Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051337.t1 | XP_013457215.2 | 92.7 | 384 | 24 | 3 | 7 | 388 | 1 | 382 | 1.80E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051337.t1 | A0A396IAU5 | 92.7 | 384 | 24 | 3 | 7 | 388 | 1 | 382 | 1.3e-147 | 532.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051337.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051337.t1 | MTR_4g094292 | 88.918 | 379 | 38 | 3 | 12 | 388 | 1 | 377 | 0.0 | 627 |
| MS.gene051337.t1 | MTR_4g094298 | 71.739 | 92 | 22 | 3 | 299 | 386 | 9 | 100 | 1.94e-36 | 128 |
| MS.gene051337.t1 | MTR_4g094358 | 72.727 | 66 | 16 | 1 | 299 | 362 | 9 | 74 | 5.24e-24 | 97.1 |
| MS.gene051337.t1 | MTR_6g033835 | 80.556 | 36 | 7 | 0 | 114 | 149 | 72 | 107 | 2.40e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 120 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCAATTCTCCGATTTA+TGG | 0.116513 | 4.1:-19405670 | MS.gene051337:CDS |
| TCAGCTACTTCAGTGGTTTC+AGG | 0.236813 | 4.1:+19401902 | None:intergenic |
| TACCTCAGATTTACTCTTCA+TGG | 0.246210 | 4.1:+19402219 | None:intergenic |
| TCATCATCTTCTTCTTCTTC+TGG | 0.266781 | 4.1:-19405403 | MS.gene051337:CDS |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.1:+19402016 | None:intergenic |
| GCATGAGTGCGATGAGGTTC+AGG | 0.301934 | 4.1:+19401947 | None:intergenic |
| CCGTACTCCGGCAACAGTTC+AGG | 0.302302 | 4.1:-19405616 | MS.gene051337:CDS |
| TATTGTGATGGATGATATTC+AGG | 0.326560 | 4.1:-19405464 | MS.gene051337:CDS |
| TCAGGAACAATGCGGCTATC+CGG | 0.378472 | 4.1:+19401920 | None:intergenic |
| GGAACTCTGTCTGAACCATT+TGG | 0.381458 | 4.1:+19401749 | None:intergenic |
| CTGGACTCATCGTTGTTGAT+TGG | 0.383003 | 4.1:+19405797 | None:intergenic |
| CTGTCCTTTCCTCCTGACAT+TGG | 0.385000 | 4.1:+19405436 | None:intergenic |
| GAGGTTCAGGGGAAGCTGGC+TGG | 0.386384 | 4.1:+19401960 | None:intergenic |
| GCGGGAACAAACCTGGCATT+TGG | 0.389416 | 4.1:+19405279 | None:intergenic |
| GCCGAGAACTTCGACGTTAC+CGG | 0.389780 | 4.1:-19405757 | MS.gene051337:CDS |
| TGAAGAAGGTTTCCAAGTTA+AGG | 0.391044 | 4.1:-19405885 | MS.gene051337:CDS |
| GCTTTCTTCAATTGAGAACT+TGG | 0.392003 | 4.1:-19405548 | MS.gene051337:CDS |
| TCAGGAACAATGCGACTATC+CGG | 0.396662 | 4.1:+19402034 | None:intergenic |
| CTTTATTGTGTAGGCACAGA+TGG | 0.404871 | 4.1:-19402095 | MS.gene051337:intron |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.1:-19402010 | MS.gene051337:CDS |
| CTCTTCATGGAGAGACAACT+TGG | 0.416746 | 4.1:+19402232 | None:intergenic |
| CTGATGGTGTTGGGATTGAC+AGG | 0.416902 | 4.1:+19401812 | None:intergenic |
| TGCAGAGCATGGGAGGAATC+TGG | 0.420303 | 4.1:-19405319 | MS.gene051337:CDS |
| CTCGTTCGAAGTCCTTAACT+TGG | 0.422674 | 4.1:+19405873 | None:intergenic |
| GAACTCTGTCTGAACCATTT+GGG | 0.424835 | 4.1:+19401750 | None:intergenic |
| GCCGGTAACGTCGAAGTTCT+CGG | 0.438838 | 4.1:+19405756 | None:intergenic |
| GCGGCGTAGGGTTGAAAACC+TGG | 0.445857 | 4.1:+19405778 | None:intergenic |
| TACTTACTGGAGCCATAAAT+CGG | 0.446103 | 4.1:+19405658 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.448018 | 4.1:+19401921 | None:intergenic |
| AACAATGCGGCTATCCGGGC+TGG | 0.449752 | 4.1:+19401925 | None:intergenic |
| AGATTGAGGCGAAGTTGGTT+GGG | 0.456658 | 4.1:+19401844 | None:intergenic |
| CGATGAGATTGAGGCGAAGT+TGG | 0.457573 | 4.1:+19401839 | None:intergenic |
| AGGTTCAGGGGAAGCTGGCT+GGG | 0.458963 | 4.1:+19401961 | None:intergenic |
| CAGCCTCAATGCCATCATCC+AGG | 0.459441 | 4.1:+19401777 | None:intergenic |
| AGAAGGAGGTTTGCAGAGCA+TGG | 0.460342 | 4.1:-19405330 | MS.gene051337:CDS |
| GAGATTGAGGCGAAGTTGGT+TGG | 0.460421 | 4.1:+19401843 | None:intergenic |
| CCTGAACTGTTGCCGGAGTA+CGG | 0.462019 | 4.1:+19405616 | None:intergenic |
| ATTGAGGCTGTCCTCCCAAA+TGG | 0.462042 | 4.1:-19401764 | MS.gene051337:CDS |
| GAGTGTGTTGTTTAAGAAGG+AGG | 0.464562 | 4.1:-19405344 | MS.gene051337:CDS |
| TGACCAGTCGCTGATGGTGT+TGG | 0.464996 | 4.1:+19401802 | None:intergenic |
| GAAGAGTGTGTTGTTTAAGA+AGG | 0.469448 | 4.1:-19405347 | MS.gene051337:CDS |
| AGCGAGCTGCGACGGCGAGC+CGG | 0.471289 | 4.1:+19405738 | None:intergenic |
| AGTGTTTGCGGCACTTTGCG+AGG | 0.476892 | 4.1:-19401657 | MS.gene051337:CDS |
| GACCAGTCGCTGATGGTGTT+GGG | 0.478745 | 4.1:+19401803 | None:intergenic |
| TCACTGGATTTAGCAGAAAT+CGG | 0.480187 | 4.1:+19405694 | None:intergenic |
| CGATGAGGTTCAGGGGAAGC+TGG | 0.482193 | 4.1:+19401956 | None:intergenic |
| GTGTTTGCGGCACTTTGCGA+GGG | 0.482529 | 4.1:-19401656 | MS.gene051337:CDS |
| TCGAAGTTCTCGGCGGCGTA+GGG | 0.488149 | 4.1:+19405766 | None:intergenic |
| AAGAAGACTACCAGTGTTTG+CGG | 0.493423 | 4.1:-19401669 | MS.gene051337:CDS |
| CGGAGAATTGAATGAGTCAC+TGG | 0.498104 | 4.1:+19405678 | None:intergenic |
| GATGAAGCTCTTCTCTTCCG+TGG | 0.504434 | 4.1:+19402254 | None:intergenic |
| CATGAGTGCGATGAGGTTCA+GGG | 0.509014 | 4.1:+19401948 | None:intergenic |
| GACTGGTCACCCCTGGATGA+TGG | 0.509897 | 4.1:-19401788 | MS.gene051337:CDS |
| CGTACTCCGGCAACAGTTCA+GGG | 0.510086 | 4.1:-19405615 | MS.gene051337:CDS |
| GATGTATCAGACGCCGGTGA+AGG | 0.511807 | 4.1:-19405500 | MS.gene051337:CDS |
