gene050975.t1 | AT3G12977 | 34.637 | 179 | 105 | 6 | 46 | 217 | 19 | 192 | 2.74e-26 | 103 |
MS.gene050975.t1 | AT1G02220 | 39.726 | 146 | 83 | 3 | 46 | 190 | 4 | 145 | 4.86e-26 | 105 |
MS.gene050975.t1 | AT3G61910 | 38.462 | 169 | 80 | 7 | 44 | 192 | 11 | 175 | 6.81e-26 | 103 |
MS.gene050975.t1 | AT2G46770 | 33.333 | 219 | 119 | 8 | 31 | 226 | 3 | 217 | 1.53e-25 | 103 |
MS.gene050975.t1 | AT3G44350 | 35.256 | 156 | 91 | 4 | 47 | 193 | 7 | 161 | 1.72e-25 | 100 |
MS.gene050975.t1 | AT1G34180 | 40.580 | 138 | 66 | 4 | 48 | 172 | 19 | 153 | 1.95e-25 | 103 |
MS.gene050975.t1 | AT1G34180 | 40.580 | 138 | 66 | 4 | 48 | 172 | 19 | 153 | 2.66e-25 | 104 |
MS.gene050975.t1 | AT3G44350 | 38.760 | 129 | 75 | 3 | 47 | 172 | 7 | 134 | 9.70e-25 | 96.7 |
MS.gene050975.t1 | AT1G32770 | 39.157 | 166 | 80 | 7 | 44 | 192 | 16 | 177 | 1.56e-24 | 100 |
MS.gene050975.t1 | AT1G32870 | 40.909 | 154 | 78 | 6 | 48 | 193 | 13 | 161 | 1.79e-24 | 101 |
MS.gene050975.t1 | AT1G32870 | 40.909 | 154 | 78 | 6 | 48 | 193 | 13 | 161 | 2.11e-24 | 101 |
MS.gene050975.t1 | AT1G32870 | 40.909 | 154 | 78 | 6 | 48 | 193 | 49 | 197 | 2.83e-24 | 101 |
MS.gene050975.t1 | AT1G52880 | 39.264 | 163 | 74 | 5 | 49 | 192 | 21 | 177 | 4.46e-24 | 98.6 |
MS.gene050975.t1 | AT3G04430 | 41.481 | 135 | 63 | 5 | 51 | 173 | 6 | 136 | 4.64e-22 | 90.5 |
MS.gene050975.t1 | AT5G64530 | 37.984 | 129 | 62 | 6 | 46 | 172 | 4 | 116 | 1.13e-20 | 85.9 |
MS.gene050975.t1 | AT5G64530 | 37.984 | 129 | 62 | 6 | 46 | 172 | 4 | 116 | 1.38e-20 | 86.3 |
MS.gene050975.t1 | AT4G28530 | 40.741 | 108 | 47 | 3 | 46 | 138 | 11 | 116 | 4.25e-17 | 79.3 |
MS.gene050975.t1 | AT3G12977 | 35.246 | 122 | 70 | 4 | 103 | 217 | 20 | 139 | 1.11e-15 | 73.9 |
MS.gene050975.t1 | AT1G56010 | 35.000 | 120 | 66 | 4 | 103 | 212 | 8 | 125 | 2.26e-15 | 73.9 |
MS.gene050975.t1 | AT5G61430 | 37.736 | 106 | 56 | 5 | 96 | 193 | 1 | 104 | 3.16e-15 | 73.6 |
MS.gene050975.t1 | AT4G10350 | 41.667 | 96 | 48 | 3 | 103 | 192 | 20 | 113 | 1.69e-14 | 71.6 |
MS.gene050975.t1 | AT2G33480 | 38.835 | 103 | 52 | 5 | 101 | 195 | 8 | 107 | 3.52e-14 | 69.7 |
MS.gene050975.t1 | AT3G10490 | 42.500 | 80 | 37 | 3 | 120 | 192 | 1 | 78 | 5.44e-12 | 65.1 |
MS.gene050975.t1 | AT3G10490 | 42.500 | 80 | 37 | 3 | 120 | 192 | 1 | 78 | 5.44e-12 | 65.1 |
Find 50 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGATTCCATATTTATTTC+TGG | 0.145339 | 8.1:+76878363 | None:intergenic |
CTTAATCCCAATTACTTTAT+CGG | 0.240432 | 8.1:+76879590 | None:intergenic |
AGGGGTACCGATAAAGTAAT+TGG | 0.247166 | 8.1:-76879597 | MS.gene050975:CDS |
ACAAGTATGCAAAGAGTAAA+AGG | 0.277265 | 8.1:-76879683 | MS.gene050975:CDS |
TACCAAGCAACTTGTTTCTA+AGG | 0.299622 | 8.1:+76879917 | None:intergenic |
