AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051814

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051814.t1 MTR_4g125520 95.114 307 15 0 1 307 1 307 0.0 605
MS.gene051814.t1 MTR_7g117730 74.380 121 31 0 1 121 1 121 1.65e-67 211
MS.gene051814.t1 MTR_8g027345 75.207 121 30 0 1 121 1 121 2.67e-65 207
MS.gene051814.t1 MTR_3g083540 75.893 112 27 0 5 116 34 145 5.14e-62 199
MS.gene051814.t1 MTR_4g121460 65.891 129 44 0 1 129 1 129 4.05e-60 195
MS.gene051814.t1 MTR_3g097450 73.276 116 31 0 1 116 1 116 1.37e-59 192
MS.gene051814.t1 MTR_2g034790 62.143 140 53 0 1 140 1 140 2.66e-59 193
MS.gene051814.t1 MTR_4g073420 70.690 116 34 0 1 116 1 116 2.79e-58 189
MS.gene051814.t1 MTR_5g079670 70.175 114 34 0 3 116 2 115 7.02e-58 185
MS.gene051814.t1 MTR_1g100653 57.931 145 52 1 1 136 1 145 2.03e-57 187
MS.gene051814.t1 MTR_1g076150 62.879 132 44 1 1 132 1 127 1.89e-56 183
MS.gene051814.t1 MTR_8g020490 58.140 172 57 4 1 166 1 163 4.62e-56 182
MS.gene051814.t1 MTR_7g115650 59.843 127 51 0 1 127 1 127 5.77e-56 180
MS.gene051814.t1 MTR_7g096930 60.294 136 53 1 1 136 1 135 1.95e-55 181
MS.gene051814.t1 MTR_1g043050 52.201 159 74 1 1 159 1 157 2.25e-55 180
MS.gene051814.t1 MTR_2g089620 68.103 116 37 0 1 116 1 116 2.91e-55 182
MS.gene051814.t1 MTR_7g076740 65.833 120 40 1 1 119 1 120 5.22e-55 181
MS.gene051814.t1 MTR_4g478180 67.241 116 38 0 1 116 2 117 5.96e-55 182
MS.gene051814.t1 MTR_4g100720 65.323 124 43 0 8 131 9 132 7.79e-55 176
MS.gene051814.t1 MTR_2g011660 67.521 117 37 1 1 116 1 117 9.83e-55 181
MS.gene051814.t1 MTR_4g091490 68.376 117 36 1 1 116 1 117 1.70e-54 181
MS.gene051814.t1 MTR_7g011170 66.387 119 40 0 1 119 1 119 3.19e-54 179
MS.gene051814.t1 MTR_1g043080 63.793 116 42 0 1 116 1 116 1.08e-53 176
MS.gene051814.t1 MTR_3g074520 63.866 119 43 0 1 119 1 119 1.38e-53 178
MS.gene051814.t1 MTR_8g095390 65.517 116 40 0 1 116 1 116 1.91e-53 177
MS.gene051814.t1 MTR_0251s0050 58.571 140 57 1 1 139 1 140 3.12e-53 175
MS.gene051814.t1 MTR_6g012690 46.939 196 94 2 1 186 1 196 9.75e-53 177
MS.gene051814.t1 MTR_4g082290 68.103 116 37 0 1 116 1 116 1.35e-52 177
MS.gene051814.t1 MTR_7g109320 47.899 238 112 5 1 230 1 234 2.64e-52 175
MS.gene051814.t1 MTR_5g029840 66.379 116 39 0 1 116 1 116 8.21e-52 174
MS.gene051814.t1 MTR_7g010210 61.789 123 47 0 1 123 1 123 2.25e-51 172
MS.gene051814.t1 MTR_7g010210 61.789 123 47 0 1 123 1 123 4.48e-51 170
MS.gene051814.t1 MTR_0008s0470 57.664 137 57 1 1 136 1 137 1.31e-50 169
MS.gene051814.t1 MTR_1g017000 48.810 168 65 4 1 147 1 168 1.59e-50 167
MS.gene051814.t1 MTR_2g089450 54.795 146 64 1 1 146 1 144 1.62e-50 167
MS.gene051814.t1 MTR_3g065440 57.971 138 58 0 1 138 1 138 2.83e-50 169
MS.gene051814.t1 MTR_0008s0390 56.835 139 59 1 1 138 1 139 2.98e-50 167
MS.gene051814.t1 MTR_3g461490 60.504 119 47 0 1 119 1 119 4.82e-50 169
MS.gene051814.t1 MTR_4g082230 66.379 116 39 0 1 116 1 116 6.04e-50 171
MS.gene051814.t1 MTR_5g007370 62.185 119 45 0 1 119 1 119 1.55e-49 167
MS.gene051814.t1 MTR_4g102380 64.655 116 41 0 1 116 1 116 2.62e-49 165
MS.gene051814.t1 MTR_8g031360 63.559 118 41 2 1 116 1 118 2.74e-49 166
MS.gene051814.t1 MTR_1g085040 61.017 118 46 0 1 118 1 118 3.57e-49 167
MS.gene051814.t1 MTR_3g039990 38.182 275 140 5 1 254 2 267 4.31e-49 166
MS.gene051814.t1 MTR_4g105130 50.667 150 74 0 1 150 1 150 5.19e-49 167
MS.gene051814.t1 MTR_3g077110 47.619 168 79 2 1 162 1 165 5.64e-49 167
MS.gene051814.t1 MTR_5g078140 62.185 119 45 0 1 119 1 119 7.32e-49 166
MS.gene051814.t1 MTR_4g485530 65.217 115 39 1 3 116 2 116 1.03e-48 161
MS.gene051814.t1 MTR_7g110830 60.684 117 46 0 1 117 1 117 1.92e-48 166
MS.gene051814.t1 MTR_0140s0030 60.345 116 46 0 1 116 2 117 2.98e-48 164
MS.gene051814.t1 MTR_0489s0020 60.345 116 46 0 1 116 2 117 2.98e-48 164
MS.gene051814.t1 MTR_5g079120 53.901 141 65 0 9 149 58 198 3.27e-48 163
MS.gene051814.t1 MTR_0063s0090 52.740 146 69 0 1 146 1 146 3.76e-48 160
MS.gene051814.t1 MTR_8g060940 42.975 242 108 3 11 233 6 236 4.59e-48 161
MS.gene051814.t1 MTR_8g098860 58.120 117 49 0 1 117 1 117 9.45e-48 162
MS.gene051814.t1 MTR_0197s0010 58.537 123 51 0 16 138 5 127 9.53e-48 160
MS.gene051814.t1 MTR_7g087130 61.207 116 45 0 1 116 1 116 1.24e-47 163
MS.gene051814.t1 MTR_1g085640 58.974 117 48 0 1 117 1 117 2.03e-47 164
MS.gene051814.t1 MTR_4g057635 58.678 121 49 1 1 120 1 121 2.58e-47 161
MS.gene051814.t1 MTR_5g079220 44.776 201 104 3 7 207 16 209 5.48e-47 159
MS.gene051814.t1 MTR_1g112760 51.701 147 64 2 3 145 4 147 7.46e-47 157
MS.gene051814.t1 MTR_7g111290 64.220 109 39 0 1 109 1 109 1.52e-46 161
MS.gene051814.t1 MTR_1g017140 52.055 146 63 3 1 140 1 145 1.82e-46 160
MS.gene051814.t1 MTR_7g017260 55.147 136 57 2 11 144 24 157 2.83e-46 157
MS.gene051814.t1 MTR_2g099740 57.759 116 49 0 1 116 1 116 3.35e-46 160
MS.gene051814.t1 MTR_5g078800 67.925 106 34 0 11 116 6 111 3.38e-46 157