| GTCGAAGTTCTCGGCGGCGT+AGG | 0.512563 | 4.1:+19405765 | None:intergenic |
| CTTGCAAGTCTTGTGACTAC+AGG | 0.513276 | 4.1:+19401869 | None:intergenic |
| GAAGGAGGTTTGCAGAGCAT+GGG | 0.513507 | 4.1:-19405329 | MS.gene051337:CDS |
| TCATCCAACTCGATCATCAA+TGG | 0.518876 | 4.1:+19405841 | None:intergenic |
| CATCAGCGACTGGTCACCCC+TGG | 0.525662 | 4.1:-19401795 | MS.gene051337:CDS |
| CTTGCAAGTCTTGTGACTAA+AGG | 0.531988 | 4.1:+19401986 | None:intergenic |
| ATTCAGGTGAGGCCAATGTC+AGG | 0.532076 | 4.1:-19405448 | MS.gene051337:CDS |
| GAGGCCAATGTCAGGAGGAA+AGG | 0.532703 | 4.1:-19405440 | MS.gene051337:CDS |
| ATGAAGCTCTTCTCTTCCGT+GGG | 0.538111 | 4.1:+19402255 | None:intergenic |
| TTTATTGTGTAGGCACAGAT+GGG | 0.538263 | 4.1:-19402094 | MS.gene051337:intron |
| GTTCAGACAGAGTTCCCTCT+AGG | 0.542921 | 4.1:-19401742 | MS.gene051337:CDS |
| GGAGGTTTGCAGAGCATGGG+AGG | 0.543989 | 4.1:-19405326 | MS.gene051337:CDS |
| AAGTATTTAGCGAGCTGCGA+CGG | 0.544538 | 4.1:+19405730 | None:intergenic |
| TTTATGGCTCCAGTAAGTAC+AGG | 0.546704 | 4.1:-19405654 | MS.gene051337:CDS |
| TCATCGCACTCATGCCAGCC+CGG | 0.549587 | 4.1:-19401939 | MS.gene051337:CDS |
| CCGCTATGACTCCAAATGCC+AGG | 0.551499 | 4.1:-19405290 | MS.gene051337:intron |
| TTCGCCATTGATGATCGAGT+TGG | 0.551669 | 4.1:-19405845 | MS.gene051337:CDS |
| AGCTGATTCAGCTACTTCAG+TGG | 0.552361 | 4.1:+19401895 | None:intergenic |
| CAGGGGTGACCAGTCGCTGA+TGG | 0.559234 | 4.1:+19401796 | None:intergenic |
| CAGGAACAATGCGACTATCC+GGG | 0.559706 | 4.1:+19402035 | None:intergenic |
| AGCCTCAATGCCATCATCCA+GGG | 0.563569 | 4.1:+19401778 | None:intergenic |
| CAATCAACAACGATGAGTCC+AGG | 0.566783 | 4.1:-19405796 | MS.gene051337:CDS |
| GAACAACAGCAAGATGAAGA+AGG | 0.574444 | 4.1:-19405899 | MS.gene051337:CDS |
| ACTCTTCGAAGACGAAGAAG+AGG | 0.574667 | 4.1:+19405363 | None:intergenic |
| ACAGGGGTACGATGAGATTG+AGG | 0.577431 | 4.1:+19401830 | None:intergenic |
| ATGTATCAGACGCCGGTGAA+GGG | 0.578599 | 4.1:-19405499 | MS.gene051337:CDS |
| TACTCCGGCAACAGTTCAGG+GGG | 0.579941 | 4.1:-19405613 | MS.gene051337:CDS |
| TCGCAAAGTGCCGCAAACAC+TGG | 0.580686 | 4.1:+19401659 | None:intergenic |
| CTTCAATTGAGAACTTGGAG+AGG | 0.582756 | 4.1:-19405543 | MS.gene051337:CDS |
| TTCAGACAGAGTTCCCTCTA+GGG | 0.586505 | 4.1:-19401741 | MS.gene051337:CDS |
| AAGTTCTCAATTGAAGAAAG+CGG | 0.591154 | 4.1:+19405550 | None:intergenic |
| ACTGAAGTAGCTGAATCAGC+TGG | 0.591905 | 4.1:-19401893 | MS.gene051337:CDS |
| ATCCCAACACCATCAGCGAC+TGG | 0.592240 | 4.1:-19401805 | MS.gene051337:CDS |
| ACCCCTGGATGATGGCATTG+AGG | 0.599820 | 4.1:-19401780 | MS.gene051337:CDS |
| ACTTCCTCACCACCCTTCAC+CGG | 0.613181 | 4.1:+19405487 | None:intergenic |
| GCATCAACTTCCTCCCTAGA+GGG | 0.614358 | 4.1:+19401728 | None:intergenic |
| CTCTGTCTGAACCATTTGGG+AGG | 0.615742 | 4.1:+19401753 | None:intergenic |
| CTCCATGAAGAGTAAATCTG+AGG | 0.616657 | 4.1:-19402221 | MS.gene051337:intron |
| GACGCCGGTGAAGGGTGGTG+AGG | 0.621390 | 4.1:-19405491 | MS.gene051337:CDS |
| TGCATCAACTTCCTCCCTAG+AGG | 0.621656 | 4.1:+19401727 | None:intergenic |
| TGTTTGCGGCACTTTGCGAG+GGG | 0.624671 | 4.1:-19401655 | MS.gene051337:CDS |
| ATTGTGTAGGCACAGATGGG+CGG | 0.625772 | 4.1:-19402091 | MS.gene051337:intron |
| AGGACTGTGCTTGTATGACC+CGG | 0.627217 | 4.1:-19402053 | MS.gene051337:CDS |
| TATCAGACGCCGGTGAAGGG+TGG | 0.632611 | 4.1:-19405496 | MS.gene051337:CDS |
| TGGTGAGGAAGTTATTGTGA+TGG | 0.633081 | 4.1:-19405476 | MS.gene051337:CDS |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.1:+19402009 | None:intergenic |
| AGACAGAGTTCCCTCTAGGG+AGG | 0.648644 | 4.1:-19401738 | MS.gene051337:CDS |
| GCCTCAATGCCATCATCCAG+GGG | 0.652087 | 4.1:+19401779 | None:intergenic |
| TGATGGTGTTGGGATTGACA+GGG | 0.653379 | 4.1:+19401813 | None:intergenic |
| GTACTCCGGCAACAGTTCAG+GGG | 0.653779 | 4.1:-19405614 | MS.gene051337:CDS |
| AGTAGTAGCTTCAGTTCTCG+CGG | 0.659393 | 4.1:-19405589 | MS.gene051337:CDS |
| GCCGCGGATGTATCAGACGC+CGG | 0.668223 | 4.1:-19405506 | MS.gene051337:CDS |
| ATGAGTGCGATGAGGTTCAG+GGG | 0.671572 | 4.1:+19401949 | None:intergenic |
| GGGCTGGCATGAGTGCGATG+AGG | 0.673771 | 4.1:+19401941 | None:intergenic |
| CAGGTGAGGCCAATGTCAGG+AGG | 0.674041 | 4.1:-19405445 | MS.gene051337:CDS |
| GGAAGCAGCTCTCGTCGCCG+CGG | 0.681014 | 4.1:-19405522 | MS.gene051337:CDS |
| GAACTGTTGCCGGAGTACGG+TGG | 0.688179 | 4.1:+19405619 | None:intergenic |
| ACCGGCGTCTGATACATCCG+CGG | 0.697484 | 4.1:+19405505 | None:intergenic |
| GATGGTGTTGGGATTGACAG+GGG | 0.706471 | 4.1:+19401814 | None:intergenic |
| CCTGGCATTTGGAGTCATAG+CGG | 0.709847 | 4.1:+19405290 | None:intergenic |
| ATCGAGTTGGATGATAACAG+AGG | 0.715067 | 4.1:-19405832 | MS.gene051337:CDS |
| CAGTGGTTTCAGGAACAATG+CGG | 0.725745 | 4.1:+19401912 | None:intergenic |
| TGATGGATGATATTCAGGTG+AGG | 0.744981 | 4.1:-19405459 | MS.gene051337:CDS |
| ACTCCGGCAACAGTTCAGGG+GGG | 0.773344 | 4.1:-19405612 | MS.gene051337:CDS |
| GGTAACGTCGAAGTTCTCGG+CGG | 0.777146 | 4.1:+19405759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAGTAAATAAAAAAG+TGG | - | chr4.1:19404836-19404855 | MS.gene051337:intron | 10.0% |
