Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050983.t1 | XP_013444514.1 | 87.7 | 391 | 43 | 1 | 46 | 436 | 15 | 400 | 3.50E-195 | 691 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050983.t1 | F4JN35 | 59.1 | 154 | 54 | 4 | 46 | 193 | 13 | 163 | 7.4e-45 | 183.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050983.t1 | G7ZZI3 | 87.7 | 391 | 43 | 1 | 46 | 436 | 15 | 400 | 2.5e-195 | 691.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050983.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050983.t1 | MTR_8g023840 | 87.724 | 391 | 43 | 1 | 46 | 436 | 15 | 400 | 0.0 | 696 |
MS.gene050983.t1 | MTR_8g023860 | 63.981 | 422 | 101 | 6 | 46 | 434 | 16 | 419 | 1.86e-179 | 507 |
MS.gene050983.t1 | MTR_8g023930 | 66.667 | 273 | 88 | 2 | 46 | 316 | 28 | 299 | 7.08e-126 | 373 |
MS.gene050983.t1 | MTR_8g023900 | 64.158 | 279 | 93 | 2 | 46 | 322 | 197 | 470 | 8.61e-125 | 370 |
MS.gene050983.t1 | MTR_8g023900 | 71.176 | 170 | 47 | 2 | 46 | 213 | 16 | 185 | 1.65e-81 | 259 |
MS.gene050983.t1 | MTR_8g023880 | 43.165 | 278 | 120 | 9 | 46 | 309 | 11 | 264 | 3.58e-54 | 182 |
MS.gene050983.t1 | MTR_3g093040 | 54.762 | 168 | 63 | 6 | 46 | 207 | 112 | 272 | 2.17e-52 | 178 |
MS.gene050983.t1 | MTR_5g069030 | 57.516 | 153 | 56 | 4 | 46 | 192 | 29 | 178 | 5.79e-50 | 179 |
MS.gene050983.t1 | MTR_3g093050 | 55.769 | 156 | 60 | 5 | 46 | 195 | 26 | 178 | 2.54e-49 | 177 |
MS.gene050983.t1 | MTR_3g093050 | 55.769 | 156 | 60 | 5 | 46 | 195 | 26 | 178 | 8.10e-49 | 176 |
MS.gene050983.t1 | MTR_2g086880 | 36.808 | 307 | 163 | 12 | 46 | 336 | 22 | 313 | 2.38e-43 | 159 |
MS.gene050983.t1 | MTR_2g086880 | 36.808 | 307 | 163 | 12 | 46 | 336 | 22 | 313 | 4.26e-43 | 160 |
MS.gene050983.t1 | MTR_6g477900 | 52.000 | 150 | 63 | 5 | 46 | 189 | 10 | 156 | 3.95e-42 | 149 |
MS.gene050983.t1 | MTR_5g014300 | 48.765 | 162 | 70 | 5 | 46 | 197 | 10 | 168 | 2.47e-41 | 150 |
MS.gene050983.t1 | MTR_3g064580 | 45.178 | 197 | 95 | 7 | 46 | 233 | 10 | 202 | 1.38e-40 | 154 |
MS.gene050983.t1 | MTR_2g064090 | 49.007 | 151 | 67 | 4 | 46 | 189 | 10 | 157 | 2.53e-40 | 147 |
MS.gene050983.t1 | MTR_5g076850 | 50.331 | 151 | 66 | 4 | 46 | 190 | 10 | 157 | 1.27e-39 | 150 |
MS.gene050983.t1 | MTR_4g098630 | 41.063 | 207 | 101 | 6 | 46 | 234 | 10 | 213 | 2.29e-39 | 144 |
MS.gene050983.t1 | MTR_1g090723 | 50.000 | 150 | 68 | 3 | 46 | 190 | 12 | 159 | 1.01e-38 | 147 |
MS.gene050983.t1 | MTR_1g090723 | 50.000 | 150 | 68 | 3 | 46 | 190 | 12 | 159 | 1.38e-38 | 147 |
MS.gene050983.t1 | MTR_2g080010 | 41.206 | 199 | 105 | 7 | 46 | 241 | 19 | 208 | 2.51e-38 | 142 |
MS.gene050983.t1 | MTR_1g090723 | 49.020 | 153 | 66 | 4 | 46 | 190 | 12 | 160 | 8.03e-38 | 145 |
MS.gene050983.t1 | MTR_3g096140 | 41.489 | 188 | 95 | 7 | 46 | 226 | 11 | 190 | 2.74e-37 | 137 |
MS.gene050983.t1 | MTR_7g085220 | 40.000 | 215 | 92 | 10 | 46 | 237 | 12 | 212 | 2.74e-37 | 139 |
MS.gene050983.t1 | MTR_3g096140 | 41.489 | 188 | 95 | 7 | 46 | 226 | 11 | 190 | 2.28e-36 | 137 |
MS.gene050983.t1 | MTR_8g063550 | 43.333 | 150 | 76 | 4 | 46 | 189 | 10 | 156 | 4.52e-36 | 135 |
MS.gene050983.t1 | MTR_4g089135 | 48.175 | 137 | 67 | 3 | 46 | 181 | 19 | 152 | 1.09e-35 | 135 |
MS.gene050983.t1 | MTR_8g063550 | 43.333 | 150 | 76 | 4 | 46 | 189 | 10 | 156 | 1.13e-35 | 137 |
MS.gene050983.t1 | MTR_3g096920 | 48.077 | 156 | 66 | 6 | 46 | 192 | 11 | 160 | 1.99e-35 | 133 |
MS.gene050983.t1 | MTR_3g109340 | 48.993 | 149 | 69 | 5 | 46 | 190 | 26 | 171 | 2.28e-35 | 134 |
MS.gene050983.t1 | MTR_2157s0010 | 52.381 | 126 | 55 | 4 | 46 | 169 | 12 | 134 | 4.09e-35 | 131 |
MS.gene050983.t1 | MTR_8g063550 | 43.333 | 150 | 76 | 4 | 46 | 189 | 10 | 156 | 8.77e-35 | 134 |
MS.gene050983.t1 | MTR_8g467490 | 40.606 | 165 | 80 | 4 | 46 | 195 | 18 | 179 | 9.07e-35 | 133 |
MS.gene050983.t1 | MTR_0036s0150 | 48.000 | 150 | 71 | 3 | 46 | 190 | 9 | 156 | 1.78e-34 | 135 |
MS.gene050983.t1 | MTR_7g005280 | 43.478 | 161 | 81 | 4 | 46 | 202 | 19 | 173 | 1.98e-34 | 129 |
MS.gene050983.t1 | MTR_3g070030 | 54.400 | 125 | 51 | 5 | 46 | 169 | 23 | 142 | 2.73e-34 | 131 |
MS.gene050983.t1 | MTR_3g109340 | 49.333 | 150 | 68 | 6 | 46 | 190 | 26 | 172 | 3.00e-34 | 131 |
MS.gene050983.t1 | MTR_3g088110 | 42.771 | 166 | 80 | 5 | 46 | 202 | 11 | 170 | 3.05e-34 | 129 |
MS.gene050983.t1 | MTR_2g079990 | 46.104 | 154 | 64 | 6 | 46 | 189 | 20 | 164 | 4.04e-34 | 130 |
MS.gene050983.t1 | MTR_8g094580 | 44.099 | 161 | 66 | 6 | 46 | 192 | 11 | 161 | 5.60e-34 | 129 |
MS.gene050983.t1 | MTR_3g435150 | 47.059 | 153 | 68 | 6 | 46 | 190 | 20 | 167 | 5.99e-34 | 129 |
MS.gene050983.t1 | MTR_2g078700 | 53.968 | 126 | 54 | 3 | 46 | 170 | 27 | 149 | 6.27e-34 | 131 |
MS.gene050983.t1 | MTR_7g011130 | 56.000 | 125 | 49 | 5 | 47 | 170 | 24 | 143 | 8.15e-34 | 130 |
MS.gene050983.t1 | MTR_4g108760 | 52.381 | 126 | 54 | 5 | 46 | 170 | 21 | 141 | 1.20e-33 | 129 |
MS.gene050983.t1 | MTR_3g096920 | 51.908 | 131 | 56 | 4 | 46 | 175 | 11 | 135 | 1.45e-33 | 129 |