MS.gene051814.t1 MTR_8g017440 56.897 116 50 0 1 116 1 116 3.67e-46 159
MS.gene051814.t1 MTR_2g089420 49.412 170 71 4 1 169 1 156 4.07e-46 162
MS.gene051814.t1 MTR_6g009430 60.345 116 46 0 1 116 1 116 4.39e-46 159
MS.gene051814.t1 MTR_2g067420 62.727 110 41 0 2 111 4 113 4.68e-46 158
MS.gene051814.t1 MTR_6g012180 61.818 110 42 0 1 110 1 110 6.21e-46 158
MS.gene051814.t1 MTR_8g017540 56.897 116 50 0 1 116 47 162 1.10e-45 159
MS.gene051814.t1 MTR_5g010020 59.091 110 45 0 1 110 1 110 1.48e-45 157
MS.gene051814.t1 MTR_2g095520 56.154 130 56 1 1 129 1 130 2.39e-45 156
MS.gene051814.t1 MTR_3g103570 57.265 117 49 1 1 116 1 117 2.41e-45 157
MS.gene051814.t1 MTR_5g014990 51.079 139 67 1 1 138 1 139 3.03e-45 155
MS.gene051814.t1 MTR_2g064160 54.331 127 54 1 6 128 5 131 3.64e-45 155
MS.gene051814.t1 MTR_5g079290 52.518 139 65 1 11 149 16 153 3.65e-45 154
MS.gene051814.t1 MTR_0001s0360 53.957 139 63 1 11 149 6 143 3.81e-45 154
MS.gene051814.t1 MTR_8g017390 44.149 188 97 5 1 182 1 186 1.07e-44 158
MS.gene051814.t1 MTR_7g102110 55.833 120 52 1 1 119 1 120 1.26e-44 153
MS.gene051814.t1 MTR_0008s0280 44.382 178 83 2 1 173 1 167 1.55e-44 152
MS.gene051814.t1 MTR_5g078950 53.957 139 63 1 11 149 6 143 1.73e-44 152
MS.gene051814.t1 MTR_8g017500 55.172 116 52 0 1 116 1 116 3.51e-44 154
MS.gene051814.t1 MTR_6g090405 56.897 116 49 1 1 115 1 116 4.22e-44 151
MS.gene051814.t1 MTR_1g086510 62.727 110 41 0 11 120 20 129 4.41e-44 151
MS.gene051814.t1 MTR_2g097910 57.627 118 46 1 12 129 20 133 4.55e-44 153
MS.gene051814.t1 MTR_5g078910 52.174 138 66 0 12 149 7 144 5.40e-44 152
MS.gene051814.t1 MTR_0247s0040 66.667 102 34 0 11 112 6 107 5.53e-44 149
MS.gene051814.t1 MTR_4g065017 45.732 164 89 0 12 175 17 180 9.28e-44 152
MS.gene051814.t1 MTR_8g017340 56.410 117 50 1 1 116 1 117 9.37e-44 156
MS.gene051814.t1 MTR_5g078860 65.094 106 37 0 11 116 6 111 9.48e-44 152
MS.gene051814.t1 MTR_1g045610 60.909 110 43 0 9 118 18 127 9.56e-44 150
MS.gene051814.t1 MTR_6g006030 54.331 127 56 1 1 125 1 127 1.24e-43 149
MS.gene051814.t1 MTR_1g073170 63.810 105 38 0 14 118 22 126 1.30e-43 150
MS.gene051814.t1 MTR_7g035075 60.870 115 43 1 12 126 14 126 1.33e-43 148
MS.gene051814.t1 MTR_1g110460 62.037 108 41 0 12 119 26 133 3.99e-43 150
MS.gene051814.t1 MTR_4g097570 58.182 110 45 1 1 109 1 110 5.27e-43 149
MS.gene051814.t1 MTR_5g078930 44.211 190 85 4 16 205 13 181 7.16e-43 147
MS.gene051814.t1 MTR_8g017350 55.556 117 51 1 1 116 1 117 9.53e-43 155
MS.gene051814.t1 MTR_0193s0090 57.143 119 51 0 11 129 6 124 1.60e-42 145
MS.gene051814.t1 MTR_5g042030 64.151 106 38 0 11 116 6 111 1.88e-42 148
MS.gene051814.t1 MTR_4g128670 55.856 111 48 1 1 110 1 111 7.57e-42 148
MS.gene051814.t1 MTR_3g028740 59.633 109 44 0 9 117 19 127 1.25e-41 147
MS.gene051814.t1 MTR_4g097570 57.658 111 45 2 1 109 1 111 1.67e-41 145
MS.gene051814.t1 MTR_1g086530 56.881 109 47 0 12 120 33 141 7.48e-41 143
MS.gene051814.t1 MTR_3g011610 58.491 106 44 0 12 117 37 142 9.91e-41 148
MS.gene051814.t1 MTR_6g055910 49.007 151 66 4 7 146 9 159 4.63e-40 141
MS.gene051814.t1 MTR_1g100667 54.701 117 52 1 1 116 1 117 4.16e-39 139
MS.gene051814.t1 MTR_3g052430 57.547 106 45 0 12 117 41 146 4.67e-39 144
MS.gene051814.t1 MTR_3g052450 56.604 106 46 0 12 117 40 145 8.40e-39 143
MS.gene051814.t1 MTR_8g042410 57.692 104 44 0 12 115 37 140 4.67e-38 141
MS.gene051814.t1 MTR_2g033170 61.468 109 42 0 12 120 24 132 6.06e-38 137
MS.gene051814.t1 MTR_2g088170 56.364 110 48 0 8 117 25 134 7.20e-37 137
MS.gene051814.t1 MTR_1g083630 55.660 106 47 0 12 117 12 117 7.48e-37 139
MS.gene051814.t1 MTR_4g123040 60.550 109 43 0 12 120 24 132 1.05e-36 134
MS.gene051814.t1 MTR_1g062940 57.798 109 46 0 12 120 6 114 1.10e-36 131
MS.gene051814.t1 MTR_1g021230 56.731 104 45 0 12 115 57 160 1.20e-36 136
MS.gene051814.t1 MTR_4g063100 54.128 109 50 0 7 115 2 110 5.70e-36 130
MS.gene051814.t1 MTR_2g096380 49.167 120 61 0 8 127 2 121 2.46e-35 128
MS.gene051814.t1 MTR_5g007300 60.227 88 35 0 1 88 53 140 1.53e-33 120
MS.gene051814.t1 MTR_3g045430 45.833 120 64 1 1 119 1 120 5.41e-31 118
MS.gene051814.t1 MTR_7g111290 75.758 66 16 0 44 109 2 67 6.42e-30 116
MS.gene051814.t1 MTR_6g055910 53.982 113 41 4 45 146 18 130 6.67e-30 114
MS.gene051814.t1 MTR_5g062790 51.020 98 47 1 14 110 11 108 2.32e-29 114
MS.gene051814.t1 MTR_5g088080 48.980 98 49 1 14 110 14 111 1.14e-28 111
MS.gene051814.t1 MTR_5g088150 48.980 98 49 1 14 110 14 111 1.14e-28 111
MS.gene051814.t1 MTR_5g488210 48.980 98 49 1 14 110 14 111 1.14e-28 111
MS.gene051814.t1 MTR_5g488170 48.980 98 49 1 14 110 14 111 1.56e-28 110
MS.gene051814.t1 MTR_5g088640 48.980 98 49 1 14 110 14 111 1.58e-28 111
MS.gene051814.t1 MTR_4g063100 65.278 72 25 0 44 115 10 81 8.72e-28 107
MS.gene051814.t1 MTR_2g096380 55.952 84 37 0 44 127 19 102 4.79e-27 105
MS.gene051814.t1 MTR_8g006470 43.689 103 57 1 9 110 7 109 1.82e-26 105