| !! | TACAACTTATTAAAATTATT+TGG | - | chr4.1:19404628-19404647 | MS.gene051337:intron | 10.0% |
| !! | TATCTTATTAAATTTGATAT+AGG | + | chr4.1:19403880-19403899 | None:intergenic | 10.0% |
| !!! | TTTATCTTTTGTTATAAAAA+TGG | - | chr4.1:19404657-19404676 | MS.gene051337:intron | 10.0% |
| !! | GATGATTGTAATTAAAATTT+GGG | + | chr4.1:19403750-19403769 | None:intergenic | 15.0% |
| !! | TAAGAAAGAATATATTAAGA+TGG | - | chr4.1:19403330-19403349 | MS.gene051337:intron | 15.0% |
| !! | TGATGATTGTAATTAAAATT+TGG | + | chr4.1:19403751-19403770 | None:intergenic | 15.0% |
| !! | TGTCTATTTAAATTAGAATT+AGG | + | chr4.1:19403983-19404002 | None:intergenic | 15.0% |
| !! | TTATATGTATTCTCTAATTA+AGG | - | chr4.1:19402474-19402493 | MS.gene051337:intron | 15.0% |
| !!! | TATGATTAAGATAATTTTTG+TGG | - | chr4.1:19405054-19405073 | MS.gene051337:intron | 15.0% |
| !! | AAGTCAATAATATCTTATAC+AGG | + | chr4.1:19405217-19405236 | None:intergenic | 20.0% |
| !! | AGAATTGTATTCATCTTAAT+TGG | - | chr4.1:19402408-19402427 | MS.gene051337:intron | 20.0% |
| !! | ATAAATATTCGATTTCCATT+AGG | - | chr4.1:19402619-19402638 | MS.gene051337:intron | 20.0% |
| !! | ATAGAACAAATCTAAATCAT+TGG | - | chr4.1:19403935-19403954 | MS.gene051337:intron | 20.0% |
| !! | ATTTAACCATTTATCCAAAT+AGG | - | chr4.1:19404728-19404747 | MS.gene051337:intron | 20.0% |
| !! | CATTGAATTCATAATAGTTA+TGG | + | chr4.1:19402314-19402333 | None:intergenic | 20.0% |
| !! | TACTTTAATGACAATGAAAA+TGG | + | chr4.1:19402513-19402532 | None:intergenic | 20.0% |
| !!! | AACGAAAATAGATTGTATTT+TGG | - | chr4.1:19404009-19404028 | MS.gene051337:intron | 20.0% |
| !!! | TAAGATATTATTGACTTCTA+TGG | - | chr4.1:19405220-19405239 | MS.gene051337:intron | 20.0% |
| !!! | TTTTAGATTTAGCATTTGTT+TGG | - | chr4.1:19402866-19402885 | MS.gene051337:intron | 20.0% |
| ! | AAATCAGAATAACCTATACA+TGG | + | chr4.1:19403470-19403489 | None:intergenic | 25.0% |
| ! | AAATTACTTTCCCAAAAACA+AGG | - | chr4.1:19403530-19403549 | MS.gene051337:intron | 25.0% |
| ! | ACTTATAGCATAAGTTCTTA+TGG | + | chr4.1:19404703-19404722 | None:intergenic | 25.0% |
| ! | AGATTCTTAATCAAACTATC+TGG | + | chr4.1:19404352-19404371 | None:intergenic | 25.0% |
| ! | ATGCACTTAATAGTTAATAC+AGG | + | chr4.1:19402544-19402563 | None:intergenic | 25.0% |
| ! | CAAACAAACTGACTATAAAT+TGG | - | chr4.1:19403206-19403225 | MS.gene051337:intron | 25.0% |
| ! | CATAATAAACACCTAATTAG+CGG | - | chr4.1:19405408-19405427 | MS.gene051337:CDS | 25.0% |
| ! | GATAGTTTGATTAAGAATCT+TGG | - | chr4.1:19404352-19404371 | MS.gene051337:intron | 25.0% |
| ! | TCTGTAGAATTGTATATTGA+GGG | - | chr4.1:19404434-19404453 | MS.gene051337:intron | 25.0% |
| ! | TGAATTCATAATAGTTATGG+CGG | + | chr4.1:19402311-19402330 | None:intergenic | 25.0% |
| ! | TTAGGTGTTTATTATGCTTA+AGG | + | chr4.1:19405404-19405423 | None:intergenic | 25.0% |
| !! | AATTCAATGATTCCTGTTTT+TGG | - | chr4.1:19402325-19402344 | MS.gene051337:intron | 25.0% |
| !! | ATTTCATGGAGCAATAATTT+TGG | - | chr4.1:19403631-19403650 | MS.gene051337:intron | 25.0% |
| !! | CACAAGTTTCTTGTTTAATT+GGG | - | chr4.1:19403412-19403431 | MS.gene051337:intron | 25.0% |
| !! | GTATAGGTTATTCTGATTTT+GGG | - | chr4.1:19403471-19403490 | MS.gene051337:intron | 25.0% |
| !! | TCACAAGTTTCTTGTTTAAT+TGG | - | chr4.1:19403411-19403430 | MS.gene051337:intron | 25.0% |
| !! | TGTATAGGTTATTCTGATTT+TGG | - | chr4.1:19403470-19403489 | MS.gene051337:intron | 25.0% |
| !! | TTAGCATTTGTTTGGAATTA+CGG | - | chr4.1:19402874-19402893 | MS.gene051337:intron | 25.0% |
| !!! | AGCAATAATTTTGGTATGAT+CGG | - | chr4.1:19403640-19403659 | MS.gene051337:intron | 25.0% |
| !!! | TAGTAAATTTGCTGAAATCA+CGG | + | chr4.1:19402579-19402598 | None:intergenic | 25.0% |
| !!! | TGTTGTTTCATTATAAACCT+AGG | - | chr4.1:19403554-19403573 | MS.gene051337:intron | 25.0% |
| !!! | TTGTTTTTGGGAAAGTAATT+TGG | + | chr4.1:19403531-19403550 | None:intergenic | 25.0% |
| AAAAAGTGGCATAGAATGAT+AGG | - | chr4.1:19404850-19404869 | MS.gene051337:intron | 30.0% | |
| AAAACACAACTTGCAAACAA+GGG | - | chr4.1:19402678-19402697 | MS.gene051337:intron | 30.0% | |
| AAAAGTGGCATAGAATGATA+GGG | - | chr4.1:19404851-19404870 | MS.gene051337:intron | 30.0% | |
| AAGTTCTCAATTGAAGAAAG+CGG | + | chr4.1:19402021-19402040 | None:intergenic | 30.0% | |
| ATCTTATCACAGAACATCTA+TGG | - | chr4.1:19405172-19405191 | MS.gene051337:intron | 30.0% | |
| ATGACACTGTAACTAATTGA+TGG | - | chr4.1:19404934-19404953 | MS.gene051337:intron | 30.0% | |
| ATTAGGCTGTAGTTGTTTAA+AGG | - | chr4.1:19402636-19402655 | MS.gene051337:intron | 30.0% | |
| CTCTGTAGAATTGTATATTG+AGG | - | chr4.1:19404433-19404452 | MS.gene051337:intron | 30.0% | |
| GAAATACTTAACCGCTAATT+AGG | + | chr4.1:19405422-19405441 | None:intergenic | 30.0% | |
| GAATTCATAATAGTTATGGC+GGG | + | chr4.1:19402310-19402329 | None:intergenic | 30.0% | |
| GATCATATATCGCACTTTAT+AGG | + | chr4.1:19403047-19403066 | None:intergenic | 30.0% | |
| GCATTTCTTCTTTATTGTGT+AGG | - | chr4.1:19405464-19405483 | MS.gene051337:CDS | 30.0% | |
| GTATAGAACTATAGATGTCA+AGG | + | chr4.1:19404148-19404167 | None:intergenic | 30.0% | |
