AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05147

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05147.t1 MTR_6g477900 99.163 239 2 0 1 239 1 239 0.0 499
MS.gene05147.t1 MTR_3g064580 75.309 162 39 1 1 161 1 162 1.45e-89 278
MS.gene05147.t1 MTR_5g076850 74.375 160 41 0 1 160 1 160 1.27e-85 267
MS.gene05147.t1 MTR_2g064090 71.519 158 44 1 1 157 1 158 3.73e-83 252
MS.gene05147.t1 MTR_5g014300 63.068 176 55 2 1 169 1 173 6.73e-75 230
MS.gene05147.t1 MTR_4g098630 63.750 160 55 1 1 157 1 160 6.61e-70 217
MS.gene05147.t1 MTR_3g096140 47.805 205 98 2 8 205 9 211 2.76e-62 196
MS.gene05147.t1 MTR_3g096140 47.805 205 98 2 8 205 9 211 4.59e-61 196
MS.gene05147.t1 MTR_1g097300 59.006 161 66 0 8 168 21 181 7.01e-61 201
MS.gene05147.t1 MTR_3g093040 46.544 217 108 2 1 217 103 311 1.32e-60 193
MS.gene05147.t1 MTR_3g093050 47.748 222 107 2 1 218 17 233 1.49e-60 200
MS.gene05147.t1 MTR_3g093050 47.748 222 107 2 1 218 17 233 3.24e-60 200
MS.gene05147.t1 MTR_4g035590 57.051 156 63 2 5 159 7 159 5.74e-60 192
MS.gene05147.t1 MTR_5g041940 50.000 188 87 3 6 189 3 187 1.06e-59 189
MS.gene05147.t1 MTR_4g036030 52.381 168 75 3 6 170 7 172 1.38e-59 191
MS.gene05147.t1 MTR_1g096430 57.237 152 62 2 6 156 7 156 7.07e-59 189
MS.gene05147.t1 MTR_5g069030 46.352 233 111 3 6 238 25 243 1.21e-58 196
MS.gene05147.t1 MTR_4g101680 53.289 152 68 2 6 156 7 156 2.03e-58 189
MS.gene05147.t1 MTR_8g076110 48.045 179 90 2 6 183 6 182 2.23e-58 187
MS.gene05147.t1 MTR_2g062730 57.051 156 61 4 4 156 8 160 2.94e-58 188
MS.gene05147.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 4.03e-58 187
MS.gene05147.t1 MTR_5g021710 55.263 152 65 2 6 156 8 157 8.05e-58 187
MS.gene05147.t1 MTR_4g081870 45.729 199 98 5 6 200 9 201 1.19e-57 184
MS.gene05147.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 1.46e-57 189
MS.gene05147.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 1.56e-57 189
MS.gene05147.t1 MTR_3g096920 54.487 156 65 3 6 158 7 159 1.22e-56 182
MS.gene05147.t1 MTR_5g012080 54.902 153 66 3 6 156 7 158 1.60e-56 184
MS.gene05147.t1 MTR_1g090720 58.025 162 62 1 4 159 40 201 1.93e-56 187
MS.gene05147.t1 MTR_8g024480 47.126 174 82 2 6 169 15 188 2.24e-56 186
MS.gene05147.t1 MTR_2g079990 51.592 157 74 1 1 157 11 165 2.40e-56 183
MS.gene05147.t1 MTR_6g084430 47.739 199 94 5 6 200 5 197 5.07e-56 182
MS.gene05147.t1 MTR_8g059170 52.830 159 71 2 1 157 9 165 9.98e-56 181
MS.gene05147.t1 MTR_1g090723 57.237 152 63 2 8 158 10 160 1.38e-55 187
MS.gene05147.t1 MTR_1g090723 54.938 162 71 2 8 168 10 170 2.07e-55 187
MS.gene05147.t1 MTR_7g085220 44.271 192 81 4 4 182 6 184 2.98e-55 180
MS.gene05147.t1 MTR_8g093580 52.941 153 72 0 6 158 6 158 6.86e-55 183
MS.gene05147.t1 MTR_2g078700 56.051 157 63 3 6 158 23 177 1.62e-54 179
MS.gene05147.t1 MTR_0036s0150 57.237 152 63 2 8 158 7 157 1.67e-54 183
MS.gene05147.t1 MTR_2g080010 48.889 180 77 3 6 172 15 192 4.03e-54 177
MS.gene05147.t1 MTR_3g088110 46.939 196 90 5 2 194 3 187 4.07e-54 176
MS.gene05147.t1 MTR_2g093810 49.405 168 77 3 6 167 14 179 4.88e-54 176
MS.gene05147.t1 MTR_8g094580 53.503 157 66 4 6 158 7 160 5.29e-54 175
MS.gene05147.t1 MTR_1g008740 55.769 156 63 4 6 158 13 165 5.73e-54 177
MS.gene05147.t1 MTR_1g090723 53.086 162 75 1 8 168 10 171 5.89e-54 183
MS.gene05147.t1 MTR_1g008740 55.769 156 63 4 6 158 27 179 7.23e-54 177
MS.gene05147.t1 MTR_3g109340 55.484 155 64 3 6 158 22 173 7.69e-54 177
MS.gene05147.t1 MTR_6g012670 52.147 163 74 2 6 166 20 180 2.62e-53 174
MS.gene05147.t1 MTR_4g108760 53.595 153 67 2 6 156 17 167 3.21e-53 176
MS.gene05147.t1 MTR_3g096920 54.054 148 63 3 6 153 7 149 5.51e-53 174
MS.gene05147.t1 MTR_3g109340 54.194 155 65 3 6 158 22 172 1.28e-52 174
MS.gene05147.t1 MTR_6g032770 49.689 161 75 3 3 159 15 173 1.94e-52 174
MS.gene05147.t1 MTR_1g069805 41.395 215 116 4 4 214 8 216 2.30e-52 171
MS.gene05147.t1 MTR_3g435150 53.896 154 67 2 6 157 16 167 6.31e-52 171
MS.gene05147.t1 MTR_7g100990 49.080 163 75 3 2 158 7 167 7.39e-52 171
MS.gene05147.t1 MTR_2157s0010 48.795 166 69 4 6 158 8 170 1.33e-51 169
MS.gene05147.t1 MTR_2g079990 44.624 186 71 3 1 157 11 193 1.35e-51 172
MS.gene05147.t1 MTR_3g096140 45.026 191 96 2 22 205 2 190 2.03e-51 170
MS.gene05147.t1 MTR_6g011860 48.235 170 76 3 6 165 15 182 2.19e-51 171
MS.gene05147.t1 MTR_4g134460 52.288 153 68 3 8 159 56 204 2.53e-51 172
MS.gene05147.t1 MTR_7g085260 47.222 180 84 4 4 177 15 189 2.65e-51 171
MS.gene05147.t1 MTR_3g116070 45.238 210 86 7 5 206 22 210 3.91e-51 170
MS.gene05147.t1 MTR_7g097090 52.941 153 64 3 4 154 8 154 5.62e-51 167
MS.gene05147.t1 MTR_4g089135 47.159 176 66 3 6 156 15 188 1.06e-50 169
MS.gene05147.t1 MTR_3g070030 52.564 156 69 2 4 156 17 170 2.43e-50 168
MS.gene05147.t1 MTR_7g005280 53.548 155 63 3 4 156 13 160 2.82e-50 165
MS.gene05147.t1 MTR_2g064470 47.953 171 84 3 1 170 6 172 2.50e-49 164
MS.gene05147.t1 MTR_8g467490 42.105 190 96 4 8 185 16 203 4.06e-49 166
MS.gene05147.t1 MTR_5g040420 48.428 159 70 3 8 156 16 172 4.90e-49 166
MS.gene05147.t1 MTR_2g086880 50.318 157 69 3 1 157 13 160 6.55e-49 168
MS.gene05147.t1 MTR_2g086880 52.667 150 62 3 8 157 20 160 1.31e-48 168