MS.gene050983.t1 | MTR_5g012080 | 44.667 | 150 | 75 | 5 | 46 | 189 | 11 | 158 | 1.88e-33 | 129 |
MS.gene050983.t1 | MTR_4g036030 | 46.000 | 150 | 71 | 6 | 46 | 189 | 11 | 156 | 2.15e-33 | 129 |
MS.gene050983.t1 | MTR_6g084430 | 45.223 | 157 | 75 | 6 | 46 | 196 | 9 | 160 | 2.23e-33 | 128 |
MS.gene050983.t1 | MTR_4g081870 | 44.937 | 158 | 64 | 6 | 46 | 189 | 13 | 161 | 3.23e-33 | 126 |
MS.gene050983.t1 | MTR_1g097300 | 52.206 | 136 | 59 | 4 | 46 | 180 | 23 | 153 | 3.51e-33 | 132 |
MS.gene050983.t1 | MTR_1g090720 | 46.835 | 158 | 65 | 5 | 46 | 189 | 46 | 198 | 3.53e-33 | 130 |
MS.gene050983.t1 | MTR_2g093810 | 39.655 | 174 | 94 | 5 | 46 | 218 | 18 | 181 | 6.27e-33 | 127 |
MS.gene050983.t1 | MTR_5g040420 | 35.323 | 201 | 113 | 4 | 46 | 232 | 18 | 215 | 8.06e-33 | 128 |
MS.gene050983.t1 | MTR_4g035590 | 46.622 | 148 | 72 | 5 | 46 | 189 | 12 | 156 | 1.26e-32 | 127 |
MS.gene050983.t1 | MTR_8g093580 | 42.000 | 150 | 78 | 4 | 46 | 189 | 10 | 156 | 1.32e-32 | 129 |
MS.gene050983.t1 | MTR_7g011120 | 55.200 | 125 | 50 | 5 | 47 | 170 | 13 | 132 | 1.62e-32 | 125 |
MS.gene050983.t1 | MTR_6g012670 | 47.651 | 149 | 66 | 5 | 46 | 193 | 24 | 161 | 2.09e-32 | 125 |
MS.gene050983.t1 | MTR_8g059170 | 43.558 | 163 | 71 | 6 | 46 | 196 | 18 | 171 | 2.18e-32 | 125 |
MS.gene050983.t1 | MTR_8g099750 | 42.105 | 152 | 72 | 4 | 46 | 186 | 18 | 164 | 2.55e-32 | 122 |
MS.gene050983.t1 | MTR_1g008740 | 44.000 | 150 | 77 | 3 | 46 | 190 | 17 | 164 | 3.18e-32 | 125 |
MS.gene050983.t1 | MTR_1g008740 | 44.000 | 150 | 77 | 3 | 46 | 190 | 31 | 178 | 3.71e-32 | 125 |
MS.gene050983.t1 | MTR_2g079990 | 50.400 | 125 | 56 | 4 | 46 | 169 | 20 | 139 | 4.70e-32 | 125 |
MS.gene050983.t1 | MTR_6g011860 | 47.727 | 132 | 64 | 4 | 46 | 176 | 19 | 146 | 8.12e-32 | 125 |
MS.gene050983.t1 | MTR_4g134460 | 43.709 | 151 | 73 | 6 | 46 | 190 | 58 | 202 | 9.74e-32 | 125 |
MS.gene050983.t1 | MTR_4g075980 | 35.043 | 234 | 132 | 8 | 46 | 265 | 19 | 246 | 1.38e-31 | 122 |
MS.gene050983.t1 | MTR_8g076110 | 42.282 | 149 | 78 | 5 | 46 | 189 | 10 | 155 | 1.49e-31 | 122 |
MS.gene050983.t1 | MTR_7g085260 | 49.606 | 127 | 58 | 4 | 46 | 169 | 21 | 144 | 1.57e-31 | 124 |
MS.gene050983.t1 | MTR_4g101680 | 43.624 | 149 | 76 | 5 | 46 | 189 | 11 | 156 | 1.99e-31 | 124 |
MS.gene050983.t1 | MTR_5g041940 | 42.262 | 168 | 74 | 7 | 46 | 199 | 7 | 165 | 3.75e-31 | 120 |
MS.gene050983.t1 | MTR_1g069805 | 43.243 | 148 | 79 | 4 | 46 | 191 | 14 | 158 | 4.14e-31 | 120 |
MS.gene050983.t1 | MTR_7g100990 | 40.260 | 154 | 79 | 5 | 46 | 189 | 15 | 165 | 4.28e-31 | 122 |
MS.gene050983.t1 | MTR_6g032770 | 48.031 | 127 | 60 | 4 | 46 | 170 | 22 | 144 | 5.12e-31 | 123 |
MS.gene050983.t1 | MTR_5g021710 | 44.000 | 150 | 74 | 6 | 46 | 189 | 12 | 157 | 7.62e-31 | 122 |
MS.gene050983.t1 | MTR_3g116070 | 48.000 | 125 | 62 | 2 | 46 | 169 | 27 | 149 | 9.11e-31 | 121 |
MS.gene050983.t1 | MTR_4g052620 | 43.137 | 153 | 73 | 5 | 46 | 186 | 9 | 159 | 9.78e-31 | 119 |
MS.gene050983.t1 | MTR_2g064470 | 40.606 | 165 | 84 | 5 | 46 | 203 | 15 | 172 | 1.62e-30 | 120 |
MS.gene050983.t1 | MTR_2g068920 | 47.244 | 127 | 62 | 4 | 46 | 169 | 25 | 149 | 1.65e-30 | 119 |
MS.gene050983.t1 | MTR_7g097090 | 43.357 | 143 | 76 | 4 | 46 | 186 | 14 | 153 | 2.24e-30 | 119 |
MS.gene050983.t1 | MTR_2g062730 | 41.420 | 169 | 84 | 7 | 46 | 202 | 14 | 179 | 2.38e-30 | 120 |
MS.gene050983.t1 | MTR_2g068880 | 46.457 | 127 | 63 | 4 | 46 | 169 | 26 | 150 | 3.05e-30 | 119 |
MS.gene050983.t1 | MTR_1g096430 | 42.000 | 150 | 77 | 6 | 46 | 189 | 11 | 156 | 3.52e-30 | 119 |
MS.gene050983.t1 | MTR_3g096140 | 39.205 | 176 | 92 | 7 | 58 | 226 | 2 | 169 | 3.75e-30 | 119 |
MS.gene050983.t1 | MTR_5g090970 | 46.825 | 126 | 62 | 4 | 46 | 169 | 22 | 144 | 3.02e-28 | 114 |
MS.gene050983.t1 | MTR_2g086690 | 41.176 | 153 | 77 | 5 | 46 | 186 | 8 | 159 | 5.37e-28 | 111 |
MS.gene050983.t1 | MTR_8g024480 | 39.344 | 183 | 89 | 7 | 46 | 212 | 19 | 195 | 6.12e-28 | 115 |
MS.gene050983.t1 | MTR_5g090970 | 46.032 | 126 | 62 | 4 | 46 | 169 | 22 | 143 | 8.20e-28 | 112 |
MS.gene050983.t1 | MTR_3g070040 | 52.000 | 125 | 51 | 6 | 46 | 169 | 12 | 128 | 1.09e-27 | 112 |
MS.gene050983.t1 | MTR_3g098810 | 40.909 | 132 | 70 | 4 | 46 | 174 | 18 | 144 | 4.21e-26 | 104 |
MS.gene050983.t1 | MTR_3g098810 | 35.976 | 164 | 86 | 5 | 46 | 195 | 18 | 176 | 7.55e-26 | 105 |
MS.gene050983.t1 | MTR_7g105170 | 37.267 | 161 | 84 | 6 | 46 | 191 | 8 | 166 | 2.94e-23 | 98.6 |
MS.gene050983.t1 | MTR_8g094580 | 43.925 | 107 | 39 | 4 | 100 | 192 | 8 | 107 | 2.32e-20 | 89.7 |
MS.gene050983.t1 | MTR_8g093790 | 33.553 | 152 | 80 | 6 | 46 | 196 | 14 | 145 | 1.43e-16 | 77.8 |
MS.gene050983.t1 | MTR_7g070140 | 41.667 | 84 | 47 | 2 | 88 | 169 | 6 | 89 | 2.52e-16 | 75.9 |
MS.gene050983.t1 | MTR_4g094302 | 33.858 | 127 | 68 | 5 | 46 | 169 | 15 | 128 | 2.47e-15 | 73.6 |
MS.gene050983.t1 | MTR_4g094302 | 27.907 | 172 | 97 | 6 | 46 | 203 | 15 | 173 | 3.65e-15 | 73.9 |