CAAAGAGTAAAAGGATTAAT+AGG | 0.325883 | 8.1:-76879674 | MS.gene050975:CDS |
ATTCTTCTTGTTCCTCCTGT+TGG | 0.344603 | 8.1:-76879982 | MS.gene050975:CDS |
GGACCGTAACATTAGGATTA+GGG | 0.353719 | 8.1:-76879616 | MS.gene050975:CDS |
TGGACCGTAACATTAGGATT+AGG | 0.356604 | 8.1:-76879617 | MS.gene050975:CDS |
TACTTTGCCAGAAATAAATA+TGG | 0.372071 | 8.1:-76878370 | MS.gene050975:CDS |
TTTGCATACTTGTATTTAAG+AGG | 0.376065 | 8.1:+76879693 | None:intergenic |
TTCCTGCTGTTAAGACCAAT+TGG | 0.414210 | 8.1:-76879539 | MS.gene050975:CDS |
CTGGAATGGACCGTAACATT+AGG | 0.419403 | 8.1:-76879623 | MS.gene050975:CDS |
TTATATCTGTTTCAGGTAAG+TGG | 0.441842 | 8.1:-76878393 | MS.gene050975:intron |
TTGGTCTTAACAGCAGGAAC+AGG | 0.452752 | 8.1:+76879543 | None:intergenic |
TACCTTAGAAACAAGTTGCT+TGG | 0.466831 | 8.1:-76879919 | MS.gene050975:CDS |
AATAAAATTGAAGAGGAAGC+TGG | 0.471203 | 8.1:-76878591 | MS.gene050975:CDS |
CTGATTAGCTCTTCATCTGT+TGG | 0.480022 | 8.1:+76879946 | None:intergenic |
AACAGGAGGAACAAGAAGAA+TGG | 0.482221 | 8.1:+76879984 | None:intergenic |
AGTGATAAAGTCTGATGATC+CGG | 0.483678 | 8.1:-76879733 | MS.gene050975:CDS |
GGACAAAATCTGAATCCAAC+AGG | 0.487685 | 8.1:+76879967 | None:intergenic |
ATACTCATGAATGATCCAAT+TGG | 0.492502 | 8.1:+76879524 | None:intergenic |
ATCCAATTGGTCTTAACAGC+AGG | 0.496718 | 8.1:+76879537 | None:intergenic |
GGGGTACCGATAAAGTAATT+GGG | 0.496956 | 8.1:-76879596 | MS.gene050975:CDS |
TACCCCTAATCCTAATGTTA+CGG | 0.500164 | 8.1:+76879613 | None:intergenic |
GATACAATGATGTGTGATGA+AGG | 0.510656 | 8.1:-76880042 | MS.gene050975:CDS |
AAATATGGAATCAATATTTG+AGG | 0.513860 | 8.1:-76878355 | None:intergenic |
AGCTGAGAATAAAATTGAAG+AGG | 0.521031 | 8.1:-76878598 | MS.gene050975:CDS |
TATTTACCTGGTAATTCCCA+TGG | 0.526381 | 8.1:+76879841 | None:intergenic |
AAGAAGAATGGGAGGAAATG+AGG | 0.527793 | 8.1:+76879996 | None:intergenic |
ACAGGAGGAACAAGAAGAAT+GGG | 0.530636 | 8.1:+76879985 | None:intergenic |
GAGGCTGTCATTTGTCTGCT+AGG | 0.534597 | 8.1:+76880015 | None:intergenic |
TCTCAGCTTTCTTAATCAAG+CGG | 0.544897 | 8.1:+76878613 | None:intergenic |
TGCCACCCTTGAGGATCACC+AGG | 0.553191 | 8.1:-76879496 | MS.gene050975:intron |
TATTCGCAAGTTCGAACCAT+GGG | 0.571075 | 8.1:-76879857 | MS.gene050975:CDS |
AACAAACCTGGTGATCCTCA+AGG | 0.591442 | 8.1:+76879490 | None:intergenic |
GGTATGATTATATGTGATGA+AGG | 0.595939 | 8.1:-76878570 | MS.gene050975:CDS |
ACAAACCTGGTGATCCTCAA+GGG | 0.612386 | 8.1:+76879491 | None:intergenic |
GAAAATCAAGAAACAGCTGA+AGG | 0.619282 | 8.1:-76878516 | MS.gene050975:CDS |
AGCCGAGATAAAAGGCGAAG+AGG | 0.620211 | 8.1:-76880070 | MS.gene050975:CDS |
GGAGGAACAAGAAGAATGGG+AGG | 0.625065 | 8.1:+76879988 | None:intergenic |
