AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052526

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052526.t1 MTR_4g089135 95.977 348 9 3 1 347 1 344 0.0 682
MS.gene052526.t1 MTR_2g080010 52.785 377 122 11 1 346 1 352 3.27e-119 348
MS.gene052526.t1 MTR_2157s0010 55.253 257 86 6 13 258 6 244 3.65e-88 266
MS.gene052526.t1 MTR_7g085220 63.492 189 44 2 10 191 3 173 2.06e-84 259
MS.gene052526.t1 MTR_7g100990 52.500 240 91 4 14 251 10 228 1.53e-79 246
MS.gene052526.t1 MTR_2g093810 63.636 176 46 2 15 190 14 171 5.61e-78 242
MS.gene052526.t1 MTR_5g041940 62.500 176 46 2 14 189 2 157 1.35e-77 239
MS.gene052526.t1 MTR_4g081870 53.043 230 83 4 15 239 9 218 9.32e-77 237
MS.gene052526.t1 MTR_3g088110 66.292 178 36 3 14 190 6 160 1.04e-76 238
MS.gene052526.t1 MTR_2g079990 64.835 182 40 4 15 196 16 173 8.75e-75 235
MS.gene052526.t1 MTR_2g079990 62.963 189 60 4 15 196 16 201 2.25e-74 234
MS.gene052526.t1 MTR_8g094580 59.113 203 57 6 15 213 7 187 1.65e-73 229
MS.gene052526.t1 MTR_8g059170 64.835 182 42 4 15 196 14 173 2.70e-73 230
MS.gene052526.t1 MTR_3g096920 59.788 189 46 4 14 195 6 171 3.66e-70 221
MS.gene052526.t1 MTR_3g096920 54.106 207 66 5 14 195 6 208 1.02e-64 208
MS.gene052526.t1 MTR_5g040420 43.220 236 113 4 15 245 14 233 2.49e-62 204
MS.gene052526.t1 MTR_6g011860 52.688 186 70 4 15 198 15 184 1.03e-61 202
MS.gene052526.t1 MTR_8g467490 50.857 175 73 1 17 191 16 177 1.69e-61 202
MS.gene052526.t1 MTR_7g005280 54.237 177 54 3 14 190 14 163 4.31e-58 189
MS.gene052526.t1 MTR_2g078700 50.847 177 67 1 14 190 22 178 1.19e-57 191
MS.gene052526.t1 MTR_6g084430 49.724 181 65 3 15 195 5 159 3.61e-56 186
MS.gene052526.t1 MTR_4g108760 48.295 176 69 2 15 190 17 170 8.56e-55 183
MS.gene052526.t1 MTR_2g064090 50.000 176 63 5 15 188 6 158 8.62e-55 183
MS.gene052526.t1 MTR_3g109340 49.432 176 66 2 15 190 22 174 3.55e-54 182
MS.gene052526.t1 MTR_3g109340 48.876 178 63 2 15 190 22 173 6.08e-54 181
MS.gene052526.t1 MTR_3g435150 49.432 176 67 2 15 190 16 169 1.72e-53 178
MS.gene052526.t1 MTR_5g012080 43.578 218 87 7 14 224 6 194 8.15e-53 178
MS.gene052526.t1 MTR_1g008740 48.315 178 62 3 15 188 13 164 1.07e-52 177
MS.gene052526.t1 MTR_1g008740 48.315 178 62 3 15 188 27 178 1.22e-52 178
MS.gene052526.t1 MTR_6g012670 39.113 248 117 4 14 249 19 244 1.64e-52 176
MS.gene052526.t1 MTR_4g134460 47.090 189 72 4 12 197 51 214 1.92e-52 179
MS.gene052526.t1 MTR_3g064580 46.445 211 81 6 15 223 6 186 2.66e-52 183
MS.gene052526.t1 MTR_6g032770 48.571 175 70 2 15 189 18 172 2.81e-52 177
MS.gene052526.t1 MTR_3g070030 48.023 177 71 4 15 191 19 174 1.13e-51 175
MS.gene052526.t1 MTR_4g036030 42.056 214 92 5 14 221 6 193 1.29e-51 175
MS.gene052526.t1 MTR_5g076850 48.969 194 70 5 15 206 6 172 1.62e-51 181
MS.gene052526.t1 MTR_6g477900 47.429 175 66 3 15 187 6 156 5.39e-51 170
MS.gene052526.t1 MTR_1g069805 45.455 176 70 2 15 190 10 159 6.54e-51 171
MS.gene052526.t1 MTR_5g090970 47.126 174 74 3 17 187 20 178 9.45e-51 171
MS.gene052526.t1 MTR_2g062730 44.134 179 72 3 15 190 10 163 1.71e-50 172
MS.gene052526.t1 MTR_7g085260 42.194 237 90 7 15 225 17 232 1.82e-50 172
MS.gene052526.t1 MTR_5g021710 43.590 195 74 5 1 192 1 162 2.29e-50 172
MS.gene052526.t1 MTR_5g090970 47.126 174 73 4 17 187 20 177 1.93e-49 168
MS.gene052526.t1 MTR_5g014300 53.425 146 61 2 15 153 6 151 2.18e-49 169
MS.gene052526.t1 MTR_4g101680 43.005 193 77 4 14 203 6 168 2.47e-49 169
MS.gene052526.t1 MTR_7g097090 46.199 171 66 2 15 185 10 154 3.77e-49 167
MS.gene052526.t1 MTR_2g068880 47.340 188 81 5 17 197 24 200 7.22e-49 166
MS.gene052526.t1 MTR_4g035590 42.233 206 89 4 15 217 8 186 7.22e-49 167
MS.gene052526.t1 MTR_8g076110 44.693 179 70 4 15 190 6 158 9.48e-49 166
MS.gene052526.t1 MTR_2g068920 43.458 214 100 6 17 227 23 218 1.35e-48 165
MS.gene052526.t1 MTR_1g096430 44.041 193 74 5 5 194 2 163 1.54e-48 166
MS.gene052526.t1 MTR_4g098630 54.676 139 60 2 15 150 6 144 1.00e-47 164
MS.gene052526.t1 MTR_3g116070 56.589 129 55 1 15 142 23 151 2.49e-47 164
MS.gene052526.t1 MTR_2g064470 43.158 190 83 3 15 204 11 175 2.72e-47 162
MS.gene052526.t1 MTR_7g011130 45.930 172 84 2 18 189 22 184 2.94e-47 163
MS.gene052526.t1 MTR_8g099750 45.545 202 83 7 14 209 13 193 3.18e-47 159
MS.gene052526.t1 MTR_8g024480 41.711 187 91 5 6 189 6 177 3.85e-47 165
MS.gene052526.t1 MTR_7g011120 44.633 177 79 4 15 189 8 167 8.31e-46 158
MS.gene052526.t1 MTR_3g098810 46.629 178 75 3 15 190 14 173 7.13e-45 154
MS.gene052526.t1 MTR_4g075980 42.246 187 79 4 5 190 6 164 2.91e-44 154
MS.gene052526.t1 MTR_1g090720 45.763 177 76 3 15 189 42 200 3.04e-44 159
