Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051994.t1 | RHN72439.1 | 41.2 | 677 | 177 | 2 | 145 | 600 | 58 | 734 | 9.70E-140 | 508.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051994.t1 | Q9SZL8 | 37.2 | 183 | 111 | 4 | 166 | 346 | 77 | 257 | 1.3e-20 | 103.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051994.t1 | A0A396J342 | 41.2 | 677 | 177 | 2 | 145 | 600 | 58 | 734 | 7.0e-140 | 508.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene051994.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051994.t1 | MTR_7g028855 | 69.935 | 306 | 48 | 5 | 1 | 305 | 1 | 263 | 1.75e-132 | 408 |
MS.gene051994.t1 | MTR_7g446520 | 67.568 | 296 | 43 | 3 | 54 | 349 | 15 | 257 | 1.02e-126 | 388 |
MS.gene051994.t1 | MTR_7g446480 | 55.587 | 349 | 56 | 6 | 1 | 349 | 1 | 250 | 1.79e-107 | 337 |
MS.gene051994.t1 | MTR_7g446510 | 86.486 | 111 | 15 | 0 | 239 | 349 | 155 | 265 | 6.40e-59 | 206 |
MS.gene051994.t1 | MTR_7g446510 | 56.024 | 166 | 42 | 3 | 358 | 523 | 23 | 157 | 1.39e-43 | 162 |
MS.gene051994.t1 | MTR_1g070355 | 36.000 | 200 | 125 | 2 | 164 | 362 | 76 | 273 | 2.46e-31 | 130 |
MS.gene051994.t1 | MTR_5g076070 | 32.821 | 195 | 131 | 0 | 130 | 324 | 21 | 215 | 1.25e-29 | 120 |
MS.gene051994.t1 | MTR_6g022080 | 26.163 | 172 | 127 | 0 | 153 | 324 | 76 | 247 | 3.47e-19 | 88.6 |
MS.gene051994.t1 | MTR_8g467420 | 45.783 | 83 | 44 | 1 | 145 | 226 | 61 | 143 | 2.27e-18 | 84.0 |
MS.gene051994.t1 | MTR_8g468460 | 46.939 | 98 | 50 | 2 | 361 | 457 | 9 | 105 | 1.10e-17 | 80.1 |
MS.gene051994.t1 | MTR_0645s0010 | 38.739 | 111 | 68 | 0 | 334 | 444 | 15 | 125 | 1.55e-17 | 80.1 |
MS.gene051994.t1 | MTR_6g051425 | 28.856 | 201 | 138 | 4 | 170 | 366 | 25 | 224 | 3.83e-17 | 84.3 |
MS.gene051994.t1 | MTR_0402s0040 | 33.708 | 178 | 106 | 4 | 166 | 338 | 30 | 200 | 9.43e-17 | 85.1 |
MS.gene051994.t1 | MTR_3g448650 | 41.176 | 85 | 50 | 0 | 153 | 237 | 73 | 157 | 6.07e-14 | 71.6 |
MS.gene051994.t1 | MTR_2g098880 | 40.367 | 109 | 63 | 2 | 156 | 263 | 55 | 162 | 3.68e-13 | 70.9 |
MS.gene051994.t1 | MTR_0060s0090 | 37.500 | 80 | 50 | 0 | 165 | 244 | 59 | 138 | 4.28e-13 | 68.6 |
MS.gene051994.t1 | MTR_2g098880 | 40.367 | 109 | 63 | 2 | 156 | 263 | 67 | 174 | 5.03e-13 | 70.9 |
MS.gene051994.t1 | MTR_1g008290 | 33.607 | 122 | 76 | 2 | 222 | 343 | 10 | 126 | 7.22e-13 | 67.4 |
MS.gene051994.t1 | MTR_2g101460 | 37.838 | 111 | 69 | 0 | 153 | 263 | 36 | 146 | 1.01e-12 | 68.6 |
MS.gene051994.t1 | MTR_2g101460 | 37.838 | 111 | 69 | 0 | 153 | 263 | 46 | 156 | 3.44e-12 | 67.4 |
MS.gene051994.t1 | MTR_6g053140 | 29.167 | 168 | 106 | 4 | 109 | 273 | 47 | 204 | 9.00e-12 | 66.2 |
MS.gene051994.t1 | MTR_3g080590 | 48.276 | 58 | 30 | 0 | 155 | 212 | 98 | 155 | 4.69e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051994.t1 | AT4G38180 | 37.158 | 183 | 111 | 4 | 166 | 346 | 77 | 257 | 1.14e-18 | 92.0 |
MS.gene051994.t1 | AT4G38180 | 28.856 | 201 | 135 | 5 | 345 | 542 | 483 | 678 | 2.30e-15 | 81.6 |
MS.gene051994.t1 | AT1G10240 | 30.500 | 200 | 133 | 4 | 168 | 362 | 54 | 252 | 1.48e-14 | 78.6 |
MS.gene051994.t1 | AT1G10240 | 30.500 | 200 | 133 | 4 | 168 | 362 | 54 | 252 | 1.48e-14 | 78.6 |
MS.gene051994.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 168 | 325 | 61 | 220 | 3.61e-13 | 73.9 |
MS.gene051994.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 168 | 325 | 61 | 220 | 3.81e-13 | 73.9 |
MS.gene051994.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 168 | 325 | 61 | 220 | 4.07e-13 | 73.9 |
MS.gene051994.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 168 | 325 | 61 | 220 | 4.30e-13 | 73.9 |
MS.gene051994.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 168 | 325 | 61 | 220 | 4.30e-13 | 73.9 |
MS.gene051994.t1 | AT4G15090 | 27.064 | 218 | 150 | 7 | 166 | 380 | 55 | 266 | 1.18e-12 | 72.8 |
MS.gene051994.t1 | AT4G15090 | 26.344 | 186 | 133 | 2 | 348 | 533 | 460 | 641 | 7.95e-12 | 70.1 |
MS.gene051994.t1 | AT4G15090 | 27.064 | 218 | 150 | 7 | 166 | 380 | 55 | 266 | 1.18e-12 | 72.8 |
MS.gene051994.t1 | AT4G15090 | 26.344 | 186 | 133 | 2 | 348 | 533 | 460 | 641 | 7.95e-12 | 70.1 |
MS.gene051994.t1 | AT4G15090 | 27.064 | 218 | 150 | 7 | 166 | 380 | 55 | 266 | 1.18e-12 | 72.8 |
MS.gene051994.t1 | AT4G15090 | 26.344 | 186 | 133 | 2 | 348 | 533 | 460 | 641 | 7.95e-12 | 70.1 |
MS.gene051994.t1 | AT4G15090 | 27.064 | 218 | 150 | 7 | 166 | 380 | 55 | 266 | 1.18e-12 | 72.8 |
MS.gene051994.t1 | AT4G15090 | 26.344 | 186 | 133 | 2 | 348 | 533 | 460 | 641 | 7.95e-12 | 70.1 |
MS.gene051994.t1 | AT4G15090 | 27.064 | 218 | 150 | 7 | 166 | 380 | 55 | 266 | 1.18e-12 | 72.8 |
MS.gene051994.t1 | AT4G15090 | 26.344 | 186 | 133 | 2 | 348 | 533 | 460 | 641 | 7.95e-12 | 70.1 |
MS.gene051994.t1 | AT4G38170 | 26.943 | 193 | 126 | 6 | 320 | 499 | 210 | 400 | 8.65e-12 | 69.3 |
MS.gene051994.t1 | AT3G22170 | 25.714 | 175 | 125 | 2 | 350 | 524 | 471 | 640 | 9.91e-12 | 69.7 |
MS.gene051994.t1 | AT3G22170 | 25.714 | 175 | 125 | 2 | 350 | 524 | 471 | 640 | 9.91e-12 | 69.7 |
MS.gene051994.t1 | AT3G07500 | 37.500 | 136 | 75 | 5 | 135 | 267 | 8 | 136 | 1.23e-11 | 65.9 |
MS.gene051994.t1 | AT2G27110 | 26.442 | 208 | 137 | 5 | 325 | 524 | 405 | 604 | 4.75e-11 | 67.4 |
MS.gene051994.t1 | AT2G27110 | 26.442 | 208 | 137 | 5 | 325 | 524 | 405 | 604 | 4.75e-11 | 67.4 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 454 | 559 | 5.46e-11 | 67.4 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 454 | 559 | 5.46e-11 | 67.4 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 454 | 559 | 7.56e-11 | 66.6 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 454 | 559 | 7.56e-11 | 66.6 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 397 | 502 | 7.92e-11 | 66.6 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 454 | 559 | 8.23e-11 | 66.6 |
MS.gene051994.t1 | AT4G19990 | 34.906 | 106 | 67 | 2 | 395 | 498 | 468 | 573 | 8.54e-11 | 66.6 |
Find 213 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAATGCCTTTACTGATTT+TGG | 0.059598 | 2.2:-3624188 | MS.gene051994:CDS |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 2.2:+3621153 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 2.2:+3621255 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 2.2:+3621561 | None:intergenic |
ATCCATCTCCCACGTCTTTC+TGG | 0.105489 | 2.2:+3621357 | None:intergenic |