MS.gene05147.t1 MTR_7g011130 56.489 131 55 1 4 134 17 145 1.12e-46 158
MS.gene05147.t1 MTR_2g068880 46.061 165 73 3 8 157 24 187 3.31e-46 156
MS.gene05147.t1 MTR_4g075980 44.242 165 82 3 8 169 17 174 2.70e-44 150
MS.gene05147.t1 MTR_2g068920 44.848 165 75 3 8 157 23 186 5.43e-44 150
MS.gene05147.t1 MTR_7g011120 54.962 131 57 1 4 134 6 134 7.80e-44 150
MS.gene05147.t1 MTR_8g023840 51.656 151 64 5 6 153 11 155 1.21e-43 151
MS.gene05147.t1 MTR_5g090970 45.963 161 73 4 8 156 20 178 2.85e-43 148
MS.gene05147.t1 MTR_5g090970 45.342 161 73 4 8 156 20 177 2.56e-42 146
MS.gene05147.t1 MTR_8g023860 50.331 151 66 5 6 153 12 156 4.66e-42 148
MS.gene05147.t1 MTR_3g070040 49.007 151 68 3 10 156 12 157 1.12e-41 145
MS.gene05147.t1 MTR_8g023900 46.429 168 83 5 6 170 12 175 5.46e-40 143
MS.gene05147.t1 MTR_8g023900 37.037 243 126 9 1 225 184 417 4.61e-38 138
MS.gene05147.t1 MTR_8g099750 44.785 163 77 4 6 159 14 172 1.90e-38 134
MS.gene05147.t1 MTR_8g023930 38.496 226 117 8 6 218 24 240 1.01e-37 137
MS.gene05147.t1 MTR_2g086690 37.037 216 118 7 7 209 5 215 1.35e-37 132
MS.gene05147.t1 MTR_4g052620 41.875 160 86 4 6 158 5 164 5.38e-36 128
MS.gene05147.t1 MTR_7g105170 41.718 163 85 6 5 157 3 165 7.79e-35 125
MS.gene05147.t1 MTR_3g098810 42.236 161 79 3 6 156 14 170 1.92e-34 124
MS.gene05147.t1 MTR_3g098810 46.212 132 63 2 6 133 14 141 3.61e-33 118
MS.gene05147.t1 MTR_8g094580 53.000 100 42 3 63 158 8 106 6.30e-32 117
MS.gene05147.t1 MTR_4g094302 42.308 130 63 3 6 133 11 130 2.88e-29 108
MS.gene05147.t1 MTR_4g094302 36.875 160 83 4 6 157 11 160 3.75e-29 108
MS.gene05147.t1 MTR_8g023880 34.545 220 111 8 2 204 3 206 7.06e-28 107
MS.gene05147.t1 MTR_7g070140 49.383 81 39 2 56 134 12 92 3.31e-22 89.0
MS.gene05147.t1 MTR_8g093790 38.065 155 74 6 2 156 6 138 5.44e-22 89.7
MS.gene05147.t1 MTR_7g083330 34.437 151 93 4 6 155 18 163 2.25e-21 88.6
MS.gene05147.t1 MTR_3g096400 34.848 132 76 4 4 133 5 128 4.47e-18 80.1
MS.gene05147.t1 MTR_7g083360 34.884 129 80 3 4 131 8 133 1.83e-17 77.0
MS.gene05147.t1 MTR_7g083370 33.088 136 83 4 6 138 10 140 1.99e-17 76.6
MS.gene05147.t1 MTR_7g070150 51.923 52 22 1 105 156 9 57 1.02e-13 65.5
MS.gene05147.t1 MTR_7g116460 33.117 154 89 9 12 157 11 158 7.23e-12 63.2
MS.gene05147.t1 MTR_1g087190 57.778 45 18 1 8 51 7 51 4.77e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05147.t1 AT3G17730 75.934 241 44 5 1 228 1 240 2.17e-130 368
MS.gene05147.t1 AT1G65910 56.667 240 85 3 1 221 1 240 1.88e-92 284
MS.gene05147.t1 AT5G17260 59.244 238 69 6 1 217 1 231 4.96e-91 276
MS.gene05147.t1 AT3G03200 77.707 157 34 1 1 156 1 157 1.97e-88 270
MS.gene05147.t1 AT1G54330 72.611 157 40 1 1 157 1 154 2.53e-79 241
MS.gene05147.t1 AT5G46590 64.103 156 54 2 6 159 6 161 6.91e-71 219
MS.gene05147.t1 AT4G17980 62.733 161 56 2 1 157 1 161 9.32e-70 215
MS.gene05147.t1 AT4G17980 62.733 161 56 2 1 157 1 161 1.88e-69 215
MS.gene05147.t1 AT5G46590 67.391 138 40 2 6 142 6 139 2.14e-66 207
MS.gene05147.t1 AT3G10480 61.635 159 61 0 1 159 22 180 2.31e-66 212
MS.gene05147.t1 AT3G10490 63.226 155 56 1 6 159 27 181 5.82e-66 204
MS.gene05147.t1 AT3G10480 61.875 160 60 1 1 159 22 181 1.25e-65 210
MS.gene05147.t1 AT1G32510 55.080 187 70 3 6 184 6 186 2.98e-65 204
MS.gene05147.t1 AT3G10490 62.420 157 58 1 4 159 25 181 3.49e-64 206
MS.gene05147.t1 AT3G10500 58.929 168 67 2 2 168 5 171 9.60e-63 205
MS.gene05147.t1 AT5G04410 57.485 167 71 0 2 168 5 171 1.03e-62 205
MS.gene05147.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.62e-62 202
MS.gene05147.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.76e-62 202
MS.gene05147.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.86e-62 202
MS.gene05147.t1 AT1G33060 58.333 156 65 0 1 156 19 174 1.94e-61 204
MS.gene05147.t1 AT1G33060 58.333 156 65 0 1 156 19 174 2.02e-61 204
MS.gene05147.t1 AT1G69490 47.644 191 94 3 6 192 9 197 3.17e-61 193
MS.gene05147.t1 AT4G10350 49.727 183 91 1 5 186 8 190 1.33e-60 194
MS.gene05147.t1 AT3G10480 52.332 193 58 2 1 159 22 214 1.37e-60 199
MS.gene05147.t1 AT5G64060 53.571 168 78 0 1 168 1 168 3.71e-59 191
MS.gene05147.t1 AT1G12260 53.947 152 67 2 6 156 7 156 9.74e-59 189
MS.gene05147.t1 AT1G71930 48.500 200 94 5 5 200 8 202 1.06e-58 189
MS.gene05147.t1 AT1G71930 48.500 200 94 5 5 200 8 202 1.06e-58 189
MS.gene05147.t1 AT1G62700 55.263 152 65 2 6 156 7 156 1.93e-58 190
MS.gene05147.t1 AT1G62700 55.263 152 65 2 6 156 7 156 1.93e-58 190
MS.gene05147.t1 AT1G12260 53.947 152 67 2 6 156 7 156 2.28e-58 190
MS.gene05147.t1 AT1G33280 54.487 156 67 2 5 159 7 159 3.35e-58 187
MS.gene05147.t1 AT5G09330 57.595 158 67 0 1 158 1 158 3.43e-58 192
MS.gene05147.t1 AT5G09330 57.595 158 67 0 1 158 1 158 3.43e-58 192
MS.gene05147.t1 AT5G09330 57.595 158 67 0 1 158 1 158 3.43e-58 192
MS.gene05147.t1 AT5G09330 57.595 158 67 0 1 158 1 158 3.43e-58 192
MS.gene05147.t1 AT5G09330 57.595 158 67 0 1 158 1 158 3.43e-58 192
MS.gene05147.t1 AT2G24430 59.740 154 57 3 5 156 15 165 5.23e-58 186
MS.gene05147.t1 AT2G24430 59.740 154 57 3 5 156 15 165 5.23e-58 186
MS.gene05147.t1 AT2G18060 54.430 158 67 3 1 156 4 158 7.42e-58 187
MS.gene05147.t1 AT2G18060 54.430 158 67 3 1 156 4 158 7.42e-58 187