MS.gene051814.t1 MTR_5g088610 48.980 98 49 1 14 110 11 108 2.14e-26 107
MS.gene051814.t1 MTR_5g070020 36.047 172 92 4 10 177 118 275 1.19e-25 105
MS.gene051814.t1 MTR_3g463400 45.946 111 58 2 1 110 119 228 2.53e-25 105
MS.gene051814.t1 MTR_7g037260 31.839 223 118 5 14 221 145 348 4.70e-25 103
MS.gene051814.t1 MTR_3g077650 45.614 114 51 3 3 110 168 276 6.54e-25 104
MS.gene051814.t1 MTR_5g049190 46.000 100 53 1 9 108 14 112 6.55e-25 100
MS.gene051814.t1 MTR_4g029540 44.000 100 55 1 12 110 10 109 9.58e-25 101
MS.gene051814.t1 MTR_3g101290 47.573 103 53 1 14 116 37 138 1.60e-24 99.4
MS.gene051814.t1 MTR_5g041570 33.523 176 107 4 2 177 127 292 3.16e-24 102
MS.gene051814.t1 MTR_4g105660 47.959 98 48 2 14 110 180 275 3.43e-24 102
MS.gene051814.t1 MTR_4g019370 34.637 179 99 5 14 186 38 204 4.17e-24 100
MS.gene051814.t1 MTR_4g082040 41.880 117 62 2 2 118 98 208 6.10e-24 101
MS.gene051814.t1 MTR_0023s0210 53.846 78 36 0 11 88 6 83 8.09e-24 93.2
MS.gene051814.t1 MTR_4g128190 44.118 102 43 2 10 110 9 97 1.14e-23 97.4
MS.gene051814.t1 MTR_5g016510 41.593 113 65 1 14 126 5 116 1.51e-23 98.6
MS.gene051814.t1 MTR_4g088015 41.739 115 64 2 14 128 221 332 3.05e-23 99.4
MS.gene051814.t1 MTR_4g094982 46.078 102 54 1 14 115 5 105 3.42e-23 96.7
MS.gene051814.t1 MTR_7g451170 41.739 115 64 2 14 128 191 302 5.18e-23 98.6
MS.gene051814.t1 MTR_1g085880 48.421 95 48 1 17 110 17 111 9.79e-23 93.6
MS.gene051814.t1 MTR_6g027360 34.911 169 95 5 12 180 76 229 1.83e-22 95.5
MS.gene051814.t1 MTR_6g074860 43.137 102 55 2 14 114 4 103 2.64e-22 93.6
MS.gene051814.t1 MTR_1g085770 47.525 101 51 2 12 110 11 111 3.79e-22 94.7
MS.gene051814.t1 MTR_7g450950 45.361 97 52 1 14 110 157 252 4.22e-22 95.1
MS.gene051814.t1 MTR_6g027340 30.049 203 128 4 14 216 16 204 4.76e-22 92.0
MS.gene051814.t1 MTR_1g057980 45.455 99 53 1 12 110 78 175 4.92e-22 94.0
MS.gene051814.t1 MTR_6g015455 45.098 102 55 1 14 115 5 105 5.37e-22 97.1
MS.gene051814.t1 MTR_7g061330 44.762 105 57 1 12 116 111 214 5.75e-22 96.3
MS.gene051814.t1 MTR_7g461410 44.762 105 57 1 12 116 111 214 5.75e-22 96.3
MS.gene051814.t1 MTR_7g035350 47.872 94 48 1 17 110 228 320 7.96e-22 95.5
MS.gene051814.t1 MTR_7g061330 44.762 105 57 1 12 116 75 178 1.11e-21 95.5
MS.gene051814.t1 MTR_3g110028 35.417 144 83 2 12 155 83 216 1.85e-21 95.1
MS.gene051814.t1 MTR_1g026870 34.459 148 86 3 12 158 83 220 3.46e-21 94.4
MS.gene051814.t1 MTR_7g037130 29.825 228 124 7 14 226 145 351 6.39e-21 92.0
MS.gene051814.t1 MTR_3g089045 40.000 105 62 1 14 118 16 119 1.70e-19 87.0
MS.gene051814.t1 MTR_7g061550 38.462 117 65 2 13 127 6 117 1.74e-19 87.8
MS.gene051814.t1 MTR_6g027370 41.509 106 61 1 14 119 99 203 2.79e-19 87.4
MS.gene051814.t1 MTR_5g082910 42.424 99 56 1 14 112 19 116 3.83e-19 85.9
MS.gene051814.t1 MTR_7g086960 40.000 115 63 2 1 115 81 189 5.09e-19 86.7
MS.gene051814.t1 MTR_5g010650 41.837 98 56 1 12 109 108 204 1.85e-18 85.9
MS.gene051814.t1 MTR_5g038910 38.614 101 61 1 17 117 29 128 5.05e-17 81.6
MS.gene051814.t1 MTR_5g038910 38.614 101 61 1 17 117 29 128 8.73e-17 80.5
MS.gene051814.t1 MTR_2g088730 78.947 38 8 0 71 108 35 72 7.57e-16 71.6
MS.gene051814.t1 MTR_8g468380 36.842 95 59 1 16 110 24 117 1.17e-14 74.3
MS.gene051814.t1 MTR_6g055910 47.727 88 35 4 70 146 2 89 4.09e-14 70.5
MS.gene051814.t1 MTR_2g096380 53.704 54 25 0 74 127 5 58 2.00e-12 64.7
MS.gene051814.t1 MTR_4g063100 60.870 46 18 0 70 115 1 46 4.14e-12 64.3
MS.gene051814.t1 MTR_4g046737 58.537 41 17 0 70 110 28 68 2.48e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051814.t1 AT5G35550 48.837 258 102 5 9 261 11 243 3.08e-68 213
MS.gene051814.t1 AT3G13540 74.336 113 29 0 4 116 15 127 1.84e-60 193
MS.gene051814.t1 AT1G22640 70.690 116 34 0 1 116 1 116 2.53e-60 193
MS.gene051814.t1 AT4G09460 46.725 229 98 5 1 229 1 205 2.73e-60 192
MS.gene051814.t1 AT2G47460 56.863 153 66 0 1 153 1 153 9.82e-60 195
MS.gene051814.t1 AT2G16720 71.552 116 33 0 1 116 1 116 1.64e-59 191
MS.gene051814.t1 AT5G49330 71.552 116 33 0 1 116 1 116 2.43e-59 193
MS.gene051814.t1 AT4G38620 61.111 144 53 1 1 144 1 141 5.74e-59 191
MS.gene051814.t1 AT1G35515 56.954 151 62 1 1 148 1 151 2.61e-58 186
MS.gene051814.t1 AT3G23250 58.741 143 51 1 1 143 1 135 1.29e-57 187
MS.gene051814.t1 AT4G34990 70.690 116 34 0 1 116 1 116 2.53e-57 186
MS.gene051814.t1 AT4G28110 67.241 116 38 0 1 116 1 116 3.02e-57 186
MS.gene051814.t1 AT1G06180 67.480 123 40 0 1 123 1 123 3.41e-57 185
MS.gene051814.t1 AT3G62610 62.121 132 50 0 1 132 1 132 4.68e-57 187
MS.gene051814.t1 AT4G21440 68.103 116 37 0 1 116 1 116 1.79e-56 186
MS.gene051814.t1 AT5G16770 69.828 116 35 0 1 116 1 116 3.48e-56 184
MS.gene051814.t1 AT5G16770 69.828 116 35 0 1 116 1 116 3.48e-56 184
MS.gene051814.t1 AT5G16770 69.828 116 35 0 1 116 1 116 5.72e-56 184
MS.gene051814.t1 AT5G16770 69.828 116 35 0 1 116 1 116 5.72e-56 184