ATCCATCTCCCACGTCTTTC+TGG | 0.105489 | 2.2:+3621459 | None:intergenic |
GCAAGCACTGAGCATCTTTC+TGG | 0.124164 | 2.2:-3621299 | MS.gene051994:CDS |
GCAAGCACTGAGCATCTTTC+TGG | 0.124164 | 2.2:-3621401 | MS.gene051994:CDS |
CCCACGTCTCTTTGGCTATC+AGG | 0.210671 | 2.2:+3621671 | None:intergenic |
AATAAGAACTTGTCATATAA+TGG | 0.247315 | 2.2:-3623316 | MS.gene051994:CDS |
CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 2.2:+3621569 | None:intergenic |
TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 2.2:-3623389 | MS.gene051994:CDS |
TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 2.2:-3623475 | MS.gene051994:CDS |
CCTGAAGTTCCAATTGTTAC+TGG | 0.294336 | 2.2:-3621869 | MS.gene051994:CDS |
ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 2.2:+3621663 | None:intergenic |
CTTGTTGCGTTGGACGAAAA+AGG | 0.298153 | 2.2:-3622074 | MS.gene051994:CDS |
ACTTAACATTCAGATAGTTT+AGG | 0.298701 | 2.2:+3623175 | None:intergenic |
CTTAACATTCAGATAGTTTA+GGG | 0.312093 | 2.2:+3623176 | None:intergenic |
TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 2.2:-3621951 | MS.gene051994:CDS |
AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 2.2:-3623966 | MS.gene051994:CDS |
CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 2.2:-3623731 | MS.gene051994:CDS |
ACATATCTTCCTCTTTGATT+TGG | 0.318417 | 2.2:+3621427 | None:intergenic |
TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 2.2:-3623724 | MS.gene051994:CDS |
CCAGTAACAATTGGAACTTC+AGG | 0.318979 | 2.2:+3621869 | None:intergenic |
ACATGTCTTCCTATTTGATT+TGG | 0.320451 | 2.2:+3621325 | None:intergenic |
AGACGTGGCAGAAGGATTAA+AGG | 0.327759 | 2.2:-3620862 | MS.gene051994:CDS |
CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 2.2:-3623638 | MS.gene051994:CDS |
CGCAACAAGATCAAACATTC+TGG | 0.354601 | 2.2:+3622088 | None:intergenic |
AAGAGTTATGTTAGGAAGAA+AGG | 0.363884 | 2.2:-3622508 | MS.gene051994:intron |
CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 2.2:+3623415 | None:intergenic |
TGCTCCAAAGAAGAATAAAA+AGG | 0.367722 | 2.2:-3621795 | MS.gene051994:CDS |
TGGCTAGCATGCTGAGACAT+TGG | 0.368552 | 2.2:+3621275 | None:intergenic |
TGGCTAGCATGCTGAGACAT+TGG | 0.368552 | 2.2:+3621377 | None:intergenic |
TGGCTAGCACTCTGAGACAT+AGG | 0.369422 | 2.2:+3620888 | None:intergenic |
ATTGTCCATTGCCGCGACTT+TGG | 0.380308 | 2.2:+3620477 | None:intergenic |
CAAAGGGAGCCAAATCAAAT+AGG | 0.380519 | 2.2:-3621334 | MS.gene051994:CDS |
CGCATGGTGAGGCACCTGTT+AGG | 0.385044 | 2.2:-3620613 | MS.gene051994:CDS |
GGAAGTAGATTCTAAGTTGA+TGG | 0.394286 | 2.2:-3622017 | MS.gene051994:CDS |
AGTCTCCTTGATGCCCTAAC+AGG | 0.395341 | 2.2:+3620599 | None:intergenic |
GTTGAGTTTCCAGTAACAAT+TGG | 0.399158 | 2.2:+3621860 | None:intergenic |
ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 2.2:-3623315 | MS.gene051994:CDS |
GGTACACCGGAACATGATTA+CGG | 0.407134 | 2.2:-3624167 | MS.gene051994:CDS |
AAACACATCCGATCGTTGTT+GGG | 0.408114 | 2.2:-3624118 | MS.gene051994:CDS |
AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 2.2:-3623548 | MS.gene051994:CDS |
CAAGCACTGAGCATCTTTCT+GGG | 0.411830 | 2.2:-3621298 | MS.gene051994:CDS |
CAAGCACTGAGCATCTTTCT+GGG | 0.411830 | 2.2:-3621400 | MS.gene051994:CDS |
TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 2.2:-3623666 | MS.gene051994:CDS |
GGATGACATACAAAAGCTTC+GGG | 0.433073 | 2.2:-3621906 | MS.gene051994:CDS |
GGAGCACCTTTGCACTTCAC+TGG | 0.435097 | 2.2:+3621812 | None:intergenic |
CAGTAACAATTGGAACTTCA+GGG | 0.439435 | 2.2:+3621870 | None:intergenic |
GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 2.2:-3623557 | MS.gene051994:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.445822 | 2.2:+3621071 | None:intergenic |
CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 2.2:-3622356 | MS.gene051994:CDS |
GGTACTTACTTTCATATTCA+CGG | 0.451954 | 2.2:+3620800 | None:intergenic |
GAAACACATCCGATCGTTGT+TGG | 0.452531 | 2.2:-3624119 | MS.gene051994:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.456227 | 2.2:+3620969 | None:intergenic |
ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 2.2:+3621001 | None:intergenic |
ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 2.2:+3621103 | None:intergenic |
GATTATAGTGATGGTGATAA+AGG | 0.463912 | 2.2:-3623942 | MS.gene051994:CDS |
TGGATGACATACAAAAGCTT+CGG | 0.464217 | 2.2:-3621907 | MS.gene051994:CDS |
GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 2.2:-3623295 | MS.gene051994:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 2.2:+3621173 | None:intergenic |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 2.2:+3621479 | None:intergenic |
TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 2.2:+3623489 | None:intergenic |
GATGAGCGATATGATGAAAC+TGG | 0.468588 | 2.2:-3623999 | MS.gene051994:CDS |
TTGATGGAGATTGCTCGATA+TGG | 0.468688 | 2.2:-3622001 | MS.gene051994:CDS |
TCTTGAATGTGGACTATTGT+GGG | 0.469444 | 2.2:-3622039 | MS.gene051994:CDS |
GTAGATAAAGCACAGATTGA+TGG | 0.475759 | 2.2:-3623354 | MS.gene051994:CDS |
TGATTACGGTTCTACGGATG+TGG | 0.481654 | 2.2:-3624153 | MS.gene051994:CDS |
AAGAATACTCAAGGGAATAC+AGG | 0.487856 | 2.2:-3624023 | MS.gene051994:CDS |
CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 2.2:+3622405 | None:intergenic |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 2.2:+3621172 | None:intergenic |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 2.2:+3621478 | None:intergenic |
TTCTTGAATGTGGACTATTG+TGG | 0.490201 | 2.2:-3622040 | MS.gene051994:CDS |
CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 2.2:+3622391 | None:intergenic |
GAAGATATTCAAGATGGGTC+GGG | 0.491290 | 2.2:-3620310 | MS.gene051994:CDS |
GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 2.2:+3624161 | None:intergenic |
TTGGCTAGCATGCTGAGACA+TGG | 0.494151 | 2.2:+3620968 | None:intergenic |
TTGGCTAGCATGCTGAGACA+TGG | 0.494151 | 2.2:+3621070 | None:intergenic |
AAGGGTGGATATCCCGGTGT+TGG | 0.494812 | 2.2:-3623276 | MS.gene051994:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 2.2:-3621147 | MS.gene051994:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 2.2:-3621249 | MS.gene051994:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 2.2:-3621657 | MS.gene051994:CDS |
AAGCTAAAGTAGGAAAGAAA+AGG | 0.496295 | 2.2:-3620646 | MS.gene051994:CDS |
AGGGTGGATATCCCGGTGTT+GGG | 0.498763 | 2.2:-3623275 | MS.gene051994:CDS |