| GTGATTTCAGCAAATTTACT+AGG | - | chr4.1:19402578-19402597 | MS.gene051337:intron | 30.0% | |
| GTGTTAGGCTTTCTATATAA+GGG | - | chr4.1:19405007-19405026 | MS.gene051337:intron | 30.0% | |
| GTTTATTATGCTTAAGGACA+AGG | + | chr4.1:19405398-19405417 | None:intergenic | 30.0% | |
| TAAAACACAACTTGCAAACA+AGG | - | chr4.1:19402677-19402696 | MS.gene051337:intron | 30.0% | |
| TATCCAGCAATTCAACATTT+AGG | + | chr4.1:19404755-19404774 | None:intergenic | 30.0% | |
| TATTGCTCCATGAAATTAAC+CGG | + | chr4.1:19403627-19403646 | None:intergenic | 30.0% | |
| TCATTCAATTCTCCGATTTA+TGG | - | chr4.1:19401898-19401917 | MS.gene051337:CDS | 30.0% | |
| TGTAGTTATGCAGAATTCTA+TGG | - | chr4.1:19404540-19404559 | MS.gene051337:intron | 30.0% | |
| TGTGTTAGGCTTTCTATATA+AGG | - | chr4.1:19405006-19405025 | MS.gene051337:intron | 30.0% | |
| TTAAATTCTGCAATCTCTGT+TGG | - | chr4.1:19404180-19404199 | MS.gene051337:intron | 30.0% | |
| TTAGGTCCTATTTGGATAAA+TGG | + | chr4.1:19404737-19404756 | None:intergenic | 30.0% | |
| TTCAACATTTAGGTCCTATT+TGG | + | chr4.1:19404745-19404764 | None:intergenic | 30.0% | |
| TTCTATATAAGGGAGTCATA+AGG | - | chr4.1:19405017-19405036 | MS.gene051337:intron | 30.0% | |
| TTGTATATTGAGGGTCTATT+TGG | - | chr4.1:19404443-19404462 | MS.gene051337:intron | 30.0% | |
| TTTAAACAACTACAGCCTAA+TGG | + | chr4.1:19402637-19402656 | None:intergenic | 30.0% | |
| TTTGGGAAAGTAATTTGGTT+TGG | + | chr4.1:19403526-19403545 | None:intergenic | 30.0% | |
| ! | AAATTGCGTTTAGAAAGCAT+TGG | - | chr4.1:19402952-19402971 | MS.gene051337:intron | 30.0% |
| ! | ACTATTTAGAGACCTTTTCT+TGG | - | chr4.1:19402721-19402740 | MS.gene051337:intron | 30.0% |
| ! | CTATTTAGAGACCTTTTCTT+GGG | - | chr4.1:19402722-19402741 | MS.gene051337:intron | 30.0% |
| ! | TTGGGAAAGTAATTTGGTTT+GGG | + | chr4.1:19403525-19403544 | None:intergenic | 30.0% |
| !! | AATTGCGTTTAGAAAGCATT+GGG | - | chr4.1:19402953-19402972 | MS.gene051337:intron | 30.0% |
| !! | AGTTAGTTGTTTGTTGTGTT+AGG | - | chr4.1:19404992-19405011 | MS.gene051337:intron | 30.0% |
| !! | GTTGGTTTCTTTTCGTTTTT+TGG | - | chr4.1:19404198-19404217 | MS.gene051337:intron | 30.0% |
| !! | TATTGTGATGGATGATATTC+AGG | - | chr4.1:19402104-19402123 | MS.gene051337:intron | 30.0% |
| !! | TTTAGATCTTTTGAGTCCAT+GGG | + | chr4.1:19403813-19403832 | None:intergenic | 30.0% |
| !!! | AAGTTGTGTTTTAGTCCTTT+GGG | + | chr4.1:19402670-19402689 | None:intergenic | 30.0% |
| !!! | GAAACAACAACCTTGTTTTT+GGG | + | chr4.1:19403543-19403562 | None:intergenic | 30.0% |
| !!! | GAAGTTGATGCATACATTTT+TGG | - | chr4.1:19405852-19405871 | MS.gene051337:CDS | 30.0% |
| !!! | TGAAACAACAACCTTGTTTT+TGG | + | chr4.1:19403544-19403563 | None:intergenic | 30.0% |
| AAAGTGGCATAGAATGATAG+GGG | - | chr4.1:19404852-19404871 | MS.gene051337:intron | 35.0% | |
| AAGCACCTGTAAAACTGTTT+GGG | - | chr4.1:19404496-19404515 | MS.gene051337:intron | 35.0% | |
| ACATTACAGCTAGTGAGTTA+TGG | - | chr4.1:19404968-19404987 | MS.gene051337:intron | 35.0% | |
| AGGTGTGATGATTTACTTCA+CGG | + | chr4.1:19403262-19403281 | None:intergenic | 35.0% | |
| ATATCGTAATGCGTGTTCTA+AGG | + | chr4.1:19403116-19403135 | None:intergenic | 35.0% | |
| ATATGATGAAACAACAGCCT+AGG | + | chr4.1:19403574-19403593 | None:intergenic | 35.0% | |
| ATTAATATATGGGTACCCCA+TGG | - | chr4.1:19403794-19403813 | MS.gene051337:intron | 35.0% | |
| ATTGCTCCATGAAATTAACC+GGG | + | chr4.1:19403626-19403645 | None:intergenic | 35.0% | |
| CACAAATACAACCCAAGAAA+AGG | + | chr4.1:19402736-19402755 | None:intergenic | 35.0% | |
| CTACTGTATACCTTCCTAAT+AGG | + | chr4.1:19404888-19404907 | None:intergenic | 35.0% | |
| GAAGTAAATCATCACACCTA+CGG | - | chr4.1:19403263-19403282 | MS.gene051337:intron | 35.0% | |
| GACATTCCTTATGCACTAAA+AGG | + | chr4.1:19404226-19404245 | None:intergenic | 35.0% | |
| GCTTTCTTCAATTGAGAACT+TGG | - | chr4.1:19402020-19402039 | MS.gene051337:CDS | 35.0% | |
| GGCATAAATAATTTCCCATC+AGG | + | chr4.1:19402831-19402850 | None:intergenic | 35.0% | |
| GTCATAAGGTTAGTAGTAGA+AGG | - | chr4.1:19405031-19405050 | MS.gene051337:intron | 35.0% | |
| TAAGCACCTGTAAAACTGTT+TGG | - | chr4.1:19404495-19404514 | MS.gene051337:intron | 35.0% | |
| TACATTTGGATGCTAGAGTT+TGG | - | chr4.1:19404806-19404825 | MS.gene051337:intron | 35.0% | |
| TACCTCAGATTTACTCTTCA+TGG | + | chr4.1:19405352-19405371 | None:intergenic | 35.0% | |
| TACTTACTGGAGCCATAAAT+CGG | + | chr4.1:19401913-19401932 | None:intergenic | 35.0% | |
| TATCGCACTTTATAGGTGTT+TGG | + | chr4.1:19403040-19403059 | None:intergenic | 35.0% | |
| TCACTGGATTTAGCAGAAAT+CGG | + | chr4.1:19401877-19401896 | None:intergenic | 35.0% | |
| TCATCATCTTCTTCTTCTTC+TGG | - | chr4.1:19402165-19402184 | MS.gene051337:intron | 35.0% | |
| TCGTTCATAGCATTCATTCT+AGG | + | chr4.1:19403597-19403616 | None:intergenic | 35.0% | |
| TGAAAACTGTCTCCTTGAAT+TGG | + | chr4.1:19404070-19404089 | None:intergenic | 35.0% | |
| TGAAGAAGGTTTCCAAGTTA+AGG | - | chr4.1:19401683-19401702 | MS.gene051337:CDS | 35.0% | |
| TGGCTCTCTTAAAAATTACG+AGG | - | chr4.1:19403350-19403369 | MS.gene051337:intron | 35.0% | |