MS.gene050983.t1 | MTR_3g096400 | 32.484 | 157 | 81 | 6 | 46 | 186 | 11 | 158 | 1.44e-13 | 69.7 |
MS.gene050983.t1 | MTR_7g083330 | 29.299 | 157 | 98 | 5 | 46 | 194 | 22 | 173 | 1.42e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050983.t1 | AT4G35580 | 58.710 | 155 | 55 | 4 | 46 | 194 | 13 | 164 | 3.97e-54 | 189 |
MS.gene050983.t1 | AT4G35580 | 58.710 | 155 | 55 | 4 | 46 | 194 | 13 | 164 | 4.06e-54 | 189 |
MS.gene050983.t1 | AT4G35580 | 58.710 | 155 | 55 | 4 | 46 | 194 | 13 | 164 | 4.44e-54 | 188 |
MS.gene050983.t1 | AT4G01550 | 44.196 | 224 | 106 | 7 | 46 | 267 | 8 | 214 | 1.37e-51 | 180 |
MS.gene050983.t1 | AT1G33060 | 57.333 | 150 | 55 | 4 | 46 | 189 | 28 | 174 | 2.78e-50 | 180 |
MS.gene050983.t1 | AT1G33060 | 57.333 | 150 | 55 | 4 | 46 | 189 | 28 | 174 | 3.33e-50 | 180 |
MS.gene050983.t1 | AT3G49530 | 53.165 | 158 | 66 | 4 | 46 | 197 | 17 | 172 | 1.62e-49 | 174 |
MS.gene050983.t1 | AT3G49530 | 53.165 | 158 | 66 | 4 | 46 | 197 | 17 | 172 | 7.04e-49 | 173 |
MS.gene050983.t1 | AT5G24590 | 53.289 | 152 | 63 | 4 | 46 | 191 | 17 | 166 | 2.00e-47 | 169 |
MS.gene050983.t1 | AT4G17980 | 48.701 | 154 | 70 | 3 | 46 | 191 | 10 | 162 | 2.07e-43 | 153 |
MS.gene050983.t1 | AT5G17260 | 50.625 | 160 | 63 | 5 | 46 | 195 | 10 | 163 | 3.69e-43 | 158 |
MS.gene050983.t1 | AT4G17980 | 48.701 | 154 | 70 | 3 | 46 | 191 | 10 | 162 | 5.78e-43 | 153 |
MS.gene050983.t1 | AT3G17730 | 48.193 | 166 | 71 | 5 | 46 | 202 | 10 | 169 | 1.35e-42 | 150 |
MS.gene050983.t1 | AT3G03200 | 50.625 | 160 | 63 | 5 | 46 | 195 | 10 | 163 | 3.19e-42 | 155 |
MS.gene050983.t1 | AT4G01520 | 38.636 | 220 | 111 | 7 | 46 | 248 | 8 | 220 | 3.20e-42 | 151 |
MS.gene050983.t1 | AT4G01540 | 39.091 | 220 | 110 | 7 | 46 | 248 | 8 | 220 | 1.72e-41 | 152 |
MS.gene050983.t1 | AT4G01540 | 39.091 | 220 | 110 | 7 | 46 | 248 | 8 | 220 | 3.45e-41 | 151 |
MS.gene050983.t1 | AT4G01540 | 39.091 | 220 | 110 | 7 | 46 | 248 | 8 | 220 | 5.90e-41 | 151 |
MS.gene050983.t1 | AT4G01540 | 39.091 | 220 | 110 | 7 | 46 | 248 | 8 | 220 | 6.60e-41 | 152 |
MS.gene050983.t1 | AT5G46590 | 46.626 | 163 | 78 | 4 | 46 | 201 | 10 | 170 | 4.72e-40 | 145 |
MS.gene050983.t1 | AT3G10480 | 48.344 | 151 | 68 | 4 | 46 | 189 | 31 | 178 | 2.61e-39 | 147 |
MS.gene050983.t1 | AT1G65910 | 50.000 | 160 | 69 | 5 | 46 | 197 | 10 | 166 | 4.00e-39 | 149 |
MS.gene050983.t1 | AT3G10490 | 47.682 | 151 | 69 | 4 | 46 | 189 | 31 | 178 | 9.24e-39 | 140 |
MS.gene050983.t1 | AT5G09330 | 50.667 | 150 | 65 | 4 | 46 | 189 | 10 | 156 | 1.05e-38 | 146 |
MS.gene050983.t1 | AT5G09330 | 50.667 | 150 | 65 | 4 | 46 | 189 | 10 | 156 | 1.05e-38 | 146 |
MS.gene050983.t1 | AT5G09330 | 50.667 | 150 | 65 | 4 | 46 | 189 | 10 | 156 | 1.05e-38 | 146 |
MS.gene050983.t1 | AT5G09330 | 50.667 | 150 | 65 | 4 | 46 | 189 | 10 | 156 | 1.05e-38 | 146 |
MS.gene050983.t1 | AT5G09330 | 50.667 | 150 | 65 | 4 | 46 | 189 | 10 | 156 | 1.05e-38 | 146 |
MS.gene050983.t1 | AT3G10480 | 48.000 | 150 | 69 | 4 | 46 | 189 | 31 | 177 | 1.27e-38 | 145 |
MS.gene050983.t1 | AT3G10490 | 47.682 | 151 | 69 | 4 | 46 | 189 | 31 | 178 | 5.57e-38 | 143 |
MS.gene050983.t1 | AT5G46590 | 47.771 | 157 | 76 | 4 | 46 | 198 | 10 | 164 | 9.59e-38 | 139 |
MS.gene050983.t1 | AT2G27300 | 42.391 | 184 | 92 | 7 | 46 | 223 | 18 | 193 | 1.20e-37 | 140 |
MS.gene050983.t1 | AT1G02230 | 46.753 | 154 | 73 | 5 | 46 | 196 | 7 | 154 | 3.23e-37 | 139 |
MS.gene050983.t1 | AT5G64060 | 47.712 | 153 | 65 | 5 | 46 | 189 | 10 | 156 | 1.17e-36 | 138 |
MS.gene050983.t1 | AT3G44290 | 45.395 | 152 | 76 | 5 | 41 | 191 | 13 | 158 | 6.56e-36 | 132 |
MS.gene050983.t1 | AT3G15510 | 42.135 | 178 | 81 | 5 | 46 | 204 | 21 | 195 | 8.08e-36 | 135 |
MS.gene050983.t1 | AT3G15500 | 46.296 | 162 | 65 | 7 | 46 | 194 | 18 | 170 | 9.10e-36 | 134 |
MS.gene050983.t1 | AT5G39610 | 55.200 | 125 | 50 | 5 | 46 | 169 | 24 | 143 | 1.41e-35 | 133 |
MS.gene050983.t1 | AT5G39820 | 49.242 | 132 | 63 | 3 | 46 | 176 | 24 | 152 | 2.42e-35 | 134 |
MS.gene050983.t1 | AT3G29035 | 54.400 | 125 | 51 | 5 | 46 | 169 | 28 | 147 | 2.75e-35 | 133 |
MS.gene050983.t1 | AT1G32510 | 44.937 | 158 | 74 | 4 | 46 | 191 | 10 | 166 | 3.77e-35 | 132 |
MS.gene050983.t1 | AT3G04070 | 44.099 | 161 | 71 | 5 | 46 | 190 | 14 | 171 | 4.61e-35 | 133 |
MS.gene050983.t1 | AT1G54330 | 48.980 | 147 | 69 | 4 | 46 | 189 | 10 | 153 | 5.48e-35 | 132 |
MS.gene050983.t1 | AT1G52890 | 43.023 | 172 | 79 | 6 | 46 | 207 | 18 | 180 | 5.51e-35 | 132 |
MS.gene050983.t1 | AT1G01720 | 44.805 | 154 | 69 | 5 | 46 | 189 | 11 | 158 | 6.48e-35 | 131 |
MS.gene050983.t1 | AT3G10500 | 49.669 | 151 | 67 | 5 | 46 | 190 | 13 | 160 | 7.96e-35 | 136 |
MS.gene050983.t1 | AT5G22290 | 45.638 | 149 | 71 | 6 | 46 | 191 | 25 | 166 | 8.40e-35 | 132 |
MS.gene050983.t1 | AT5G08790 | 45.806 | 155 | 67 | 6 | 46 | 189 | 11 | 159 | 8.40e-35 | 131 |
MS.gene050983.t1 | AT5G61430 | 54.400 | 125 | 51 | 5 | 46 | 169 | 20 | 139 | 8.93e-35 | 132 |
MS.gene050983.t1 | AT4G27410 | 45.455 | 154 | 65 | 6 | 46 | 189 | 18 | 162 | 9.94e-35 | 131 |