TAGCTTGTATGCTGATGTGC+TGG | 0.499229 | 2.2:-3621927 | MS.gene051994:CDS |
CATCCGATCGTTGTTGGGAG+TGG | 0.501907 | 2.2:-3624113 | MS.gene051994:CDS |
GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 2.2:-3623586 | MS.gene051994:CDS |
GCATGGTGAGGCACCTGTTA+GGG | 0.503693 | 2.2:-3620612 | MS.gene051994:CDS |
TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 2.2:-3623766 | MS.gene051994:CDS |
GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 2.2:-3623777 | MS.gene051994:CDS |
CCTTTGCACTTCACTGGCAA+TGG | 0.506348 | 2.2:+3621818 | None:intergenic |
GACGTGGCAGAAGGATTAAA+GGG | 0.507003 | 2.2:-3620861 | MS.gene051994:CDS |
GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 2.2:-3622316 | MS.gene051994:CDS |
ATTCAAGATGGGTCGGGAAG+CGG | 0.513307 | 2.2:-3620304 | MS.gene051994:CDS |
GCTCAGAAGGGTGGATATCC+CGG | 0.515458 | 2.2:-3623282 | MS.gene051994:CDS |
GGAGTCCAAAGTCGCGGCAA+TGG | 0.517476 | 2.2:-3620482 | MS.gene051994:CDS |
ATTCATGAACAAGCTAAAGT+AGG | 0.517482 | 2.2:-3620656 | MS.gene051994:CDS |
ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 2.2:-3623738 | MS.gene051994:CDS |
GAAGAAAATGATAATGTGTC+AGG | 0.520481 | 2.2:-3620451 | MS.gene051994:CDS |
GTGTAGGAAGATATTCAAGA+TGG | 0.521547 | 2.2:-3620316 | MS.gene051994:intron |
GACGTGGGAGGAGGATCAAA+GGG | 0.523575 | 2.2:-3620942 | MS.gene051994:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 2.2:-3621656 | MS.gene051994:CDS |
TAGGGCATCAAGGAGACTAA+TGG | 0.526483 | 2.2:-3620594 | MS.gene051994:CDS |
ATCACATTCACAGTAGGTTC+AGG | 0.528477 | 2.2:+3620280 | None:intergenic |
CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 2.2:+3624181 | None:intergenic |
TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 2.2:+3621581 | None:intergenic |
TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 2.2:+3621683 | None:intergenic |
AGCCAGAAAGACGTGGGAGA+TGG | 0.532189 | 2.2:-3621359 | MS.gene051994:CDS |
AGCCAGAAAGACGTGGGAGA+TGG | 0.532189 | 2.2:-3621461 | MS.gene051994:CDS |
CAGCAATTCAGTGTTCGTGC+AGG | 0.535206 | 2.2:-3622183 | MS.gene051994:CDS |
TGTTCTGGTGATTATAGTGA+TGG | 0.537207 | 2.2:-3623951 | MS.gene051994:CDS |
GACGTGGGAGATGGATCAAA+GGG | 0.537670 | 2.2:-3621350 | MS.gene051994:CDS |
GACGTGGGAGATGGATCAAA+GGG | 0.537670 | 2.2:-3621452 | MS.gene051994:CDS |
CCGATCGTTGTTGGGAGTGG+TGG | 0.539432 | 2.2:-3624110 | MS.gene051994:CDS |
AGACGTGGGAGATGGATCAA+AGG | 0.541851 | 2.2:-3621351 | MS.gene051994:CDS |
AGACGTGGGAGATGGATCAA+AGG | 0.541851 | 2.2:-3621453 | MS.gene051994:CDS |
TTTATGAAATTCTATACGAT+GGG | 0.547975 | 2.2:-3622213 | MS.gene051994:CDS |
AGACGTGGGAGGAGGATCAA+AGG | 0.549459 | 2.2:-3620943 | MS.gene051994:CDS |
GGAACATGATTACGGTTCTA+CGG | 0.552732 | 2.2:-3624159 | MS.gene051994:CDS |
TTGTCATATAATGGGATACA+TGG | 0.555297 | 2.2:-3623307 | MS.gene051994:CDS |
GGAAGATATTCAAGATGGGT+CGG | 0.555317 | 2.2:-3620311 | MS.gene051994:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 2.2:-3621563 | MS.gene051994:CDS |
AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 2.2:-3621665 | MS.gene051994:CDS |
AATTATACAAAGAATACTCA+AGG | 0.560869 | 2.2:-3624032 | MS.gene051994:CDS |
GAAGATTGGTTTCTTGAATG+TGG | 0.561039 | 2.2:-3622050 | MS.gene051994:CDS |
CTGGCTATCAGGCTGAGACA+TGG | 0.561329 | 2.2:+3621580 | None:intergenic |
CCACCACTCCCAACAACGAT+CGG | 0.562593 | 2.2:+3624110 | None:intergenic |
AAAGGGAGGTAGTCAAAGTG+AGG | 0.563138 | 2.2:-3620844 | MS.gene051994:CDS |
TGCAGGAAATTTGAATCTCG+AGG | 0.563863 | 2.2:-3622166 | MS.gene051994:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564360 | 2.2:-3621044 | MS.gene051994:CDS |
GTTTATGAAATTCTATACGA+TGG | 0.564495 | 2.2:-3622214 | MS.gene051994:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 2.2:-3621146 | MS.gene051994:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 2.2:-3621248 | MS.gene051994:CDS |
TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 2.2:+3623402 | None:intergenic |
GGTGATAAAGGTGAAGATGA+TGG | 0.566914 | 2.2:-3623930 | MS.gene051994:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 2.2:-3621155 | MS.gene051994:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 2.2:-3621257 | MS.gene051994:CDS |
AATGTTTGATCTTGTTGCGT+TGG | 0.571747 | 2.2:-3622084 | MS.gene051994:CDS |
GCCTGATAGCCAAAGAGACG+TGG | 0.572696 | 2.2:-3621672 | MS.gene051994:CDS |
TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 2.2:-3623761 | MS.gene051994:CDS |
TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 2.2:-3623291 | MS.gene051994:CDS |
GCAGGAAATTTGAATCTCGA+GGG | 0.574935 | 2.2:-3622165 | MS.gene051994:CDS |
AGAAAGATGCTCAGTGCTTG+CGG | 0.575791 | 2.2:+3621607 | None:intergenic |
GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 2.2:+3622392 | None:intergenic |
AGGCACCTGTTAGGGCATCA+AGG | 0.577424 | 2.2:-3620604 | MS.gene051994:CDS |
GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 2.2:-3621570 | MS.gene051994:CDS |
AGAAAGATGCTCAGTGCTTG+CGG | 0.581054 | 2.2:+3621301 | None:intergenic |
AGAAAGATGCTCAGTGCTTG+CGG | 0.581054 | 2.2:+3621403 | None:intergenic |
ACTCTGTCATCTTCGTTAGA+CGG | 0.581881 | 2.2:+3620421 | None:intergenic |
AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 2.2:+3623398 | None:intergenic |
TAGTCAAAGTGAGGTTGTCA+AGG | 0.584509 | 2.2:-3620835 | MS.gene051994:CDS |
CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 2.2:-3623585 | MS.gene051994:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.585400 | 2.2:-3621045 | MS.gene051994:CDS |
TTGGCTATCAGGCTGAGACA+TGG | 0.587354 | 2.2:+3621682 | None:intergenic |
GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 2.2:-3623882 | MS.gene051994:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 2.2:-3621162 | MS.gene051994:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 2.2:-3621264 | MS.gene051994:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 2.2:-3621366 | MS.gene051994:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 2.2:-3621468 | MS.gene051994:CDS |
ATGCGTGCTGTTATTAAGGA+TGG | 0.593265 | 2.2:-3623213 | MS.gene051994:CDS |
TGTAGGAAGATATTCAAGAT+GGG | 0.595716 | 2.2:-3620315 | MS.gene051994:intron |
GTTGACAAAATATCTTGAGG+AGG | 0.598346 | 2.2:-3622239 | MS.gene051994:CDS |
AAAAGGAAAAGAAGAACGCA+TGG | 0.604515 | 2.2:-3620629 | MS.gene051994:CDS |
GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 2.2:-3623978 | MS.gene051994:CDS |