| TGTAAGAGTAAAGTTCTCTC+CGG | + | chr4.1:19403140-19403159 | None:intergenic | 35.0% | |
| TTAACCAGACCATGATACTA+GGG | - | chr4.1:19404313-19404332 | MS.gene051337:intron | 35.0% | |
| TTATTTCCATTTGCGCTCAA+TGG | - | chr4.1:19404586-19404605 | MS.gene051337:intron | 35.0% | |
| TTGCATCAAAAGCCAAAAAC+AGG | + | chr4.1:19402340-19402359 | None:intergenic | 35.0% | |
| TTTATTGTGTAGGCACAGAT+GGG | - | chr4.1:19405474-19405493 | MS.gene051337:CDS | 35.0% | |
| ! | AGATAATTTTTGTGGAGTCC+AGG | - | chr4.1:19405062-19405081 | MS.gene051337:intron | 35.0% |
| ! | AGTAGTTCATTTTGTCCTGA+TGG | - | chr4.1:19402813-19402832 | MS.gene051337:intron | 35.0% |
| ! | CTATAGTTCTATACGCAGTT+GGG | - | chr4.1:19404154-19404173 | MS.gene051337:intron | 35.0% |
| ! | CTATTAGGAAGGTATACAGT+AGG | - | chr4.1:19404886-19404905 | MS.gene051337:intron | 35.0% |
| ! | GGTAGTCTTCTTTTAGTAGT+CGG | + | chr4.1:19405891-19405910 | None:intergenic | 35.0% |
| ! | GTAGTTCATTTTGTCCTGAT+GGG | - | chr4.1:19402814-19402833 | MS.gene051337:intron | 35.0% |
| ! | TCTATAGTTCTATACGCAGT+TGG | - | chr4.1:19404153-19404172 | MS.gene051337:intron | 35.0% |
| ! | TTGGTTCCTTTTAGTGCATA+AGG | - | chr4.1:19404217-19404236 | MS.gene051337:intron | 35.0% |
| ! | TTTTGCTAACCTGTACTTAC+TGG | + | chr4.1:19401926-19401945 | None:intergenic | 35.0% |
| !! | ACTGCTTGTTGATTTCTGAA+TGG | - | chr4.1:19404774-19404793 | MS.gene051337:intron | 35.0% |
| !! | AGGTTATTCTGATTTTGGGA+TGG | - | chr4.1:19403475-19403494 | MS.gene051337:intron | 35.0% |
| !! | CTGCTTGTTGATTTCTGAAT+GGG | - | chr4.1:19404775-19404794 | MS.gene051337:intron | 35.0% |
| !! | CTTTAGATCTTTTGAGTCCA+TGG | + | chr4.1:19403814-19403833 | None:intergenic | 35.0% |
| !! | GAAGAGTGTGTTGTTTAAGA+AGG | - | chr4.1:19402221-19402240 | MS.gene051337:intron | 35.0% |
| !! | TGCTTGTTGATTTCTGAATG+GGG | - | chr4.1:19404776-19404795 | MS.gene051337:intron | 35.0% |
| !! | TTAGATCTTTTGAGTCCATG+GGG | + | chr4.1:19403812-19403831 | None:intergenic | 35.0% |
| !!! | CAAGTTGTGTTTTAGTCCTT+TGG | + | chr4.1:19402671-19402690 | None:intergenic | 35.0% |
| !!! | GGTTATTCTGATTTTGGGAT+GGG | - | chr4.1:19403476-19403495 | MS.gene051337:intron | 35.0% |
| AAACTACCATTGAGCGCAAA+TGG | + | chr4.1:19404595-19404614 | None:intergenic | 40.0% | |
| AAACTGTCTCCTTGAATTGG+TGG | + | chr4.1:19404067-19404086 | None:intergenic | 40.0% | |
| AAGAAGACTACCAGTGTTTG+CGG | - | chr4.1:19405899-19405918 | MS.gene051337:CDS | 40.0% | |
| AAGATCTCCAGTTCAAATCC+AGG | + | chr4.1:19403237-19403256 | None:intergenic | 40.0% | |
| AATGGGGAATGTGGTACATT+TGG | - | chr4.1:19404792-19404811 | MS.gene051337:intron | 40.0% | |
| ACTAGGATCTCCTATTAGGA+AGG | - | chr4.1:19404875-19404894 | MS.gene051337:intron | 40.0% | |
| ACTTTGGATCCCTAGTATCA+TGG | + | chr4.1:19404325-19404344 | None:intergenic | 40.0% | |
| AGGCTGTAGTTGTTTAAAGG+AGG | - | chr4.1:19402639-19402658 | MS.gene051337:intron | 40.0% | |
| CAGCAATGACAACAAAGACT+CGG | + | chr4.1:19404281-19404300 | None:intergenic | 40.0% | |
| CTAAAACAATCGCGCATTAG+AGG | + | chr4.1:19402852-19402871 | None:intergenic | 40.0% | |
| CTCCATGAAGAGTAAATCTG+AGG | - | chr4.1:19405347-19405366 | MS.gene051337:CDS | 40.0% | |
| CTTCAATTGAGAACTTGGAG+AGG | - | chr4.1:19402025-19402044 | MS.gene051337:CDS | 40.0% | |
| CTTGTTTAATTGGGCCAGAT+AGG | - | chr4.1:19403421-19403440 | MS.gene051337:intron | 40.0% | |
| CTTTATTGTGTAGGCACAGA+TGG | - | chr4.1:19405473-19405492 | MS.gene051337:CDS | 40.0% | |
| GAACAACAGCAAGATGAAGA+AGG | - | chr4.1:19401669-19401688 | MS.gene051337:CDS | 40.0% | |
| GAACACGCATTACGATATAC+CGG | - | chr4.1:19403118-19403137 | MS.gene051337:intron | 40.0% | |
| GAACTCTGTCTGAACCATTT+GGG | + | chr4.1:19405821-19405840 | None:intergenic | 40.0% | |
| GACTATAAATTGGACCATCC+TGG | - | chr4.1:19403216-19403235 | MS.gene051337:intron | 40.0% | |
| GGACCTAAATGTTGAATTGC+TGG | - | chr4.1:19404749-19404768 | MS.gene051337:intron | 40.0% | |
| GTTAACCAGACCATGATACT+AGG | - | chr4.1:19404312-19404331 | MS.gene051337:intron | 40.0% | |
| TCAACTGAGATGCCAATATC+AGG | + | chr4.1:19403666-19403685 | None:intergenic | 40.0% | |
| TCATCCAACTCGATCATCAA+TGG | + | chr4.1:19401730-19401749 | None:intergenic | 40.0% | |
| TCTTCTTCTTCTTCTGGTAG+AGG | - | chr4.1:19402171-19402190 | MS.gene051337:intron | 40.0% | |
| TGATTTCTGAATGGGGAATG+TGG | - | chr4.1:19404783-19404802 | MS.gene051337:intron | 40.0% | |
| TGGTGAGGAAGTTATTGTGA+TGG | - | chr4.1:19402092-19402111 | MS.gene051337:intron | 40.0% | |
| TTAAAGGAGGATTGTCCCAA+AGG | - | chr4.1:19402652-19402671 | MS.gene051337:intron | 40.0% | |
| TTTATGGCTCCAGTAAGTAC+AGG | - | chr4.1:19401914-19401933 | MS.gene051337:CDS | 40.0% | |
| ! | AAGGAGACAGTTTTCACACA+AGG | - | chr4.1:19404074-19404093 | MS.gene051337:intron | 40.0% |
| ! | ACAGTTTTCACACAAGGGTT+TGG | - | chr4.1:19404080-19404099 | MS.gene051337:intron | 40.0% |
| ! | AGGAGACAGTTTTCACACAA+GGG | - | chr4.1:19404075-19404094 | MS.gene051337:intron | 40.0% |
| ! | ATCCTTTTACAGTTTGCCCA+CGG | - | chr4.1:19405297-19405316 | MS.gene051337:CDS | 40.0% |