MS.gene052526.t1 MTR_8g094580 52.941 153 48 5 64 213 2 133 8.77e-44 151
MS.gene052526.t1 MTR_3g096140 42.857 175 74 4 15 187 7 157 2.50e-43 151
MS.gene052526.t1 MTR_3g098810 56.061 132 54 2 15 144 14 143 7.21e-43 147
MS.gene052526.t1 MTR_5g069030 46.369 179 70 4 15 191 25 179 8.40e-43 157
MS.gene052526.t1 MTR_1g097300 53.435 131 57 2 17 145 21 149 1.00e-42 156
MS.gene052526.t1 MTR_3g096140 42.857 175 74 4 15 187 7 157 1.76e-42 151
MS.gene052526.t1 MTR_1g090723 44.068 177 72 4 17 190 10 162 2.18e-41 153
MS.gene052526.t1 MTR_0036s0150 44.944 178 68 5 17 190 7 158 5.67e-41 150
MS.gene052526.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 9.53e-41 150
MS.gene052526.t1 MTR_3g093050 44.444 180 74 4 15 192 22 177 1.09e-40 151
MS.gene052526.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 2.52e-40 149
MS.gene052526.t1 MTR_1g090723 43.503 177 72 4 17 190 10 161 3.21e-40 150
MS.gene052526.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 8.55e-40 147
MS.gene052526.t1 MTR_2g086880 50.400 125 59 2 17 140 20 142 1.06e-39 148
MS.gene052526.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.28e-39 143
MS.gene052526.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 1.31e-39 145
MS.gene052526.t1 MTR_3g093040 41.899 179 78 4 15 191 108 262 1.42e-39 142
MS.gene052526.t1 MTR_8g063550 50.000 132 62 2 13 142 4 133 3.18e-39 144
MS.gene052526.t1 MTR_8g023840 50.725 138 63 4 11 144 6 142 2.30e-38 141
MS.gene052526.t1 MTR_4g094302 39.884 173 80 2 15 187 11 159 1.61e-37 133
MS.gene052526.t1 MTR_3g070040 40.000 175 74 4 19 189 12 159 2.94e-37 137
MS.gene052526.t1 MTR_4g094302 48.438 128 58 1 15 142 11 130 3.33e-37 131
MS.gene052526.t1 MTR_8g093580 48.485 132 64 2 13 142 4 133 4.01e-37 139
MS.gene052526.t1 MTR_4g052620 39.423 208 95 7 15 213 5 190 4.88e-36 131
MS.gene052526.t1 MTR_8g023860 46.923 130 65 3 14 140 11 139 5.74e-34 129
MS.gene052526.t1 MTR_8g023930 37.981 208 91 7 15 219 24 196 6.54e-34 130
MS.gene052526.t1 MTR_3g096140 39.375 160 71 4 30 187 1 136 7.78e-33 125
MS.gene052526.t1 MTR_2g086690 36.681 229 108 9 16 229 5 211 8.59e-33 122
MS.gene052526.t1 MTR_8g023900 45.714 140 67 4 13 144 186 324 1.10e-32 127
MS.gene052526.t1 MTR_8g023900 41.549 142 79 3 12 150 9 149 4.18e-31 122
MS.gene052526.t1 MTR_7g105170 36.111 180 91 5 15 188 4 165 4.80e-31 118
MS.gene052526.t1 MTR_8g093790 39.306 173 61 6 15 187 10 138 6.32e-27 105
MS.gene052526.t1 MTR_7g070140 47.748 111 54 1 68 174 17 127 2.02e-26 102
MS.gene052526.t1 MTR_8g023880 35.897 195 76 7 15 192 7 169 1.28e-25 103
MS.gene052526.t1 MTR_3g096400 36.000 175 88 8 15 186 7 160 4.71e-23 95.5
MS.gene052526.t1 MTR_7g083370 36.620 142 80 7 13 151 8 142 1.06e-19 84.7
MS.gene052526.t1 MTR_7g083330 35.294 136 82 4 15 148 18 149 2.68e-19 85.1
MS.gene052526.t1 MTR_7g083360 34.074 135 83 4 15 147 10 140 3.23e-19 83.6
MS.gene052526.t1 MTR_1g087190 62.500 48 15 2 17 62 7 53 1.27e-12 62.4
MS.gene052526.t1 MTR_7g070150 32.759 116 46 3 106 214 1 91 2.66e-12 62.8
MS.gene052526.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.59e-11 65.5
MS.gene052526.t1 MTR_8g102240 34.437 151 73 8 15 142 47 194 1.59e-11 65.5
MS.gene052526.t1 MTR_4g078875 34.211 152 76 8 13 145 46 192 2.88e-11 63.9
MS.gene052526.t1 MTR_8g069160 29.114 158 93 6 1 142 54 208 8.01e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052526.t1 AT1G61110 55.402 361 108 13 1 347 1 322 9.38e-113 331
MS.gene052526.t1 AT3G15510 50.515 388 123 13 1 346 1 361 3.76e-103 308
MS.gene052526.t1 AT3G04070 64.362 188 63 2 8 191 3 190 5.45e-84 259
MS.gene052526.t1 AT3G04070 63.102 187 51 3 8 191 3 174 3.17e-80 248
MS.gene052526.t1 AT1G69490 63.687 179 45 3 15 193 9 167 1.80e-79 244
MS.gene052526.t1 AT1G52880 52.797 286 105 7 19 292 21 288 3.13e-77 240
MS.gene052526.t1 AT1G01720 65.169 178 41 3 14 191 6 162 3.76e-75 234
MS.gene052526.t1 AT4G27410 64.972 177 38 4 15 191 14 166 5.55e-75 233
MS.gene052526.t1 AT5G08790 56.621 219 71 4 14 231 6 201 5.66e-75 233
MS.gene052526.t1 AT1G52890 58.824 204 49 5 15 218 14 182 3.21e-74 232
MS.gene052526.t1 AT3G15500 59.204 201 47 4 15 215 14 179 4.74e-74 232
MS.gene052526.t1 AT1G77450 64.571 175 38 3 14 187 9 160 5.54e-74 229
MS.gene052526.t1 AT5G63790 55.300 217 67 4 14 229 49 236 1.57e-73 230
MS.gene052526.t1 AT5G63790 55.300 217 67 4 14 229 59 246 1.79e-73 230
MS.gene052526.t1 AT4G27410 59.278 194 38 5 15 191 14 183 1.39e-70 223
MS.gene052526.t1 AT5G39820 52.717 184 80 3 17 197 22 201 4.25e-64 207
MS.gene052526.t1 AT1G26870 51.397 179 74 2 15 193 16 181 5.10e-61 201
MS.gene052526.t1 AT5G39610 48.936 188 73 3 12 198 17 182 2.91e-58 190