MS.gene050983.t1 | AT5G04410 | 48.344 | 151 | 69 | 4 | 46 | 190 | 13 | 160 | 1.13e-34 | 136 |
MS.gene050983.t1 | AT3G44290 | 45.395 | 152 | 76 | 5 | 41 | 191 | 13 | 158 | 1.68e-34 | 131 |
MS.gene050983.t1 | AT5G07680 | 54.400 | 125 | 51 | 5 | 46 | 169 | 21 | 140 | 2.05e-34 | 131 |
MS.gene050983.t1 | AT5G07680 | 53.968 | 126 | 52 | 5 | 46 | 170 | 7 | 127 | 2.07e-34 | 130 |
MS.gene050983.t1 | AT3G04070 | 50.781 | 128 | 56 | 4 | 46 | 169 | 14 | 138 | 2.34e-34 | 131 |
MS.gene050983.t1 | AT2G17040 | 44.720 | 161 | 78 | 5 | 46 | 198 | 10 | 167 | 2.47e-34 | 129 |
MS.gene050983.t1 | AT1G26870 | 49.600 | 125 | 59 | 3 | 46 | 169 | 20 | 141 | 3.24e-34 | 132 |
MS.gene050983.t1 | AT3G18400 | 41.327 | 196 | 102 | 8 | 46 | 233 | 9 | 199 | 5.08e-34 | 129 |
MS.gene050983.t1 | AT5G66300 | 46.000 | 150 | 72 | 5 | 46 | 189 | 16 | 162 | 8.70e-34 | 128 |
MS.gene050983.t1 | AT5G53950 | 54.400 | 125 | 53 | 3 | 46 | 169 | 21 | 142 | 8.74e-34 | 130 |
MS.gene050983.t1 | AT2G24430 | 46.358 | 151 | 73 | 4 | 46 | 191 | 20 | 167 | 1.13e-33 | 129 |
MS.gene050983.t1 | AT2G24430 | 46.358 | 151 | 73 | 4 | 46 | 191 | 20 | 167 | 1.13e-33 | 129 |
MS.gene050983.t1 | AT1G34190 | 46.584 | 161 | 71 | 5 | 39 | 190 | 13 | 167 | 1.64e-33 | 132 |
MS.gene050983.t1 | AT3G04060 | 52.800 | 125 | 54 | 4 | 46 | 169 | 24 | 144 | 1.81e-33 | 129 |
MS.gene050983.t1 | AT1G12260 | 44.000 | 150 | 74 | 6 | 46 | 189 | 11 | 156 | 1.90e-33 | 129 |
MS.gene050983.t1 | AT1G62700 | 40.571 | 175 | 93 | 6 | 46 | 215 | 11 | 179 | 3.71e-33 | 129 |
MS.gene050983.t1 | AT1G62700 | 40.571 | 175 | 93 | 6 | 46 | 215 | 11 | 179 | 3.71e-33 | 129 |
MS.gene050983.t1 | AT1G12260 | 44.000 | 150 | 74 | 6 | 46 | 189 | 11 | 156 | 3.96e-33 | 129 |
MS.gene050983.t1 | AT1G69490 | 44.805 | 154 | 70 | 7 | 46 | 189 | 13 | 161 | 4.46e-33 | 125 |
MS.gene050983.t1 | AT3G12910 | 47.761 | 134 | 64 | 4 | 46 | 176 | 25 | 155 | 6.61e-33 | 126 |
MS.gene050983.t1 | AT5G63790 | 41.176 | 187 | 86 | 7 | 46 | 214 | 64 | 244 | 6.84e-33 | 127 |
MS.gene050983.t1 | AT1G02250 | 44.371 | 151 | 79 | 4 | 46 | 193 | 7 | 155 | 7.02e-33 | 127 |
MS.gene050983.t1 | AT5G63790 | 41.176 | 187 | 86 | 7 | 46 | 214 | 54 | 234 | 7.30e-33 | 126 |
MS.gene050983.t1 | AT1G34180 | 51.145 | 131 | 60 | 3 | 40 | 169 | 14 | 141 | 8.83e-33 | 129 |
MS.gene050983.t1 | AT3G15170 | 52.000 | 125 | 56 | 3 | 46 | 169 | 24 | 145 | 9.03e-33 | 126 |
MS.gene050983.t1 | AT3G10480 | 40.217 | 184 | 67 | 6 | 46 | 189 | 31 | 211 | 1.54e-32 | 129 |
MS.gene050983.t1 | AT1G71930 | 44.295 | 149 | 75 | 5 | 46 | 189 | 13 | 158 | 1.76e-32 | 125 |
MS.gene050983.t1 | AT1G71930 | 44.295 | 149 | 75 | 5 | 46 | 189 | 13 | 158 | 1.76e-32 | 125 |
MS.gene050983.t1 | AT1G34180 | 51.145 | 131 | 60 | 3 | 40 | 169 | 14 | 141 | 2.00e-32 | 129 |
MS.gene050983.t1 | AT5G18270 | 52.000 | 125 | 55 | 4 | 46 | 169 | 25 | 145 | 4.05e-32 | 125 |
MS.gene050983.t1 | AT2G02450 | 43.919 | 148 | 75 | 5 | 46 | 189 | 55 | 198 | 4.63e-32 | 125 |
MS.gene050983.t1 | AT2G02450 | 43.919 | 148 | 75 | 5 | 46 | 189 | 55 | 198 | 6.04e-32 | 126 |
MS.gene050983.t1 | AT5G62380 | 44.667 | 150 | 73 | 6 | 46 | 189 | 11 | 156 | 6.34e-32 | 124 |
MS.gene050983.t1 | AT5G62380 | 44.667 | 150 | 73 | 6 | 46 | 189 | 11 | 156 | 6.34e-32 | 124 |
MS.gene050983.t1 | AT4G27410 | 42.012 | 169 | 66 | 7 | 46 | 189 | 18 | 179 | 6.61e-32 | 124 |
MS.gene050983.t1 | AT1G61110 | 44.025 | 159 | 82 | 5 | 46 | 203 | 20 | 172 | 6.81e-32 | 124 |
MS.gene050983.t1 | AT5G18270 | 51.200 | 125 | 56 | 4 | 46 | 169 | 25 | 145 | 9.35e-32 | 124 |
MS.gene050983.t1 | AT1G76420 | 43.333 | 150 | 75 | 5 | 46 | 189 | 26 | 171 | 1.44e-31 | 123 |
MS.gene050983.t1 | AT4G10350 | 45.033 | 151 | 73 | 5 | 46 | 189 | 13 | 160 | 3.44e-31 | 122 |
MS.gene050983.t1 | AT1G33280 | 45.270 | 148 | 74 | 5 | 46 | 189 | 12 | 156 | 4.69e-31 | 121 |
MS.gene050983.t1 | AT5G04395 | 42.759 | 145 | 69 | 4 | 46 | 177 | 32 | 175 | 4.70e-31 | 118 |
MS.gene050983.t1 | AT2G33480 | 46.667 | 150 | 64 | 6 | 46 | 189 | 19 | 158 | 5.04e-31 | 120 |
MS.gene050983.t1 | AT2G33480 | 45.333 | 150 | 68 | 5 | 46 | 189 | 19 | 160 | 5.07e-31 | 120 |
MS.gene050983.t1 | AT2G43000 | 35.644 | 202 | 111 | 7 | 38 | 225 | 14 | 210 | 6.12e-31 | 120 |
MS.gene050983.t1 | AT1G77450 | 42.484 | 153 | 73 | 5 | 46 | 189 | 14 | 160 | 6.46e-31 | 119 |
MS.gene050983.t1 | AT2G18060 | 43.333 | 150 | 75 | 6 | 46 | 189 | 13 | 158 | 1.02e-30 | 122 |
MS.gene050983.t1 | AT2G18060 | 43.333 | 150 | 75 | 6 | 46 | 189 | 13 | 158 | 1.02e-30 | 122 |
MS.gene050983.t1 | AT4G36160 | 42.667 | 150 | 76 | 6 | 46 | 189 | 14 | 159 | 2.94e-30 | 120 |
MS.gene050983.t1 | AT4G36160 | 42.667 | 150 | 76 | 6 | 46 | 189 | 14 | 159 | 2.94e-30 | 120 |
MS.gene050983.t1 | AT5G13180 | 40.940 | 149 | 77 | 4 | 46 | 189 | 18 | 160 | 3.21e-30 | 117 |
MS.gene050983.t1 | AT4G36160 | 42.667 | 150 | 76 | 6 | 46 | 189 | 18 | 163 | 3.32e-30 | 120 |
MS.gene050983.t1 | AT1G56010 | 41.176 | 153 | 77 | 4 | 46 | 189 | 23 | 171 | 5.97e-30 | 119 |