ATACAATGATGTGTGATGAA+GGG | 0.629056 | 8.1:-76880041 | MS.gene050975:CDS |
TACAATGATGTGTGATGAAG+GGG | 0.629065 | 8.1:-76880040 | MS.gene050975:CDS |
TTCGAACCATGGGAATTACC+AGG | 0.630326 | 8.1:-76879847 | MS.gene050975:intron |
TAAAGTCTGATGATCCGGAA+TGG | 0.638005 | 8.1:-76879728 | MS.gene050975:CDS |
GTATCATGATGCCACCCTTG+AGG | 0.648016 | 8.1:-76879505 | MS.gene050975:CDS |
ATATTCGCAAGTTCGAACCA+TGG | 0.658646 | 8.1:-76879858 | MS.gene050975:CDS |
GACCGTAACATTAGGATTAG+GGG | 0.672366 | 8.1:-76879615 | MS.gene050975:CDS |
AACCTGGTGATCCTCAAGGG+TGG | 0.685631 | 8.1:+76879494 | None:intergenic |
CAAAATCTGAATCCAACAGG+AGG | 0.690195 | 8.1:+76879970 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTGTTTTATATATTTACC+TGG | + | chr8.1:76878633-76878652 | None:intergenic | 15.0% |
!! | AATATGACACTAAAAGAAAA+AGG | + | chr8.1:76879197-76879216 | None:intergenic | 20.0% |
!! | AATATGGAATCAATATTTGA+AGG | - | chr8.1:76880105-76880124 | MS.gene050975:CDS | 20.0% |
!! | AGTTCAAAGTTAGTTATAAT+TGG | + | chr8.1:76879354-76879373 | None:intergenic | 20.0% |
!! | ATATGACACTAAAAGAAAAA+GGG | + | chr8.1:76879196-76879215 | None:intergenic | 20.0% |
!! | ATTAATAGGACAACAAAAAA+TGG | - | chr8.1:76878799-76878818 | MS.gene050975:intron | 20.0% |
!! | TGATATATTTCTTATCTGAT+AGG | - | chr8.1:76879115-76879134 | MS.gene050975:intron | 20.0% |
!!! | ATTGATTCCATATTTATTTC+TGG | + | chr8.1:76880099-76880118 | None:intergenic | 20.0% |
!!! | CATTTTATAATGTCTCATAT+TGG | + | chr8.1:76879785-76879804 | None:intergenic | 20.0% |
!!! | CTCAAATTGGTTTTATTTTA+TGG | - | chr8.1:76879482-76879501 | MS.gene050975:intron | 20.0% |
!!! | TTTTGTGTCAAAATAATGAT+GGG | + | chr8.1:76878664-76878683 | None:intergenic | 20.0% |
!!! | TTTTTGTGTCAAAATAATGA+TGG | + | chr8.1:76878665-76878684 | None:intergenic | 20.0% |
! | AACAAAGAAATCTCAGATAT+TGG | - | chr8.1:76879245-76879264 | MS.gene050975:intron | 25.0% |
! | AGAATTTCACTTTGTAATCT+CGG | - | chr8.1:76879744-76879763 | MS.gene050975:intron | 25.0% |
! | CAAAGAGTAAAAGGATTAAT+AGG | - | chr8.1:76878785-76878804 | MS.gene050975:intron | 25.0% |
! | CTTAATCCCAATTACTTTAT+CGG | + | chr8.1:76878872-76878891 | None:intergenic | 25.0% |
! | TAAATGTAACATAACAAACC+TGG | + | chr8.1:76878984-76879003 | None:intergenic | 25.0% |
! | TACTTTGCCAGAAATAAATA+TGG | - | chr8.1:76880089-76880108 | MS.gene050975:CDS | 25.0% |
! | TATGACACTAAAAGAAAAAG+GGG | + | chr8.1:76879195-76879214 | None:intergenic | 25.0% |
! | TTTGCATACTTGTATTTAAG+AGG | + | chr8.1:76878769-76878788 | None:intergenic | 25.0% |
!! | GAATTTTCAAAACTAAGTCT+TGG | - | chr8.1:76879998-76880017 | MS.gene050975:CDS | 25.0% |
!!! | AACTTTGAACTAGCTTATTT+TGG | - | chr8.1:76879363-76879382 | MS.gene050975:intron | 25.0% |