MS.gene052526.t1 AT5G18270 47.030 202 86 2 15 216 21 201 4.03e-58 191
MS.gene052526.t1 AT5G13180 54.802 177 54 3 14 190 13 163 8.06e-58 188
MS.gene052526.t1 AT5G53950 50.000 176 68 1 14 189 16 171 2.82e-57 190
MS.gene052526.t1 AT5G18270 46.040 202 88 2 15 216 21 201 4.11e-57 189
MS.gene052526.t1 AT3G18400 50.000 178 64 3 14 191 4 156 2.99e-56 186
MS.gene052526.t1 AT1G76420 48.851 174 66 2 15 188 22 172 3.77e-56 186
MS.gene052526.t1 AT2G24430 49.718 177 66 2 15 191 16 169 7.84e-56 185
MS.gene052526.t1 AT2G24430 49.718 177 66 2 15 191 16 169 7.84e-56 185
MS.gene052526.t1 AT5G61430 50.000 174 65 2 15 188 16 167 2.22e-55 184
MS.gene052526.t1 AT3G15170 48.000 175 71 1 15 189 20 174 5.08e-55 182
MS.gene052526.t1 AT3G29035 57.746 142 58 1 15 156 24 163 8.70e-55 182
MS.gene052526.t1 AT5G07680 50.000 174 65 2 15 188 3 154 9.02e-55 182
MS.gene052526.t1 AT5G07680 50.000 174 65 2 15 188 17 168 1.07e-54 182
MS.gene052526.t1 AT3G04060 49.438 178 69 2 15 192 20 176 1.65e-54 182
MS.gene052526.t1 AT3G03200 48.087 183 70 4 15 195 6 165 1.84e-53 183
MS.gene052526.t1 AT2G33480 50.273 183 56 5 14 192 14 165 3.44e-53 176
MS.gene052526.t1 AT2G02450 60.317 126 49 1 17 142 53 177 1.40e-52 178
MS.gene052526.t1 AT2G02450 60.317 126 49 1 17 142 53 177 1.56e-52 179
MS.gene052526.t1 AT2G33480 49.727 183 59 5 14 192 14 167 1.78e-52 174
MS.gene052526.t1 AT5G17260 45.876 194 74 6 15 205 6 171 5.58e-51 176
MS.gene052526.t1 AT1G12260 46.893 177 65 4 14 187 6 156 6.62e-51 173
MS.gene052526.t1 AT4G36160 45.789 190 69 6 1 187 1 159 9.16e-51 173
MS.gene052526.t1 AT4G36160 45.789 190 69 6 1 187 1 159 9.16e-51 173
MS.gene052526.t1 AT1G79580 45.506 178 68 3 15 189 17 168 9.50e-51 173
MS.gene052526.t1 AT1G79580 45.506 178 68 3 15 189 17 168 9.50e-51 173
MS.gene052526.t1 AT1G79580 45.506 178 68 3 15 189 17 168 9.50e-51 173
MS.gene052526.t1 AT1G79580 45.506 178 68 3 15 189 17 168 9.50e-51 173
MS.gene052526.t1 AT1G79580 45.506 178 68 3 15 189 17 168 9.50e-51 173
MS.gene052526.t1 AT4G36160 45.789 190 69 6 1 187 5 163 1.01e-50 173
MS.gene052526.t1 AT1G12260 46.893 177 65 4 14 187 6 156 1.01e-50 174
MS.gene052526.t1 AT1G65910 42.925 212 91 5 15 224 6 189 1.70e-50 178
MS.gene052526.t1 AT5G62380 46.354 192 69 6 14 198 6 170 1.88e-50 172
MS.gene052526.t1 AT5G62380 46.354 192 69 6 14 198 6 170 1.88e-50 172
MS.gene052526.t1 AT5G46590 56.738 141 53 3 7 145 3 137 4.28e-50 169
MS.gene052526.t1 AT5G46590 56.738 141 53 3 7 145 3 137 5.77e-50 169
MS.gene052526.t1 AT2G18060 45.355 183 67 5 8 187 6 158 8.55e-50 171
MS.gene052526.t1 AT2G18060 45.355 183 67 5 8 187 6 158 8.55e-50 171
MS.gene052526.t1 AT2G43000 46.409 181 74 4 17 197 20 177 1.36e-49 167
MS.gene052526.t1 AT1G71930 38.462 234 109 6 15 241 9 214 1.64e-49 169
MS.gene052526.t1 AT1G71930 38.462 234 109 6 15 241 9 214 1.64e-49 169
MS.gene052526.t1 AT4G17980 48.087 183 68 5 7 187 3 160 1.75e-49 167
MS.gene052526.t1 AT4G17980 48.087 183 68 5 7 187 3 160 2.33e-49 166
MS.gene052526.t1 AT5G66300 44.175 206 79 7 8 206 9 185 2.33e-49 167
MS.gene052526.t1 AT3G17730 46.286 175 68 4 15 187 6 156 2.87e-49 166
MS.gene052526.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.78e-48 168
MS.gene052526.t1 AT1G62700 44.022 184 74 4 15 195 7 164 1.78e-48 168
MS.gene052526.t1 AT1G56010 42.408 191 88 4 15 204 19 188 1.84e-48 166
MS.gene052526.t1 AT4G10350 46.067 178 69 4 15 189 9 162 2.28e-48 166
MS.gene052526.t1 AT3G12977 44.509 173 73 3 15 187 18 167 2.79e-48 164
MS.gene052526.t1 AT3G10480 46.032 189 76 4 3 189 15 179 3.21e-48 168
MS.gene052526.t1 AT1G33280 46.067 178 66 4 15 189 8 158 3.84e-48 164
MS.gene052526.t1 AT3G10480 46.032 189 77 4 3 189 15 180 5.08e-48 168
MS.gene052526.t1 AT1G54330 47.429 175 63 4 15 187 6 153 2.93e-47 162
MS.gene052526.t1 AT3G61910 39.352 216 105 6 14 215 10 213 4.05e-47 162
MS.gene052526.t1 AT3G10490 44.444 189 80 4 3 189 15 180 4.98e-47 159
MS.gene052526.t1 AT4G28530 42.564 195 70 3 15 193 10 178 1.32e-46 162
MS.gene052526.t1 AT1G32770 42.135 178 86 3 15 189 16 179 1.36e-46 162
MS.gene052526.t1 AT2G46770 41.146 192 99 4 1 189 2 182 1.40e-46 162
MS.gene052526.t1 AT1G32510 40.094 212 97 4 15 218 6 195 1.47e-46 160
MS.gene052526.t1 AT3G10500 45.506 178 71 3 15 190 9 162 3.16e-46 165
MS.gene052526.t1 AT3G10490 44.444 189 80 4 3 189 15 180 1.83e-45 161
MS.gene052526.t1 AT3G12910 48.045 179 77 6 17 191 23 189 1.59e-44 155
MS.gene052526.t1 AT5G04410 45.506 178 71 4 15 190 9 162 2.26e-44 160
MS.gene052526.t1 AT1G34180 51.389 144 66 2 1 142 2 143 5.40e-44 157
MS.gene052526.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.40e-43 159
MS.gene052526.t1 AT1G33060 46.154 182 72 5 15 194 24 181 1.57e-43 159