MS.gene050983.t1 | AT1G34180 | 46.853 | 143 | 60 | 4 | 40 | 169 | 14 | 153 | 1.62e-29 | 120 |
MS.gene050983.t1 | AT1G34180 | 46.853 | 143 | 60 | 4 | 40 | 169 | 14 | 153 | 2.73e-29 | 120 |
MS.gene050983.t1 | AT1G52880 | 44.643 | 168 | 68 | 6 | 46 | 194 | 21 | 182 | 3.83e-29 | 116 |
MS.gene050983.t1 | AT1G01010 | 42.857 | 154 | 78 | 4 | 46 | 191 | 7 | 158 | 4.06e-29 | 118 |
MS.gene050983.t1 | AT2G46770 | 41.104 | 163 | 84 | 7 | 46 | 203 | 20 | 175 | 2.07e-28 | 115 |
MS.gene050983.t1 | AT1G79580 | 43.046 | 151 | 74 | 6 | 46 | 189 | 21 | 166 | 2.53e-28 | 115 |
MS.gene050983.t1 | AT1G79580 | 43.046 | 151 | 74 | 6 | 46 | 189 | 21 | 166 | 2.53e-28 | 115 |
MS.gene050983.t1 | AT1G79580 | 43.046 | 151 | 74 | 6 | 46 | 189 | 21 | 166 | 2.53e-28 | 115 |
MS.gene050983.t1 | AT1G79580 | 43.046 | 151 | 74 | 6 | 46 | 189 | 21 | 166 | 2.53e-28 | 115 |
MS.gene050983.t1 | AT1G79580 | 43.046 | 151 | 74 | 6 | 46 | 189 | 21 | 166 | 2.53e-28 | 115 |
MS.gene050983.t1 | AT5G22380 | 40.789 | 152 | 78 | 5 | 46 | 186 | 9 | 159 | 1.83e-27 | 109 |
MS.gene050983.t1 | AT3G61910 | 32.083 | 240 | 131 | 10 | 46 | 263 | 15 | 244 | 3.07e-27 | 111 |
MS.gene050983.t1 | AT3G12977 | 37.158 | 183 | 89 | 7 | 46 | 214 | 22 | 192 | 3.89e-27 | 110 |
MS.gene050983.t1 | AT3G04420 | 36.508 | 189 | 110 | 6 | 46 | 226 | 7 | 193 | 4.47e-27 | 110 |
MS.gene050983.t1 | AT3G04420 | 36.508 | 189 | 110 | 6 | 46 | 226 | 7 | 193 | 6.87e-27 | 110 |
MS.gene050983.t1 | AT4G28530 | 38.272 | 162 | 81 | 4 | 46 | 190 | 14 | 173 | 1.77e-26 | 109 |
MS.gene050983.t1 | AT1G32770 | 40.854 | 164 | 71 | 8 | 46 | 189 | 20 | 177 | 2.10e-26 | 109 |
MS.gene050983.t1 | AT1G02220 | 40.559 | 143 | 80 | 3 | 46 | 187 | 7 | 145 | 5.02e-25 | 106 |
MS.gene050983.t1 | AT3G44350 | 42.748 | 131 | 69 | 4 | 46 | 172 | 9 | 137 | 9.23e-25 | 100 |
MS.gene050983.t1 | AT3G44350 | 38.710 | 155 | 83 | 5 | 46 | 190 | 9 | 161 | 1.02e-24 | 102 |
MS.gene050983.t1 | AT1G32870 | 44.444 | 153 | 72 | 6 | 46 | 190 | 14 | 161 | 1.56e-24 | 106 |
MS.gene050983.t1 | AT1G32870 | 44.444 | 153 | 72 | 6 | 46 | 190 | 14 | 161 | 1.61e-24 | 106 |
MS.gene050983.t1 | AT1G32870 | 44.444 | 153 | 72 | 6 | 46 | 190 | 50 | 197 | 2.36e-24 | 105 |
MS.gene050983.t1 | AT5G61430 | 54.430 | 79 | 33 | 3 | 93 | 170 | 1 | 77 | 6.11e-20 | 89.7 |
MS.gene050983.t1 | AT3G04430 | 40.441 | 136 | 65 | 5 | 48 | 171 | 6 | 137 | 9.11e-20 | 87.4 |
MS.gene050983.t1 | AT3G12977 | 37.903 | 124 | 64 | 4 | 100 | 214 | 20 | 139 | 6.10e-18 | 82.8 |
MS.gene050983.t1 | AT4G10350 | 41.905 | 105 | 53 | 3 | 91 | 189 | 11 | 113 | 1.54e-17 | 83.2 |
MS.gene050983.t1 | AT1G56010 | 29.004 | 231 | 118 | 7 | 100 | 287 | 8 | 235 | 3.86e-17 | 81.3 |
MS.gene050983.t1 | AT4G28530 | 41.905 | 105 | 44 | 2 | 46 | 135 | 14 | 116 | 1.73e-16 | 80.5 |
MS.gene050983.t1 | AT2G33480 | 42.857 | 98 | 48 | 3 | 98 | 189 | 8 | 103 | 2.59e-16 | 77.8 |
MS.gene050983.t1 | AT5G64530 | 35.714 | 126 | 63 | 5 | 46 | 169 | 7 | 116 | 2.80e-16 | 76.3 |
MS.gene050983.t1 | AT5G64530 | 35.714 | 126 | 63 | 5 | 46 | 169 | 7 | 116 | 9.11e-16 | 75.9 |
MS.gene050983.t1 | AT2G43000 | 33.083 | 133 | 73 | 5 | 107 | 225 | 2 | 132 | 5.54e-12 | 65.1 |
MS.gene050983.t1 | AT3G55210 | 33.129 | 163 | 90 | 8 | 46 | 192 | 15 | 174 | 1.22e-11 | 65.5 |
MS.gene050983.t1 | AT5G14490 | 29.070 | 172 | 98 | 6 | 46 | 199 | 59 | 224 | 8.87e-11 | 63.5 |
MS.gene050983.t1 | AT5G14490 | 29.070 | 172 | 98 | 6 | 46 | 199 | 62 | 227 | 9.52e-11 | 63.5 |
Find 70 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTCGAGATGATTTC+GGG | 0.227385 | 8.3:-68395927 | MS.gene050983:CDS |
ACAAATACGCAAATAGTAAA+AGG | 0.269504 | 8.3:-68397017 | MS.gene050983:CDS |
GCATCATTTCGAGATGATTT+CGG | 0.275502 | 8.3:-68395928 | MS.gene050983:CDS |
TGGTCTTGACCGTAAGATTA+AGG | 0.284539 | 8.3:-68396956 | MS.gene050983:CDS |
GAATATGGAACCAATGTTTC+AGG | 0.286511 | 8.3:-68396464 | MS.gene050983:CDS |
TTTACAGTGTGGCAATGTTC+TGG | 0.292487 | 8.3:-68395998 | MS.gene050983:intron |
AGAGGTACAGACAATGTTAT+TGG | 0.307609 | 8.3:-68396931 | MS.gene050983:CDS |
TTCCTCTTCAGCTTTCTTCT+CGG | 0.325142 | 8.3:+68396685 | None:intergenic |
CTCCTGGTGTTAAAAGCAAC+TGG | 0.345111 | 8.3:-68396873 | MS.gene050983:CDS |
TACTATAATGGTTGTGCTCC+TGG | 0.345726 | 8.3:-68396889 | MS.gene050983:CDS |
AAAACACTTGTGTACTATAA+TGG | 0.357000 | 8.3:-68396901 | MS.gene050983:CDS |
GACATGGTGGTGGTTGGTCT+TGG | 0.361614 | 8.3:+68395790 | None:intergenic |
CATATCGATGTGTCCACTTT+CGG | 0.387067 | 8.3:+68396339 | None:intergenic |
TCGTTGAGAATGATTTACTA+TGG | 0.400930 | 8.3:-68396178 | MS.gene050983:CDS |
CTTGTTGAACATCCTAGTTC+AGG | 0.403607 | 8.3:-68395961 | MS.gene050983:CDS |
GAGGTACAGACAATGTTATT+GGG | 0.411621 | 8.3:-68396930 | MS.gene050983:CDS |
TGATGAGGTTCCTGAAACAT+TGG | 0.411707 | 8.3:+68396454 | None:intergenic |
AAAGAGAGTGAAAGTGATGA+AGG | 0.416586 | 8.3:+68397365 | None:intergenic |
GAAGGACACAGTGTGGATAC+TGG | 0.428296 | 8.3:-68396987 | MS.gene050983:CDS |
GACCGTAAGATTAAGGTTAG+AGG | 0.442904 | 8.3:-68396949 | MS.gene050983:CDS |