| ! | CATTTGTTTGGAATTACGGC+GGG | - | chr4.1:19402878-19402897 | MS.gene051337:intron | 40.0% |
| ! | CTGGTAGTGATTCCATGTAT+AGG | - | chr4.1:19403455-19403474 | MS.gene051337:intron | 40.0% |
| ! | CTTGCAAGTCTTGTGACTAA+AGG | + | chr4.1:19405585-19405604 | None:intergenic | 40.0% |
| ! | GCATTTGTTTGGAATTACGG+CGG | - | chr4.1:19402877-19402896 | MS.gene051337:intron | 40.0% |
| ! | TAGGAAGGTATACAGTAGGA+GGG | - | chr4.1:19404890-19404909 | MS.gene051337:intron | 40.0% |
| ! | TGATGGATGATATTCAGGTG+AGG | - | chr4.1:19402109-19402128 | MS.gene051337:intron | 40.0% |
| ! | TTAGGAAGGTATACAGTAGG+AGG | - | chr4.1:19404889-19404908 | MS.gene051337:intron | 40.0% |
| ! | TTTCTAGTCAATCGCGCATT+AGG | + | chr4.1:19402911-19402930 | None:intergenic | 40.0% |
| !! | AATGCGTGTTCTAAGGTGTT+TGG | + | chr4.1:19403109-19403128 | None:intergenic | 40.0% |
| !! | ATCGAGTTGGATGATAACAG+AGG | - | chr4.1:19401736-19401755 | MS.gene051337:CDS | 40.0% |
| !! | GAGTGTGTTGTTTAAGAAGG+AGG | - | chr4.1:19402224-19402243 | MS.gene051337:CDS | 40.0% |
| !! | GGATGCTTTACTGACTTGTT+TGG | + | chr4.1:19403007-19403026 | None:intergenic | 40.0% |
| AAGTATTTAGCGAGCTGCGA+CGG | + | chr4.1:19401841-19401860 | None:intergenic | 45.0% | |
| ACACCTACGGTCTATCCAAT+TGG | - | chr4.1:19403276-19403295 | MS.gene051337:intron | 45.0% | |
| ACTCTTCGAAGACGAAGAAG+AGG | + | chr4.1:19402208-19402227 | None:intergenic | 45.0% | |
| ACTGAAGTAGCTGAATCAGC+TGG | - | chr4.1:19405675-19405694 | MS.gene051337:CDS | 45.0% | |
| AGGTATACAGTAGGAGGGAT+AGG | - | chr4.1:19404895-19404914 | MS.gene051337:intron | 45.0% | |
| AGTAGTAGCTTCAGTTCTCG+CGG | - | chr4.1:19401979-19401998 | MS.gene051337:CDS | 45.0% | |
| ATACAGTAGGAGGGATAGGA+GGG | - | chr4.1:19404899-19404918 | MS.gene051337:intron | 45.0% | |
| ATGAAGCTCTTCTCTTCCGT+GGG | + | chr4.1:19405316-19405335 | None:intergenic | 45.0% | |
| ATGTCCATAAGCGTGTAACG+TGG | - | chr4.1:19403165-19403184 | MS.gene051337:intron | 45.0% | |
| CAAACTATCTGGCCACACTT+TGG | + | chr4.1:19404341-19404360 | None:intergenic | 45.0% | |
| CAATCAACAACGATGAGTCC+AGG | - | chr4.1:19401772-19401791 | MS.gene051337:CDS | 45.0% | |
| CACCTACGGTCTATCCAATT+GGG | - | chr4.1:19403277-19403296 | MS.gene051337:intron | 45.0% | |
| CAGATAGGAAATTTGCCTGC+TGG | - | chr4.1:19403436-19403455 | MS.gene051337:intron | 45.0% | |
| CAGCAGGCAAATTTCCTATC+TGG | + | chr4.1:19403438-19403457 | None:intergenic | 45.0% | |
| CAGTGGTTTCAGGAACAATG+CGG | + | chr4.1:19405659-19405678 | None:intergenic | 45.0% | |
| CCAGACACATACACCCTTAT+TGG | + | chr4.1:19402778-19402797 | None:intergenic | 45.0% | |
| CGGAGAATTGAATGAGTCAC+TGG | + | chr4.1:19401893-19401912 | None:intergenic | 45.0% | |
| CGTTGCGACAAAATTTCTCG+CGG | + | chr4.1:19402979-19402998 | None:intergenic | 45.0% | |
| CTCGTTCGAAGTCCTTAACT+TGG | + | chr4.1:19401698-19401717 | None:intergenic | 45.0% | |
| CTCTTCATGGAGAGACAACT+TGG | + | chr4.1:19405339-19405358 | None:intergenic | 45.0% | |
| CTGCAACCCGGTTAATTTCA+TGG | - | chr4.1:19403617-19403636 | MS.gene051337:intron | 45.0% | |
| CTGGACTCATCGTTGTTGAT+TGG | + | chr4.1:19401774-19401793 | None:intergenic | 45.0% | |
| GATACTAGGGATCCAAAGTG+TGG | - | chr4.1:19404326-19404345 | MS.gene051337:intron | 45.0% | |
| GCATAGAATGATAGGGGACT+AGG | - | chr4.1:19404858-19404877 | MS.gene051337:intron | 45.0% | |
| GCTGCAATGTTCTGTCATTC+TGG | - | chr4.1:19404400-19404419 | MS.gene051337:intron | 45.0% | |
| GGAACTCTGTCTGAACCATT+TGG | + | chr4.1:19405822-19405841 | None:intergenic | 45.0% | |
| GGTTTCCTTCCACCAATTCA+AGG | - | chr4.1:19404055-19404074 | MS.gene051337:intron | 45.0% | |
| GTAACAGAATGTCAGAGACC+TGG | + | chr4.1:19405083-19405102 | None:intergenic | 45.0% | |
| GTTACACGCTTATGGACATC+TGG | + | chr4.1:19403164-19403183 | None:intergenic | 45.0% | |
| TACATGGAATCACTACCAGC+AGG | + | chr4.1:19403454-19403473 | None:intergenic | 45.0% | |
| TAGGTGTTTGGACGCAGATA+AGG | + | chr4.1:19403028-19403047 | None:intergenic | 45.0% | |
| TATACAGTAGGAGGGATAGG+AGG | - | chr4.1:19404898-19404917 | MS.gene051337:intron | 45.0% | |
| TCAGCTACTTCAGTGGTTTC+AGG | + | chr4.1:19405669-19405688 | None:intergenic | 45.0% | |
| TCAGGAACAATGCGACTATC+CGG | + | chr4.1:19405537-19405556 | None:intergenic | 45.0% | |
| TCATCCACGTTACACGCTTA+TGG | + | chr4.1:19403172-19403191 | None:intergenic | 45.0% | |
| TCCAGATTCAGCTACTTCAG+CGG | + | chr4.1:19405562-19405581 | None:intergenic | 45.0% | |
| TCTCCAGTTCAAATCCAGGA+TGG | + | chr4.1:19403233-19403252 | None:intergenic | 45.0% | |
| TGACGTCACGACTCCAATAA+GGG | - | chr4.1:19402762-19402781 | MS.gene051337:intron | 45.0% | |
| TGAGGTGAGCAAAAATGCTG+CGG | - | chr4.1:19403302-19403321 | MS.gene051337:intron | 45.0% | |
| TGGTATGATCGGCCTGATAT+TGG | - | chr4.1:19403651-19403670 | MS.gene051337:intron | 45.0% | |
| TGTCATTGCTGGACACGTAA+TGG | - | chr4.1:19404290-19404309 | MS.gene051337:intron | 45.0% | |
| TGTCTCCTTGAATTGGTGGA+AGG | + | chr4.1:19404063-19404082 | None:intergenic | 45.0% | |
| TTCAGACAGAGTTCCCTCTA+GGG | - | chr4.1:19405827-19405846 | MS.gene051337:CDS | 45.0% | |
| TTCCGTGGGCAAACTGTAAA+AGG | + | chr4.1:19405302-19405321 | None:intergenic | 45.0% | |