MS.gene05147.t1 AT3G61910 43.939 198 97 2 6 189 11 208 1.66e-57 186
MS.gene05147.t1 AT4G36160 55.556 153 63 3 6 156 10 159 1.91e-57 187
MS.gene05147.t1 AT4G36160 55.556 153 63 3 6 156 10 159 1.91e-57 187
MS.gene05147.t1 AT4G36160 55.556 153 63 3 6 156 14 163 2.14e-57 187
MS.gene05147.t1 AT5G24590 47.895 190 97 2 1 188 8 197 2.46e-57 189
MS.gene05147.t1 AT1G34190 55.280 161 72 0 8 168 18 178 5.43e-57 190
MS.gene05147.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.30e-57 185
MS.gene05147.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.30e-57 185
MS.gene05147.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.30e-57 185
MS.gene05147.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.30e-57 185
MS.gene05147.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.30e-57 185
MS.gene05147.t1 AT5G66300 56.494 154 63 3 5 156 11 162 7.00e-57 183
MS.gene05147.t1 AT1G76420 52.907 172 76 3 5 174 21 189 7.50e-57 184
MS.gene05147.t1 AT2G46770 44.843 223 98 7 6 207 16 234 1.02e-56 185
MS.gene05147.t1 AT5G39610 54.777 157 67 2 4 158 18 172 2.53e-56 181
MS.gene05147.t1 AT1G34180 54.037 161 74 0 8 168 18 178 2.73e-56 186
MS.gene05147.t1 AT1G61110 51.515 165 65 3 6 157 16 178 8.09e-56 181
MS.gene05147.t1 AT3G18400 54.605 152 66 2 5 156 4 152 8.68e-56 181
MS.gene05147.t1 AT5G07680 56.129 155 64 2 6 158 3 155 1.03e-55 181
MS.gene05147.t1 AT1G34180 54.037 161 74 0 8 168 18 178 1.22e-55 187
MS.gene05147.t1 AT5G07680 56.129 155 64 2 6 158 17 169 1.37e-55 181
MS.gene05147.t1 AT4G27410 49.359 156 77 1 1 156 9 162 5.09e-55 178
MS.gene05147.t1 AT3G15500 50.641 156 75 1 1 156 9 162 5.11e-55 179
MS.gene05147.t1 AT3G15170 55.000 160 66 3 6 161 20 177 5.91e-55 179
MS.gene05147.t1 AT3G04070 49.091 165 70 3 5 157 9 171 1.04e-54 179
MS.gene05147.t1 AT1G32770 50.617 162 69 2 6 156 16 177 1.45e-54 179
MS.gene05147.t1 AT5G61430 54.839 155 66 2 6 158 16 168 1.64e-54 178
MS.gene05147.t1 AT3G29035 54.902 153 65 2 4 154 22 172 4.72e-54 176
MS.gene05147.t1 AT1G52890 50.000 156 76 1 1 156 9 162 6.02e-54 176
MS.gene05147.t1 AT3G04070 46.667 180 66 4 5 156 9 186 1.06e-53 177
MS.gene05147.t1 AT3G12977 47.674 172 87 2 1 171 13 182 1.44e-53 174
MS.gene05147.t1 AT1G01720 52.866 157 67 3 6 158 7 160 1.62e-53 174
MS.gene05147.t1 AT5G62380 50.000 156 75 2 2 156 3 156 2.15e-53 176
MS.gene05147.t1 AT5G62380 50.000 156 75 2 2 156 3 156 2.15e-53 176
MS.gene05147.t1 AT3G49530 50.955 157 76 1 1 156 8 164 2.85e-53 177
MS.gene05147.t1 AT5G08790 51.235 162 71 3 2 158 3 161 4.03e-53 173
MS.gene05147.t1 AT1G34180 50.289 173 74 1 8 168 18 190 4.80e-53 177
MS.gene05147.t1 AT3G49530 50.955 157 76 1 1 156 8 164 5.57e-53 177
MS.gene05147.t1 AT1G34180 50.289 173 74 1 8 168 18 190 1.74e-52 178
MS.gene05147.t1 AT1G77450 39.167 240 132 6 6 237 10 243 2.78e-52 170
MS.gene05147.t1 AT5G18270 54.140 157 67 3 4 157 19 173 3.45e-52 172
MS.gene05147.t1 AT5G53950 53.125 160 69 3 6 161 17 174 6.06e-52 172
MS.gene05147.t1 AT5G18270 53.503 157 68 3 4 157 19 173 8.22e-52 171
MS.gene05147.t1 AT2G02450 50.980 153 70 3 8 159 53 201 1.48e-51 172
MS.gene05147.t1 AT4G27410 45.614 171 78 2 1 156 9 179 1.68e-51 170
MS.gene05147.t1 AT2G02450 50.980 153 70 3 8 159 53 201 1.96e-51 172
MS.gene05147.t1 AT5G63790 39.914 233 116 6 4 222 48 270 2.38e-51 169
MS.gene05147.t1 AT5G63790 39.914 233 116 6 4 222 58 280 2.57e-51 169
MS.gene05147.t1 AT1G32870 54.217 166 72 2 5 168 9 172 8.26e-51 173
MS.gene05147.t1 AT1G56010 47.458 177 81 5 1 170 14 185 1.05e-50 168
MS.gene05147.t1 AT1G32870 54.217 166 72 2 5 168 9 172 1.20e-50 173
MS.gene05147.t1 AT3G15510 47.953 171 74 3 10 167 21 189 1.30e-50 169
MS.gene05147.t1 AT1G32870 54.217 166 72 2 5 168 45 208 1.91e-50 173
MS.gene05147.t1 AT2G33480 50.993 151 69 1 6 156 15 160 5.47e-50 164
MS.gene05147.t1 AT3G04060 52.532 158 70 3 4 158 18 173 6.67e-50 166
MS.gene05147.t1 AT5G22290 50.685 146 65 2 8 153 23 161 1.42e-49 166
MS.gene05147.t1 AT1G26870 42.932 191 96 3 6 185 16 204 3.57e-49 166
MS.gene05147.t1 AT5G39820 41.818 220 96 6 8 203 22 233 3.98e-49 164
MS.gene05147.t1 AT2G33480 50.331 151 68 2 6 156 15 158 3.05e-48 160
MS.gene05147.t1 AT3G44290 51.370 146 63 3 8 153 16 153 1.14e-47 157
MS.gene05147.t1 AT2G27300 49.032 155 71 2 1 155 9 155 1.15e-47 160
MS.gene05147.t1 AT5G13180 51.634 153 66 3 6 156 14 160 4.52e-47 156
MS.gene05147.t1 AT3G44290 51.370 146 63 3 8 153 16 153 7.24e-47 158
MS.gene05147.t1 AT4G28530 50.000 170 59 6 6 156 10 172 1.47e-46 158
MS.gene05147.t1 AT2G17040 42.564 195 93 6 8 190 8 195 1.71e-46 155
MS.gene05147.t1 AT2G43000 48.667 150 74 2 8 156 20 167 3.34e-46 155
MS.gene05147.t1 AT1G52880 50.625 160 65 4 10 157 21 178 6.28e-46 155
MS.gene05147.t1 AT5G04395 50.000 142 57 2 6 133 28 169 3.72e-42 142
MS.gene05147.t1 AT3G12977 51.818 110 52 1 63 171 20 129 1.06e-36 129
MS.gene05147.t1 AT3G12910 43.373 166 74 6 8 156 23 185 2.43e-35 127
MS.gene05147.t1 AT5G61430 58.163 98 39 1 63 158 8 105 6.16e-35 125
MS.gene05147.t1 AT4G10350 45.968 124 67 0 63 186 20 143 9.58e-35 126
MS.gene05147.t1 AT1G56010 51.754 114 46 3 63 170 8 118 2.16e-33 121
MS.gene05147.t1 AT4G01550 41.146 192 97 8 9 194 7 188 4.85e-32 122
MS.gene05147.t1 AT5G22380 39.490 157 88 4 9 158 8 164 3.22e-31 115