TGAACCTACTGTGAATGTGA+TGG | 0.609255 | 2.2:-3620278 | MS.gene051994:CDS |
GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 2.2:-3623294 | MS.gene051994:CDS |
CTGGCAATGGATCACGTATG+TGG | 0.614693 | 2.2:+3621831 | None:intergenic |
TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 2.2:-3622374 | MS.gene051994:CDS |
GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 2.2:-3623897 | MS.gene051994:CDS |
GTAAGAAAATGTTCAAACTG+TGG | 0.620533 | 2.2:-3621761 | MS.gene051994:CDS |
ACTTCCATCACATTCACAGT+AGG | 0.626348 | 2.2:+3620274 | None:intergenic |
AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 2.2:-3623584 | MS.gene051994:CDS |
TTGACAAAATATCTTGAGGA+GGG | 0.634347 | 2.2:-3622238 | MS.gene051994:CDS |
GAAAAGAAGAACGCATGGTG+AGG | 0.635164 | 2.2:-3620624 | MS.gene051994:CDS |
TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 2.2:+3623408 | None:intergenic |
TGTTACTGGAAACTCAACAA+TGG | 0.640006 | 2.2:-3621855 | MS.gene051994:CDS |
CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 2.2:-3623503 | MS.gene051994:CDS |
CAGGAAATTTGAATCTCGAG+GGG | 0.648693 | 2.2:-3622164 | MS.gene051994:CDS |
GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 2.2:-3622242 | MS.gene051994:CDS |
CAAAGGGAGCCAAATCAAAG+AGG | 0.652690 | 2.2:-3621436 | MS.gene051994:CDS |
GATTTAGGAGTCCAAAGTCG+CGG | 0.652766 | 2.2:-3620488 | MS.gene051994:intron |
AGTGATTGTCATCGTAGTGA+AGG | 0.654448 | 2.2:-3623816 | MS.gene051994:CDS |
ATTATACAAAGAATACTCAA+GGG | 0.665058 | 2.2:-3624031 | MS.gene051994:CDS |
TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 2.2:-3623772 | MS.gene051994:CDS |
TTAACAGTGAGATTGTAATG+AGG | 0.666140 | 2.2:-3623608 | MS.gene051994:CDS |
TCATATAATGGGATACATGG+TGG | 0.669224 | 2.2:-3623304 | MS.gene051994:CDS |
CCTGATAGCCAAAGAGACGT+GGG | 0.674856 | 2.2:-3621671 | MS.gene051994:CDS |
CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 2.2:-3622038 | MS.gene051994:CDS |
TGTTTATCGGAAAATATCTG+AGG | 0.678939 | 2.2:-3623376 | MS.gene051994:CDS |
GGTGAACGTGATGAAGGTGA+AGG | 0.680195 | 2.2:-3623876 | MS.gene051994:CDS |
CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 2.2:-3621640 | MS.gene051994:CDS |
GATGATGATGATGTGAGTCA+TGG | 0.683220 | 2.2:-3624056 | MS.gene051994:CDS |
AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 2.2:-3622296 | MS.gene051994:CDS |
CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 2.2:-3621569 | MS.gene051994:CDS |
GGATAAGAACATTGACAGTG+AGG | 0.691214 | 2.2:-3620690 | MS.gene051994:CDS |
CCATTGCCAGTGAAGTGCAA+AGG | 0.692298 | 2.2:-3621818 | MS.gene051994:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 2.2:-3621161 | MS.gene051994:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 2.2:-3621263 | MS.gene051994:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 2.2:-3621365 | MS.gene051994:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 2.2:-3621467 | MS.gene051994:CDS |
GTGGCAGAAGGATTAAAGGG+AGG | 0.699976 | 2.2:-3620858 | MS.gene051994:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.703216 | 2.2:-3621041 | MS.gene051994:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.703216 | 2.2:-3621143 | MS.gene051994:CDS |
GACAATGAAAGTGATGATGG+TGG | 0.706532 | 2.2:-3623975 | MS.gene051994:CDS |
ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 2.2:-3623339 | MS.gene051994:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.709029 | 2.2:-3621653 | MS.gene051994:CDS |
GTGGGAGGAGGATCAAAGGG+AGG | 0.710691 | 2.2:-3620939 | MS.gene051994:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 2.2:-3623846 | MS.gene051994:CDS |
GGTGAAGGTGATGAAAGTGA+AGG | 0.739796 | 2.2:-3623861 | MS.gene051994:CDS |
AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 2.2:-3623906 | MS.gene051994:CDS |
ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 2.2:+3623514 | None:intergenic |
CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 2.2:+3622393 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACGATTTTTATTATAAGTA+CGG | - | chr2.2:3620771-3620790 | MS.gene051994:intron | 15.0% |
!! | AAATCATAAAGAGTTATGTT+AGG | - | chr2.2:3621933-3621952 | MS.gene051994:CDS | 20.0% |
!! | AAATTGAGAAGTTAATCAAA+AGG | + | chr2.2:3623733-3623752 | None:intergenic | 20.0% |
!! | AATAAGAACTTGTCATATAA+TGG | - | chr2.2:3621133-3621152 | MS.gene051994:CDS | 20.0% |
!! | AATTATACAAAGAATACTCA+AGG | - | chr2.2:3620417-3620436 | MS.gene051994:intron | 20.0% |
!! | ATAAGAACTTGTCATATAAT+GGG | - | chr2.2:3621134-3621153 | MS.gene051994:CDS | 20.0% |
!! | ATTAAAAAACAGCATATATG+AGG | + | chr2.2:3623922-3623941 | None:intergenic | 20.0% |
!! | ATTATACAAAGAATACTCAA+GGG | - | chr2.2:3620418-3620437 | MS.gene051994:intron | 20.0% |
!! | CTTCAACACAAAAAAAAAAT+GGG | + | chr2.2:3622320-3622339 | None:intergenic | 20.0% |
!! | TTTATGAAATTCTATACGAT+GGG | - | chr2.2:3622236-3622255 | MS.gene051994:CDS | 20.0% |
!!! | ACATGGATAATTTTTGATTT+AGG | - | chr2.2:3623946-3623965 | MS.gene051994:CDS | 20.0% |
!!! | ACGTTTGAAATGTTTATTTT+GGG | - | chr2.2:3621346-3621365 | MS.gene051994:CDS | 20.0% |
!!! | CTCTTTATGATTTTATTAAC+AGG | + | chr2.2:3621926-3621945 | None:intergenic | 20.0% |
!!! | TTGATTAACTTCTCAATTTT+TGG | - | chr2.2:3623734-3623753 | MS.gene051994:CDS | 20.0% |
! | AAACAATAGACACTTATATG+TGG | - | chr2.2:3621528-3621547 | MS.gene051994:CDS | 25.0% |
! | AACAATAGACACTTATATGT+GGG | - | chr2.2:3621529-3621548 | MS.gene051994:CDS | 25.0% |
! | ACTTAACATTCAGATAGTTT+AGG | + | chr2.2:3621277-3621296 | None:intergenic | 25.0% |
! | ATAAATTCATTAACTGCTGA+AGG | - | chr2.2:3620711-3620730 | MS.gene051994:intron | 25.0% |
! | ATATATGAGGTCAAGAATAT+GGG | + | chr2.2:3623909-3623928 | None:intergenic | 25.0% |
! | ATATGAGAACAAAGAATTGT+GGG | - | chr2.2:3621841-3621860 | MS.gene051994:CDS | 25.0% |
! | CCAACAATGTGTTTAAATAT+AGG | - | chr2.2:3623670-3623689 | MS.gene051994:CDS | 25.0% |
! | CCTATATTTAAACACATTGT+TGG | + | chr2.2:3623673-3623692 | None:intergenic | 25.0% |
! | CCTTCAACACAAAAAAAAAA+TGG | + | chr2.2:3622321-3622340 | None:intergenic | 25.0% |
! | CTTAACATTCAGATAGTTTA+GGG | + | chr2.2:3621276-3621295 | None:intergenic | 25.0% |
! | GTTTATGAAATTCTATACGA+TGG | - | chr2.2:3622235-3622254 | MS.gene051994:CDS | 25.0% |
!! | AGCAATGTACTCTAATTTTA+CGG | - | chr2.2:3621742-3621761 | MS.gene051994:CDS | 25.0% |