MS.gene051814.t1 AT3G02940 68.103 116 37 0 1 116 1 116 6.14e-56 184
MS.gene051814.t1 AT3G02940 68.103 116 37 0 1 116 1 116 1.18e-55 183
MS.gene051814.t1 AT3G02940 68.103 116 37 0 1 116 1 116 1.18e-55 183
MS.gene051814.t1 AT4G05100 67.521 117 37 1 1 116 1 117 1.35e-55 183
MS.gene051814.t1 AT5G60890 66.667 117 39 0 1 117 1 117 3.96e-55 181
MS.gene051814.t1 AT5G14750 62.595 131 45 2 14 144 18 144 3.85e-54 176
MS.gene051814.t1 AT2G31180 66.379 116 39 0 1 116 1 116 1.35e-53 176
MS.gene051814.t1 AT3G61250 65.517 116 40 0 1 116 1 116 1.37e-53 177
MS.gene051814.t1 AT5G15310 42.308 234 121 4 1 225 1 229 2.05e-53 177
MS.gene051814.t1 AT5G07690 65.254 118 41 0 1 118 1 118 2.34e-53 177
MS.gene051814.t1 AT5G15310 44.444 225 118 5 1 225 1 218 2.56e-53 177
MS.gene051814.t1 AT5G61420 50.000 186 77 5 1 180 1 176 3.91e-53 178
MS.gene051814.t1 AT3G01140 67.241 116 38 0 1 116 1 116 5.37e-53 177
MS.gene051814.t1 AT5G15310 67.241 116 38 0 1 116 1 116 5.75e-53 174
MS.gene051814.t1 AT1G34670 65.517 116 40 0 1 116 1 116 9.31e-52 174
MS.gene051814.t1 AT1G74080 66.667 114 38 0 1 114 1 114 1.62e-51 173
MS.gene051814.t1 AT1G18570 56.552 145 57 2 1 139 1 145 3.31e-51 172
MS.gene051814.t1 AT5G40330 68.932 103 32 0 14 116 14 116 7.00e-51 167
MS.gene051814.t1 AT5G26660 64.103 117 42 0 1 117 1 117 7.93e-51 171
MS.gene051814.t1 AT5G62470 54.795 146 57 1 1 137 1 146 1.06e-50 171
MS.gene051814.t1 AT5G10280 65.517 116 40 0 1 116 1 116 1.14e-50 171
MS.gene051814.t1 AT5G07700 44.792 192 84 3 1 182 1 180 1.27e-50 171
MS.gene051814.t1 AT5G07700 44.792 192 84 3 1 182 1 180 1.27e-50 171
MS.gene051814.t1 AT4G17785 64.957 117 40 1 1 116 1 117 1.28e-50 171
MS.gene051814.t1 AT4G17785 64.957 117 40 1 1 116 1 117 1.40e-50 171
MS.gene051814.t1 AT4G12350 64.167 120 43 0 1 120 1 120 4.73e-50 167
MS.gene051814.t1 AT5G52600 62.903 124 43 1 6 126 3 126 6.37e-50 164
MS.gene051814.t1 AT3G01140 66.372 113 38 0 4 116 47 159 6.95e-50 170
MS.gene051814.t1 AT5G56110 61.345 119 46 0 1 119 1 119 8.69e-50 168
MS.gene051814.t1 AT3G47600 61.345 119 46 0 1 119 1 119 8.97e-50 168
MS.gene051814.t1 AT4G22680 65.517 116 40 0 1 116 1 116 1.02e-49 166
MS.gene051814.t1 AT1G16490 51.020 147 70 1 2 148 4 148 1.97e-49 166
MS.gene051814.t1 AT4G01680 62.393 117 44 0 1 117 1 117 4.79e-49 164
MS.gene051814.t1 AT1G56160 62.609 115 43 0 2 116 4 118 8.96e-49 164
MS.gene051814.t1 AT1G09540 61.538 117 45 0 1 117 1 117 1.10e-48 166
MS.gene051814.t1 AT5G65230 62.069 116 44 0 1 116 1 116 1.23e-48 165
MS.gene051814.t1 AT4G01680 62.393 117 44 0 1 117 1 117 1.31e-48 165
MS.gene051814.t1 AT1G57560 61.207 116 45 0 1 116 1 116 1.32e-48 165
MS.gene051814.t1 AT1G57560 61.207 116 45 0 1 116 1 116 1.65e-48 163
MS.gene051814.t1 AT5G54230 63.793 116 42 0 1 116 1 116 2.69e-48 164
MS.gene051814.t1 AT5G62470 54.110 146 57 2 1 137 1 145 3.98e-48 164
MS.gene051814.t1 AT1G74650 59.350 123 50 0 1 123 1 123 5.65e-48 164
MS.gene051814.t1 AT1G66370 65.217 115 36 1 1 115 1 111 7.10e-48 160
MS.gene051814.t1 AT3G27920 66.019 103 35 0 14 116 16 118 7.41e-48 160
MS.gene051814.t1 AT1G66230 60.504 119 47 0 1 119 1 119 1.13e-47 161
MS.gene051814.t1 AT1G08810 43.878 196 103 4 1 193 1 192 1.85e-47 160
MS.gene051814.t1 AT5G35550 45.495 222 91 5 45 261 50 246 4.78e-47 159
MS.gene051814.t1 AT1G63910 58.120 117 49 0 1 117 1 117 6.67e-47 162
MS.gene051814.t1 AT5G16600 50.649 154 64 1 1 142 1 154 7.27e-47 160
MS.gene051814.t1 AT3G13890 57.759 116 49 0 1 116 1 116 9.76e-47 161
MS.gene051814.t1 AT3G28910 58.678 121 50 0 1 121 1 121 1.64e-46 159
MS.gene051814.t1 AT1G79180 59.130 115 47 0 2 116 4 118 3.43e-46 158
MS.gene051814.t1 AT4G37780 55.556 117 51 1 1 116 1 117 9.49e-46 157
MS.gene051814.t1 AT5G65790 51.079 139 67 1 1 138 1 139 1.21e-45 159
MS.gene051814.t1 AT5G14340 61.345 119 46 0 1 119 13 131 1.36e-45 155
MS.gene051814.t1 AT5G57620 56.098 123 53 1 1 122 1 123 2.29e-45 157
MS.gene051814.t1 AT3G28470 59.091 110 45 0 1 110 1 110 2.37e-45 156
MS.gene051814.t1 AT4G01680 56.589 129 44 1 1 117 1 129 3.12e-45 157
MS.gene051814.t1 AT5G23000 58.974 117 47 1 1 116 1 117 3.31e-45 156
MS.gene051814.t1 AT3G24310 62.727 110 41 0 8 117 14 123 3.88e-45 154
MS.gene051814.t1 AT3G49690 55.285 123 54 1 1 122 1 123 1.00e-44 154
MS.gene051814.t1 AT1G74430 59.483 116 47 0 1 116 1 116 1.08e-44 153
MS.gene051814.t1 AT5G62320 49.020 153 67 2 2 143 3 155 3.75e-44 151
MS.gene051814.t1 AT3G12720 54.955 111 50 0 6 116 16 126 6.65e-44 152
MS.gene051814.t1 AT3G13890 53.600 125 49 1 1 116 1 125 1.01e-43 153
MS.gene051814.t1 AT2G36890 57.265 117 49 1 1 116 1 117 1.07e-43 151
MS.gene051814.t1 AT2G36890 57.265 117 49 1 1 116 42 158 1.47e-43 152
MS.gene051814.t1 AT5G12870 60.185 108 43 0 12 119 18 125 1.93e-43 150
MS.gene051814.t1 AT4G13480 53.030 132 58 1 8 139 2 129 2.36e-43 149
MS.gene051814.t1 AT3G12820 57.895 114 48 0 3 116 5 118 3.48e-43 148
MS.gene051814.t1 AT1G66380 70.755 106 31 0 10 115 6 111 1.04e-42 144