MS.gene05147.t1 AT4G01520 43.939 132 69 3 7 133 5 136 7.80e-31 115
MS.gene05147.t1 AT3G44350 37.975 158 93 4 6 158 5 162 4.79e-30 112
MS.gene05147.t1 AT2G33480 51.042 96 47 0 61 156 8 103 6.46e-30 111
MS.gene05147.t1 AT4G01540 43.077 130 69 3 9 133 7 136 9.37e-29 112
MS.gene05147.t1 AT4G01540 33.690 187 103 6 9 190 7 177 1.29e-28 111
MS.gene05147.t1 AT4G01540 43.077 130 69 3 9 133 7 136 1.51e-28 112
MS.gene05147.t1 AT4G01540 43.077 130 69 3 9 133 7 136 1.68e-28 112
MS.gene05147.t1 AT4G28530 50.909 110 34 3 6 98 10 116 3.76e-28 109
MS.gene05147.t1 AT3G10490 62.500 80 29 1 81 159 2 81 3.70e-27 107
MS.gene05147.t1 AT3G10490 62.500 80 29 1 81 159 2 81 3.70e-27 107
MS.gene05147.t1 AT3G44350 41.985 131 72 3 6 132 5 135 5.87e-27 102
MS.gene05147.t1 AT3G04420 36.774 155 91 3 7 159 4 153 1.17e-26 104
MS.gene05147.t1 AT1G02230 40.789 152 78 7 7 153 4 148 1.24e-26 105
MS.gene05147.t1 AT3G04420 36.774 155 91 3 7 159 4 153 2.73e-26 104
MS.gene05147.t1 AT5G64530 33.702 181 88 6 4 168 1 165 4.45e-26 100
MS.gene05147.t1 AT5G64530 39.552 134 65 4 4 135 1 120 1.66e-25 98.2
MS.gene05147.t1 AT1G02250 36.601 153 83 5 7 153 4 148 1.89e-23 97.4
MS.gene05147.t1 AT1G01010 38.462 156 77 5 9 153 6 153 3.68e-23 97.4
MS.gene05147.t1 AT3G56530 31.373 153 100 3 4 154 50 199 2.24e-22 93.6
MS.gene05147.t1 AT1G02220 35.484 155 90 4 7 159 4 150 9.38e-22 93.2
MS.gene05147.t1 AT2G43000 46.591 88 46 1 70 156 2 89 1.29e-20 86.7
MS.gene05147.t1 AT3G55210 31.481 162 93 4 6 154 11 167 1.84e-20 87.8
MS.gene05147.t1 AT2G18060 51.389 72 31 2 86 156 2 70 7.74e-19 83.6
MS.gene05147.t1 AT5G22290 50.746 67 27 1 87 153 2 62 1.79e-16 76.3
MS.gene05147.t1 AT5G50820 33.333 132 74 4 6 133 17 138 2.37e-16 75.1
MS.gene05147.t1 AT5G14000 31.538 130 83 2 6 133 15 140 3.51e-15 70.9
MS.gene05147.t1 AT5G14000 29.032 155 101 3 6 158 15 162 5.79e-15 71.6
MS.gene05147.t1 AT3G04430 33.835 133 74 5 12 132 6 136 5.61e-14 68.6

Find 46 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACACTCATTATTGATTA+TGG 0.195935 6.4:+51285296 None:intergenic
GATGATGCTCCTAGTATTTC+TGG 0.199026 6.4:+51285264 None:intergenic
CTATTTGTTCTAAATCCATT+AGG 0.266100 6.4:+51288574 None:intergenic
TCATACCAATAGGTCTGTTT+TGG 0.299769 6.4:+51288497 None:intergenic
TATTTGTTCTAAATCCATTA+GGG 0.345822 6.4:+51288575 None:intergenic
GAGCAACAAGAGCAGGATAC+TGG 0.370822 6.4:-51288552 MS.gene05147:CDS
AAATGGAATCTGTTCTGATA+TGG 0.374346 6.4:-51285367 MS.gene05147:CDS
CTCAAGGAATTAGAACTGAT+TGG 0.379320 6.4:-51288441 MS.gene05147:CDS
TCATGCCAAAACAGACCTAT+TGG 0.385273 6.4:-51288502 MS.gene05147:CDS
TGAGGACAATACTGGATTAC+AGG 0.413847 6.4:-51288383 MS.gene05147:intron
AAGACATTGGTTTACTATAG+AGG 0.419530 6.4:-51288472 MS.gene05147:CDS
AGGAAGACAAAGATGATTCA+TGG 0.428096 6.4:-51285227 MS.gene05147:CDS
AAAGAGTGTGAGGACAATAC+TGG 0.433988 6.4:-51288391 MS.gene05147:CDS
TTGTCAATTATTATCTAAAG+AGG 0.436603 6.4:-51289490 MS.gene05147:CDS
CATTTGTAAAGATCAACTTC+AGG 0.441657 6.4:+51289431 None:intergenic
TCAAGGAATTAGAACTGATT+GGG 0.453361 6.4:-51288440 MS.gene05147:CDS
TCTTTACAAATGTGAACCTT+GGG 0.457920 6.4:-51289420 MS.gene05147:CDS
CGGGACCGAAAATACCCTAA+TGG 0.459128 6.4:-51288589 MS.gene05147:CDS
TTGACAAGTTCTTCATCAGT+TGG 0.460855 6.4:+51289506 None:intergenic
ATCTTTACAAATGTGAACCT+TGG 0.461628 6.4:-51289421 MS.gene05147:CDS
AATGTCTTCTTCATACCAAT+AGG 0.469539 6.4:+51288487 None:intergenic
ACAAATAGAGCAACAAGAGC+AGG 0.482385 6.4:-51288559 MS.gene05147:CDS
AAGAAAATTATGTCACCAGT+TGG 0.490536 6.4:-51289554 None:intergenic
TGTGAACCTTGGGAATTAGC+AGG 0.505500 6.4:-51289410 MS.gene05147:intron
TACCATTCTGGATCTCTACT+TGG 0.508648 6.4:+51288625 None:intergenic
ATTTCTTCACCACCAACCAT+TGG 0.521704 6.4:+51285162 None:intergenic
CCTCACACTCTTTATCATCA+AGG 0.523352 6.4:+51288401 None:intergenic
AAACCTGGTGGTAATCCAAC+TGG 0.525177 6.4:+51289539 None:intergenic
ATCATCTTCATGTTTAGAAG+AGG 0.530767 6.4:-51285247 MS.gene05147:CDS
TGCCAAGTAGAGATCCAGAA+TGG 0.535141 6.4:-51288627 MS.gene05147:CDS
TCTAATACACCAATGGTTGG+TGG 0.556914 6.4:-51285171 MS.gene05147:CDS
TATCTAAAGAGGAAAATCAA+TGG 0.563389 6.4:-51289479 MS.gene05147:CDS
GTATTCTTCTAATACACCAA+TGG 0.568650 6.4:-51285178 MS.gene05147:CDS
TATTGGTATGAAGAAGACAT+TGG 0.580527 6.4:-51288485 MS.gene05147:CDS
ATGATGTCTCCAGAAATACT+AGG 0.584004 6.4:-51285273 MS.gene05147:CDS
TCTTCTAATACACCAATGGT+TGG 0.588359 6.4:-51285174 MS.gene05147:CDS
GCAGGATACTGGAAATCTAC+CGG 0.591478 6.4:-51288541 MS.gene05147:CDS
ATATAACCTGCTAATTCCCA+AGG 0.594404 6.4:+51289404 None:intergenic
TCACCAGTTGGATTACCACC+AGG 0.611908 6.4:-51289542 MS.gene05147:CDS
CAATCAGTTCTAATTCCTTG+AGG 0.630679 6.4:+51288442 None:intergenic
TATAGAGGAAGAGCTCCTCA+AGG 0.649242 6.4:-51288457 MS.gene05147:CDS
CCTTGATGATAAAGAGTGTG+AGG 0.659570 6.4:-51288401 MS.gene05147:CDS
AATTCATTACAGAAGATGCA+TGG 0.663634 6.4:-51285200 MS.gene05147:CDS
GTTGGATGAAATCTGAAACC+TGG 0.673387 6.4:+51289524 None:intergenic
TCTGATATGGAAGAGCAACA+AGG 0.679765 6.4:-51285354 MS.gene05147:CDS
GGATGAAATCTGAAACCTGG+TGG 0.723774 6.4:+51289527 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAAAAAAGTGATA+TGG + chr6.4:51287861-51287880 None:intergenic 10.0%
!! AAATATCACATTATTAAACA+TGG - chr6.4:51285503-51285522 MS.gene05147:intron 15.0%