!! | ATGTGTTTACAAATTTTTGC+AGG | - | chr2.2:3622482-3622501 | MS.gene051994:CDS | 25.0% |
!! | GAACATTTTCTTACAAACTT+TGG | + | chr2.2:3622682-3622701 | None:intergenic | 25.0% |
!! | TGTGTTTACAAATTTTTGCA+GGG | - | chr2.2:3622483-3622502 | MS.gene051994:CDS | 25.0% |
!! | TTCTTTGTTCTCATATGTTT+TGG | + | chr2.2:3621837-3621856 | None:intergenic | 25.0% |
!!! | CCATTTTTTTTTTGTGTTGA+AGG | - | chr2.2:3622318-3622337 | MS.gene051994:CDS | 25.0% |
!!! | GACGTTTGAAATGTTTATTT+TGG | - | chr2.2:3621345-3621364 | MS.gene051994:CDS | 25.0% |
!!! | GCTGTTTTTTAATGTTAACA+TGG | - | chr2.2:3623929-3623948 | MS.gene051994:CDS | 25.0% |
AAGAGTTATGTTAGGAAGAA+AGG | - | chr2.2:3621941-3621960 | MS.gene051994:CDS | 30.0% | |
AAGCTAAAGTAGGAAAGAAA+AGG | - | chr2.2:3623803-3623822 | MS.gene051994:CDS | 30.0% | |
ACAAAAAAAAAATGGGAGCA+TGG | + | chr2.2:3622313-3622332 | None:intergenic | 30.0% | |
ACATATCTTCCTCTTTGATT+TGG | + | chr2.2:3623025-3623044 | None:intergenic | 30.0% | |
ACATGTCTTCCTATTTGATT+TGG | + | chr2.2:3623127-3623146 | None:intergenic | 30.0% | |
AGCATTTATCAAGGTTAGAT+AGG | - | chr2.2:3620901-3620920 | MS.gene051994:CDS | 30.0% | |
ATATTACTTGTGCAGTAAGT+AGG | + | chr2.2:3623707-3623726 | None:intergenic | 30.0% | |
ATTACGTTTAGACTCAACAT+TGG | + | chr2.2:3624074-3624093 | None:intergenic | 30.0% | |
ATTCATGAACAAGCTAAAGT+AGG | - | chr2.2:3623793-3623812 | MS.gene051994:CDS | 30.0% | |
CAAATATAACTGTTTGTGAG+TGG | + | chr2.2:3621487-3621506 | None:intergenic | 30.0% | |
CACTCACAAACAGTTATATT+TGG | - | chr2.2:3621485-3621504 | MS.gene051994:CDS | 30.0% | |
CATATATGAGGTCAAGAATA+TGG | + | chr2.2:3623910-3623929 | None:intergenic | 30.0% | |
CATATGAGAACAAAGAATTG+TGG | - | chr2.2:3621840-3621859 | MS.gene051994:CDS | 30.0% | |
GAAGTTGACAAAATATCTTG+AGG | - | chr2.2:3622207-3622226 | MS.gene051994:CDS | 30.0% | |
GAATATTCACAAAAGGAATG+TGG | + | chr2.2:3621311-3621330 | None:intergenic | 30.0% | |
GGTACTTACTTTCATATTCA+CGG | + | chr2.2:3623652-3623671 | None:intergenic | 30.0% | |
GTAAGAAAATGTTCAAACTG+TGG | - | chr2.2:3622688-3622707 | MS.gene051994:intron | 30.0% | |
GTGAAAGAAGAGATTATGAA+AGG | - | chr2.2:3622133-3622152 | MS.gene051994:CDS | 30.0% | |
TATAAGTACGGTAAGTGTAA+TGG | - | chr2.2:3620783-3620802 | MS.gene051994:intron | 30.0% | |
TGCTCCAAAGAAGAATAAAA+AGG | - | chr2.2:3622654-3622673 | MS.gene051994:intron | 30.0% | |
TGTAGGAAGATATTCAAGAT+GGG | - | chr2.2:3624134-3624153 | MS.gene051994:CDS | 30.0% | |
TGTTTATCGGAAAATATCTG+AGG | - | chr2.2:3621073-3621092 | MS.gene051994:CDS | 30.0% | |
TTAACAGTGAGATTGTAATG+AGG | - | chr2.2:3620841-3620860 | MS.gene051994:CDS | 30.0% | |
TTGACAAAATATCTTGAGGA+GGG | - | chr2.2:3622211-3622230 | MS.gene051994:CDS | 30.0% | |
! | AAAAATGCGTGCTGTTATTA+AGG | - | chr2.2:3621232-3621251 | MS.gene051994:CDS | 30.0% |
! | AATGTACTCTAATTTTACGG+AGG | - | chr2.2:3621745-3621764 | MS.gene051994:CDS | 30.0% |
! | ACAACATATCTACCCTTTTT+GGG | + | chr2.2:3620990-3621009 | None:intergenic | 30.0% |
! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr2.2:3621557-3621576 | MS.gene051994:CDS | 30.0% |
! | AGGATGAATTTGAAGAGTTT+TGG | - | chr2.2:3621765-3621784 | MS.gene051994:CDS | 30.0% |
! | CAGAACATGTCTTTTTCTTT+GGG | + | chr2.2:3623539-3623558 | None:intergenic | 30.0% |
! | CAGATATTTTCCGATAAACA+GGG | + | chr2.2:3621073-3621092 | None:intergenic | 30.0% |
! | GAAGAAAATGATAATGTGTC+AGG | - | chr2.2:3623998-3624017 | MS.gene051994:CDS | 30.0% |
! | GATGAATTTGAAGAGTTTTG+GGG | - | chr2.2:3621767-3621786 | MS.gene051994:CDS | 30.0% |
! | GATTATAGTGATGGTGATAA+AGG | - | chr2.2:3620507-3620526 | MS.gene051994:intron | 30.0% |
! | GGATGAATTTGAAGAGTTTT+GGG | - | chr2.2:3621766-3621785 | MS.gene051994:CDS | 30.0% |
! | TCAGATATTTTCCGATAAAC+AGG | + | chr2.2:3621074-3621093 | None:intergenic | 30.0% |
! | TTGTCATATAATGGGATACA+TGG | - | chr2.2:3621142-3621161 | MS.gene051994:CDS | 30.0% |
!! | AAGTCAAAAGCATTTCTCAT+TGG | + | chr2.2:3624107-3624126 | None:intergenic | 30.0% |
!! | AGATCAGATTATTTCTGCTT+TGG | - | chr2.2:3621383-3621402 | MS.gene051994:CDS | 30.0% |
!! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr2.2:3621768-3621787 | MS.gene051994:CDS | 30.0% |
!! | TTGTAGCTGATTTTAAATCC+AGG | - | chr2.2:3622026-3622045 | MS.gene051994:CDS | 30.0% |
!!! | AAATGTTTATTTTGGGCAGA+TGG | - | chr2.2:3621353-3621372 | MS.gene051994:CDS | 30.0% |
!!! | AACAATGCCTTTACTGATTT+TGG | - | chr2.2:3620261-3620280 | MS.gene051994:CDS | 30.0% |
!!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr2.2:3621710-3621729 | MS.gene051994:CDS | 30.0% |
!!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr2.2:3621005-3621024 | MS.gene051994:CDS | 30.0% |
!!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr2.2:3621706-3621725 | MS.gene051994:CDS | 30.0% |
!!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr2.2:3621004-3621023 | MS.gene051994:CDS | 30.0% |
!!! | TTAACTTCTCAATTTTTGGC+AGG | - | chr2.2:3623738-3623757 | MS.gene051994:CDS | 30.0% |
AAAAGGAAAAGAAGAACGCA+TGG | - | chr2.2:3623820-3623839 | MS.gene051994:CDS | 35.0% | |
AAGAATACTCAAGGGAATAC+AGG | - | chr2.2:3620426-3620445 | MS.gene051994:CDS | 35.0% | |
AATGTTTGATCTTGTTGCGT+TGG | - | chr2.2:3622365-3622384 | MS.gene051994:CDS | 35.0% | |
AGTGGCAGAATATTCACAAA+AGG | + | chr2.2:3621318-3621337 | None:intergenic | 35.0% | |
CAGTAACAATTGGAACTTCA+GGG | + | chr2.2:3622582-3622601 | None:intergenic | 35.0% | |
CATTAACTGCTGAAGGAATA+AGG | - | chr2.2:3620718-3620737 | MS.gene051994:intron | 35.0% | |
CTGTTAGGAAGAGTGATATT+AGG | - | chr2.2:3620811-3620830 | MS.gene051994:CDS | 35.0% | |
GTAGATAAAGCACAGATTGA+TGG | - | chr2.2:3621095-3621114 | MS.gene051994:CDS | 35.0% | |
GTGAAGGAAAAAGAAGTGAA+TGG | - | chr2.2:3622169-3622188 | MS.gene051994:CDS | 35.0% | |
GTGTAGGAAGATATTCAAGA+TGG | - | chr2.2:3624133-3624152 | MS.gene051994:CDS | 35.0% | |
GTTGACAAAATATCTTGAGG+AGG | - | chr2.2:3622210-3622229 | MS.gene051994:CDS | 35.0% | |
GTTGAGTTTCCAGTAACAAT+TGG | + | chr2.2:3622592-3622611 | None:intergenic | 35.0% | |
TCCCATACAATCTAGAAAAC+TGG | + | chr2.2:3621561-3621580 | None:intergenic | 35.0% | |
TGCATTTACACCCTGTTTAT+CGG | - | chr2.2:3621060-3621079 | MS.gene051994:CDS | 35.0% | |
TGCTGAAGGAATAAGGAAAA+TGG | - | chr2.2:3620725-3620744 | MS.gene051994:intron | 35.0% | |
TGGATGACATACAAAAGCTT+CGG | - | chr2.2:3622542-3622561 | MS.gene051994:intron | 35.0% | |