!!! | AATTTCAGATTTTGAAGCAT+TGG | - | chr8.1:76879642-76879661 | MS.gene050975:CDS | 25.0% |
!!! | ACTTGTTTTATATCTGTTTC+AGG | - | chr8.1:76880059-76880078 | MS.gene050975:CDS | 25.0% |
!!! | AGTTTTGAAAATTCCTATCA+AGG | + | chr8.1:76879992-76880011 | None:intergenic | 25.0% |
!!! | GGTTTGTTATGTTACATTTA+AGG | - | chr8.1:76878984-76879003 | MS.gene050975:intron | 25.0% |
!!! | TGTATGTGTTTTTTTCTTTC+AGG | - | chr8.1:76879089-76879108 | MS.gene050975:intron | 25.0% |
!!! | TTCTGAAATTTGAAGATGAT+TGG | - | chr8.1:76879141-76879160 | MS.gene050975:intron | 25.0% |
AAAACTAAAAAAGAGTGGCT+TGG | + | chr8.1:76879602-76879621 | None:intergenic | 30.0% | |
AATAAAATTGAAGAGGAAGC+TGG | - | chr8.1:76879868-76879887 | MS.gene050975:CDS | 30.0% | |
AATTCTTATCATGCATCTCA+TGG | + | chr8.1:76879730-76879749 | None:intergenic | 30.0% | |
ACAAGTATGCAAAGAGTAAA+AGG | - | chr8.1:76878776-76878795 | MS.gene050975:intron | 30.0% | |
ACCAGTAGAATATGTATAAG+AGG | + | chr8.1:76879460-76879479 | None:intergenic | 30.0% | |
AGCTGAGAATAAAATTGAAG+AGG | - | chr8.1:76879861-76879880 | MS.gene050975:CDS | 30.0% | |
ATACAATGATGTGTGATGAA+GGG | - | chr8.1:76878418-76878437 | MS.gene050975:intron | 30.0% | |
ATACTCATGAATGATCCAAT+TGG | + | chr8.1:76878938-76878957 | None:intergenic | 30.0% | |
ATATACAAGTGAAAAGAGCT+AGG | - | chr8.1:76879309-76879328 | MS.gene050975:intron | 30.0% | |
ATGAAAAAAGCCGAGATAAA+AGG | - | chr8.1:76878381-76878400 | MS.gene050975:CDS | 30.0% | |
CAAAAGTCCTCTACAAAATT+TGG | + | chr8.1:76879819-76879838 | None:intergenic | 30.0% | |
CAGCAAAAACTAAAAAAGAG+TGG | + | chr8.1:76879607-76879626 | None:intergenic | 30.0% | |
GGATAATACTAGTAAACAAC+AGG | + | chr8.1:76879439-76879458 | None:intergenic | 30.0% | |
GGTATGATTATATGTGATGA+AGG | - | chr8.1:76879889-76879908 | MS.gene050975:CDS | 30.0% | |
TCCTCTTATACATATTCTAC+TGG | - | chr8.1:76879456-76879475 | MS.gene050975:intron | 30.0% | |
TTTCTTTGTTCATTTCTCTC+TGG | + | chr8.1:76879235-76879254 | None:intergenic | 30.0% | |
! | GGACAACAAAAAATGGTTTT+TGG | - | chr8.1:76878806-76878825 | MS.gene050975:intron | 30.0% |
! | TCAGCATGTTTTATGTTGAA+AGG | + | chr8.1:76880031-76880050 | None:intergenic | 30.0% |
! | TCTTTTAGTGTCATATTGTG+AGG | - | chr8.1:76879200-76879219 | MS.gene050975:intron | 30.0% |
! | TTATATCTGTTTCAGGTAAG+TGG | - | chr8.1:76880066-76880085 | MS.gene050975:CDS | 30.0% |
! | TTATCCTCCAAATTTTGTAG+AGG | - | chr8.1:76879809-76879828 | MS.gene050975:intron | 30.0% |
!! | ATTCTACTGGTTTCTCAAAT+TGG | - | chr8.1:76879469-76879488 | MS.gene050975:intron | 30.0% |
AAGTCCTCTACAAAATTTGG+AGG | + | chr8.1:76879816-76879835 | None:intergenic | 35.0% | |