!! ATTTATCAAATTTGTCATAA+TGG - chr6.4:51285322-51285341 MS.gene05147:CDS 15.0%
!! CTTAAATTAATTTATTCTGA+TGG - chr6.4:51285997-51286016 MS.gene05147:intron 15.0%
!!! TAATCATTTAAAGCATTATT+TGG + chr6.4:51288159-51288178 None:intergenic 15.0%
!!! TAGTTTTTTTTTAGTGATAT+TGG - chr6.4:51287884-51287903 MS.gene05147:intron 15.0%
!!! TCATAATGGAAATTAATATT+TGG - chr6.4:51285336-51285355 MS.gene05147:CDS 15.0%
!!! TTATGTTTGAAGTTTTTTAT+TGG + chr6.4:51286590-51286609 None:intergenic 15.0%
!! AAAAAAAACAATTAACCCTT+TGG - chr6.4:51287250-51287269 MS.gene05147:intron 20.0%
!! AAGAGAAAATTTCTATAATG+AGG + chr6.4:51285910-51285929 None:intergenic 20.0%
!! AAGGGTTAATGAATAATATA+AGG + chr6.4:51287216-51287235 None:intergenic 20.0%
!! AGAAAAAACCAAAAATGTTA+AGG - chr6.4:51286494-51286513 MS.gene05147:intron 20.0%
!! AGTAATAAAACTATACTACT+AGG + chr6.4:51287642-51287661 None:intergenic 20.0%
!! CATGTTACATTTACAAATTA+AGG - chr6.4:51289547-51289566 MS.gene05147:CDS 20.0%
!! GTTTAGTATATAGTATCTAT+TGG + chr6.4:51288079-51288098 None:intergenic 20.0%
!! TAAATATGTTGAAACCATAT+AGG + chr6.4:51288763-51288782 None:intergenic 20.0%
!! TACTAATAATAACTTCAACA+AGG + chr6.4:51286647-51286666 None:intergenic 20.0%
!! TTAAATAAGTTAATCCAAAC+AGG - chr6.4:51288497-51288516 MS.gene05147:CDS 20.0%
!! TTGTCAATTATTATCTAAAG+AGG - chr6.4:51285192-51285211 MS.gene05147:CDS 20.0%
!!! AGGGTTAATTGTTTTTTTTA+AGG + chr6.4:51287249-51287268 None:intergenic 20.0%
!!! ATATTATTCATTAACCCTTT+TGG - chr6.4:51287217-51287236 MS.gene05147:intron 20.0%
!!! ATATTTATCTAGTTCTGTTT+AGG - chr6.4:51288776-51288795 MS.gene05147:intron 20.0%
!!! ATTCTGATGGAATTTTTTTT+TGG - chr6.4:51286010-51286029 MS.gene05147:intron 20.0%
!!! ATTTTGACATTAAAAACCAA+AGG + chr6.4:51287269-51287288 None:intergenic 20.0%
!!! GGTTTTTTCTTAATCATTTT+TGG + chr6.4:51286484-51286503 None:intergenic 20.0%
!!! TATATCCTATTTTAGTTCTT+AGG + chr6.4:51285805-51285824 None:intergenic 20.0%
!!! TATTATTCATTAACCCTTTT+GGG - chr6.4:51287218-51287237 MS.gene05147:intron 20.0%
!!! TATTTGTTCTAAATCCATTA+GGG + chr6.4:51286110-51286129 None:intergenic 20.0%
!!! TTTTGACATTAAAAACCAAA+GGG + chr6.4:51287268-51287287 None:intergenic 20.0%
! AATTTAAGAACTTAGCCTAA+TGG + chr6.4:51285985-51286004 None:intergenic 25.0%
! ACAAAATGAAAGTGATAGAT+AGG + chr6.4:51288016-51288035 None:intergenic 25.0%
! ACAACAATTTAGATTGTTGA+TGG - chr6.4:51286918-51286937 MS.gene05147:intron 25.0%
! ACATTGATATAAGTCATGTT+TGG - chr6.4:51288230-51288249 MS.gene05147:intron 25.0%
! ATTTCATAAGCCTAAAACTA+TGG - chr6.4:51285561-51285580 MS.gene05147:intron 25.0%
! GAAAAAAGAGTTATGAAAGT+AGG + chr6.4:51287369-51287388 None:intergenic 25.0%
! GAAACTAAGTTAATAACTTG+CGG - chr6.4:51286813-51286832 MS.gene05147:intron 25.0%
! GATTAATTTCGTAATGTAGA+TGG - chr6.4:51286954-51286973 MS.gene05147:intron 25.0%
! TATAATGTAGTCAACAATTG+AGG + chr6.4:51288802-51288821 None:intergenic 25.0%
! TATCTAAAGAGGAAAATCAA+TGG - chr6.4:51285203-51285222 MS.gene05147:CDS 25.0%
! TTGTCATATAGAGATATTAG+AGG + chr6.4:51287760-51287779 None:intergenic 25.0%
!! AATGCTTTAAATGATTAAGC+CGG - chr6.4:51288162-51288181 MS.gene05147:intron 25.0%
!! ATGTGTATGTATTTTCCATT+AGG - chr6.4:51285967-51285986 MS.gene05147:intron 25.0%
!! CAGTTTTACAATGTTGAATT+AGG - chr6.4:51288580-51288599 MS.gene05147:CDS 25.0%
!! CATTTAAAGCATTATTTGGT+AGG + chr6.4:51288155-51288174 None:intergenic 25.0%
!! CTATTTGTTCTAAATCCATT+AGG + chr6.4:51286111-51286130 None:intergenic 25.0%
!! TGTTCAAATGCATAATTTTG+AGG + chr6.4:51287120-51287139 None:intergenic 25.0%
!! TTCACACTCATTATTGATTA+TGG + chr6.4:51289389-51289408 None:intergenic 25.0%
!!! GCTTTTTCAGATCAAATATA+TGG + chr6.4:51287418-51287437 None:intergenic 25.0%
!!! TAAAACTGACTTGAAAAATG+AGG + chr6.4:51288568-51288587 None:intergenic 25.0%
!!! TAAATCCATTAGGGTATTTT+CGG + chr6.4:51286101-51286120 None:intergenic 25.0%
!!! TATAAACACTTTTGAGACTA+TGG + chr6.4:51288524-51288543 None:intergenic 25.0%
!!! TTTTAAGGAAAAACCCAAAA+GGG + chr6.4:51287234-51287253 None:intergenic 25.0%
!!! TTTTTAAGGAAAAACCCAAA+AGG + chr6.4:51287235-51287254 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGTGTCCA+AGG - chr6.4:51288934-51288953 MS.gene05147:intron 25.0%
AAAAATTGCAGGAAAATGTG+TGG - chr6.4:51285679-51285698 MS.gene05147:intron 30.0%
AAATGGAATCTGTTCTGATA+TGG - chr6.4:51289315-51289334 MS.gene05147:intron 30.0%
AAGTCATGGTTAATTACGTT+CGG - chr6.4:51287167-51287186 MS.gene05147:intron 30.0%
AATGTCTTCTTCATACCAAT+AGG + chr6.4:51286198-51286217 None:intergenic 30.0%
AATTCATTACAGAAGATGCA+TGG - chr6.4:51289482-51289501 MS.gene05147:CDS 30.0%
ACGATCCTAAGAACTAAAAT+AGG - chr6.4:51285797-51285816 MS.gene05147:intron 30.0%
AGACTGTTTCGAATAACTTA+TGG + chr6.4:51288451-51288470 None:intergenic 30.0%
AGAGTTATGAAAGTAGGTAA+AGG + chr6.4:51287363-51287382 None:intergenic 30.0%
ATCATCTTCATGTTTAGAAG+AGG - chr6.4:51289435-51289454 MS.gene05147:CDS 30.0%
ATCTTTACAAATGTGAACCT+TGG - chr6.4:51285261-51285280 MS.gene05147:CDS 30.0%
ATGAAAGTGATAGATAGGAT+AGG + chr6.4:51288011-51288030 None:intergenic 30.0%
ATTCTTCTCATAATCCATGA+AGG - chr6.4:51287956-51287975 MS.gene05147:intron 30.0%
ATTTGAACCATAAAAGAACG+TGG - chr6.4:51287580-51287599 MS.gene05147:intron 30.0%