TGTTACTGGAAACTCAACAA+TGG | - | chr2.2:3622594-3622613 | MS.gene051994:intron | 35.0% | |
TGTTCTGGTGATTATAGTGA+TGG | - | chr2.2:3620498-3620517 | MS.gene051994:intron | 35.0% | |
! | AAAGCATTTCTCATTGGACT+GGG | + | chr2.2:3624101-3624120 | None:intergenic | 35.0% |
! | CACAACATATCTACCCTTTT+TGG | + | chr2.2:3620991-3621010 | None:intergenic | 35.0% |
! | GAAGATGATGATGTAGTTGT+TGG | - | chr2.2:3620672-3620691 | MS.gene051994:CDS | 35.0% |
! | GACCAGTTTTCTAGATTGTA+TGG | - | chr2.2:3621556-3621575 | MS.gene051994:CDS | 35.0% |
! | GCAGAACATGTCTTTTTCTT+TGG | + | chr2.2:3623540-3623559 | None:intergenic | 35.0% |
! | GGAAGTAGATTCTAAGTTGA+TGG | - | chr2.2:3622432-3622451 | MS.gene051994:CDS | 35.0% |
! | GGTGCCTTTTTATTCTTCTT+TGG | + | chr2.2:3622661-3622680 | None:intergenic | 35.0% |
! | TCATATAATGGGATACATGG+TGG | - | chr2.2:3621145-3621164 | MS.gene051994:CDS | 35.0% |
! | TCTTGAATGTGGACTATTGT+GGG | - | chr2.2:3622410-3622429 | MS.gene051994:CDS | 35.0% |
! | TTCTTGAATGTGGACTATTG+TGG | - | chr2.2:3622409-3622428 | MS.gene051994:CDS | 35.0% |
!! | AAAAGCATTTCTCATTGGAC+TGG | + | chr2.2:3624102-3624121 | None:intergenic | 35.0% |
!! | AGTTATATTTGGTGCTGCAT+TGG | - | chr2.2:3621496-3621515 | MS.gene051994:CDS | 35.0% |
!! | ATTTCTGCACAATTTTGACG+AGG | - | chr2.2:3621976-3621995 | MS.gene051994:CDS | 35.0% |
!! | GAAGATTGGTTTCTTGAATG+TGG | - | chr2.2:3622399-3622418 | MS.gene051994:CDS | 35.0% |
!! | GAGAGAAGAAGCATTTATCA+AGG | - | chr2.2:3620892-3620911 | MS.gene051994:CDS | 35.0% |
!!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr2.2:3620796-3620815 | MS.gene051994:intron | 35.0% |
!!! | CTTTACTGATTTTGGTACAC+CGG | - | chr2.2:3620269-3620288 | MS.gene051994:CDS | 35.0% |
!!! | CTTTTGACTTGTGTTTGTGT+AGG | - | chr2.2:3624117-3624136 | MS.gene051994:CDS | 35.0% |
!!! | TCATATGTTTTGGTAACCCA+TGG | + | chr2.2:3621827-3621846 | None:intergenic | 35.0% |
!!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr2.2:3621769-3621788 | MS.gene051994:CDS | 35.0% |
!!! | TTTTTTAGTGAACCCAACAC+CGG | + | chr2.2:3621189-3621208 | None:intergenic | 35.0% |
AAAAAGACGTTCAGTGTCTG+CGG | + | chr2.2:3622743-3622762 | None:intergenic | 40.0% | |
AAACACATCCGATCGTTGTT+GGG | - | chr2.2:3620331-3620350 | MS.gene051994:intron | 40.0% | |
AAAGGAATGTGGATCAGTTG+AGG | + | chr2.2:3621300-3621319 | None:intergenic | 40.0% | |
ACAAAATCACCAACGGATAG+TGG | + | chr2.2:3621451-3621470 | None:intergenic | 40.0% | |
ACTCTGTCATCTTCGTTAGA+CGG | + | chr2.2:3624031-3624050 | None:intergenic | 40.0% | |
ACTTCCATCACATTCACAGT+AGG | + | chr2.2:3624178-3624197 | None:intergenic | 40.0% | |
ACTTTGTACGAGTGATACGT+CGG | + | chr2.2:3620938-3620957 | None:intergenic | 40.0% | |
AGTATGTATGCAACAAGCAG+GGG | - | chr2.2:3620865-3620884 | MS.gene051994:CDS | 40.0% | |
AGTGAAGGTGATGAAAGTGA+AGG | - | chr2.2:3620603-3620622 | MS.gene051994:CDS | 40.0% | |
AGTGAATGCGATGAAAGTCA+AGG | - | chr2.2:3620543-3620562 | MS.gene051994:intron | 40.0% | |
AGTGATTGTCATCGTAGTGA+AGG | - | chr2.2:3620633-3620652 | MS.gene051994:CDS | 40.0% | |
ATCACATTCACAGTAGGTTC+AGG | + | chr2.2:3624172-3624191 | None:intergenic | 40.0% | |
CAAAGGGAGCCAAATCAAAT+AGG | - | chr2.2:3623115-3623134 | MS.gene051994:intron | 40.0% | |
CAAAGGGAGGAAAATCAAAG+AGG | - | chr2.2:3622809-3622828 | MS.gene051994:intron | 40.0% | |
CAGGAAATTTGAATCTCGAG+GGG | - | chr2.2:3622285-3622304 | MS.gene051994:CDS | 40.0% | |
CAGTATGTATGCAACAAGCA+GGG | - | chr2.2:3620864-3620883 | MS.gene051994:CDS | 40.0% | |
CCAAAAGCAGTTGTAACAGA+TGG | - | chr2.2:3621590-3621609 | MS.gene051994:CDS | 40.0% | |
CCAGTAACAATTGGAACTTC+AGG | + | chr2.2:3622583-3622602 | None:intergenic | 40.0% | |
CCTGAAGTTCCAATTGTTAC+TGG | - | chr2.2:3622580-3622599 | MS.gene051994:intron | 40.0% | |
CGCAACAAGATCAAACATTC+TGG | + | chr2.2:3622364-3622383 | None:intergenic | 40.0% | |
CGGTGTACCAAAATCAGTAA+AGG | + | chr2.2:3620271-3620290 | None:intergenic | 40.0% | |
GAACAAATACCACTATCCGT+TGG | - | chr2.2:3621439-3621458 | MS.gene051994:CDS | 40.0% | |
GAAGATATTCAAGATGGGTC+GGG | - | chr2.2:3624139-3624158 | MS.gene051994:CDS | 40.0% | |
GAATATTCTGCCACTGATGA+CGG | - | chr2.2:3621323-3621342 | MS.gene051994:CDS | 40.0% | |
GATGAAAGTCAAGGTGATGA+AGG | - | chr2.2:3620552-3620571 | MS.gene051994:intron | 40.0% | |
GATGAGCGATATGATGAAAC+TGG | - | chr2.2:3620450-3620469 | MS.gene051994:CDS | 40.0% | |
GCAGGAAATTTGAATCTCGA+GGG | - | chr2.2:3622284-3622303 | MS.gene051994:CDS | 40.0% | |
GCATCTGAACAAGAATGCTA+TGG | - | chr2.2:3621679-3621698 | MS.gene051994:CDS | 40.0% | |
GGAACATGATTACGGTTCTA+CGG | - | chr2.2:3620290-3620309 | MS.gene051994:CDS | 40.0% | |
GGAAGATATTCAAGATGGGT+CGG | - | chr2.2:3624138-3624157 | MS.gene051994:CDS | 40.0% | |
GGAGACAATGAAAGTGATGA+TGG | - | chr2.2:3620471-3620490 | MS.gene051994:CDS | 40.0% | |
GGATAAGAACATTGACAGTG+AGG | - | chr2.2:3623759-3623778 | MS.gene051994:CDS | 40.0% | |
GGATGACATACAAAAGCTTC+GGG | - | chr2.2:3622543-3622562 | MS.gene051994:intron | 40.0% | |
GGTGATAAAGGTGAAGATGA+TGG | - | chr2.2:3620519-3620538 | MS.gene051994:intron | 40.0% | |
GTAGAACCGTAATCATGTTC+CGG | + | chr2.2:3620291-3620310 | None:intergenic | 40.0% | |
GTTCACTACAGACCCAAAAA+GGG | - | chr2.2:3620975-3620994 | MS.gene051994:CDS | 40.0% | |
TAGTCAAAGTGAGGTTGTCA+AGG | - | chr2.2:3623614-3623633 | MS.gene051994:CDS | 40.0% | |
TGAACCTACTGTGAATGTGA+TGG | - | chr2.2:3624171-3624190 | MS.gene051994:CDS | 40.0% | |
TGCAGGAAATTTGAATCTCG+AGG | - | chr2.2:3622283-3622302 | MS.gene051994:CDS | 40.0% | |
TGTTCACTACAGACCCAAAA+AGG | - | chr2.2:3620974-3620993 | MS.gene051994:CDS | 40.0% | |
TTGATGGAGATTGCTCGATA+TGG | - | chr2.2:3622448-3622467 | MS.gene051994:CDS | 40.0% | |
! | AGCATACAAGCTACCCTTTT+TGG | + | chr2.2:3622515-3622534 | None:intergenic | 40.0% |
! | ATGCGTGCTGTTATTAAGGA+TGG | - | chr2.2:3621236-3621255 | MS.gene051994:CDS | 40.0% |
! | ATTGATGGTCTTCAGTCACA+CGG | - | chr2.2:3621110-3621129 | MS.gene051994:CDS | 40.0% |
! | CAGCACAGGTCTTTTTCTTT+GGG | + | chr2.2:3623335-3623354 | None:intergenic | 40.0% |
! | CCATCTGTTACAACTGCTTT+TGG | + | chr2.2:3621593-3621612 | None:intergenic | 40.0% |
! | CTTGAATGTGGACTATTGTG+GGG | - | chr2.2:3622411-3622430 | MS.gene051994:CDS | 40.0% |
! | GATGATGATGATGTGAGTCA+TGG | - | chr2.2:3620393-3620412 | MS.gene051994:intron | 40.0% |
! | TAACCCATGGATTGTTCTCA+AGG | + | chr2.2:3621814-3621833 | None:intergenic | 40.0% |