MS.gene052526.t1 AT2G17040 39.234 209 96 4 17 224 8 186 2.92e-43 151
MS.gene052526.t1 AT1G34180 51.389 144 66 2 1 142 2 143 2.97e-43 157
MS.gene052526.t1 AT1G34190 53.435 131 57 2 17 145 18 146 4.08e-43 157
MS.gene052526.t1 AT3G10480 39.189 222 77 4 3 189 15 213 9.53e-43 155
MS.gene052526.t1 AT1G34180 47.436 156 66 2 1 142 2 155 2.58e-42 153
MS.gene052526.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.30e-42 154
MS.gene052526.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.47e-42 154
MS.gene052526.t1 AT4G35580 46.591 176 66 5 15 187 9 159 3.61e-42 154
MS.gene052526.t1 AT2G27300 51.181 127 59 2 15 140 14 138 1.38e-41 148
MS.gene052526.t1 AT1G34180 47.436 156 66 2 1 142 2 155 1.41e-41 153
MS.gene052526.t1 AT5G24590 55.039 129 55 2 15 141 13 140 1.88e-41 150
MS.gene052526.t1 AT3G49530 51.128 133 62 2 15 145 13 144 1.03e-40 147
MS.gene052526.t1 AT3G49530 51.128 133 62 2 15 145 13 144 1.84e-40 148
MS.gene052526.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.35e-40 148
MS.gene052526.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.35e-40 148
MS.gene052526.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.35e-40 148
MS.gene052526.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.35e-40 148
MS.gene052526.t1 AT5G09330 51.908 131 59 2 14 142 5 133 2.35e-40 148
MS.gene052526.t1 AT5G64060 41.143 175 77 4 15 187 6 156 1.35e-39 143
MS.gene052526.t1 AT5G64530 41.808 177 83 3 15 191 3 159 7.39e-39 137
MS.gene052526.t1 AT3G44290 46.875 128 65 2 17 143 16 141 1.90e-37 134
MS.gene052526.t1 AT5G22290 43.165 139 76 2 3 140 9 145 3.35e-37 137
MS.gene052526.t1 AT1G32870 47.191 178 68 4 15 190 10 163 6.68e-37 139
MS.gene052526.t1 AT1G32870 47.191 178 68 4 15 190 10 163 7.44e-37 139
MS.gene052526.t1 AT3G44290 46.875 128 65 2 17 143 16 141 8.19e-37 135
MS.gene052526.t1 AT1G32870 47.191 178 68 4 15 190 46 199 1.43e-36 139
MS.gene052526.t1 AT5G64530 49.219 128 53 2 15 142 3 118 1.45e-35 127
MS.gene052526.t1 AT5G04395 39.610 154 79 2 3 142 16 169 5.15e-34 124
MS.gene052526.t1 AT5G61430 47.200 125 44 2 64 188 2 104 1.52e-32 122
MS.gene052526.t1 AT3G44350 35.160 219 103 9 14 222 4 193 5.79e-32 120
MS.gene052526.t1 AT1G56010 41.135 141 62 3 64 204 2 121 1.09e-30 117
MS.gene052526.t1 AT3G04420 44.186 129 66 3 16 140 4 130 1.94e-29 115
MS.gene052526.t1 AT3G12977 44.355 124 46 3 64 187 14 114 4.04e-29 112
MS.gene052526.t1 AT3G04420 44.186 129 66 3 16 140 4 130 4.60e-29 115
MS.gene052526.t1 AT3G44350 40.876 137 71 4 14 143 4 137 4.95e-29 110
MS.gene052526.t1 AT5G22380 36.667 180 87 6 18 191 8 166 8.49e-29 112
MS.gene052526.t1 AT4G28530 45.312 128 54 1 15 126 10 137 2.10e-28 112
MS.gene052526.t1 AT4G01550 44.186 129 68 3 18 142 7 135 2.14e-28 115
MS.gene052526.t1 AT2G33480 45.736 129 40 4 68 192 8 110 1.10e-27 108
MS.gene052526.t1 AT1G02230 42.308 130 67 4 16 140 4 130 1.90e-27 110
MS.gene052526.t1 AT4G10350 45.902 122 42 3 68 189 18 115 2.03e-27 109
MS.gene052526.t1 AT4G01520 43.182 132 70 4 16 142 5 136 6.19e-25 103
MS.gene052526.t1 AT4G01540 43.846 130 68 4 18 142 7 136 2.46e-24 103
MS.gene052526.t1 AT4G01540 43.846 130 68 4 18 142 7 136 3.74e-24 102
MS.gene052526.t1 AT1G02250 41.538 130 68 4 16 140 4 130 4.66e-24 101
MS.gene052526.t1 AT4G01540 43.846 130 68 4 18 142 7 136 5.37e-24 102
MS.gene052526.t1 AT4G01540 43.846 130 68 4 18 142 7 136 6.77e-24 102
MS.gene052526.t1 AT1G02220 40.310 129 68 4 16 140 4 127 1.24e-22 98.2
MS.gene052526.t1 AT5G14000 36.923 130 76 3 15 142 15 140 2.04e-20 87.0
MS.gene052526.t1 AT5G14000 36.923 130 76 3 15 142 15 140 4.09e-20 87.4
MS.gene052526.t1 AT1G01010 38.060 134 69 6 18 140 6 136 2.23e-19 89.0
MS.gene052526.t1 AT2G43000 41.322 121 48 4 77 197 2 99 2.91e-19 85.1
MS.gene052526.t1 AT3G55210 32.124 193 89 8 15 193 11 175 1.31e-16 79.3
MS.gene052526.t1 AT3G56530 35.659 129 78 3 15 140 52 178 1.35e-16 79.7
MS.gene052526.t1 AT5G50820 33.835 133 78 4 14 144 16 140 2.29e-16 77.0
MS.gene052526.t1 AT3G10490 39.216 102 39 3 88 189 2 80 2.96e-15 76.3
MS.gene052526.t1 AT3G10490 39.216 102 39 3 88 189 2 80 2.96e-15 76.3
MS.gene052526.t1 AT2G18060 38.947 95 32 3 93 187 2 70 2.33e-14 72.8
MS.gene052526.t1 AT3G04430 36.364 132 70 5 21 140 6 135 1.48e-13 68.9
MS.gene052526.t1 AT1G28470 31.973 147 79 7 13 142 75 217 8.07e-13 68.9
MS.gene052526.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.13e-12 68.2
MS.gene052526.t1 AT5G56620 31.613 155 76 6 15 142 43 194 2.49e-12 67.8
MS.gene052526.t1 AT5G14490 30.435 161 86 7 5 145 48 202 2.87e-12 67.4
MS.gene052526.t1 AT5G14490 30.435 161 86 7 5 145 45 199 3.09e-12 67.4