CATTTGTAAAGATCAACTTC+AGG + chr6.4:51285254-51285273 None:intergenic 30.0%
CTACTATGCTTATAATCAAG+TGG + chr6.4:51288656-51288675 None:intergenic 30.0%
CTTATGCCATATAAGTATCT+AGG + chr6.4:51288202-51288221 None:intergenic 30.0%
GAGAAAACTACTTCCAAATT+TGG - chr6.4:51285835-51285854 MS.gene05147:intron 30.0%
GCATAATATATGCAAGTTCA+GGG + chr6.4:51288966-51288985 None:intergenic 30.0%
GTATTCTTCTAATACACCAA+TGG - chr6.4:51289504-51289523 MS.gene05147:CDS 30.0%
GTGATATGGATCATATAAGT+AGG + chr6.4:51287847-51287866 None:intergenic 30.0%
TATGGATCATATAAGTAGGT+AGG + chr6.4:51287843-51287862 None:intergenic 30.0%
TATTGGTATGAAGAAGACAT+TGG - chr6.4:51286197-51286216 MS.gene05147:intron 30.0%
TCAAGGAATTAGAACTGATT+GGG - chr6.4:51286242-51286261 MS.gene05147:intron 30.0%
TCATATACAAGCATAAAGTG+AGG + chr6.4:51286853-51286872 None:intergenic 30.0%
TCGATATTGCTAAAAATTGC+AGG - chr6.4:51285668-51285687 MS.gene05147:intron 30.0%
TCTTTACAAATGTGAACCTT+GGG - chr6.4:51285262-51285281 MS.gene05147:CDS 30.0%
TGCATAATATATGCAAGTTC+AGG + chr6.4:51288967-51288986 None:intergenic 30.0%
TTCAATGACATAAACACTTG+TGG + chr6.4:51289208-51289227 None:intergenic 30.0%
TTGTGGCATAAAGATTCAAA+GGG + chr6.4:51288724-51288743 None:intergenic 30.0%
TTTAATGTCGTTCAAAGTCA+TGG - chr6.4:51287153-51287172 MS.gene05147:intron 30.0%
TTTGTGGCATAAAGATTCAA+AGG + chr6.4:51288725-51288744 None:intergenic 30.0%
! ACTAATCTCCATAAGCTTTT+AGG + chr6.4:51288394-51288413 None:intergenic 30.0%
! ATGCTTTAAATGATTAAGCC+GGG - chr6.4:51288163-51288182 MS.gene05147:intron 30.0%
! ATTGCATGCCTTAACATTTT+TGG + chr6.4:51286505-51286524 None:intergenic 30.0%
! CTAATCTCCATAAGCTTTTA+GGG + chr6.4:51288393-51288412 None:intergenic 30.0%
! CTATCACTTTCATTTTGTGT+CGG - chr6.4:51288018-51288037 MS.gene05147:intron 30.0%
! TGAAACTTTTCTGTCTTTAC+CGG + chr6.4:51286163-51286182 None:intergenic 30.0%
!! AAGACATTGGTTTACTATAG+AGG - chr6.4:51286210-51286229 MS.gene05147:intron 30.0%
!! ATGTTACTTTAGCACTACTT+AGG - chr6.4:51288850-51288869 MS.gene05147:intron 30.0%
!! TTGTACTCAAAACTAGTCTT+TGG - chr6.4:51287318-51287337 MS.gene05147:intron 30.0%
!!! TGCAATTTTTAGCAATATCG+AGG + chr6.4:51285669-51285688 None:intergenic 30.0%
AAGCTATCCCTAAAAGCTTA+TGG - chr6.4:51288383-51288402 MS.gene05147:intron 35.0%
AATGCAATCAAGCTCGTTAA+GGG + chr6.4:51289259-51289278 None:intergenic 35.0%
AGATTCATGGTTCAGAATTG+CGG - chr6.4:51285619-51285638 MS.gene05147:intron 35.0%
AGGAAGACAAAGATGATTCA+TGG - chr6.4:51289455-51289474 MS.gene05147:CDS 35.0%
AGTTCTTGCATCAAAGAGTT+TGG - chr6.4:51285460-51285479 MS.gene05147:intron 35.0%
ATATAACCTGCTAATTCCCA+AGG + chr6.4:51285281-51285300 None:intergenic 35.0%
ATCAGTCTAGCACTTAATCA+TGG + chr6.4:51286718-51286737 None:intergenic 35.0%
ATCCTCTACAATCAGCTTTA+CGG - chr6.4:51286359-51286378 MS.gene05147:intron 35.0%
ATGATGTCTCCAGAAATACT+AGG - chr6.4:51289409-51289428 MS.gene05147:intron 35.0%
CTCAAGGAATTAGAACTGAT+TGG - chr6.4:51286241-51286260 MS.gene05147:intron 35.0%
GAACCATGAATCTTAGTTGA+GGG + chr6.4:51285612-51285631 None:intergenic 35.0%
GAGTAGTGATATGGAGAATT+AGG + chr6.4:51285862-51285881 None:intergenic 35.0%
TCTTCTAATACACCAATGGT+TGG - chr6.4:51289508-51289527 MS.gene05147:CDS 35.0%
TGAACCATGAATCTTAGTTG+AGG + chr6.4:51285613-51285632 None:intergenic 35.0%
TGAGGTCCTAGATACTTATA+TGG - chr6.4:51288193-51288212 MS.gene05147:intron 35.0%
TGGAGAATTAGGTCCAAATT+TGG + chr6.4:51285851-51285870 None:intergenic 35.0%
TGTCGTGTGTTCAAGAAAAA+TGG - chr6.4:51289298-51289317 MS.gene05147:intron 35.0%
TTACCTAGAGAGTAGTGATA+TGG + chr6.4:51285871-51285890 None:intergenic 35.0%
TTGACAAGTTCTTCATCAGT+TGG + chr6.4:51285179-51285198 None:intergenic 35.0%
TTGTCAGAGATTGTCCTATA+TGG - chr6.4:51288746-51288765 MS.gene05147:intron 35.0%
! AATCTCATTGCACGATTTTC+AGG - chr6.4:51287043-51287062 MS.gene05147:intron 35.0%
! CAATCAGTTCTAATTCCTTG+AGG + chr6.4:51286243-51286262 None:intergenic 35.0%
! CAGTTTTCCACGTTCTTTTA+TGG + chr6.4:51287590-51287609 None:intergenic 35.0%
! TATAAGTATCTAGGACCTCA+TGG + chr6.4:51288193-51288212 None:intergenic 35.0%
! TCATACCAATAGGTCTGTTT+TGG + chr6.4:51286188-51286207 None:intergenic 35.0%
! TGCTTTAAATGATTAAGCCG+GGG - chr6.4:51288164-51288183 MS.gene05147:intron 35.0%
!! GATCCAGAATGGTACTTTTT+CGG - chr6.4:51286066-51286085 MS.gene05147:intron 35.0%
!! GTCTCAAAAGTGTTTATACG+CGG - chr6.4:51288526-51288545 MS.gene05147:CDS 35.0%
AAAGAACGTGGAAAACTGCA+TGG - chr6.4:51287592-51287611 MS.gene05147:intron 40.0%
ACAAATAGAGCAACAAGAGC+AGG - chr6.4:51286123-51286142 MS.gene05147:intron 40.0%
ACACATACACCACACCAAAA+TGG + chr6.4:51286438-51286457 None:intergenic 40.0%
ATTTCTTCACCACCAACCAT+TGG + chr6.4:51289523-51289542 None:intergenic 40.0%
CAATGCAATCAAGCTCGTTA+AGG + chr6.4:51289260-51289279 None:intergenic 40.0%
CATCGTAAAACTGATTGCAG+AGG - chr6.4:51286410-51286429 MS.gene05147:intron 40.0%
CCTCACACTCTTTATCATCA+AGG + chr6.4:51286284-51286303 None:intergenic 40.0%
GAAAGTAGGTAAAGGCCAAA+GGG + chr6.4:51287355-51287374 None:intergenic 40.0%
GACAATCTCTGACAAGTTTG+TGG + chr6.4:51288741-51288760 None:intergenic 40.0%
GATGATGCTCCTAGTATTTC+TGG + chr6.4:51289421-51289440 None:intergenic 40.0%
TACCAACTGAGATAAGCTCA+CGG - chr6.4:51288994-51289013 MS.gene05147:intron 40.0%