AGTGATAAAGTCTGATGATC+CGG | - | chr8.1:76878726-76878745 | MS.gene050975:intron | 35.0% | |
ATAGCAGAAAAAGACAGTGA+TGG | + | chr8.1:76879514-76879533 | None:intergenic | 35.0% | |
GAAAATCAAGAAACAGCTGA+AGG | - | chr8.1:76879943-76879962 | MS.gene050975:CDS | 35.0% | |
GATACAATGATGTGTGATGA+AGG | - | chr8.1:76878417-76878436 | MS.gene050975:intron | 35.0% | |
GCATACACATAAATACCAAG+AGG | + | chr8.1:76879679-76879698 | None:intergenic | 35.0% | |
TACAATGATGTGTGATGAAG+GGG | - | chr8.1:76878419-76878438 | MS.gene050975:intron | 35.0% | |
TACCCCTAATCCTAATGTTA+CGG | + | chr8.1:76878849-76878868 | None:intergenic | 35.0% | |
TACCTTAGAAACAAGTTGCT+TGG | - | chr8.1:76878540-76878559 | MS.gene050975:CDS | 35.0% | |
TATTTACCTGGTAATTCCCA+TGG | + | chr8.1:76878621-76878640 | None:intergenic | 35.0% | |
TCTCAGCTTTCTTAATCAAG+CGG | + | chr8.1:76879849-76879868 | None:intergenic | 35.0% | |
TTATCATGCATCTCATGGAT+CGG | + | chr8.1:76879725-76879744 | None:intergenic | 35.0% | |
!! | AATGGTTTTTGGAAAGCTAC+TGG | - | chr8.1:76878817-76878836 | MS.gene050975:intron | 35.0% |
!! | TACCAAGCAACTTGTTTCTA+AGG | + | chr8.1:76878545-76878564 | None:intergenic | 35.0% |
!! | TTTGAAGCATTGGCTTGATT+TGG | - | chr8.1:76879652-76879671 | MS.gene050975:CDS | 35.0% |
!! | TTTTTGGAAAGCTACTGGAA+TGG | - | chr8.1:76878822-76878841 | MS.gene050975:intron | 35.0% |
AACAGGAGGAACAAGAAGAA+TGG | + | chr8.1:76878478-76878497 | None:intergenic | 40.0% | |
AAGAAGAATGGGAGGAAATG+AGG | + | chr8.1:76878466-76878485 | None:intergenic | 40.0% | |
ACAGGAGGAACAAGAAGAAT+GGG | + | chr8.1:76878477-76878496 | None:intergenic | 40.0% | |
ATATTCGCAAGTTCGAACCA+TGG | - | chr8.1:76878601-76878620 | MS.gene050975:CDS | 40.0% | |
ATTCTTCTTGTTCCTCCTGT+TGG | - | chr8.1:76878477-76878496 | MS.gene050975:intron | 40.0% | |
CAAAATCTGAATCCAACAGG+AGG | + | chr8.1:76878492-76878511 | None:intergenic | 40.0% | |
GACCGTAACATTAGGATTAG+GGG | - | chr8.1:76878844-76878863 | MS.gene050975:intron | 40.0% | |
GGACAAAATCTGAATCCAAC+AGG | + | chr8.1:76878495-76878514 | None:intergenic | 40.0% | |
GGACACACAAAAAACCATTC+CGG | + | chr8.1:76878748-76878767 | None:intergenic | 40.0% | |
GGACCGTAACATTAGGATTA+GGG | - | chr8.1:76878843-76878862 | MS.gene050975:intron | 40.0% | |
GTAAGCAGTTCATCCTTGAT+AGG | - | chr8.1:76879976-76879995 | MS.gene050975:CDS | 40.0% | |
TAAAGTCTGATGATCCGGAA+TGG | - | chr8.1:76878731-76878750 | MS.gene050975:intron | 40.0% | |
TATTCGCAAGTTCGAACCAT+GGG | - | chr8.1:76878602-76878621 | MS.gene050975:CDS | 40.0% | |
TGGACCGTAACATTAGGATT+AGG | - | chr8.1:76878842-76878861 | MS.gene050975:intron | 40.0% | |
TTCCTGCTGTTAAGACCAAT+TGG | - | chr8.1:76878920-76878939 | MS.gene050975:intron | 40.0% | |