MS.gene052526.t1 AT1G25580 34.266 143 75 7 13 142 56 192 3.11e-12 67.8
MS.gene052526.t1 AT5G14490 30.435 161 86 7 5 145 48 202 3.57e-12 67.0
MS.gene052526.t1 AT4G29230 34.416 154 74 8 15 144 48 198 4.35e-12 67.4
MS.gene052526.t1 AT4G29230 34.416 154 74 8 15 144 47 197 4.38e-12 67.4
MS.gene052526.t1 AT5G56620 31.613 155 76 6 15 142 43 194 4.67e-12 67.0
MS.gene052526.t1 AT5G14490 30.435 161 86 7 5 145 45 199 5.94e-12 65.9
MS.gene052526.t1 AT4G29230 34.416 154 74 8 15 144 48 198 8.70e-12 66.2

Find 79 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTCCGGACATAAAT+TGG 0.154420 4.3:-23396144 MS.gene052526:CDS
TTTCATCAAAATTCAATTCT+TGG 0.173199 4.3:-23396199 MS.gene052526:CDS
CATGCCAAGGCCACTCTTAA+TGG 0.200176 4.3:-23396584 MS.gene052526:CDS
CCCAATAGGGCTGCTACTTC+TGG 0.200373 4.3:-23397200 MS.gene052526:CDS
TTTATAGGTAAAGCAAGTTT+TGG 0.250824 4.3:-23397281 MS.gene052526:intron
CAAAAGGAGTTAAAACTAAT+TGG 0.262200 4.3:-23397076 MS.gene052526:CDS
GAATTCTTCTTGTTATTGTT+TGG 0.278889 4.3:+23396963 None:intergenic
CTATTGGGTCTTGCTCCATT+TGG 0.292483 4.3:+23397215 None:intergenic
CCCAGAAGTAGCAGCCCTAT+TGG 0.308982 4.3:+23397199 None:intergenic
TAAATGCATCATCACAGTTT+TGG 0.311946 4.3:-23396357 MS.gene052526:CDS
TATTGGGTCTTGCTCCATTT+GGG 0.322648 4.3:+23397216 None:intergenic
GCATTTAGTGCACGTTTCAT+AGG 0.337891 4.3:+23396373 None:intergenic
AATTCAATTCTTGGATCTGT+TGG 0.346734 4.3:-23396190 MS.gene052526:CDS
TCTTCAAGCAAACGGTTTCA+TGG 0.349803 4.3:-23396307 MS.gene052526:CDS
AATGATCACGGAATGCAAAA+TGG 0.381179 4.3:-23396445 MS.gene052526:CDS
ATCGGAAACCTGGTGGTAGG+TGG 0.399421 4.3:+23397573 None:intergenic
TTCTTCTTGTTATTGTTTGG+AGG 0.403734 4.3:+23396966 None:intergenic
TCTTCAAGAAGCACAAGTTA+TGG 0.409732 4.3:-23396508 MS.gene052526:CDS
TGATCCATTAAGAGTGGCCT+TGG 0.412912 4.3:+23396580 None:intergenic
TTCCCATCAGATGTTAATAT+AGG 0.417975 4.3:+23397149 None:intergenic
CCAGAAGTAGCAGCCCTATT+GGG 0.428179 4.3:+23397200 None:intergenic
CTTCATCGGTGGGGTGGAAT+CGG 0.437306 4.3:+23397555 None:intergenic
TTCGTACTTGGGAGCTCCCA+TGG 0.440454 4.3:+23397443 None:intergenic
TTTCATGGAGATCTTAATAG+TGG 0.440666 4.3:-23396292 MS.gene052526:CDS
GGGCTGCTACTTCTGGGTAT+TGG 0.442139 4.3:-23397193 MS.gene052526:CDS
AATGATGACAATTTCTTCGA+TGG 0.445563 4.3:-23396478 MS.gene052526:CDS
AACTAGTTCCAATTTATGTC+CGG 0.449473 4.3:+23396136 None:intergenic
GCTTCTTGAAGATGAATGTT+TGG 0.449692 4.3:+23396519 None:intergenic
CCAATAGGGCTGCTACTTCT+GGG 0.454581 4.3:-23397199 MS.gene052526:CDS
ATCTCTGCTATGATGGCTAC+TGG 0.455487 4.3:+23397485 None:intergenic
AAGCCTATATTAACATCTGA+TGG 0.457224 4.3:-23397152 MS.gene052526:CDS
GAGGCAACAATTTCAACTTC+CGG 0.462175 4.3:-23396155 MS.gene052526:CDS
TGGAATGAAACAGGGTCACC+AGG 0.466947 4.3:-23396337 MS.gene052526:CDS
AAATGGAGCAAGACCCAATA+GGG 0.470103 4.3:-23397213 MS.gene052526:CDS
CAAATGGAGCAAGACCCAAT+AGG 0.479465 4.3:-23397214 MS.gene052526:CDS
GGAAACCTGGTGGTAGGTGG+GGG 0.480157 4.3:+23397576 None:intergenic
TCTGGGTATTGGAAAGCTAC+TGG 0.487868 4.3:-23397182 MS.gene052526:CDS
ATTGGATCATGCATGAGTAT+AGG 0.492325 4.3:-23397058 MS.gene052526:CDS
CATTTAGTGCACGTTTCATA+GGG 0.495376 4.3:+23396374 None:intergenic
GGTCATCTTCTTCAAGCAAA+CGG 0.495966 4.3:-23396315 MS.gene052526:CDS
TCTGATGGGAATCAGAAAGT+TGG 0.499516 4.3:-23397137 MS.gene052526:CDS
GTGGGGTGGAATCGGAAACC+TGG 0.501175 4.3:+23397563 None:intergenic
CGGAAACCTGGTGGTAGGTG+GGG 0.504339 4.3:+23397575 None:intergenic
TCGGAAACCTGGTGGTAGGT+GGG 0.504413 4.3:+23397574 None:intergenic
GCTATGATGGCTACTGGAAG+TGG 0.505754 4.3:+23397491 None:intergenic
ATTCTTGGATCTGTTGGAGA+TGG 0.516290 4.3:-23396184 MS.gene052526:CDS
GAGATCAATCTCTGCTATGA+TGG 0.523237 4.3:+23397478 None:intergenic
AAGTTGTGCTTGGTGGAAGC+TGG 0.530868 4.3:+23396221 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.531070 4.3:-23397460 MS.gene052526:CDS
AGGGATAGAAAATACCCAAA+TGG 0.534980 4.3:-23397230 MS.gene052526:CDS
TATGGAGGGAAGCCACCAAA+AGG 0.535327 4.3:-23397092 MS.gene052526:CDS
TGTGCATATACATACCCTTA+GGG 0.545490 4.3:+23396941 None:intergenic
GGTTGTGACACAAACTCAAA+GGG 0.556107 4.3:-23396424 MS.gene052526:CDS
TGATGAAAAGTTGTGCTTGG+TGG 0.557736 4.3:+23396214 None:intergenic
ACTACGAGTTCTTCATCGGT+GGG 0.558882 4.3:+23397545 None:intergenic
TTGTTTGGAGGATGATCAGA+AGG 0.562065 4.3:+23396978 None:intergenic
GGATGATCAGAAGGCAGAGG+AGG 0.572911 4.3:+23396987 None:intergenic
GGAGGATGATCAGAAGGCAG+AGG 0.572927 4.3:+23396984 None:intergenic
ATAACAAGAAGAATTCCCTA+AGG 0.573041 4.3:-23396956 MS.gene052526:CDS
CGAGTTCTTCATCGGTGGGG+TGG 0.573171 4.3:+23397549 None:intergenic
TCGTACTTGGGAGCTCCCAT+GGG 0.577363 4.3:+23397444 None:intergenic
TGGTTGTGACACAAACTCAA+AGG 0.577669 4.3:-23396425 MS.gene052526:CDS