! | TGATGATGTAGTTGTTGGTG+AGG | - | chr2.2:3620677-3620696 | MS.gene051994:CDS | 40.0% |
! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr2.2:3620683-3620702 | MS.gene051994:CDS | 40.0% |
! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr2.2:3620688-3620707 | MS.gene051994:CDS | 40.0% |
!! | GACAATGAAAGTGATGATGG+TGG | - | chr2.2:3620474-3620493 | MS.gene051994:CDS | 40.0% |
!! | TGTAAATGCACAGCATTGGT+TGG | + | chr2.2:3621050-3621069 | None:intergenic | 40.0% |
!! | TTATTTCTGCTTTGGCGATG+TGG | - | chr2.2:3621391-3621410 | MS.gene051994:CDS | 40.0% |
!! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr2.2:3620974-3620993 | None:intergenic | 40.0% |
!! | TTTTTAGTGAACCCAACACC+GGG | + | chr2.2:3621188-3621207 | None:intergenic | 40.0% |
!!! | TATCCGTTGGTGATTTTGTC+AGG | - | chr2.2:3621452-3621471 | MS.gene051994:CDS | 40.0% |
AAAGGGAGGTAGTCAAAGTG+AGG | - | chr2.2:3623605-3623624 | MS.gene051994:CDS | 45.0% | |
AGAAAGATGCTCAGTGCTTG+CGG | + | chr2.2:3622845-3622864 | None:intergenic | 45.0% | |
AGACGTGGCAGAAGGATTAA+AGG | - | chr2.2:3623587-3623606 | MS.gene051994:CDS | 45.0% | |
AGGGTGTAAATGCACAGCAT+TGG | + | chr2.2:3621054-3621073 | None:intergenic | 45.0% | |
CAAAGGGAGCCAAATCAAAG+AGG | - | chr2.2:3623013-3623032 | MS.gene051994:intron | 45.0% | |
CAGCCTGACAAAATCACCAA+CGG | + | chr2.2:3621458-3621477 | None:intergenic | 45.0% | |
CATGCTAGCCAAAAAGACGT+GGG | - | chr2.2:3623390-3623409 | MS.gene051994:CDS | 45.0% | |
CGAGGCTGCTGAAATCTATA+CGG | - | chr2.2:3622093-3622112 | MS.gene051994:CDS | 45.0% | |
CTTGTTGCGTTGGACGAAAA+AGG | - | chr2.2:3622375-3622394 | MS.gene051994:CDS | 45.0% | |
GAAAAGAAGAACGCATGGTG+AGG | - | chr2.2:3623825-3623844 | MS.gene051994:CDS | 45.0% | |
GAAACACATCCGATCGTTGT+TGG | - | chr2.2:3620330-3620349 | MS.gene051994:intron | 45.0% | |
GACGTGGCAGAAGGATTAAA+GGG | - | chr2.2:3623588-3623607 | MS.gene051994:CDS | 45.0% | |
GATGAAGGTGAACGTGATGA+AGG | - | chr2.2:3620567-3620586 | MS.gene051994:intron | 45.0% | |
GATTTAGGAGTCCAAAGTCG+CGG | - | chr2.2:3623961-3623980 | MS.gene051994:CDS | 45.0% | |
GCAGTATGTATGCAACAAGC+AGG | - | chr2.2:3620863-3620882 | MS.gene051994:CDS | 45.0% | |
GCAGTTGTAACAGATGGTGA+CGG | - | chr2.2:3621596-3621615 | MS.gene051994:CDS | 45.0% | |
GGTACACCGGAACATGATTA+CGG | - | chr2.2:3620282-3620301 | MS.gene051994:CDS | 45.0% | |
GGTGAAGGTGATGAAAGTGA+AGG | - | chr2.2:3620588-3620607 | MS.gene051994:CDS | 45.0% | |
TACCTGCGTGACGATTTCTT+TGG | - | chr2.2:3621872-3621891 | MS.gene051994:CDS | 45.0% | |
TGATTACGGTTCTACGGATG+TGG | - | chr2.2:3620296-3620315 | MS.gene051994:CDS | 45.0% | |
TGGACGAAAAAGGCGAAGAT+TGG | - | chr2.2:3622385-3622404 | MS.gene051994:CDS | 45.0% | |
TTCTATGAGGGAGGCGATAA+AGG | - | chr2.2:3621619-3621638 | MS.gene051994:CDS | 45.0% | |
TTTCAAACGTCCGTCATCAG+TGG | + | chr2.2:3621336-3621355 | None:intergenic | 45.0% | |
! | AGTGTCTGCGGAACATTTTC+TGG | + | chr2.2:3622731-3622750 | None:intergenic | 45.0% |
! | ATCCTTCTCCCACGTCTTTT+TGG | + | chr2.2:3623401-3623420 | None:intergenic | 45.0% |
! | ATCCTTCTGCCACGTCTTTT+TGG | + | chr2.2:3623584-3623603 | None:intergenic | 45.0% |
! | ATGGCCTTGAGAACAATCCA+TGG | - | chr2.2:3621807-3621826 | MS.gene051994:CDS | 45.0% |
! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr2.2:3621037-3621056 | None:intergenic | 45.0% |
! | GCAGCACAGGTCTTTTTCTT+TGG | + | chr2.2:3623336-3623355 | None:intergenic | 45.0% |
! | TAGCTTGTATGCTGATGTGC+TGG | - | chr2.2:3622522-3622541 | MS.gene051994:intron | 45.0% |
! | TAGGGCATCAAGGAGACTAA+TGG | - | chr2.2:3623855-3623874 | MS.gene051994:CDS | 45.0% |
! | TGGCCTTGAGAACAATCCAT+GGG | - | chr2.2:3621808-3621827 | MS.gene051994:CDS | 45.0% |
!! | AGATGGTGACGGTTCTATGA+GGG | - | chr2.2:3621607-3621626 | MS.gene051994:CDS | 45.0% |
!! | AGTGATGATGGTGGTTGTTC+TGG | - | chr2.2:3620483-3620502 | MS.gene051994:CDS | 45.0% |
!! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr2.2:3621502-3621521 | MS.gene051994:CDS | 45.0% |
!! | CAAGCACTGAGCATCTTTCT+GGG | - | chr2.2:3622845-3622864 | MS.gene051994:intron | 45.0% |
!! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr2.2:3622499-3622518 | MS.gene051994:intron | 45.0% |
!! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr2.2:3622498-3622517 | MS.gene051994:intron | 45.0% |
AGACGTGGGAGAAGGATCAA+AGG | - | chr2.2:3622792-3622811 | MS.gene051994:intron | 50.0% | |
AGACGTGGGAGATGGATCAA+AGG | - | chr2.2:3622996-3623015 | MS.gene051994:intron | 50.0% | |
AGCCAAAAAGACGTGGCAGA+AGG | - | chr2.2:3623579-3623598 | MS.gene051994:CDS | 50.0% | |
AGCCAAAAAGACGTGGGAGA+AGG | - | chr2.2:3623396-3623415 | MS.gene051994:CDS | 50.0% | |
AGTCTCCTTGATGCCCTAAC+AGG | + | chr2.2:3623853-3623872 | None:intergenic | 50.0% | |
ATCCATCTCCCACGTCTTTC+TGG | + | chr2.2:3622993-3623012 | None:intergenic | 50.0% | |
ATCCTTCTCCCACGTCTCTT+TGG | + | chr2.2:3622789-3622808 | None:intergenic | 50.0% | |
ATCCTTCTCCCACGTCTTTC+TGG | + | chr2.2:3622891-3622910 | None:intergenic | 50.0% | |
ATTCAAGATGGGTCGGGAAG+CGG | - | chr2.2:3624145-3624164 | MS.gene051994:CDS | 50.0% | |
ATTGTCCATTGCCGCGACTT+TGG | + | chr2.2:3623975-3623994 | None:intergenic | 50.0% | |
CACCAAAGAAATCGTCACGC+AGG | + | chr2.2:3621877-3621896 | None:intergenic | 50.0% | |
CAGATGAGTTGTCAGCACAG+GGG | + | chr2.2:3622059-3622078 | None:intergenic | 50.0% | |
CAGCAATTCAGTGTTCGTGC+AGG | - | chr2.2:3622266-3622285 | MS.gene051994:CDS | 50.0% | |
CATAGACGATGACGCGTACT+TGG | + | chr2.2:3621653-3621672 | None:intergenic | 50.0% | |
CATGCTAGCCAGAAAGACGT+GGG | - | chr2.2:3622982-3623001 | MS.gene051994:intron | 50.0% | |
CCATTGCCAGTGAAGTGCAA+AGG | - | chr2.2:3622631-3622650 | MS.gene051994:intron | 50.0% | |
CCTGATAGCCAAAGAGACGT+GGG | - | chr2.2:3622778-3622797 | MS.gene051994:intron | 50.0% | |
CCTGATAGCCAGAAAGACGT+GGG | - | chr2.2:3622880-3622899 | MS.gene051994:intron | 50.0% | |
CCTTTGCACTTCACTGGCAA+TGG | + | chr2.2:3622634-3622653 | None:intergenic | 50.0% | |
CTGCGTGACGATTTCTTTGG+TGG | - | chr2.2:3621875-3621894 | MS.gene051994:CDS | 50.0% | |
CTGGCAATGGATCACGTATG+TGG | + | chr2.2:3622621-3622640 | None:intergenic | 50.0% | |
GACGTGGGAGAAGGATCAAA+GGG | - | chr2.2:3622793-3622812 | MS.gene051994:intron | 50.0% | |
GACGTGGGAGATGGATCAAA+GGG | - | chr2.2:3622997-3623016 | MS.gene051994:intron | 50.0% | |