! | CTGATTAGCTCTTCATCTGT+TGG | + | chr8.1:76878516-76878535 | None:intergenic | 40.0% |
! | TTCCTCTTCGCCTTTTATCT+CGG | + | chr8.1:76878394-76878413 | None:intergenic | 40.0% |
!! | AGGGGTACCGATAAAGTAAT+TGG | - | chr8.1:76878862-76878881 | MS.gene050975:intron | 40.0% |
!! | ATCCAATTGGTCTTAACAGC+AGG | + | chr8.1:76878925-76878944 | None:intergenic | 40.0% |
!! | GGGGTACCGATAAAGTAATT+GGG | - | chr8.1:76878863-76878882 | MS.gene050975:intron | 40.0% |
AACAAACCTGGTGATCCTCA+AGG | + | chr8.1:76878972-76878991 | None:intergenic | 45.0% | |
ACAAACCTGGTGATCCTCAA+GGG | + | chr8.1:76878971-76878990 | None:intergenic | 45.0% | |
CTGGAATGGACCGTAACATT+AGG | - | chr8.1:76878836-76878855 | MS.gene050975:intron | 45.0% | |
GTGAAAAGAGCTAGGTGACT+TGG | - | chr8.1:76879317-76879336 | MS.gene050975:intron | 45.0% | |
TTCGAACCATGGGAATTACC+AGG | - | chr8.1:76878612-76878631 | MS.gene050975:CDS | 45.0% | |
! | CAGCAGGAACAGGATTTTCA+TGG | + | chr8.1:76878909-76878928 | None:intergenic | 45.0% |
!! | TTGGCTTGATTTGGACCTCT+TGG | - | chr8.1:76879661-76879680 | MS.gene050975:CDS | 45.0% |
!! | TTGGTCTTAACAGCAGGAAC+AGG | + | chr8.1:76878919-76878938 | None:intergenic | 45.0% |
AGCCGAGATAAAAGGCGAAG+AGG | - | chr8.1:76878389-76878408 | MS.gene050975:intron | 50.0% | |
GGAGGAACAAGAAGAATGGG+AGG | + | chr8.1:76878474-76878493 | None:intergenic | 50.0% | |
GTATCATGATGCCACCCTTG+AGG | - | chr8.1:76878954-76878973 | MS.gene050975:intron | 50.0% | |
! | GAGGCTGTCATTTGTCTGCT+AGG | + | chr8.1:76878447-76878466 | None:intergenic | 50.0% |
AACCTGGTGATCCTCAAGGG+TGG | + | chr8.1:76878968-76878987 | None:intergenic | 55.0% | |
TGCCACCCTTGAGGATCACC+AGG | - | chr8.1:76878963-76878982 | MS.gene050975:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 76878357 | 76880124 | 76878357 | ID=MS.gene050975 |
chr8.1 | mRNA | 76878357 | 76880124 | 76878357 | ID=MS.gene050975.t1;Parent=MS.gene050975 |
chr8.1 | exon | 76879848 | 76880124 | 76879848 | ID=MS.gene050975.t1.exon1;Parent=MS.gene050975.t1 |
chr8.1 | CDS | 76879848 | 76880124 | 76879848 | ID=cds.MS.gene050975.t1;Parent=MS.gene050975.t1 |
chr8.1 | exon | 76879497 | 76879762 | 76879497 | ID=MS.gene050975.t1.exon2;Parent=MS.gene050975.t1 |
chr8.1 | CDS | 76879497 | 76879762 | 76879497 | ID=cds.MS.gene050975.t1;Parent=MS.gene050975.t1 |
chr8.1 | exon | 76878499 | 76878652 | 76878499 | ID=MS.gene050975.t1.exon3;Parent=MS.gene050975.t1 |
chr8.1 | CDS | 76878499 | 76878652 | 76878499 | ID=cds.MS.gene050975.t1;Parent=MS.gene050975.t1 |
chr8.1 | exon | 76878357 | 76878400 | 76878357 | ID=MS.gene050975.t1.exon4;Parent=MS.gene050975.t1 |
chr8.1 | CDS | 76878357 | 76878400 | 76878357 | ID=cds.MS.gene050975.t1;Parent=MS.gene050975.t1 |
Gene Sequence |
Protein sequence |