TGGTTGGTCTTGGATGATAC+TGG | 0.447272 | 8.3:+68395800 | None:intergenic |
TGTTTGCAAGTTCGAACCTT+GGG | 0.454947 | 8.3:-68397183 | MS.gene050983:CDS |
TACCTCGCCAGAAAAGAATA+TGG | 0.459100 | 8.3:-68396479 | MS.gene050983:CDS |
CTCGGACTGGACAGGAAAGC+TGG | 0.467178 | 8.3:+68396201 | None:intergenic |
TTGTTTCTTCTTAGAGTGGA+AGG | 0.468867 | 8.3:+68395826 | None:intergenic |
TCATTCTCAACGACTCGGAC+TGG | 0.469733 | 8.3:+68396188 | None:intergenic |
TACCTCTAACCTTAATCTTA+CGG | 0.491526 | 8.3:+68396947 | None:intergenic |
GCATAGTATTCGCCTGAACT+AGG | 0.492328 | 8.3:+68395949 | None:intergenic |
AAAGTGATGAAGGGAGAGAG+TGG | 0.493304 | 8.3:+68397375 | None:intergenic |
TTTACAAGCTCTTCATCTGT+TGG | 0.494683 | 8.3:+68397272 | None:intergenic |
GATAGAATGGTATGTGATGA+AGG | 0.494733 | 8.3:-68396659 | MS.gene050983:CDS |
CAATTGTTTCAGGTAATAAG+TGG | 0.498045 | 8.3:-68396502 | MS.gene050983:intron |
GAAGCATCTTTATCAAACTC+AGG | 0.498626 | 8.3:-68396373 | MS.gene050983:CDS |
TCGGAACTCATGTGTCTACT+TGG | 0.499283 | 8.3:+68396632 | None:intergenic |
TTCAATCTCTGAAAATGAGA+TGG | 0.499943 | 8.3:-68396395 | MS.gene050983:CDS |
TGAAGAGGAAACTGATAGAA+TGG | 0.513653 | 8.3:-68396672 | MS.gene050983:CDS |
GAAAATCAAGAAACAGTTGA+AGG | 0.516420 | 8.3:-68396605 | MS.gene050983:CDS |
GGTAATGAATATTGCTGTGT+TGG | 0.521337 | 8.3:+68397396 | None:intergenic |
AGCCGAGAAGAAAGCTGAAG+AGG | 0.521986 | 8.3:-68396687 | MS.gene050983:CDS |
TTCGAACCTTGGGACTTACC+AGG | 0.522061 | 8.3:-68397173 | MS.gene050983:intron |
ATCAATTCAATGTTAAATGA+CGG | 0.532646 | 8.3:-68396277 | MS.gene050983:CDS |
TGCTGAATTAGTCTCTATGC+CGG | 0.535468 | 8.3:-68396140 | MS.gene050983:intron |
GTTATTGTTTCTTCTTAGAG+TGG | 0.539752 | 8.3:+68395822 | None:intergenic |
TCCTCATCAATAGTTTCGAA+CGG | 0.541580 | 8.3:+68396310 | None:intergenic |
CTCAACGACTCGGACTGGAC+AGG | 0.555897 | 8.3:+68396193 | None:intergenic |
AAGAGAGTGAAAGTGATGAA+GGG | 0.559835 | 8.3:+68397366 | None:intergenic |
CAAGCTCTTCATCTGTTGGA+CGG | 0.560584 | 8.3:+68397276 | None:intergenic |
CAATGTTCTGGATACTTCAA+CGG | 0.563840 | 8.3:-68395986 | MS.gene050983:CDS |
ACAAACCTGGTTATCATCAA+AGG | 0.564326 | 8.3:+68396825 | None:intergenic |
TACCACCTTTGATGATAACC+AGG | 0.567592 | 8.3:-68396830 | MS.gene050983:intron |
AAGCATCTTTATCAAACTCA+GGG | 0.568531 | 8.3:-68396372 | MS.gene050983:CDS |
ATGTTTGCAAGTTCGAACCT+TGG | 0.568862 | 8.3:-68397184 | MS.gene050983:CDS |
ATAGTAAAAGGTTTAACAGA+AGG | 0.579914 | 8.3:-68397005 | MS.gene050983:CDS |
ATAGAATGGTATGTGATGAA+GGG | 0.580154 | 8.3:-68396658 | MS.gene050983:CDS |
TAAAATCCGATGATCCAGAA+TGG | 0.594696 | 8.3:-68397062 | MS.gene050983:CDS |
TGTGGATACTGGAAAGCCAC+TGG | 0.602459 | 8.3:-68396976 | MS.gene050983:CDS |
TCCTGGTGTTAAAAGCAACT+GGG | 0.605841 | 8.3:-68396872 | MS.gene050983:CDS |
AGCTATAACATTGTTGACAG+TGG | 0.605859 | 8.3:+68397214 | None:intergenic |
TTGCAATTGATCATCTCTAG+AGG | 0.607895 | 8.3:+68395865 | None:intergenic |
TCCGTTCGAAACTATTGATG+AGG | 0.608684 | 8.3:-68396311 | MS.gene050983:CDS |
ATGATTTACTATGGAAGCAG+TGG | 0.614801 | 8.3:-68396169 | MS.gene050983:CDS |
AATCTTACGGTCAAGACCAG+TGG | 0.626820 | 8.3:+68396960 | None:intergenic |
GAAGACTGGTATGTTGACAA+AGG | 0.640048 | 8.3:+68396415 | None:intergenic |
TAGAATGGTATGTGATGAAG+GGG | 0.641183 | 8.3:-68396657 | MS.gene050983:CDS |
ATCATTTCGAGATGATTTCG+GGG | 0.650121 | 8.3:-68395926 | MS.gene050983:CDS |
TTTGCGTATTTGTAATCGCG+AGG | 0.654879 | 8.3:+68397027 | None:intergenic |
GTAAATCATTCTCAACGACT+CGG | 0.660341 | 8.3:+68396183 | None:intergenic |
AACCTGGTTATCATCAAAGG+TGG | 0.663139 | 8.3:+68396828 | None:intergenic |
TCATTTCGAGATGATTTCGG+GGG | 0.671935 | 8.3:-68395925 | MS.gene050983:CDS |
TTTAACAGAAGGACACAGTG+TGG | 0.694289 | 8.3:-68396994 | MS.gene050983:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATGAGAAAATAATGAT+GGG | + | chr8.3:68396045-68396064 | None:intergenic | 15.0% |
!!! | TTTTTATGAGAAAATAATGA+TGG | + | chr8.3:68396046-68396065 | None:intergenic | 15.0% |
!! | ATACACACTTTAATATCATT+TGG | + | chr8.3:68397082-68397101 | None:intergenic | 20.0% |
!! | ATCAATTCAATGTTAAATGA+CGG | - | chr8.3:68396898-68396917 | MS.gene050983:CDS | 20.0% |
!! | TTTATGAGAAAATAATGATG+GGG | + | chr8.3:68396044-68396063 | None:intergenic | 20.0% |
! | AAAACACTTGTGTACTATAA+TGG | - | chr8.3:68396274-68396293 | MS.gene050983:CDS | 25.0% |
! | ACAAATACGCAAATAGTAAA+AGG | - | chr8.3:68396158-68396177 | MS.gene050983:CDS | 25.0% |
! | ATAGTAAAAGGTTTAACAGA+AGG | - | chr8.3:68396170-68396189 | MS.gene050983:CDS | 25.0% |
! | ATGTTTACACTTTATGAGTA+TGG | - | chr8.3:68396385-68396404 | MS.gene050983:CDS | 25.0% |
! | TATCTCAAAAACAAGTTACT+TGG | - | chr8.3:68395930-68395949 | MS.gene050983:CDS | 25.0% |
!! | TTCTTCTAAATTTTACAGTG+TGG | - | chr8.3:68397166-68397185 | MS.gene050983:intron | 25.0% |
!! | TTTTGAGCAGAAATATTTAC+CGG | + | chr8.3:68397057-68397076 | None:intergenic | 25.0% |
!!! | AAATGACGGATATTTTGTTA+AGG | - | chr8.3:68396912-68396931 | MS.gene050983:CDS | 25.0% |