MS.gene051814.t1 AT2G47190 56.881 109 47 0 12 120 20 128 1.37e-42 148
MS.gene051814.t1 AT3G01530 60.377 106 42 0 12 117 25 130 2.17e-42 145
MS.gene051814.t1 AT3G27810 55.462 119 53 0 8 126 16 134 3.02e-42 145
MS.gene051814.t1 AT1G56650 67.593 108 35 0 8 115 4 111 7.28e-42 145
MS.gene051814.t1 AT1G18710 55.172 116 52 0 1 116 1 116 1.18e-41 145
MS.gene051814.t1 AT1G48000 61.468 109 42 0 12 120 32 140 1.83e-41 144
MS.gene051814.t1 AT3G30210 58.407 113 47 0 11 123 26 138 2.27e-41 145
MS.gene051814.t1 AT1G68320 59.091 110 45 0 10 119 17 126 2.98e-41 145
MS.gene051814.t1 AT5G40350 60.000 105 42 0 12 116 17 121 3.71e-41 142
MS.gene051814.t1 AT1G66390 68.519 108 34 0 8 115 4 111 4.34e-41 143
MS.gene051814.t1 AT3G08500 60.550 109 43 0 9 117 27 135 4.82e-41 145
MS.gene051814.t1 AT2G32460 57.944 107 45 0 11 117 17 123 1.14e-40 148
MS.gene051814.t1 AT2G32460 57.944 107 45 0 11 117 5 111 1.21e-40 147
MS.gene051814.t1 AT5G55020 58.879 107 44 0 12 118 26 132 1.36e-40 148
MS.gene051814.t1 AT1G79180 45.946 148 47 1 2 116 4 151 1.35e-39 141
MS.gene051814.t1 AT1G25340 52.846 123 55 1 14 136 20 139 2.30e-39 140
MS.gene051814.t1 AT3G11440 56.604 106 46 0 12 117 41 146 3.63e-39 143
MS.gene051814.t1 AT5G06100 56.075 107 47 0 11 117 31 137 5.14e-39 142
MS.gene051814.t1 AT5G14750 63.810 105 31 3 40 144 13 110 1.23e-38 134
MS.gene051814.t1 AT4G26930 48.819 127 61 1 12 138 19 141 1.82e-38 140
MS.gene051814.t1 AT3G11440 56.604 106 46 0 12 117 41 146 2.21e-38 142
MS.gene051814.t1 AT3G11440 56.604 106 46 0 12 117 41 146 2.21e-38 142
MS.gene051814.t1 AT3G11440 56.604 106 46 0 12 117 41 146 2.21e-38 142
MS.gene051814.t1 AT5G06100 56.075 107 47 0 11 117 31 137 2.72e-38 142
MS.gene051814.t1 AT5G06100 56.075 107 47 0 11 117 31 137 2.72e-38 142
MS.gene051814.t1 AT5G06100 56.075 107 47 0 11 117 31 137 2.72e-38 142
MS.gene051814.t1 AT5G06100 56.075 107 47 0 11 117 31 137 2.72e-38 142
MS.gene051814.t1 AT3G06490 61.468 109 42 0 12 120 19 127 2.35e-37 135
MS.gene051814.t1 AT2G26960 54.717 106 48 0 9 114 17 122 1.63e-36 135
MS.gene051814.t1 AT3G46130 53.636 110 51 0 9 118 6 115 3.06e-36 131
MS.gene051814.t1 AT5G49620 59.633 109 44 0 12 120 26 134 4.11e-36 132
MS.gene051814.t1 AT3G48920 50.427 117 58 0 8 124 14 130 6.90e-36 130
MS.gene051814.t1 AT5G59780 52.252 111 53 0 8 118 4 114 9.80e-36 129
MS.gene051814.t1 AT3G53200 57.009 107 46 0 9 115 6 112 1.55e-35 128
MS.gene051814.t1 AT4G25560 54.902 102 46 0 14 115 12 113 8.97e-35 127
MS.gene051814.t1 AT1G25340 50.407 123 53 2 14 136 20 134 1.93e-34 127
MS.gene051814.t1 AT1G25340 50.407 123 53 2 14 136 20 134 3.64e-34 127
MS.gene051814.t1 AT5G26660 73.333 75 20 0 43 117 12 86 5.94e-34 126
MS.gene051814.t1 AT5G52260 50.000 122 61 0 1 122 1 122 9.71e-33 122
MS.gene051814.t1 AT5G49620 52.846 123 44 1 12 120 26 148 1.73e-32 122
MS.gene051814.t1 AT2G26950 45.714 105 57 0 6 110 10 114 5.85e-31 120
MS.gene051814.t1 AT3G27810 60.976 82 32 0 45 126 4 85 2.59e-30 113
MS.gene051814.t1 AT3G47600 68.000 75 24 0 45 119 39 113 1.25e-29 115
MS.gene051814.t1 AT5G40350 65.278 72 25 0 45 116 5 76 9.59e-29 108
MS.gene051814.t1 AT3G53200 67.123 73 24 0 43 115 7 79 1.26e-28 109
MS.gene051814.t1 AT3G12820 68.116 69 22 0 48 116 2 70 1.58e-28 108
MS.gene051814.t1 AT5G14750 60.920 87 30 2 58 144 1 83 2.24e-28 107
MS.gene051814.t1 AT5G14750 60.920 87 30 2 58 144 1 83 2.24e-28 107
MS.gene051814.t1 AT1G66380 79.167 72 15 0 44 115 7 78 2.54e-28 105
MS.gene051814.t1 AT3G60460 47.573 103 53 1 9 110 8 110 3.47e-28 110
MS.gene051814.t1 AT5G59780 60.000 85 32 1 34 118 11 93 7.35e-28 107
MS.gene051814.t1 AT3G46130 52.632 95 41 1 24 118 3 93 2.98e-27 107
MS.gene051814.t1 AT3G46130 61.333 75 29 0 44 118 9 83 6.66e-27 105
MS.gene051814.t1 AT3G27785 49.020 102 51 1 9 110 184 284 1.49e-26 108
MS.gene051814.t1 AT1G66380 63.529 85 31 0 8 92 4 88 1.98e-26 100
MS.gene051814.t1 AT3G23250 54.651 86 31 1 58 143 1 78 9.66e-26 102
MS.gene051814.t1 AT1G22640 72.881 59 16 0 58 116 1 59 1.05e-25 101
MS.gene051814.t1 AT4G18770 42.623 122 66 2 9 130 212 329 1.08e-25 106
MS.gene051814.t1 AT5G40360 39.024 123 73 2 9 131 153 273 1.35e-25 105
MS.gene051814.t1 AT1G71030 60.000 75 30 0 51 125 5 79 3.95e-25 99.8
MS.gene051814.t1 AT1G71030 60.000 75 30 0 51 125 19 93 4.98e-25 99.8
MS.gene051814.t1 AT2G39880 50.000 102 50 1 14 115 50 150 1.00e-24 102
MS.gene051814.t1 AT1G69560 36.429 140 85 2 8 147 117 252 1.17e-24 102
MS.gene051814.t1 AT1G69560 36.429 140 85 2 8 147 101 236 1.17e-24 102
MS.gene051814.t1 AT3G55730 40.299 134 73 2 14 141 56 188 5.84e-24 100
MS.gene051814.t1 AT5G58850 47.475 99 51 1 12 110 103 200 6.29e-24 101
MS.gene051814.t1 AT1G26780 32.579 221 125 7 12 217 96 307 1.10e-23 99.8
MS.gene051814.t1 AT1G26780 39.231 130 70 3 12 141 96 216 1.68e-23 97.8
MS.gene051814.t1 AT3G09230 42.857 112 55 2 14 121 55 161 2.07e-23 99.4