GAGTGCTAGCCAAAAAGACG+TGG | - | chr2.2:3623572-3623591 | MS.gene051994:CDS | 50.0% | |
GCAGATGAGTTGTCAGCACA+GGG | + | chr2.2:3622060-3622079 | None:intergenic | 50.0% | |
GCATGCTAGCCAAAAAGACG+TGG | - | chr2.2:3623389-3623408 | MS.gene051994:CDS | 50.0% | |
GGATACATGGTGGCTCAGAA+GGG | - | chr2.2:3621155-3621174 | MS.gene051994:CDS | 50.0% | |
GGTGAACGTGATGAAGGTGA+AGG | - | chr2.2:3620573-3620592 | MS.gene051994:intron | 50.0% | |
GTGGCAGAAGGATTAAAGGG+AGG | - | chr2.2:3623591-3623610 | MS.gene051994:CDS | 50.0% | |
TATGAGGGAGGCGATAAAGG+CGG | - | chr2.2:3621622-3621641 | MS.gene051994:CDS | 50.0% | |
TGGCTAGCATGCTGAGACAT+GGG | + | chr2.2:3622973-3622992 | None:intergenic | 50.0% | |
TGGCTAGCATGCTGAGACAT+TGG | + | chr2.2:3622973-3622992 | None:intergenic | 50.0% | |
TGGCTATCAGGCTGAGACAT+GGG | + | chr2.2:3622769-3622788 | None:intergenic | 50.0% | |
TTGGCTAGCATGCTGAGACA+TGG | + | chr2.2:3623382-3623401 | None:intergenic | 50.0% | |
TTGGCTATCAGGCTGAGACA+TGG | + | chr2.2:3622770-3622789 | None:intergenic | 50.0% | |
! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr2.2:3622153-3622172 | MS.gene051994:CDS | 50.0% |
! | ATCCTCCTCCCACGTCTTTT+TGG | + | chr2.2:3623503-3623522 | None:intergenic | 50.0% |
! | ATGTTGACTGCTTGCAGCAC+AGG | + | chr2.2:3623349-3623368 | None:intergenic | 50.0% |
! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr2.2:3620946-3620965 | MS.gene051994:CDS | 50.0% |
!! | CAGATGGTGACGGTTCTATG+AGG | - | chr2.2:3621606-3621625 | MS.gene051994:CDS | 50.0% |
!! | GCAAGCACTGAGCATCTTTC+TGG | - | chr2.2:3622844-3622863 | MS.gene051994:intron | 50.0% |
!! | TGCACAGCATTGGTTGGAGT+AGG | + | chr2.2:3621044-3621063 | None:intergenic | 50.0% |
!! | TGGCTAGCACTCTGAGACAT+AGG | + | chr2.2:3623564-3623583 | None:intergenic | 50.0% |
!!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr2.2:3621775-3621794 | MS.gene051994:CDS | 50.0% |
AAGGGTGGATATCCCGGTGT+TGG | - | chr2.2:3621173-3621192 | MS.gene051994:CDS | 55.0% | |
AGACGTGGGAGGAGGATCAA+AGG | - | chr2.2:3623506-3623525 | MS.gene051994:CDS | 55.0% | |
AGCCAAAAAGACGTGGGAGG+AGG | - | chr2.2:3623498-3623517 | MS.gene051994:CDS | 55.0% | |
AGCCAAAGAGACGTGGGAGA+AGG | - | chr2.2:3622784-3622803 | MS.gene051994:intron | 55.0% | |
AGCCAGAAAGACGTGGGAGA+AGG | - | chr2.2:3622886-3622905 | MS.gene051994:intron | 55.0% | |
AGCCAGAAAGACGTGGGAGA+TGG | - | chr2.2:3622886-3622905 | MS.gene051994:intron | 55.0% | |
AGGGTGGATATCCCGGTGTT+GGG | - | chr2.2:3621174-3621193 | MS.gene051994:CDS | 55.0% | |
CAGCACAGGGGATGAAAACC+TGG | + | chr2.2:3622047-3622066 | None:intergenic | 55.0% | |
CATCCGATCGTTGTTGGGAG+TGG | - | chr2.2:3620336-3620355 | MS.gene051994:intron | 55.0% | |
CCACCACTCCCAACAACGAT+CGG | + | chr2.2:3620342-3620361 | None:intergenic | 55.0% | |
CCCACGTCTCTTTGGCTATC+AGG | + | chr2.2:3622781-3622800 | None:intergenic | 55.0% | |
CGCAGATGAGTTGTCAGCAC+AGG | + | chr2.2:3622061-3622080 | None:intergenic | 55.0% | |
CGCGTCATCGTCTATGTGCT+TGG | - | chr2.2:3621657-3621676 | MS.gene051994:CDS | 55.0% | |
CTGGCTAGCATGCTGAGACA+TGG | + | chr2.2:3622974-3622993 | None:intergenic | 55.0% | |
CTGGCTATCAGGCTGAGACA+TGG | + | chr2.2:3622872-3622891 | None:intergenic | 55.0% | |
GACGTGGGAGGAGGATCAAA+GGG | - | chr2.2:3623507-3623526 | MS.gene051994:CDS | 55.0% | |
GCATGCTAGCCAGAAAGACG+TGG | - | chr2.2:3622981-3623000 | MS.gene051994:intron | 55.0% | |
GCCTGATAGCCAAAGAGACG+TGG | - | chr2.2:3622777-3622796 | MS.gene051994:intron | 55.0% | |
GCCTGATAGCCAGAAAGACG+TGG | - | chr2.2:3622879-3622898 | MS.gene051994:intron | 55.0% | |
GCTAGCCAAAAAGACGTGGG+AGG | - | chr2.2:3623393-3623412 | MS.gene051994:CDS | 55.0% | |
GCTCAGAAGGGTGGATATCC+CGG | - | chr2.2:3621167-3621186 | MS.gene051994:CDS | 55.0% | |
GGGATACATGGTGGCTCAGA+AGG | - | chr2.2:3621154-3621173 | MS.gene051994:CDS | 55.0% | |
GTGGGAGAAGGATCAAAGGG+AGG | - | chr2.2:3622796-3622815 | MS.gene051994:intron | 55.0% | |
TACATGGTGGCTCAGAAGGG+TGG | - | chr2.2:3621158-3621177 | MS.gene051994:CDS | 55.0% | |
TAGTGAACACGGAGCCTAGC+TGG | + | chr2.2:3620963-3620982 | None:intergenic | 55.0% | |
TCTGCGTTGTCTTGAACGCG+AGG | - | chr2.2:3622075-3622094 | MS.gene051994:CDS | 55.0% | |
! | AGGCACCTGTTAGGGCATCA+AGG | - | chr2.2:3623845-3623864 | MS.gene051994:CDS | 55.0% |
! | GCATGGTGAGGCACCTGTTA+GGG | - | chr2.2:3623837-3623856 | MS.gene051994:CDS | 55.0% |
! | GGAGCACCTTTGCACTTCAC+TGG | + | chr2.2:3622640-3622659 | None:intergenic | 55.0% |
!! | CCCACGTCTTTCTGGCTATC+AGG | + | chr2.2:3622883-3622902 | None:intergenic | 55.0% |
!! | GGGGACTTGGTGACGGAAAA+TGG | - | chr2.2:3621788-3621807 | MS.gene051994:CDS | 55.0% |
!! | TGGTGACGGTTCTATGAGGG+AGG | - | chr2.2:3621610-3621629 | MS.gene051994:CDS | 55.0% |
!!! | GTTTTGGGGGGACTTGGTGA+CGG | - | chr2.2:3621781-3621800 | MS.gene051994:CDS | 55.0% |
CCGATCGTTGTTGGGAGTGG+TGG | - | chr2.2:3620339-3620358 | MS.gene051994:intron | 60.0% | |
GGAGTCCAAAGTCGCGGCAA+TGG | - | chr2.2:3623967-3623986 | MS.gene051994:CDS | 60.0% | |
GTGGGAGGAGGATCAAAGGG+AGG | - | chr2.2:3623510-3623529 | MS.gene051994:CDS | 60.0% | |
! | CGCATGGTGAGGCACCTGTT+AGG | - | chr2.2:3623836-3623855 | MS.gene051994:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 3620249 | 3624222 | 3620249 | ID=MS.gene051994 |
chr2.2 | mRNA | 3620249 | 3624222 | 3620249 | ID=MS.gene051994.t1;Parent=MS.gene051994 |
chr2.2 | exon | 3623177 | 3624222 | 3623177 | ID=MS.gene051994.t1.exon1;Parent=MS.gene051994.t1 |
chr2.2 | CDS | 3623177 | 3624222 | 3623177 | ID=cds.MS.gene051994.t1;Parent=MS.gene051994.t1 |
chr2.2 | exon | 3620809 | 3622516 | 3620809 | ID=MS.gene051994.t1.exon2;Parent=MS.gene051994.t1 |
chr2.2 | CDS | 3620809 | 3622516 | 3620809 | ID=cds.MS.gene051994.t1;Parent=MS.gene051994.t1 |
chr2.2 | exon | 3620586 | 3620711 | 3620586 | ID=MS.gene051994.t1.exon3;Parent=MS.gene051994.t1 |
chr2.2 | CDS | 3620586 | 3620711 | 3620586 | ID=cds.MS.gene051994.t1;Parent=MS.gene051994.t1 |
chr2.2 | exon | 3620423 | 3620503 | 3620423 | ID=MS.gene051994.t1.exon4;Parent=MS.gene051994.t1 |
chr2.2 | CDS | 3620423 | 3620503 | 3620423 | ID=cds.MS.gene051994.t1;Parent=MS.gene051994.t1 |
chr2.2 | exon | 3620249 | 3620332 | 3620249 | ID=MS.gene051994.t1.exon5;Parent=MS.gene051994.t1 |
chr2.2 | CDS | 3620249 | 3620332 | 3620249 | ID=cds.MS.gene051994.t1;Parent=MS.gene051994.t1 |
Gene Sequence |
Protein sequence |