GGAATCGGAAACCTGGTGGT+AGG 0.585801 4.3:+23397570 None:intergenic
CATTAAGAGTGGCCTTGGCA+TGG 0.590428 4.3:+23396585 None:intergenic
GTGAACTACGAGTTCTTCAT+CGG 0.590635 4.3:+23397541 None:intergenic
AGCCTATATTAACATCTGAT+GGG 0.592875 4.3:-23397151 MS.gene052526:CDS
AACTACGAGTTCTTCATCGG+TGG 0.606004 4.3:+23397544 None:intergenic
TGGAATAAGTAGCAATGCTG+AGG 0.609239 4.3:-23396272 MS.gene052526:CDS
GCAACAGTAGCACCATGCCA+AGG 0.616723 4.3:-23396597 MS.gene052526:CDS
TCTCTACAAATTCGACCCAT+GGG 0.621113 4.3:-23397459 MS.gene052526:CDS
GGAATCTTAGCAAATGATCA+CGG 0.629624 4.3:-23396457 MS.gene052526:CDS
TAACAAGAAGAATTCCCTAA+GGG 0.639219 4.3:-23396955 MS.gene052526:intron
CTACGAGTTCTTCATCGGTG+GGG 0.640544 4.3:+23397546 None:intergenic
CTGTTGGAGATGGTGTAATG+AGG 0.645707 4.3:-23396174 MS.gene052526:CDS
TCATATTGATCCATTAAGAG+TGG 0.647276 4.3:+23396574 None:intergenic
GGAATGAAACAGGGTCACCA+GGG 0.654300 4.3:-23396336 MS.gene052526:CDS
GGGTGGAATCGGAAACCTGG+TGG 0.682142 4.3:+23397566 None:intergenic
TTGCTTGAAGAAGATGACCC+TGG 0.699438 4.3:+23396319 None:intergenic
TGTGACACAAACTCAAAGGG+TGG 0.762560 4.3:-23396421 MS.gene052526:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCTTTAATATAAAAACA+TGG + chr4.3:23397063-23397082 None:intergenic 10.0%
!!! CTCTTTTTTTTTTTTTTTAT+AGG - chr4.3:23396453-23396472 MS.gene052526:CDS 10.0%
!!! TTAACATTTTTTTATTGTAT+TGG - chr4.3:23397084-23397103 MS.gene052526:CDS 10.0%
!! AAAAAAAAAAGAGAAAAAAC+AGG + chr4.3:23396446-23396465 None:intergenic 15.0%
!! TCATAATAAATAATTGAACA+TGG - chr4.3:23396860-23396879 MS.gene052526:intron 15.0%
!!! TTTTTTTATTGTATTGGTTT+TGG - chr4.3:23397090-23397109 MS.gene052526:CDS 15.0%
!! AAAATTTCATATGCAAAACA+TGG + chr4.3:23396397-23396416 None:intergenic 20.0%
!! TTTCATCAAAATTCAATTCT+TGG - chr4.3:23397550-23397569 MS.gene052526:CDS 20.0%
!!! GTTTTGTTGCATATTATTAT+AGG + chr4.3:23397209-23397228 None:intergenic 20.0%
! AAACATGGAACATAAAATCT+AGG + chr4.3:23396382-23396401 None:intergenic 25.0%
! AAATGGATGAAAAGATGAAA+TGG + chr4.3:23396345-23396364 None:intergenic 25.0%
! AATGAATATGCAATGAAACA+CGG + chr4.3:23397037-23397056 None:intergenic 25.0%
! AATGGATGAAAAGATGAAAT+GGG + chr4.3:23396344-23396363 None:intergenic 25.0%
! ATATGCATAGTTATGAAACA+CGG - chr4.3:23396955-23396974 MS.gene052526:intron 25.0%
! CAAAAGGAGTTAAAACTAAT+TGG - chr4.3:23396673-23396692 MS.gene052526:intron 25.0%
! GAAAAAACAGGACAATATTT+CGG + chr4.3:23396434-23396453 None:intergenic 25.0%
! TATTATGAAACAAATGCACA+TGG + chr4.3:23396848-23396867 None:intergenic 25.0%
!! AGTTTTTGAACTTGCATTAT+AGG + chr4.3:23396742-23396761 None:intergenic 25.0%
!! TTATAGGTAAAGCAAGTTTT+GGG - chr4.3:23396469-23396488 MS.gene052526:CDS 25.0%
!! TTTATAGGTAAAGCAAGTTT+TGG - chr4.3:23396468-23396487 MS.gene052526:CDS 25.0%
!!! AAGAAAGCACTTGTTTTTTA+TGG - chr4.3:23396639-23396658 MS.gene052526:intron 25.0%
!!! CAATTAGTTTTAACTCCTTT+TGG + chr4.3:23396675-23396694 None:intergenic 25.0%
!!! CGCTAATAATTTTAGAAAAC+CGG - chr4.3:23397004-23397023 MS.gene052526:CDS 25.0%
!!! CTAATAATTTTAGAAAACCG+GGG - chr4.3:23397006-23397025 MS.gene052526:CDS 25.0%
!!! GAATTCTTCTTGTTATTGTT+TGG + chr4.3:23396789-23396808 None:intergenic 25.0%
!!! GCTAATAATTTTAGAAAACC+GGG - chr4.3:23397005-23397024 MS.gene052526:CDS 25.0%
!!! TGTTGCTTTTCTTGTATATT+CGG + chr4.3:23397138-23397157 None:intergenic 25.0%
AAGATCAGACCATTCAAAAA+AGG + chr4.3:23396914-23396933 None:intergenic 30.0%
AAGCCTATATTAACATCTGA+TGG - chr4.3:23396597-23396616 MS.gene052526:CDS 30.0%
AATGATGACAATTTCTTCGA+TGG - chr4.3:23397271-23397290 MS.gene052526:CDS 30.0%
AATTCAATTCTTGGATCTGT+TGG - chr4.3:23397559-23397578 MS.gene052526:CDS 30.0%
AGCCTATATTAACATCTGAT+GGG - chr4.3:23396598-23396617 MS.gene052526:CDS 30.0%
ATAACAAGAAGAATTCCCTA+AGG - chr4.3:23396793-23396812 MS.gene052526:intron 30.0%
ATGGATGAAAAGATGAAATG+GGG + chr4.3:23396343-23396362 None:intergenic 30.0%
TAACAAGAAGAATTCCCTAA+GGG - chr4.3:23396794-23396813 MS.gene052526:intron 30.0%
TCATATTGATCCATTAAGAG+TGG + chr4.3:23397178-23397197 None:intergenic 30.0%
TGTGAAAAAGTTTCGTACTT+GGG + chr4.3:23396320-23396339 None:intergenic 30.0%
TTCCCATCAGATGTTAATAT+AGG + chr4.3:23396603-23396622 None:intergenic 30.0%
TTTCATGGAGATCTTAATAG+TGG - chr4.3:23397457-23397476 MS.gene052526:CDS 30.0%
! GAACATAAAATCTAGGATGT+AGG + chr4.3:23396375-23396394 None:intergenic 30.0%
! TAAATGCATCATCACAGTTT+TGG - chr4.3:23397392-23397411 MS.gene052526:intron 30.0%
! TATAGGTAAAGCAAGTTTTG+GGG - chr4.3:23396470-23396489 MS.gene052526:CDS 30.0%
! TTTTGATGAAAAGTTGTGCT+TGG + chr4.3:23397541-23397560 None:intergenic 30.0%