MS.gene051814.t1 AT5G11050 47.423 97 50 1 14 110 105 200 4.75e-23 98.6
MS.gene051814.t1 AT5G02320 43.396 106 59 1 12 117 125 229 2.72e-22 97.4
MS.gene051814.t1 AT5G02320 43.396 106 59 1 12 117 125 229 2.72e-22 97.4
MS.gene051814.t1 AT1G18960 41.176 119 63 4 1 119 1 112 4.62e-22 94.4
MS.gene051814.t1 AT5G02320 43.396 106 59 1 12 117 65 169 5.87e-22 96.3
MS.gene051814.t1 AT2G23290 44.118 102 56 1 14 115 13 113 8.60e-22 93.6
MS.gene051814.t1 AT2G25230 42.056 107 61 1 4 110 16 121 1.34e-21 91.7
MS.gene051814.t1 AT5G17800 39.167 120 67 2 8 122 82 200 1.64e-21 93.2
MS.gene051814.t1 AT3G09370 43.519 108 52 2 12 115 133 235 1.92e-21 94.7
MS.gene051814.t1 AT4G37260 44.118 102 56 1 14 115 13 113 1.92e-21 92.8
MS.gene051814.t1 AT3G09370 43.519 108 52 2 12 115 128 230 1.98e-21 94.7
MS.gene051814.t1 AT1G17950 40.000 105 62 1 14 118 5 108 2.26e-21 91.3
MS.gene051814.t1 AT3G09370 43.519 108 52 2 12 115 141 243 2.42e-21 94.4
MS.gene051814.t1 AT5G11510 40.952 105 61 1 12 116 79 182 2.57e-21 94.7
MS.gene051814.t1 AT5G11510 40.952 105 61 1 12 116 79 182 2.57e-21 94.7
MS.gene051814.t1 AT5G11510 40.952 105 61 1 12 116 79 182 2.57e-21 94.7
MS.gene051814.t1 AT5G11510 40.952 105 61 1 12 116 79 182 3.44e-21 94.4
MS.gene051814.t1 AT5G11510 40.952 105 61 1 12 116 79 182 3.66e-21 94.4
MS.gene051814.t1 AT1G73410 42.857 105 57 2 14 117 6 108 1.61e-20 89.0
MS.gene051814.t1 AT3G29020 38.095 105 64 1 14 118 65 168 1.65e-20 88.6
MS.gene051814.t1 AT3G29020 38.095 105 64 1 13 117 66 169 1.75e-20 90.1
MS.gene051814.t1 AT4G32730 40.000 105 62 1 12 116 85 188 1.80e-20 92.4
MS.gene051814.t1 AT4G32730 40.000 105 62 1 12 116 85 188 1.80e-20 92.4
MS.gene051814.t1 AT4G32730 40.000 105 62 1 12 116 85 188 1.80e-20 92.4
MS.gene051814.t1 AT4G32730 40.000 105 62 1 12 116 85 188 1.80e-20 92.4
MS.gene051814.t1 AT4G32730 40.000 105 62 1 12 116 85 188 2.19e-20 92.0
MS.gene051814.t1 AT1G73410 42.453 106 58 2 13 117 5 108 5.06e-20 86.7
MS.gene051814.t1 AT5G67300 38.596 114 69 1 14 127 6 118 1.36e-19 87.4
MS.gene051814.t1 AT4G33450 36.207 116 68 2 3 118 13 122 3.11e-19 85.5
MS.gene051814.t1 AT3G50060 40.196 102 60 1 14 115 6 106 5.84e-19 85.9
MS.gene051814.t1 AT2G37630 36.607 112 69 1 14 123 4 115 2.99e-18 84.3
MS.gene051814.t1 AT4G00540 38.739 111 64 2 12 119 101 210 1.83e-17 82.4
MS.gene051814.t1 AT4G00540 38.739 111 64 2 12 119 99 208 3.47e-17 82.0
MS.gene051814.t1 AT5G40430 37.383 107 65 2 4 110 44 148 3.61e-17 80.1
MS.gene051814.t1 AT1G14350 37.255 102 63 1 16 117 27 127 3.53e-16 79.0
MS.gene051814.t1 AT1G14350 37.255 102 63 1 16 117 27 127 3.53e-16 79.0
MS.gene051814.t1 AT5G39700 35.922 103 65 1 15 117 57 158 4.05e-16 75.5
MS.gene051814.t1 AT2G02820 37.255 102 63 1 16 117 32 132 8.55e-16 77.8
MS.gene051814.t1 AT2G02820 37.255 102 63 1 16 117 32 132 9.22e-16 77.8
MS.gene051814.t1 AT2G02820 37.255 102 63 1 16 117 32 132 9.90e-16 77.0
MS.gene051814.t1 AT4G01060 62.500 40 15 0 69 108 34 73 2.45e-13 64.7
MS.gene051814.t1 AT4G01060 62.500 40 15 0 69 108 31 70 2.61e-13 64.7
MS.gene051814.t1 AT4G25560 63.043 46 17 0 70 115 2 47 4.49e-13 67.8
MS.gene051814.t1 AT5G59780 57.143 49 21 0 70 118 1 49 1.32e-12 65.5
MS.gene051814.t1 AT3G46130 57.143 49 21 0 70 118 1 49 1.48e-12 65.9
MS.gene051814.t1 AT5G53200 46.154 65 34 1 69 133 32 95 1.88e-12 63.2
MS.gene051814.t1 AT4G01060 62.500 40 15 0 69 108 32 71 2.75e-12 62.0
MS.gene051814.t1 AT1G74650 61.702 47 18 0 77 123 1 47 1.03e-11 64.3
MS.gene051814.t1 AT2G46410 64.103 39 14 0 70 108 38 76 1.89e-11 60.1
MS.gene051814.t1 AT3G28910 60.000 45 18 0 77 121 1 45 2.45e-11 63.2
MS.gene051814.t1 AT1G01380 58.974 39 16 0 70 108 34 72 6.87e-11 58.2

Find 50 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATTGGAACACGAATTT+AGG 0.196974 8.2:+7199088 MS.gene051814:CDS
AATTAATGAACCTGCTCTTT+TGG 0.204304 8.2:-7198592 None:intergenic
CGGATGAGATTCTCAAGAAT+TGG 0.303221 8.2:+7199578 MS.gene051814:CDS
ACAATGAAATCAAGAATTAT+TGG 0.309694 8.2:+7199074 MS.gene051814:CDS
TTCTGCATTGTTGATGAGTT+AGG 0.310840 8.2:-7199274 None:intergenic
ATTCATTACCATTCTCCATT+TGG 0.340725 8.2:-7199381 None:intergenic
GAGTTTGGCACCGTTGGTTT+AGG 0.340733 8.2:-7199193 None:intergenic
AGCTCCATGGTGAAGGAAAA+TGG 0.341987 8.2:+7198559 MS.gene051814:CDS
GTGAAATAATGAAGGTTGTT+AGG 0.357974 8.2:-7199634 None:intergenic
AGAACTATCCACAGATTTGC+TGG 0.360737 8.2:+7199429 MS.gene051814:CDS
GTACGAACAACATGTGAGTT+TGG 0.378479 8.2:-7199208 None:intergenic
ATGTTGCCTCTCTTAATATC+TGG 0.404068 8.2:-7198812 None:intergenic
TTCACAAACTACTTGGAAAC+AGG 0.414704 8.2:+7198867 MS.gene051814:CDS
AAAGGCTATCAAGTGCTCTA+AGG 0.425345 8.2:+7199231 MS.gene051814:CDS
TCTGCATTGTTGATGAGTTA+GGG 0.428578 8.2:-7199273 None:intergenic
CTAATAGCCGGAAGACTACC+AGG 0.448475 8.2:+7199043 MS.gene051814:CDS
ATCCGACTTCACAAACTACT+TGG 0.462485 8.2:+7198860 MS.gene051814:CDS
TGTTCGCCCTGGTAGTCTTC+CGG 0.464681 8.2:-7199050 None:intergenic
TTCAATGAGTAACAACCAAA+TGG 0.478517 8.2:+7199366 MS.gene051814:CDS