!!! | CTTATTTTTGAACAAGTACT+TGG | - | chr8.3:68397104-68397123 | MS.gene050983:intron | 25.0% |
!!! | TTTTGTTTTGAAATGTGGTT+TGG | + | chr8.3:68395857-68395876 | None:intergenic | 25.0% |
AAGAATGAAATCCTTACATC+AGG | + | chr8.3:68396600-68396619 | None:intergenic | 30.0% | |
AAGCATCTTTATCAAACTCA+GGG | - | chr8.3:68396803-68396822 | MS.gene050983:intron | 30.0% | |
ACTTGTTTGTCAATTGTTTC+AGG | - | chr8.3:68396663-68396682 | MS.gene050983:CDS | 30.0% | |
ATAGAATGGTATGTGATGAA+GGG | - | chr8.3:68396517-68396536 | MS.gene050983:intron | 30.0% | |
GAAAATCAAGAAACAGTTGA+AGG | - | chr8.3:68396570-68396589 | MS.gene050983:intron | 30.0% | |
TACCTCTAACCTTAATCTTA+CGG | + | chr8.3:68396231-68396250 | None:intergenic | 30.0% | |
TCGTTGAGAATGATTTACTA+TGG | - | chr8.3:68396997-68397016 | MS.gene050983:CDS | 30.0% | |
TTGTTGTAACAAAACAAACC+TGG | + | chr8.3:68396366-68396385 | None:intergenic | 30.0% | |
! | AAAAGTCCTCTACGAAATTT+TGG | + | chr8.3:68396445-68396464 | None:intergenic | 30.0% |
! | ATGAAATGTCTAAGTTGAGT+TGG | - | chr8.3:68397132-68397151 | MS.gene050983:intron | 30.0% |
! | CAATTGTTTCAGGTAATAAG+TGG | - | chr8.3:68396673-68396692 | MS.gene050983:CDS | 30.0% |
! | GTTATTGTTTCTTCTTAGAG+TGG | + | chr8.3:68397356-68397375 | None:intergenic | 30.0% |
! | TGTTTCTTGATTTTCGTGAT+CGG | + | chr8.3:68396565-68396584 | None:intergenic | 30.0% |
! | TTCAATCTCTGAAAATGAGA+TGG | - | chr8.3:68396780-68396799 | MS.gene050983:intron | 30.0% |
!! | ATTGGTTCCATATTCTTTTC+TGG | + | chr8.3:68396706-68396725 | None:intergenic | 30.0% |
!!! | GAGTATGGTATGTGTTTTTT+CGG | - | chr8.3:68396400-68396419 | MS.gene050983:CDS | 30.0% |
!!! | GCTTGTTTTGTTTTGAAATG+TGG | + | chr8.3:68395862-68395881 | None:intergenic | 30.0% |
!!! | GTAACTTGTTTTTGAGATAG+TGG | + | chr8.3:68395929-68395948 | None:intergenic | 30.0% |
!!! | TGACAAAGGAAAGTACTTTT+CGG | + | chr8.3:68396749-68396768 | None:intergenic | 30.0% |
AAAGAGAGTGAAAGTGATGA+AGG | + | chr8.3:68395813-68395832 | None:intergenic | 35.0% | |
AAGAGAGTGAAAGTGATGAA+GGG | + | chr8.3:68395812-68395831 | None:intergenic | 35.0% | |
ACAAACCTGGTTATCATCAA+AGG | + | chr8.3:68396353-68396372 | None:intergenic | 35.0% | |
AGCTATAACATTGTTGACAG+TGG | + | chr8.3:68395964-68395983 | None:intergenic | 35.0% | |
ATCATTTCGAGATGATTTCG+GGG | - | chr8.3:68397249-68397268 | MS.gene050983:CDS | 35.0% | |
ATGATTTACTATGGAAGCAG+TGG | - | chr8.3:68397006-68397025 | MS.gene050983:CDS | 35.0% | |
CATCATTTCGAGATGATTTC+GGG | - | chr8.3:68397248-68397267 | MS.gene050983:CDS | 35.0% | |
GAAAAACCATTCTGGATCAT+CGG | + | chr8.3:68396122-68396141 | None:intergenic | 35.0% | |
GAATATGGAACCAATGTTTC+AGG | - | chr8.3:68396711-68396730 | MS.gene050983:CDS | 35.0% | |
GAGGTACAGACAATGTTATT+GGG | - | chr8.3:68396245-68396264 | MS.gene050983:CDS | 35.0% | |
GATAGAATGGTATGTGATGA+AGG | - | chr8.3:68396516-68396535 | MS.gene050983:intron | 35.0% | |
GCATCATTTCGAGATGATTT+CGG | - | chr8.3:68397247-68397266 | MS.gene050983:CDS | 35.0% | |
GGACAAAAGAAAAACCATTC+TGG | + | chr8.3:68396130-68396149 | None:intergenic | 35.0% | |
GGTAATGAATATTGCTGTGT+TGG | + | chr8.3:68395782-68395801 | None:intergenic | 35.0% | |
GTAAATCATTCTCAACGACT+CGG | + | chr8.3:68396995-68397014 | None:intergenic | 35.0% | |
TAAAATCCGATGATCCAGAA+TGG | - | chr8.3:68396113-68396132 | MS.gene050983:intron | 35.0% | |
TAGAATGGTATGTGATGAAG+GGG | - | chr8.3:68396518-68396537 | MS.gene050983:intron | 35.0% | |
TATCCTCCAAAATTTCGTAG+AGG | - | chr8.3:68396436-68396455 | MS.gene050983:CDS | 35.0% | |
TCCTCATCAATAGTTTCGAA+CGG | + | chr8.3:68396868-68396887 | None:intergenic | 35.0% | |
TGAAGAGGAAACTGATAGAA+TGG | - | chr8.3:68396503-68396522 | MS.gene050983:intron | 35.0% | |
TTGAAGGAATTCCTGATGTA+AGG | - | chr8.3:68396586-68396605 | MS.gene050983:intron | 35.0% | |
TTGCAATTGATCATCTCTAG+AGG | + | chr8.3:68397313-68397332 | None:intergenic | 35.0% | |
TTTACAAGCTCTTCATCTGT+TGG | + | chr8.3:68395906-68395925 | None:intergenic | 35.0% | |
! | AGAGGTACAGACAATGTTAT+TGG | - | chr8.3:68396244-68396263 | MS.gene050983:CDS | 35.0% |
! | CAATGTTCTGGATACTTCAA+CGG | - | chr8.3:68397189-68397208 | MS.gene050983:CDS | 35.0% |
! | CATTTTCAGAGATTGAAGAC+TGG | + | chr8.3:68396777-68396796 | None:intergenic | 35.0% |
! | GAAGCATCTTTATCAAACTC+AGG | - | chr8.3:68396802-68396821 | MS.gene050983:intron | 35.0% |
! | TGAAGCAGATCTTTTTGACA+TGG | + | chr8.3:68397404-68397423 | None:intergenic | 35.0% |
! | TTGTTTCTTCTTAGAGTGGA+AGG | + | chr8.3:68397352-68397371 | None:intergenic | 35.0% |
!! | GGTTTGTTTGTGTTTTTACC+TGG | + | chr8.3:68396023-68396042 | None:intergenic | 35.0% |
!!! | TGTCTAAGTTGAGTTGGTTT+TGG | - | chr8.3:68397138-68397157 | MS.gene050983:intron | 35.0% |
AACCTGGTTATCATCAAAGG+TGG | + | chr8.3:68396350-68396369 | None:intergenic | 40.0% | |
ATGTTTGCAAGTTCGAACCT+TGG | - | chr8.3:68395991-68396010 | MS.gene050983:CDS | 40.0% | |
CATATCGATGTGTCCACTTT+CGG | + | chr8.3:68396839-68396858 | None:intergenic | 40.0% | |