!! TTCTTCTTGTTATTGTTTGG+AGG + chr4.3:23396786-23396805 None:intergenic 30.0%
!!! AAAGCACTTGTTTTTTATGG+AGG - chr4.3:23396642-23396661 MS.gene052526:intron 30.0%
!!! AAGCACTTGTTTTTTATGGA+GGG - chr4.3:23396643-23396662 MS.gene052526:intron 30.0%
!!! TTAGTTTTAACTCCTTTTGG+TGG + chr4.3:23396672-23396691 None:intergenic 30.0%
AATGATCACGGAATGCAAAA+TGG - chr4.3:23397304-23397323 MS.gene052526:intron 35.0%
AGGATGTAGGTTTGAGTAAA+TGG + chr4.3:23396362-23396381 None:intergenic 35.0%
AGGGATAGAAAATACCCAAA+TGG - chr4.3:23396519-23396538 MS.gene052526:CDS 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr4.3:23396691-23396710 MS.gene052526:intron 35.0%
CATTTAGTGCACGTTTCATA+GGG + chr4.3:23397378-23397397 None:intergenic 35.0%
GCTTCTTGAAGATGAATGTT+TGG + chr4.3:23397233-23397252 None:intergenic 35.0%
GGAATCTTAGCAAATGATCA+CGG - chr4.3:23397292-23397311 MS.gene052526:intron 35.0%
GTGTGAAAAAGTTTCGTACT+TGG + chr4.3:23396321-23396340 None:intergenic 35.0%
TGTGCATATACATACCCTTA+GGG + chr4.3:23396811-23396830 None:intergenic 35.0%
TTCAACTTCCGGACATAAAT+TGG - chr4.3:23397605-23397624 MS.gene052526:CDS 35.0%
! TCTTCAAGAAGCACAAGTTA+TGG - chr4.3:23397241-23397260 MS.gene052526:CDS 35.0%
! TTGGGTATTTTCTATCCCTT+GGG + chr4.3:23396518-23396537 None:intergenic 35.0%
! TTTGGGTATTTTCTATCCCT+TGG + chr4.3:23396519-23396538 None:intergenic 35.0%
!! ATAATTTTAGAAAACCGGGG+AGG - chr4.3:23397009-23397028 MS.gene052526:CDS 35.0%
!! TAATTTTAGAAAACCGGGGA+GGG - chr4.3:23397010-23397029 MS.gene052526:CDS 35.0%
!!! CACAGTTTTGGAATGAAACA+GGG - chr4.3:23397404-23397423 MS.gene052526:intron 35.0%
!!! CTCTCTGTTCCTTTTTTGAA+TGG - chr4.3:23396902-23396921 MS.gene052526:intron 35.0%
!!! TCACAGTTTTGGAATGAAAC+AGG - chr4.3:23397403-23397422 MS.gene052526:intron 35.0%
AAATGGAGCAAGACCCAATA+GGG - chr4.3:23396536-23396555 MS.gene052526:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr4.3:23396289-23396308 MS.gene052526:CDS 40.0%
ATTCTTGGATCTGTTGGAGA+TGG - chr4.3:23397565-23397584 MS.gene052526:CDS 40.0%
GAGATCAATCTCTGCTATGA+TGG + chr4.3:23396274-23396293 None:intergenic 40.0%
GAGGCAACAATTTCAACTTC+CGG - chr4.3:23397594-23397613 MS.gene052526:CDS 40.0%
GCATTTAGTGCACGTTTCAT+AGG + chr4.3:23397379-23397398 None:intergenic 40.0%
GGTCATCTTCTTCAAGCAAA+CGG - chr4.3:23397434-23397453 MS.gene052526:intron 40.0%
GGTTGTGACACAAACTCAAA+GGG - chr4.3:23397325-23397344 MS.gene052526:intron 40.0%
GTGAACTACGAGTTCTTCAT+CGG + chr4.3:23396211-23396230 None:intergenic 40.0%
GTGTGCATATACATACCCTT+AGG + chr4.3:23396812-23396831 None:intergenic 40.0%
TATTGGGTCTTGCTCCATTT+GGG + chr4.3:23396536-23396555 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr4.3:23396290-23396309 MS.gene052526:CDS 40.0%
TCTGATGGGAATCAGAAAGT+TGG - chr4.3:23396612-23396631 MS.gene052526:CDS 40.0%
TCTTCAAGCAAACGGTTTCA+TGG - chr4.3:23397442-23397461 MS.gene052526:intron 40.0%
TGATGAAAAGTTGTGCTTGG+TGG + chr4.3:23397538-23397557 None:intergenic 40.0%
TGGAATAAGTAGCAATGCTG+AGG - chr4.3:23397477-23397496 MS.gene052526:CDS 40.0%
TGGTTGTGACACAAACTCAA+AGG - chr4.3:23397324-23397343 MS.gene052526:intron 40.0%
TTGTTTGGAGGATGATCAGA+AGG + chr4.3:23396774-23396793 None:intergenic 40.0%
! CAGAAGCAGCTTTTCTTTTG+AGG + chr4.3:23396236-23396255 None:intergenic 40.0%
!!! GGTTTTGGAGCTTGATGATT+GGG - chr4.3:23397105-23397124 MS.gene052526:CDS 40.0%
!!! TGGTTTTGGAGCTTGATGAT+TGG - chr4.3:23397104-23397123 MS.gene052526:CDS 40.0%
AACTACGAGTTCTTCATCGG+TGG + chr4.3:23396208-23396227 None:intergenic 45.0%
ACTACGAGTTCTTCATCGGT+GGG + chr4.3:23396207-23396226 None:intergenic 45.0%
ATCTCTGCTATGATGGCTAC+TGG + chr4.3:23396267-23396286 None:intergenic 45.0%
CAAATGGAGCAAGACCCAAT+AGG - chr4.3:23396535-23396554 MS.gene052526:CDS 45.0%
CTATTGGGTCTTGCTCCATT+TGG + chr4.3:23396537-23396556 None:intergenic 45.0%
CTGTTGGAGATGGTGTAATG+AGG - chr4.3:23397575-23397594 MS.gene052526:CDS 45.0%
TGATCCATTAAGAGTGGCCT+TGG + chr4.3:23397172-23397191 None:intergenic 45.0%
TGTGACACAAACTCAAAGGG+TGG - chr4.3:23397328-23397347 MS.gene052526:intron 45.0%
TTGCTTGAAGAAGATGACCC+TGG + chr4.3:23397433-23397452 None:intergenic 45.0%
!! TCTGGGTATTGGAAAGCTAC+TGG - chr4.3:23396567-23396586 MS.gene052526:CDS 45.0%
!!! AGTGGTACTTTTTCAGCCCA+AGG - chr4.3:23396499-23396518 MS.gene052526:CDS 45.0%
!!! CAAGTTTTGGGGAACAAGAG+TGG - chr4.3:23396481-23396500 MS.gene052526:CDS 45.0%
!!! GTGGTACTTTTTCAGCCCAA+GGG - chr4.3:23396500-23396519 MS.gene052526:CDS 45.0%
CATGCCAAGGCCACTCTTAA+TGG - chr4.3:23397165-23397184 MS.gene052526:CDS 50.0%
CCAGAAGTAGCAGCCCTATT+GGG + chr4.3:23396552-23396571 None:intergenic 50.0%
CTACGAGTTCTTCATCGGTG+GGG + chr4.3:23396206-23396225 None:intergenic 50.0%