TTCTCCTAGTACATCCTCAC+TGG 0.484438 8.2:-7199671 None:intergenic
CCACCATCAACATGCATTGG+TGG 0.496315 8.2:-7199334 None:intergenic
TTCCAAGTAGTTTGTGAAGT+CGG 0.507548 8.2:-7198862 None:intergenic
CATCCGAAAACATAGGAGTC+TGG 0.511553 8.2:-7199561 None:intergenic
GCAAAGGAGGGCTTGAATAG+AGG 0.520112 8.2:+7198492 MS.gene051814:CDS
ACATGTGAGTTTGGCACCGT+TGG 0.530375 8.2:-7199199 None:intergenic
AGTAACAACCAAATGGAGAA+TGG 0.531482 8.2:+7199373 MS.gene051814:CDS
GGTAGATGGTCTCTAATAGC+CGG 0.535801 8.2:+7199031 MS.gene051814:intron
ATTTCATTGTCTGTTCGCCC+TGG 0.537868 8.2:-7199061 None:intergenic
GAAAAGAAGTGAAATAATGA+AGG 0.542726 8.2:-7199642 None:intergenic
TACGTTAAGCTCCATGGTGA+AGG 0.542958 8.2:+7198552 MS.gene051814:CDS
AAGTCCTTGTTGTGCAAAGG+AGG 0.543543 8.2:+7198479 MS.gene051814:CDS
AAGCCACCAATGCATGTTGA+TGG 0.544750 8.2:+7199331 MS.gene051814:CDS
AGGGCTTGAATAGAGGTGCT+TGG 0.550771 8.2:+7198499 MS.gene051814:CDS
TCAGATTACGTTAAGCTCCA+TGG 0.555400 8.2:+7198546 MS.gene051814:CDS
AGAATCTCATCCGAAAACAT+AGG 0.560090 8.2:-7199568 None:intergenic
AAGCCCTCCTTTGCACAACA+AGG 0.570948 8.2:-7198483 None:intergenic
GAATCCAGTGAGGATGTACT+AGG 0.577432 8.2:+7199667 MS.gene051814:CDS
AGAAACCTTCCCAAAAGAGC+AGG 0.579750 8.2:+7198582 MS.gene051814:CDS
CTCACATGTTGTTCGTACAA+AGG 0.580746 8.2:+7199213 MS.gene051814:CDS
TCACCACCATCAACATGCAT+TGG 0.589567 8.2:-7199337 None:intergenic
AGTCCTTGTTGTGCAAAGGA+GGG 0.595377 8.2:+7198480 MS.gene051814:CDS
GAGAAGTCCTTGTTGTGCAA+AGG 0.595751 8.2:+7198476 MS.gene051814:CDS
GATAAGATCTTCTTCATCTG+AGG 0.596454 8.2:-7198837 None:intergenic
AAAATCAACCAGCAAATCTG+TGG 0.611405 8.2:-7199437 None:intergenic
CTAAGACCAGATATTAAGAG+AGG 0.629665 8.2:+7198806 MS.gene051814:CDS
ATAGGAGTCTGGTCAGAACA+AGG 0.647339 8.2:-7199550 None:intergenic
CATGCAGGTTTAAGAAGATG+TGG 0.648090 8.2:+7198752 MS.gene051814:intron
ACAAAACAATCCTAAACCAA+CGG 0.655150 8.2:+7199183 MS.gene051814:CDS
CCACCAATGCATGTTGATGG+TGG 0.679297 8.2:+7199334 MS.gene051814:CDS
TAATAGCCGGAAGACTACCA+GGG 0.716144 8.2:+7199044 MS.gene051814:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTCTTCAAAATAATT+AGG - chr8.2:7198987-7199006 None:intergenic 10.0%
!!! ATATTAATTTACTTTTCTCA+TGG - chr8.2:7198696-7198715 None:intergenic 15.0%
!!! TAATGAATTTTTGTCATTTT+CGG + chr8.2:7199396-7199415 MS.gene051814:CDS 15.0%
!! ACAATGAAATCAAGAATTAT+TGG + chr8.2:7199074-7199093 MS.gene051814:CDS 20.0%
! AATTATTGGAACACGAATTT+AGG + chr8.2:7199088-7199107 MS.gene051814:CDS 25.0%
! GAAAAGAAGTGAAATAATGA+AGG - chr8.2:7199645-7199664 None:intergenic 25.0%
ACAAAACAATCCTAAACCAA+CGG + chr8.2:7199183-7199202 MS.gene051814:CDS 30.0%
ACCATCTACCAAAAAATTCA+AGG - chr8.2:7199021-7199040 None:intergenic 30.0%
ATTCATTACCATTCTCCATT+TGG - chr8.2:7199384-7199403 None:intergenic 30.0%
GAAAAAGTTGTAGACTTAGA+TGG + chr8.2:7198774-7198793 MS.gene051814:CDS 30.0%
GAACACGAATTTAGGAAAAA+AGG + chr8.2:7199096-7199115 MS.gene051814:CDS 30.0%
GTGAAATAATGAAGGTTGTT+AGG - chr8.2:7199637-7199656 None:intergenic 30.0%
TTCAATGAGTAACAACCAAA+TGG + chr8.2:7199366-7199385 MS.gene051814:CDS 30.0%
! AATTAATGAACCTGCTCTTT+TGG - chr8.2:7198595-7198614 None:intergenic 30.0%
! ATTAATGAACCTGCTCTTTT+GGG - chr8.2:7198594-7198613 None:intergenic 30.0%
! CATCAATGAACACTTTTGTT+TGG + chr8.2:7198635-7198654 MS.gene051814:intron 30.0%
!! AACTGTTAGTGTTTTGTTGT+TGG - chr8.2:7199132-7199151 None:intergenic 30.0%
!!! AAGTTCTGCCTTGAATTTTT+TGG + chr8.2:7199010-7199029 MS.gene051814:intron 30.0%
!!! TGTGTGATCTTTGCATTTTT+TGG - chr8.2:7199160-7199179 None:intergenic 30.0%
AAAATCAACCAGCAAATCTG+TGG - chr8.2:7199440-7199459 None:intergenic 35.0%
AGAATCTCATCCGAAAACAT+AGG - chr8.2:7199571-7199590 None:intergenic 35.0%
AGTAACAACCAAATGGAGAA+TGG + chr8.2:7199373-7199392 MS.gene051814:CDS 35.0%
ATGTTGCCTCTCTTAATATC+TGG - chr8.2:7198815-7198834 None:intergenic 35.0%
CTAAGACCAGATATTAAGAG+AGG + chr8.2:7198806-7198825 MS.gene051814:CDS 35.0%
GATAAGATCTTCTTCATCTG+AGG - chr8.2:7198840-7198859 None:intergenic 35.0%
TAAATATGTGTATGCCATGC+AGG + chr8.2:7198737-7198756 MS.gene051814:intron 35.0%
TTCACAAACTACTTGGAAAC+AGG + chr8.2:7198867-7198886 MS.gene051814:CDS 35.0%
! TCTGCATTGTTGATGAGTTA+GGG - chr8.2:7199276-7199295 None:intergenic 35.0%
! TTCCAAGTAGTTTGTGAAGT+CGG - chr8.2:7198865-7198884 None:intergenic 35.0%
! TTCTGCATTGTTGATGAGTT+AGG - chr8.2:7199277-7199296 None:intergenic 35.0%
!! GCTGGTTGATTTTAACATGA+GGG + chr8.2:7199447-7199466 MS.gene051814:CDS 35.0%
!! TGCTGGTTGATTTTAACATG+AGG + chr8.2:7199446-7199465 MS.gene051814:CDS 35.0%
!!! GCCTTGAATTTTTTGGTAGA+TGG + chr8.2:7199017-7199036 MS.gene051814:intron 35.0%
AAAGGCTATCAAGTGCTCTA+AGG + chr8.2:7199231-7199250 MS.gene051814:CDS 40.0%
AGAACTATCCACAGATTTGC+TGG + chr8.2:7199429-7199448 MS.gene051814:CDS 40.0%
ATCCGACTTCACAAACTACT+TGG + chr8.2:7198860-7198879 MS.gene051814:CDS 40.0%
CACATCTTCTTAAACCTGCA+TGG - chr8.2:7198754-7198773 None:intergenic 40.0%