TACCATTCTGGATCTCTACT+TGG + chr6.4:51286060-51286079 None:intergenic 40.0%
TCATGCCAAAACAGACCTAT+TGG - chr6.4:51286180-51286199 MS.gene05147:intron 40.0%
TCTAATACACCAATGGTTGG+TGG - chr6.4:51289511-51289530 MS.gene05147:CDS 40.0%
TCTCCATATCACTACTCTCT+AGG - chr6.4:51285865-51285884 MS.gene05147:intron 40.0%
TCTGATATGGAAGAGCAACA+AGG - chr6.4:51289328-51289347 MS.gene05147:intron 40.0%
TGAAAGTAGGTAAAGGCCAA+AGG + chr6.4:51287356-51287375 None:intergenic 40.0%
TGAGGACAATACTGGATTAC+AGG - chr6.4:51286299-51286318 MS.gene05147:intron 40.0%
! AAAGAGTGTGAGGACAATAC+TGG - chr6.4:51286291-51286310 MS.gene05147:intron 40.0%
! CCTTGATGATAAAGAGTGTG+AGG - chr6.4:51286281-51286300 MS.gene05147:intron 40.0%
! GATTGCAACCTTGAGTTTTC+AGG + chr6.4:51286786-51286805 None:intergenic 40.0%
! GCTAATGCAGCCATAGTTTT+AGG + chr6.4:51285574-51285593 None:intergenic 40.0%
! GTTGGATGAAATCTGAAACC+TGG + chr6.4:51285161-51285180 None:intergenic 40.0%
! TGAGCTTATCTCAGTTGGTA+AGG + chr6.4:51288994-51289013 None:intergenic 40.0%
! TGATTGCAGAGGATCCATTT+TGG - chr6.4:51286421-51286440 MS.gene05147:intron 40.0%
! TTTGAGACTATGGACCTGTT+TGG + chr6.4:51288514-51288533 None:intergenic 40.0%
!! AGGAGAATTGCTGCTTTATG+AGG + chr6.4:51287991-51288010 None:intergenic 40.0%
!! CCTCTAAAACCTTTAGACTG+CGG - chr6.4:51285743-51285762 MS.gene05147:intron 40.0%
!! GGAGAATTGCTGCTTTATGA+GGG + chr6.4:51287990-51288009 None:intergenic 40.0%
!!! AATGGTACTTTTTCGGACCA+CGG - chr6.4:51286073-51286092 MS.gene05147:intron 40.0%
AAACCTGGTGGTAATCCAAC+TGG + chr6.4:51285146-51285165 None:intergenic 45.0%
AACGAGCTTGATTGCATTGC+AGG - chr6.4:51289261-51289280 MS.gene05147:intron 45.0%
AAGCTCGTTAAGGGTCTGTT+TGG + chr6.4:51289250-51289269 None:intergenic 45.0%
ACCAACTGAGATAAGCTCAC+GGG - chr6.4:51288995-51289014 MS.gene05147:intron 45.0%
ATGGTTCAGAATTGCGGCTA+CGG - chr6.4:51285625-51285644 MS.gene05147:intron 45.0%
CACCGTAAAGCTGATTGTAG+AGG + chr6.4:51286364-51286383 None:intergenic 45.0%
CAGCAGTGCAACCACAATTA+TGG + chr6.4:51285714-51285733 None:intergenic 45.0%
CTACACAGCCTGAAAACTCA+AGG - chr6.4:51286775-51286794 MS.gene05147:intron 45.0%
CTCAAGGTTGCAATCAATGC+AGG - chr6.4:51286791-51286810 MS.gene05147:intron 45.0%
CTGCCCTCAACTAAGATTCA+TGG - chr6.4:51285606-51285625 MS.gene05147:intron 45.0%
GCAGGATACTGGAAATCTAC+CGG - chr6.4:51286141-51286160 MS.gene05147:intron 45.0%
GGTCACTGCAACCATAATTG+TGG - chr6.4:51285700-51285719 MS.gene05147:intron 45.0%
TAAAGGCCAAAGGGTCAAGT+GGG + chr6.4:51287346-51287365 None:intergenic 45.0%
TATAGAGGAAGAGCTCCTCA+AGG - chr6.4:51286225-51286244 MS.gene05147:intron 45.0%
TGCCAAGTAGAGATCCAGAA+TGG - chr6.4:51286055-51286074 MS.gene05147:intron 45.0%
TGTGAACCTTGGGAATTAGC+AGG - chr6.4:51285272-51285291 MS.gene05147:CDS 45.0%
! GGATGAAATCTGAAACCTGG+TGG + chr6.4:51285158-51285177 None:intergenic 45.0%
! TGAGGGTGTACAAACCTTCA+TGG + chr6.4:51287973-51287992 None:intergenic 45.0%
!! CCGCAGTCTAAAGGTTTTAG+AGG + chr6.4:51285746-51285765 None:intergenic 45.0%
!! GGTCCGAAAAAGTACCATTC+TGG + chr6.4:51286072-51286091 None:intergenic 45.0%
!!! ATGGTACTTTTTCGGACCAC+GGG - chr6.4:51286074-51286093 MS.gene05147:intron 45.0%
!! TAAAAATAAAATGAAATAAA+GGG - chr6.4:51288108-51288127 MS.gene05147:intron 5.0%
!! TTAAAAATAAAATGAAATAA+AGG - chr6.4:51288107-51288126 MS.gene05147:intron 5.0%
!!! CTTTATATTTTTTTATTATA+AGG - chr6.4:51287693-51287712 MS.gene05147:intron 5.0%
!!! TATAAACTTTTTTTTTTTTT+TGG - chr6.4:51288925-51288944 MS.gene05147:intron 5.0%
AAACCTTTAGACTGCGGTCG+CGG - chr6.4:51285749-51285768 MS.gene05147:intron 50.0%
CAAGTTCAGGGTTCGAACCT+TGG + chr6.4:51288954-51288973 None:intergenic 50.0%
CCAACTGAGATAAGCTCACG+GGG - chr6.4:51288996-51289015 MS.gene05147:intron 50.0%
CGGGACCGAAAATACCCTAA+TGG - chr6.4:51286093-51286112 MS.gene05147:intron 50.0%
GAGCAACAAGAGCAGGATAC+TGG - chr6.4:51286130-51286149 MS.gene05147:intron 50.0%
GTAAAGGCCAAAGGGTCAAG+TGG + chr6.4:51287347-51287366 None:intergenic 50.0%
TCACCAGTTGGATTACCACC+AGG - chr6.4:51285140-51285159 MS.gene05147:CDS 50.0%
TTGTGGTTGCACTGCTGTTG+AGG - chr6.4:51285717-51285736 MS.gene05147:intron 50.0%
! ATTAAGCCGGGGTATCCATG+AGG - chr6.4:51288175-51288194 MS.gene05147:intron 50.0%
!! GCAGAGGATCCATTTTGGTG+TGG - chr6.4:51286426-51286445 MS.gene05147:intron 50.0%
!! TTAGGGTATTTTCGGTCCCG+TGG + chr6.4:51286093-51286112 None:intergenic 50.0%
CAGAATTGCGGCTACGGTTG+TGG - chr6.4:51285631-51285650 MS.gene05147:intron 55.0%
CCCCGTGAGCTTATCTCAGT+TGG + chr6.4:51288999-51289018 None:intergenic 55.0%
CGGTGCAGCAGAGATAGAAG+AGG - chr6.4:51286379-51286398 MS.gene05147:intron 55.0%
CTAGGACCTCATGGATACCC+CGG + chr6.4:51288184-51288203 None:intergenic 55.0%
TAACCGCGACCGCAGTCTAA+AGG + chr6.4:51285755-51285774 None:intergenic 55.0%
! TTGGTGCCCACTTGACCCTT+TGG - chr6.4:51287337-51287356 MS.gene05147:intron 55.0%
GCGGTCGCGGTTAGAGCTGA+AGG - chr6.4:51285762-51285781 MS.gene05147:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 51285137 51289567 51285137 ID=MS.gene05147
chr6.4 mRNA 51285137 51289567 51285137 ID=MS.gene05147.t1;Parent=MS.gene05147
chr6.4 exon 51289411 51289567 51289411 ID=MS.gene05147.t1.exon1;Parent=MS.gene05147.t1
chr6.4 CDS 51289411 51289567 51289411 ID=cds.MS.gene05147.t1;Parent=MS.gene05147.t1