GCTATGATGGCTACTGGAAG+TGG + chr4.3:23396261-23396280 None:intergenic 50.0%
GGAATGAAACAGGGTCACCA+GGG - chr4.3:23397413-23397432 MS.gene052526:intron 50.0%
TATGGAGGGAAGCCACCAAA+AGG - chr4.3:23396657-23396676 MS.gene052526:intron 50.0%
TGGAATGAAACAGGGTCACC+AGG - chr4.3:23397412-23397431 MS.gene052526:intron 50.0%
! AAGTTGTGCTTGGTGGAAGC+TGG + chr4.3:23397531-23397550 None:intergenic 50.0%
! CATTAAGAGTGGCCTTGGCA+TGG + chr4.3:23397167-23397186 None:intergenic 50.0%
! CCAATAGGGCTGCTACTTCT+GGG - chr4.3:23396550-23396569 MS.gene052526:CDS 50.0%
AATGAAACACGGACCCTCCC+CGG + chr4.3:23397026-23397045 None:intergenic 55.0%
ATCGGAAACCTGGTGGTAGG+TGG + chr4.3:23396179-23396198 None:intergenic 55.0%
CCCAGAAGTAGCAGCCCTAT+TGG + chr4.3:23396553-23396572 None:intergenic 55.0%
CTTCATCGGTGGGGTGGAAT+CGG + chr4.3:23396197-23396216 None:intergenic 55.0%
GCAACAGTAGCACCATGCCA+AGG - chr4.3:23397152-23397171 MS.gene052526:CDS 55.0%
GGAATCGGAAACCTGGTGGT+AGG + chr4.3:23396182-23396201 None:intergenic 55.0%
GGAGGATGATCAGAAGGCAG+AGG + chr4.3:23396768-23396787 None:intergenic 55.0%
GGATGATCAGAAGGCAGAGG+AGG + chr4.3:23396765-23396784 None:intergenic 55.0%
TCGGAAACCTGGTGGTAGGT+GGG + chr4.3:23396178-23396197 None:intergenic 55.0%
TCGTACTTGGGAGCTCCCAT+GGG + chr4.3:23396308-23396327 None:intergenic 55.0%
TTCGTACTTGGGAGCTCCCA+TGG + chr4.3:23396309-23396328 None:intergenic 55.0%
! CCCAATAGGGCTGCTACTTC+TGG - chr4.3:23396549-23396568 MS.gene052526:CDS 55.0%
! GGGCTGCTACTTCTGGGTAT+TGG - chr4.3:23396556-23396575 MS.gene052526:CDS 55.0%
CGAGTTCTTCATCGGTGGGG+TGG + chr4.3:23396203-23396222 None:intergenic 60.0%
CGGAAACCTGGTGGTAGGTG+GGG + chr4.3:23396177-23396196 None:intergenic 60.0%
GGAAACCTGGTGGTAGGTGG+GGG + chr4.3:23396176-23396195 None:intergenic 60.0%
GGGTGGAATCGGAAACCTGG+TGG + chr4.3:23396186-23396205 None:intergenic 60.0%
GTGGGGTGGAATCGGAAACC+TGG + chr4.3:23396189-23396208 None:intergenic 60.0%
CCACACCCCCACCTACCACC+AGG - chr4.3:23396168-23396187 MS.gene052526:CDS 70.0%
CCTGGTGGTAGGTGGGGGTG+TGG + chr4.3:23396171-23396190 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 23396138 23397633 23396138 ID=MS.gene052526
chr4.3 mRNA 23396138 23397633 23396138 ID=MS.gene052526.t1;Parent=MS.gene052526
chr4.3 exon 23397450 23397633 23397450 ID=MS.gene052526.t1.exon1;Parent=MS.gene052526.t1
chr4.3 CDS 23397450 23397633 23397450 ID=cds.MS.gene052526.t1;Parent=MS.gene052526.t1
chr4.3 exon 23396956 23397296 23396956 ID=MS.gene052526.t1.exon2;Parent=MS.gene052526.t1
chr4.3 CDS 23396956 23397296 23396956 ID=cds.MS.gene052526.t1;Parent=MS.gene052526.t1
chr4.3 exon 23396138 23396656 23396138 ID=MS.gene052526.t1.exon3;Parent=MS.gene052526.t1
chr4.3 CDS 23396138 23396656 23396138 ID=cds.MS.gene052526.t1;Parent=MS.gene052526.t1
Gene Sequence

>MS.gene052526

ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGTTTCCGATTCCACCCCACCGATGAAGAACTCGTAGTTCACTACCTCAAAAGAAAAGCTGCTTCTGCACCACTTCCAGTAGCCATCATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAGCTCCCAAGTACGAAACTTTTTCACACCCCATTTCATCTTTTCATCCATTTACTCAAACCTACATCCTAGATTTTATGTTCCATGTTTTGCATATGAAATTTTGAACATGTTTTAATCCGAAATATTGTCCTGTTTTTTCTCTTTTTTTTTTTTTTTATAGGTAAAGCAAGTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGAGCAAGACCCAATAGGGCTGCTACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGAGTTAAAACTAATTGGATCATGCATGAGTATAGGCTCATCACTGATTATAATCATAATTCCTATAATGCAAGTTCAAAAACTCCTCCTCTGCCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCCCTAAGGGTATGTATATGCACACACATAATTGCATGCCATGTGCATTTGTTTCATAATAAATAATTGAACATGGACACACTGAATTATATCTTCTCTCTGTTCCTTTTTTGAATGGTCTGATCTTTAAAGTATAATTTTGTTAATCATATGCATAGTTATGAAACACGGATACTGACACGACAATGACACTGACACGCTAATAATTTTAGAAAACCGGGGAGGGTCCGTGTTTCATTGCATATTCATTAAACCATGTTTTTATATTAAAGAAATATTAACATTTTTTTATTGTATTGGTTTTGGAGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACTCTTAATGGATCAATATGATGATCAAACCTATAATAATATGCAACAAAACTCCAAACATTCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTCGATGGAATCTTAGCAAATGATCACGGAATGCAAAATGGTTGTGACACAAACTCAAAGGGTGGTGACAATAATAATGAAACATTATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGGTCACCAGGGTCATCTTCTTCAAGCAAACGGTTTCATGGAGATCTTAATAGTGGAATAAGTAGCAATGCTGAGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGCACAACTTTTCATCAAAATTCAATTCTTGGATCTGTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG
Protein sequence

>MS.gene052526.t1

MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDYNHNSYNASSKTPPLPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPLLMDQYDDQTYNNMQQNSKHSSSRSTSYGLENDDNFFDGILANDHGMQNGCDTNSKGGDNNNETLFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNSGISSNAEENNSFVSLLSQLPPSTTFHQNSILGSVGDGVMRQQFQLPDINWN