CTTGTTGAACATCCTAGTTC+AGG | - | chr8.3:68397214-68397233 | MS.gene050983:CDS | 40.0% | |
GAAGACTGGTATGTTGACAA+AGG | + | chr8.3:68396763-68396782 | None:intergenic | 40.0% | |
GACCGTAAGATTAAGGTTAG+AGG | - | chr8.3:68396226-68396245 | MS.gene050983:CDS | 40.0% | |
TACCTCGCCAGAAAAGAATA+TGG | - | chr8.3:68396696-68396715 | MS.gene050983:CDS | 40.0% | |
TACTATAATGGTTGTGCTCC+TGG | - | chr8.3:68396286-68396305 | MS.gene050983:CDS | 40.0% | |
TCATTTCGAGATGATTTCGG+GGG | - | chr8.3:68397250-68397269 | MS.gene050983:CDS | 40.0% | |
TCCGTTCGAAACTATTGATG+AGG | - | chr8.3:68396864-68396883 | MS.gene050983:CDS | 40.0% | |
TGATGAGGTTCCTGAAACAT+TGG | + | chr8.3:68396724-68396743 | None:intergenic | 40.0% | |
TGTTTGCAAGTTCGAACCTT+GGG | - | chr8.3:68395992-68396011 | MS.gene050983:CDS | 40.0% | |
TTCCTCTTCAGCTTTCTTCT+CGG | + | chr8.3:68396493-68396512 | None:intergenic | 40.0% | |
TTTAACAGAAGGACACAGTG+TGG | - | chr8.3:68396181-68396200 | MS.gene050983:CDS | 40.0% | |
TTTACAGTGTGGCAATGTTC+TGG | - | chr8.3:68397177-68397196 | MS.gene050983:CDS | 40.0% | |
TTTGCGTATTTGTAATCGCG+AGG | + | chr8.3:68396151-68396170 | None:intergenic | 40.0% | |
! | AGATCTTTTTGACATGGTGG+TGG | + | chr8.3:68397398-68397417 | None:intergenic | 40.0% |
! | AGCAGATCTTTTTGACATGG+TGG | + | chr8.3:68397401-68397420 | None:intergenic | 40.0% |
! | AGTCCTCTACGAAATTTTGG+AGG | + | chr8.3:68396442-68396461 | None:intergenic | 40.0% |
! | TACCACCTTTGATGATAACC+AGG | - | chr8.3:68396345-68396364 | MS.gene050983:CDS | 40.0% |
! | TCCTGGTGTTAAAAGCAACT+GGG | - | chr8.3:68396303-68396322 | MS.gene050983:CDS | 40.0% |
! | TGCTGAATTAGTCTCTATGC+CGG | - | chr8.3:68397035-68397054 | MS.gene050983:CDS | 40.0% |
! | TGGTCTTGACCGTAAGATTA+AGG | - | chr8.3:68396219-68396238 | MS.gene050983:CDS | 40.0% |
! | TTTTTACCTGGTAAGTCCCA+AGG | + | chr8.3:68396011-68396030 | None:intergenic | 40.0% |
!! | AAGTACTTTTCGGCTTGATG+AGG | + | chr8.3:68396739-68396758 | None:intergenic | 40.0% |
!! | GGGTTTTATGATTCCGAAAG+TGG | - | chr8.3:68396823-68396842 | MS.gene050983:intron | 40.0% |
!! | TTCCATATTCTTTTCTGGCG+AGG | + | chr8.3:68396701-68396720 | None:intergenic | 40.0% |
AAAGTGATGAAGGGAGAGAG+TGG | + | chr8.3:68395803-68395822 | None:intergenic | 45.0% | |
AATCTTACGGTCAAGACCAG+TGG | + | chr8.3:68396218-68396237 | None:intergenic | 45.0% | |
AGATGATTTCGGGGGATTTG+AGG | - | chr8.3:68397258-68397277 | MS.gene050983:CDS | 45.0% | |
CAAGCTCTTCATCTGTTGGA+CGG | + | chr8.3:68395902-68395921 | None:intergenic | 45.0% | |
GCATAGTATTCGCCTGAACT+AGG | + | chr8.3:68397229-68397248 | None:intergenic | 45.0% | |
TCGGAACTCATGTGTCTACT+TGG | + | chr8.3:68396546-68396565 | None:intergenic | 45.0% | |
! | CTCCTGGTGTTAAAAGCAAC+TGG | - | chr8.3:68396302-68396321 | MS.gene050983:CDS | 45.0% |
!! | TGGTTGGTCTTGGATGATAC+TGG | + | chr8.3:68397378-68397397 | None:intergenic | 45.0% |
!!! | ACCCAGTTGCTTTTAACACC+AGG | + | chr8.3:68396307-68396326 | None:intergenic | 45.0% |
!!! | CTTTTTGACATGGTGGTGGT+TGG | + | chr8.3:68397394-68397413 | None:intergenic | 45.0% |
AGCCGAGAAGAAAGCTGAAG+AGG | - | chr8.3:68396488-68396507 | MS.gene050983:CDS | 50.0% | |
GAAGGACACAGTGTGGATAC+TGG | - | chr8.3:68396188-68396207 | MS.gene050983:CDS | 50.0% | |
TGTGGATACTGGAAAGCCAC+TGG | - | chr8.3:68396199-68396218 | MS.gene050983:CDS | 50.0% | |
TTCGAACCTTGGGACTTACC+AGG | - | chr8.3:68396002-68396021 | MS.gene050983:intron | 50.0% | |
! | TCATTCTCAACGACTCGGAC+TGG | + | chr8.3:68396990-68397009 | None:intergenic | 50.0% |
!! | GACATGGTGGTGGTTGGTCT+TGG | + | chr8.3:68397388-68397407 | None:intergenic | 55.0% |
! | CTCAACGACTCGGACTGGAC+AGG | + | chr8.3:68396985-68397004 | None:intergenic | 60.0% |
! | CTCGGACTGGACAGGAAAGC+TGG | + | chr8.3:68396977-68396996 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 68395756 | 68397441 | 68395756 | ID=MS.gene050983 |
chr8.3 | mRNA | 68395756 | 68397441 | 68395756 | ID=MS.gene050983.t1;Parent=MS.gene050983 |
chr8.3 | exon | 68397174 | 68397441 | 68397174 | ID=MS.gene050983.t1.exon1;Parent=MS.gene050983.t1 |
chr8.3 | CDS | 68397174 | 68397441 | 68397174 | ID=cds.MS.gene050983.t1;Parent=MS.gene050983.t1 |
chr8.3 | exon | 68396831 | 68397096 | 68396831 | ID=MS.gene050983.t1.exon2;Parent=MS.gene050983.t1 |
chr8.3 | CDS | 68396831 | 68397096 | 68396831 | ID=cds.MS.gene050983.t1;Parent=MS.gene050983.t1 |
chr8.3 | exon | 68396595 | 68396741 | 68396595 | ID=MS.gene050983.t1.exon3;Parent=MS.gene050983.t1 |
chr8.3 | CDS | 68396595 | 68396741 | 68396595 | ID=cds.MS.gene050983.t1;Parent=MS.gene050983.t1 |
chr8.3 | exon | 68396141 | 68396512 | 68396141 | ID=MS.gene050983.t1.exon4;Parent=MS.gene050983.t1 |
chr8.3 | CDS | 68396141 | 68396512 | 68396141 | ID=cds.MS.gene050983.t1;Parent=MS.gene050983.t1 |
chr8.3 | exon | 68395756 | 68396013 | 68395756 | ID=MS.gene050983.t1.exon5;Parent=MS.gene050983.t1 |
chr8.3 | CDS | 68395756 | 68396013 | 68395756 | ID=cds.MS.gene050983.t1;Parent=MS.gene050983.t1 |
Gene Sequence |
Protein sequence |