chr6.4 exon 51288384 51288661 51288384 ID=MS.gene05147.t1.exon2;Parent=MS.gene05147.t1
chr6.4 CDS 51288384 51288661 51288384 ID=cds.MS.gene05147.t1;Parent=MS.gene05147.t1
chr6.4 exon 51285137 51285421 51285137 ID=MS.gene05147.t1.exon3;Parent=MS.gene05147.t1
chr6.4 CDS 51285137 51285421 51285137 ID=cds.MS.gene05147.t1;Parent=MS.gene05147.t1
Gene Sequence

>MS.gene05147

ATGTCACCAGTTGGATTACCACCAGGTTTCAGATTTCATCCAACTGATGAAGAACTTGTCAATTATTATCTAAAGAGGAAAATCAATGGTCAAGAAATCGAACTTGATATCATTCCTGAAGTTGATCTTTACAAATGTGAACCTTGGGAATTAGCAGGTTATATACTTTTTTCTTTTTTTTTTTCATTTATCAAATTTGTCATAATGGAAATTAATATTTGGATTGCACATTCACATTTTTTGACTTTCAAGCAATTTCATTTCATTTTTCAATATCATTTGCAAGAAAATGTGTATATATGTCATTAATAATCTAGTTATGAAGTTCTTGCATCAAAGAGTTTGGTGCAACTTTCTGTAATATGAAAATATCACATTATTAAACATGGATTCAAAGTTTATTTATAAACTTGAAAATTGTCTAATTTCATAAGCCTAAAACTATGGCTGCATTAGCTTGACATTTGTGCTGCCCTCAACTAAGATTCATGGTTCAGAATTGCGGCTACGGTTGTGGTTAGACTGCGAACCTCGATATTGCTAAAAATTGCAGGAAAATGTGTGGTCACTGCAACCATAATTGTGGTTGCACTGCTGTTGAGGAGACCTCTAAAACCTTTAGACTGCGGTCGCGGTTAGAGCTGAAGGCTGCAATTTAGAACGATCCTAAGAACTAAAATAGGATATAAAATCTTTATGAGAAAACTACTTCCAAATTTGGACCTAATTCTCCATATCACTACTCTCTAGGTAATATGATCATGCATATACCTCATTATAGAAATTTTCTCTTTTATTTTACATTATTCTTCACTTATCTGTATACATATATGTGTATGTATTTTCCATTAGGCTAAGTTCTTAAATTAATTTATTCTGATGGAATTTTTTTTTGGTAATGTATAGAGAAATCATTTTTGCCAAGTAGAGATCCAGAATGGTACTTTTTCGGACCACGGGACCGAAAATACCCTAATGGATTTAGAACAAATAGAGCAACAAGAGCAGGATACTGGAAATCTACCGGTAAAGACAGAAAAGTTTCATGCCAAAACAGACCTATTGGTATGAAGAAGACATTGGTTTACTATAGAGGAAGAGCTCCTCAAGGAATTAGAACTGATTGGGTTATGCATGAGTATCGCCTTGATGATAAAGAGTGTGAGGACAATACTGGATTACAGGTATATACAACTTATATGCATACTTTTTCGTGATTTAGATCCTCTACAATCAGCTTTACGGTGCAGCAGAGATAGAAGAGGTTACGTTGCATCGTAAAACTGATTGCAGAGGATCCATTTTGGTGTGGTGTATGTGTGTGTGATGCTCAAAGTCATGCAACCAAAAATGATTAAGAAAAAACCAAAAATGTTAAGGCATGCAATGCAAGTGCTTTAAAATTATGTTTTGTCACAATTCTTGTGTGAAAATATTTAGTTATACATGTCCAATAAAAAACTTCAAACATAAAAATCAAAATGTTAATTAAAAAATTTAATAAAGTCCTTGTTGAAGTTATTATTAGTATTATAGTTGCATTGTGTTTTTTCTGAGATGTGTGACTTATAATTGTTTCCATGATTAAGTGCTAGACTGATATAGTTGATAGAATTTTATTGTTAGCTGTCATATTATCTACACAGCCTGAAAACTCAAGGTTGCAATCAATGCAGGAAACTAAGTTAATAACTTGCGGTTTAAAAATAATGTCCTCACTTTATGCTTGTATATGACTAAATTCTTTGACAAAAATAAAATAAAAAATATGACAAAATTCAACAACAATTTAGATTGTTGATGGAGTTCAAATATATGATTAATTTCGTAATGTAGATGGTTAATAAATATAACAAGATGTTATAACTCATTAATCATTCAAAAAATAAAATCAATCACAATTTTGAATCTCATTGCACGATTTTCAGGTGTATATATGAACACAAATTGTTGAATACATATCATGTATATTAAAAAAGTCCTCAAAATTATGCATTTGAACACTTGAAAATCGTGTTTAATGTCGTTCAAAGTCATGGTTAATTACGTTCGGTAGATGATTAATGAATTGTAACACCTTATATTATTCATTAACCCTTTTGGGTTTTTCCTTAAAAAAAACAATTAACCCTTTGGTTTTTAATGTCAAAATTTCATCTCTCATAAAAGCAAATGTTTTTGTTGTACTCAAAACTAGTCTTTGGTGCCCACTTGACCCTTTGGCCTTTACCTACTTTCATAACTCTTTTTTCTTTTGTGTGTATACACACACTTGTCACCATATATTTGATCTGAAAAAGCATGAAGTTTGATTCTTAAAATAGTGACAAAAGCAATTTTCATAATTGTTTTTCAGTTATGATCACAATCACATACTATAGAAACACAGTAAATATATCTTGAAACTAAAGAATTTAATGTACTATATCAAAGAGTTCAGTTAATTTGAACCATAAAAGAACGTGGAAAACTGCATGGTGTGCATGCAAAGCTTCAACTTTTCCTAGTAGTATAGTTTTATTACTTCTTTTTCTCTCTCTTCTCTTATGCATGTTACTTTATATTTTTTTATTATAAGGTATTCTATAAACTTATAACTGACATATTCTTTACTTGTGTTCCTCTAATATCTCTATATGACAAAGTTATATACTGCATCTTATGAATTCTTTTTTGTTAATGTAATGAGACAAAAGTCTTATACCTACCTACTTATATGATCCATATCACTTTTTTAATTAATTAATTAGTTTTTTTTTAGTGATATTGGTCTTTGTCAATTTTTGTCATTGTTATGTTTTATGATCTAGAATTATTAGATTCTTCTCATAATCCATGAAGGTTTGTACACCCTCATAAAGCAGCAATTCTCCTATCCTATCTATCACTTTCATTTTGTGTCGGTCACTTTTTACTTTATTCTTGAACACAAAAATAGACCAATAGATACTATATACTAAACTAAATAAATTAAAAATAAAATGAAATAAAGGGATATAGAGAAACAGTTCAATACCTACCAAATAATGCTTTAAATGATTAAGCCGGGGTATCCATGAGGTCCTAGATACTTATATGGCATAAGAGTCGTACACATTGATATAAGTCATGTTTGGACAAATGTCTTAATTATGTGCTTATAGCATAAACATTTATCATTCAAGTGTTTATAATGTGTTCAGTTATTTTTATAACAATAGATAAAATAAAGTCAAATTATTTTCACATGTTATAATTTGTTTTCATAAGCTATCCCTAAAAGCTTATGGAGATTAGTTGAAAACAATTTATGAACATGTCATAAGTGTGTTCCATAAGTTATTCGAAACAGTCTCAAAAATGTTTGTGTAATAGATAAAATTAAATAAGTTAATCCAAACAGGTCCATAGTCTCAAAAGTGTTTATACGCGGCAGACTACTAGATATTCCTCATTTTTCAAGTCAGTTTTACAATGTTGAATTAGGCTTAATCTAAATTCTAAGATAATATATACAATACAGTATCTTAAAAGTTTCCACTTGATTATAAGCATAGTAGCATCATTATTAATTAACAATACTCGTAAACAAGAAACATTTAGCACCCTTTGAATCTTTATGCCACAAACTTGTCAGAGATTGTCCTATATGGTTTCAACATATTTATCTAGTTCTGTTTAGGCCTCAATTGTTGACTACATTATAATATGATTTAATTTGAGTTTATGATTCTATGTTACTTTAGCACTACTTAGGCTCAGTTTGAATAAATAGTTGAATTTAACATTTATACTATAAACACTTATCATATAAACTTTTTTTTTTTTTTGGTGTCCAAGGTTCGAACCCTGAACTTGCATATATTATGCATTGTCCTTACCAACTGAGATAAGCTCACGGGGACACTTATCATATAACTGATTATGAATAAACTATTTTCAATATAAAAGATAAAATAAAAGTCAACTTTTTTATTTATAAGCTATAAGCTGTTTTTATAAATTATCTTTAAAAGTTTATGGAAATAAGTTGAAAATAGCTTATAGACATGTCATGAACTTGTGTAAATTCTTTCAAACTGTCATGTTCCACAAGTGTTTATGTCATTGAATAAACTCAAATAAGTCAATCCAAACAGACCCTTAACGAGCTTGATTGCATTGCAGGATACATACGCATTGTGTCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATGGAAGAGCAACAAGGACAATGTAGCATGTTACAAATTGAATGTTCTCAAACCATAATCAATAATGAGTGTGAAATGATGTCTCCAGAAATACTAGGAGCATCATCTTCATGTTTAGAAGAGGAAGACAAAGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTATTCTTCTAATACACCAATGGTTGGTGGTGAAGAAATTTCACATGTTACATTTACAAATTAA
Protein sequence

>MS.gene05147.t1

MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSCQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDNTGLQDTYALCRVFKKNGICSDMEEQQGQCSMLQIECSQTIINNECEMMSPEILGASSSCLEEEDKDDSWMQFITEDAWYSSNTPMVGGEEISHVTFTN