| TTGGTGGAAGGAAACCTACA+AGG | + | chr4.1:19404051-19404070 | None:intergenic | 45.0% | |
| ! | AGATTGAGGCGAAGTTGGTT+GGG | + | chr4.1:19405727-19405746 | None:intergenic | 45.0% |
| ! | AGCTGATTCAGCTACTTCAG+TGG | + | chr4.1:19405676-19405695 | None:intergenic | 45.0% |
| ! | CCAATAAGGGTGTATGTGTC+TGG | - | chr4.1:19402775-19402794 | MS.gene051337:intron | 45.0% |
| ! | CGAGTCTTTGTTGTCATTGC+TGG | - | chr4.1:19404279-19404298 | MS.gene051337:intron | 45.0% |
| ! | CTTGCAAGTCTTGTGACTAC+AGG | + | chr4.1:19405702-19405721 | None:intergenic | 45.0% |
| ! | GCTCTCCCAAACAGTTTTAC+AGG | + | chr4.1:19404504-19404523 | None:intergenic | 45.0% |
| ! | TGATGGTGTTGGGATTGACA+GGG | + | chr4.1:19405758-19405777 | None:intergenic | 45.0% |
| ! | TTCGCCATTGATGATCGAGT+TGG | - | chr4.1:19401723-19401742 | MS.gene051337:CDS | 45.0% |
| !! | AAAAATAAGATATTAATATA+TGG | - | chr4.1:19403783-19403802 | MS.gene051337:intron | 5.0% |
| !! | AAAATAAGATATTAATATAT+GGG | - | chr4.1:19403784-19403803 | MS.gene051337:intron | 5.0% |
| AGAAGGAGGTTTGCAGAGCA+TGG | - | chr4.1:19402238-19402257 | MS.gene051337:CDS | 50.0% | |
| AGCCTCAATGCCATCATCCA+GGG | + | chr4.1:19405793-19405812 | None:intergenic | 50.0% | |
| AGGACTGTGCTTGTATGACC+CGG | - | chr4.1:19405515-19405534 | MS.gene051337:CDS | 50.0% | |
| ATGAGTGCGATGAGGTTCAG+GGG | + | chr4.1:19405622-19405641 | None:intergenic | 50.0% | |
| ATGTATCAGACGCCGGTGAA+GGG | - | chr4.1:19402069-19402088 | MS.gene051337:CDS | 50.0% | |
| ATTCAGGTGAGGCCAATGTC+AGG | - | chr4.1:19402120-19402139 | MS.gene051337:intron | 50.0% | |
| ATTGAGGCTGTCCTCCCAAA+TGG | - | chr4.1:19405804-19405823 | MS.gene051337:CDS | 50.0% | |
| ATTGTGTAGGCACAGATGGG+CGG | - | chr4.1:19405477-19405496 | MS.gene051337:CDS | 50.0% | |
| CAGGAACAATGCGACTATCC+GGG | + | chr4.1:19405536-19405555 | None:intergenic | 50.0% | |
| CATGAGTGCGATGAGGTTCA+GGG | + | chr4.1:19405623-19405642 | None:intergenic | 50.0% | |
| CGATGAGATTGAGGCGAAGT+TGG | + | chr4.1:19405732-19405751 | None:intergenic | 50.0% | |
| CTCCCAATTGGATAGACCGT+AGG | + | chr4.1:19403282-19403301 | None:intergenic | 50.0% | |
| CTCTGTCTGAACCATTTGGG+AGG | + | chr4.1:19405818-19405837 | None:intergenic | 50.0% | |
| CTGTCCTTTCCTCCTGACAT+TGG | + | chr4.1:19402135-19402154 | None:intergenic | 50.0% | |
| GAAGGAGGTTTGCAGAGCAT+GGG | - | chr4.1:19402239-19402258 | MS.gene051337:CDS | 50.0% | |
| GATGAAGCTCTTCTCTTCCG+TGG | + | chr4.1:19405317-19405336 | None:intergenic | 50.0% | |
| GCATCAACTTCCTCCCTAGA+GGG | + | chr4.1:19405843-19405862 | None:intergenic | 50.0% | |
| GGACCATCCTGGATTTGAAC+TGG | - | chr4.1:19403227-19403246 | MS.gene051337:intron | 50.0% | |
| GGATCCCTAGTATCATGGTC+TGG | + | chr4.1:19404320-19404339 | None:intergenic | 50.0% | |
| GGGGACTAGGATCTCCTATT+AGG | - | chr4.1:19404871-19404890 | MS.gene051337:intron | 50.0% | |
| GGTCTATCCAATTGGGAGTG+AGG | - | chr4.1:19403284-19403303 | MS.gene051337:intron | 50.0% | |
| GTGACGTCACGACTCCAATA+AGG | - | chr4.1:19402761-19402780 | MS.gene051337:intron | 50.0% | |
| GTTCAGACAGAGTTCCCTCT+AGG | - | chr4.1:19405826-19405845 | MS.gene051337:CDS | 50.0% | |
| TCCGCTGAAGTAGCTGAATC+TGG | - | chr4.1:19405558-19405577 | MS.gene051337:CDS | 50.0% | |
| TGCATCAACTTCCTCCCTAG+AGG | + | chr4.1:19405844-19405863 | None:intergenic | 50.0% | |
| TGCTATGAACGACTGCAACC+CGG | - | chr4.1:19403605-19403624 | MS.gene051337:intron | 50.0% | |
| TTGCAAGCAAGCGTCCTTGT+AGG | - | chr4.1:19404034-19404053 | MS.gene051337:intron | 50.0% | |
| TTGCTCACCTCACTCCCAAT+TGG | + | chr4.1:19403294-19403313 | None:intergenic | 50.0% | |
| ! | ACAGGGGTACGATGAGATTG+AGG | + | chr4.1:19405741-19405760 | None:intergenic | 50.0% |
| ! | AGTTATGGCGGGAACAAACC+TGG | + | chr4.1:19402299-19402318 | None:intergenic | 50.0% |
| ! | CCTGGCATTTGGAGTCATAG+CGG | + | chr4.1:19402281-19402300 | None:intergenic | 50.0% |
| ! | CTGATGGTGTTGGGATTGAC+AGG | + | chr4.1:19405759-19405778 | None:intergenic | 50.0% |
| ! | GAGATTGAGGCGAAGTTGGT+TGG | + | chr4.1:19405728-19405747 | None:intergenic | 50.0% |
| ! | GATGGTGTTGGGATTGACAG+GGG | + | chr4.1:19405757-19405776 | None:intergenic | 50.0% |
| ! | TAAGGGTGTATGTGTCTGGC+AGG | - | chr4.1:19402779-19402798 | MS.gene051337:intron | 50.0% |
| ! | TCAGCTACTTCAGCGGATTC+AGG | + | chr4.1:19405555-19405574 | None:intergenic | 50.0% |
| !! | ACAAGGGTTTGGTTCTCTGC+AGG | - | chr4.1:19404091-19404110 | MS.gene051337:intron | 50.0% |
| !! | GGCGGATTTTCTATGAGAGC+AGG | - | chr4.1:19405495-19405514 | MS.gene051337:CDS | 50.0% |
| ACTTCCTCACCACCCTTCAC+CGG | + | chr4.1:19402084-19402103 | None:intergenic | 55.0% | |
| AGTGTTTGCGGCACTTTGCG+AGG | - | chr4.1:19405911-19405930 | MS.gene051337:CDS | 55.0% | |
| ATACCTGACTGCCGCAAGAG+CGG | + | chr4.1:19403384-19403403 | None:intergenic | 55.0% | |
| ATCCCAACACCATCAGCGAC+TGG | - | chr4.1:19405763-19405782 | MS.gene051337:CDS | 55.0% | |
| CACTTTGCGAGGGGCAGTAA+CGG | - | chr4.1:19405922-19405941 | MS.gene051337:CDS | 55.0% | |
| CAGCCTCAATGCCATCATCC+AGG | + | chr4.1:19405794-19405813 | None:intergenic | 55.0% | |