CATGCAGGTTTAAGAAGATG+TGG + chr8.2:7198752-7198771 MS.gene051814:intron 40.0%
CGGATGAGATTCTCAAGAAT+TGG + chr8.2:7199578-7199597 MS.gene051814:CDS 40.0%
CTCACATGTTGTTCGTACAA+AGG + chr8.2:7199213-7199232 MS.gene051814:CDS 40.0%
GTACGAACAACATGTGAGTT+TGG - chr8.2:7199211-7199230 None:intergenic 40.0%
TCAGATTACGTTAAGCTCCA+TGG + chr8.2:7198546-7198565 MS.gene051814:CDS 40.0%
! TGACCAGACTCCTATGTTTT+CGG + chr8.2:7199558-7199577 MS.gene051814:CDS 40.0%
! TTCTCCATTTTCCTTCACCA+TGG - chr8.2:7198566-7198585 None:intergenic 40.0%
! TTCTTTTCTCGAATCCAGTG+AGG + chr8.2:7199657-7199676 MS.gene051814:CDS 40.0%
AAGCCACCAATGCATGTTGA+TGG + chr8.2:7199331-7199350 MS.gene051814:CDS 45.0%
AGAAACCTTCCCAAAAGAGC+AGG + chr8.2:7198582-7198601 MS.gene051814:CDS 45.0%
AGCTCCATGGTGAAGGAAAA+TGG + chr8.2:7198559-7198578 MS.gene051814:CDS 45.0%
ATAGGAGTCTGGTCAGAACA+AGG - chr8.2:7199553-7199572 None:intergenic 45.0%
ATTTCATTGTCTGTTCGCCC+TGG - chr8.2:7199064-7199083 None:intergenic 45.0%
CATCCGAAAACATAGGAGTC+TGG - chr8.2:7199564-7199583 None:intergenic 45.0%
GAATCCAGTGAGGATGTACT+AGG + chr8.2:7199667-7199686 MS.gene051814:CDS 45.0%
GGTAGATGGTCTCTAATAGC+CGG + chr8.2:7199031-7199050 MS.gene051814:intron 45.0%
TAATAGCCGGAAGACTACCA+GGG + chr8.2:7199044-7199063 MS.gene051814:CDS 45.0%
TACGTTAAGCTCCATGGTGA+AGG + chr8.2:7198552-7198571 MS.gene051814:CDS 45.0%
TCACCACCATCAACATGCAT+TGG - chr8.2:7199340-7199359 None:intergenic 45.0%
TTCTCCTAGTACATCCTCAC+TGG - chr8.2:7199674-7199693 None:intergenic 45.0%
! AAGTCCTTGTTGTGCAAAGG+AGG + chr8.2:7198479-7198498 MS.gene051814:CDS 45.0%
! AGTCCTTGTTGTGCAAAGGA+GGG + chr8.2:7198480-7198499 MS.gene051814:CDS 45.0%
! GAGAAGTCCTTGTTGTGCAA+AGG + chr8.2:7198476-7198495 MS.gene051814:CDS 45.0%
!! ATGAACCTGCTCTTTTGGGA+AGG - chr8.2:7198590-7198609 None:intergenic 45.0%
!! AGTAAATTAATATATTATTA+TGG + chr8.2:7198703-7198722 MS.gene051814:intron 5.0%
AAGCCCTCCTTTGCACAACA+AGG - chr8.2:7198486-7198505 None:intergenic 50.0%
ACATGTGAGTTTGGCACCGT+TGG - chr8.2:7199202-7199221 None:intergenic 50.0%
CCACCATCAACATGCATTGG+TGG - chr8.2:7199337-7199356 None:intergenic 50.0%
CTAATAGCCGGAAGACTACC+AGG + chr8.2:7199043-7199062 MS.gene051814:CDS 50.0%
GCAAAGGAGGGCTTGAATAG+AGG + chr8.2:7198492-7198511 MS.gene051814:CDS 50.0%
! CCACCAATGCATGTTGATGG+TGG + chr8.2:7199334-7199353 MS.gene051814:CDS 50.0%
!! AGGGCTTGAATAGAGGTGCT+TGG + chr8.2:7198499-7198518 MS.gene051814:CDS 50.0%
!! GAGTTTGGCACCGTTGGTTT+AGG - chr8.2:7199196-7199215 None:intergenic 50.0%
TGTTCGCCCTGGTAGTCTTC+CGG - chr8.2:7199053-7199072 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 7198471 7199696 7198471 ID=MS.gene051814
chr8.2 mRNA 7198471 7199696 7198471 ID=MS.gene051814.t1;Parent=MS.gene051814
chr8.2 exon 7198471 7198603 7198471 ID=MS.gene051814.t1.exon1;Parent=MS.gene051814.t1
chr8.2 CDS 7198471 7198603 7198471 ID=cds.MS.gene051814.t1;Parent=MS.gene051814.t1
chr8.2 exon 7198759 7198888 7198759 ID=MS.gene051814.t1.exon2;Parent=MS.gene051814.t1
chr8.2 CDS 7198759 7198888 7198759 ID=cds.MS.gene051814.t1;Parent=MS.gene051814.t1
chr8.2 exon 7199036 7199696 7199036 ID=MS.gene051814.t1.exon3;Parent=MS.gene051814.t1
chr8.2 CDS 7199036 7199696 7199036 ID=cds.MS.gene051814.t1;Parent=MS.gene051814.t1
Gene Sequence

>MS.gene051814

ATGGGGAGAAGTCCTTGTTGTGCAAAGGAGGGCTTGAATAGAGGTGCTTGGACAGCTCATGAAGACAAAATTCTCTCAGATTACGTTAAGCTCCATGGTGAAGGAAAATGGAGAAACCTTCCCAAAAGAGCAGGTTCATTAATTATGTATCTTCTTATATAGATCATCAATGAACACTTTTGTTTGGTTATATTTTTTCATGTTTTTGTTTTATTTCATTTTCCATGAGAAAAGTAAATTAATATATTATTATGGTCATGTTTTTGTAAATATGTGTATGCCATGCAGGTTTAAGAAGATGTGGAAAAAGTTGTAGACTTAGATGGTTAAATTATCTAAGACCAGATATTAAGAGAGGCAACATATCCTCAGATGAAGAAGATCTTATCATCCGACTTCACAAACTACTTGGAAACAGGTAACATACTAACATGATCACTAACTTACTAACATTTGATTGTCATAAAAAAAGTGATTACTAATACTACTAGTTTAATTAATATTGTACATGATCCTAATTATTTTGAAGAATTTATGCTAAGTTCTGCCTTGAATTTTTTGGTAGATGGTCTCTAATAGCCGGAAGACTACCAGGGCGAACAGACAATGAAATCAAGAATTATTGGAACACGAATTTAGGAAAAAAGGTTAAAGATCTCCAACAACAAAACACTAACAGTTCTTCTCCAAAAAATGCAAAGATCACACAGAAACAAAACAATCCTAAACCAACGGTGCCAAACTCACATGTTGTTCGTACAAAGGCTATCAAGTGCTCTAAGGTATTATTCATAAACTCACTCCCTAACTCATCAACAATGCAGAATTTGCAGAACAAAGTTGAGACAGAGACAAAAACAAAGCCACCAATGCATGTTGATGGTGGTGATAGTGATTCAATGAGTAACAACCAAATGGAGAATGGTAATGAATTTTTGTCATTTTCGGATGCGAAAAAAGAACTATCCACAGATTTGCTGGTTGATTTTAACATGAGGGATCATGATATTAGCTTATCTGAACTTCTCAACTCAGATTTTTCAACTGCATGCAATTTTGATTACAATGAGCTATTGTCACCTTGTTCTGACCAGACTCCTATGTTTTCGGATGAGATTCTCAAGAATTGGACAGAATGTAGCTTTGCTGATGAGAAAAATGTACCTAACAACCTTCATTATTTCACTTCTTTTCTCGAATCCAGTGAGGATGTACTAGGAGAATGA
Protein sequence

>MS.gene051814.t1

MGRSPCCAKEGLNRGAWTAHEDKILSDYVKLHGEGKWRNLPKRAGLRRCGKSCRLRWLNYLRPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDLQQQNTNSSSPKNAKITQKQNNPKPTVPNSHVVRTKAIKCSKVLFINSLPNSSTMQNLQNKVETETKTKPPMHVDGGDSDSMSNNQMENGNEFLSFSDAKKELSTDLLVDFNMRDHDISLSELLNSDFSTACNFDYNELLSPCSDQTPMFSDEILKNWTECSFADEKNVPNNLHYFTSFLESSEDVLGE