| CCGCTATGACTCCAAATGCC+AGG | - | chr4.1:19402278-19402297 | MS.gene051337:intron | 55.0% | |
| CCTGAACTGTTGCCGGAGTA+CGG | + | chr4.1:19401955-19401974 | None:intergenic | 55.0% | |
| CGTACTCCGGCAACAGTTCA+GGG | - | chr4.1:19401953-19401972 | MS.gene051337:CDS | 55.0% | |
| GAGGCCAATGTCAGGAGGAA+AGG | - | chr4.1:19402128-19402147 | MS.gene051337:intron | 55.0% | |
| GATGTATCAGACGCCGGTGA+AGG | - | chr4.1:19402068-19402087 | MS.gene051337:CDS | 55.0% | |
| GCAAAAACGCCACCGTACTC+CGG | - | chr4.1:19401940-19401959 | MS.gene051337:CDS | 55.0% | |
| GCATGAGTGCGATGAGGTTC+AGG | + | chr4.1:19405624-19405643 | None:intergenic | 55.0% | |
| GCCGAGAACTTCGACGTTAC+CGG | - | chr4.1:19401811-19401830 | MS.gene051337:CDS | 55.0% | |
| GCCGGTAACGTCGAAGTTCT+CGG | + | chr4.1:19401815-19401834 | None:intergenic | 55.0% | |
| GCCTCAATGCCATCATCCAG+GGG | + | chr4.1:19405792-19405811 | None:intergenic | 55.0% | |
| GCGGGAACAAACCTGGCATT+TGG | + | chr4.1:19402292-19402311 | None:intergenic | 55.0% | |
| GGTAACGTCGAAGTTCTCGG+CGG | + | chr4.1:19401812-19401831 | None:intergenic | 55.0% | |
| GTACTCCGGCAACAGTTCAG+GGG | - | chr4.1:19401954-19401973 | MS.gene051337:CDS | 55.0% | |
| GTGTTTGCGGCACTTTGCGA+GGG | - | chr4.1:19405912-19405931 | MS.gene051337:CDS | 55.0% | |
| TACTCCGGCAACAGTTCAGG+GGG | - | chr4.1:19401955-19401974 | MS.gene051337:CDS | 55.0% | |
| TGCAGAGCATGGGAGGAATC+TGG | - | chr4.1:19402249-19402268 | MS.gene051337:CDS | 55.0% | |
| TGTTTGCGGCACTTTGCGAG+GGG | - | chr4.1:19405913-19405932 | MS.gene051337:CDS | 55.0% | |
| ! | ACCCCTGGATGATGGCATTG+AGG | - | chr4.1:19405788-19405807 | MS.gene051337:CDS | 55.0% |
| ! | AGACAGAGTTCCCTCTAGGG+AGG | - | chr4.1:19405830-19405849 | MS.gene051337:CDS | 55.0% |
| ! | GACCAGTCGCTGATGGTGTT+GGG | + | chr4.1:19405768-19405787 | None:intergenic | 55.0% |
| ! | TGACCAGTCGCTGATGGTGT+TGG | + | chr4.1:19405769-19405788 | None:intergenic | 55.0% |
| !! | TCGCAAAGTGCCGCAAACAC+TGG | + | chr4.1:19405912-19405931 | None:intergenic | 55.0% |
| ACCGGCGTCTGATACATCCG+CGG | + | chr4.1:19402066-19402085 | None:intergenic | 60.0% | |
| ACTCCCCCCTGAACTGTTGC+CGG | + | chr4.1:19401962-19401981 | None:intergenic | 60.0% | |
| ACTCCGGCAACAGTTCAGGG+GGG | - | chr4.1:19401956-19401975 | MS.gene051337:CDS | 60.0% | |
| AGGTTCAGGGGAAGCTGGCT+GGG | + | chr4.1:19405610-19405629 | None:intergenic | 60.0% | |
| AGGTTCCCTCACCGCTCTTG+CGG | - | chr4.1:19403370-19403389 | MS.gene051337:intron | 60.0% | |
| CAGGTGAGGCCAATGTCAGG+AGG | - | chr4.1:19402123-19402142 | MS.gene051337:intron | 60.0% | |
| CCGTACTCCGGCAACAGTTC+AGG | - | chr4.1:19401952-19401971 | MS.gene051337:CDS | 60.0% | |
| CGATGAGGTTCAGGGGAAGC+TGG | + | chr4.1:19405615-19405634 | None:intergenic | 60.0% | |
| GAACTGTTGCCGGAGTACGG+TGG | + | chr4.1:19401952-19401971 | None:intergenic | 60.0% | |
| GCGGCGTAGGGTTGAAAACC+TGG | + | chr4.1:19401793-19401812 | None:intergenic | 60.0% | |
| GGAGGTTTGCAGAGCATGGG+AGG | - | chr4.1:19402242-19402261 | MS.gene051337:CDS | 60.0% | |
| TATCAGACGCCGGTGAAGGG+TGG | - | chr4.1:19402072-19402091 | MS.gene051337:CDS | 60.0% | |
| TCGAAGTTCTCGGCGGCGTA+GGG | + | chr4.1:19401805-19401824 | None:intergenic | 60.0% | |
| ! | GACTGGTCACCCCTGGATGA+TGG | - | chr4.1:19405780-19405799 | MS.gene051337:CDS | 60.0% |
| CAGGGGTGACCAGTCGCTGA+TGG | + | chr4.1:19405775-19405794 | None:intergenic | 65.0% | |
| GACTGCCGCAAGAGCGGTGA+GGG | + | chr4.1:19403378-19403397 | None:intergenic | 65.0% | |
| GAGGTTCAGGGGAAGCTGGC+TGG | + | chr4.1:19405611-19405630 | None:intergenic | 65.0% | |
| GCCGCGGATGTATCAGACGC+CGG | - | chr4.1:19402062-19402081 | MS.gene051337:CDS | 65.0% | |
| GTCGAAGTTCTCGGCGGCGT+AGG | + | chr4.1:19401806-19401825 | None:intergenic | 65.0% | |
| TCACCGCTCTTGCGGCAGTC+AGG | - | chr4.1:19403378-19403397 | MS.gene051337:intron | 65.0% | |
| TGACTGCCGCAAGAGCGGTG+AGG | + | chr4.1:19403379-19403398 | None:intergenic | 65.0% | |
| ! | CATCAGCGACTGGTCACCCC+TGG | - | chr4.1:19405773-19405792 | MS.gene051337:CDS | 65.0% |
| GACGCCGGTGAAGGGTGGTG+AGG | - | chr4.1:19402077-19402096 | MS.gene051337:CDS | 70.0% | |
| GGAAGCAGCTCTCGTCGCCG+CGG | - | chr4.1:19402046-19402065 | MS.gene051337:CDS | 70.0% | |
| AGCGAGCTGCGACGGCGAGC+CGG | + | chr4.1:19401833-19401852 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 19401649 | 19405941 | 19401649 | ID=MS.gene051337 |
| chr4.1 | mRNA | 19401649 | 19405941 | 19401649 | ID=MS.gene051337.t1;Parent=MS.gene051337 |
| chr4.1 | exon | 19405291 | 19405941 | 19405291 | ID=MS.gene051337.t1.exon1;Parent=MS.gene051337.t1 |
| chr4.1 | CDS | 19405291 | 19405941 | 19405291 | ID=cds.MS.gene051337.t1;Parent=MS.gene051337.t1 |
| chr4.1 | exon | 19402222 | 19402281 | 19402222 | ID=MS.gene051337.t1.exon2;Parent=MS.gene051337.t1 |
| chr4.1 | CDS | 19402222 | 19402281 | 19402222 | ID=cds.MS.gene051337.t1;Parent=MS.gene051337.t1 |
| chr4.1 | exon | 19401649 | 19402104 | 19401649 | ID=MS.gene051337.t1.exon3;Parent=MS.gene051337.t1 |
| chr4.1 | CDS | 19401649 | 19402104 | 19401649 | ID=cds.MS.gene051337.t1;Parent=MS.gene051337.t1 |
| Gene Sequence |
| Protein sequence |
