Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052696.t1 | XP_003627170.1 | 78.8 | 297 | 52 | 3 | 1 | 297 | 1 | 286 | 7.10E-107 | 397.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052696.t1 | F4I7L1 | 41.2 | 313 | 141 | 7 | 1 | 292 | 1 | 291 | 6.8e-50 | 199.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052696.t1 | G7LI96 | 78.8 | 297 | 52 | 3 | 1 | 297 | 1 | 286 | 5.1e-107 | 397.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052696.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052696.t1 | MTR_8g018410 | 83.946 | 299 | 33 | 4 | 1 | 297 | 1 | 286 | 1.76e-172 | 479 |
| MS.gene052696.t1 | MTR_2g099610 | 47.302 | 315 | 134 | 9 | 1 | 296 | 1 | 302 | 1.64e-79 | 243 |
| MS.gene052696.t1 | MTR_4g097130 | 40.196 | 204 | 101 | 5 | 1 | 189 | 1 | 198 | 4.06e-35 | 129 |
| MS.gene052696.t1 | MTR_2g031870 | 36.866 | 217 | 115 | 5 | 1 | 211 | 1 | 201 | 4.28e-35 | 129 |
| MS.gene052696.t1 | MTR_4g097130 | 40.196 | 204 | 101 | 5 | 1 | 189 | 1 | 198 | 4.56e-35 | 129 |
| MS.gene052696.t1 | MTR_5g015340 | 39.791 | 191 | 105 | 4 | 1 | 189 | 1 | 183 | 6.16e-35 | 128 |
| MS.gene052696.t1 | MTR_5g015340 | 39.791 | 191 | 105 | 4 | 1 | 189 | 1 | 183 | 6.16e-35 | 128 |
| MS.gene052696.t1 | MTR_4g097130 | 40.191 | 209 | 99 | 6 | 1 | 189 | 1 | 203 | 7.40e-35 | 128 |
| MS.gene052696.t1 | MTR_8g494240 | 37.327 | 217 | 108 | 7 | 1 | 208 | 1 | 198 | 1.25e-33 | 125 |
| MS.gene052696.t1 | MTR_5g015340 | 39.791 | 191 | 105 | 4 | 1 | 189 | 1 | 183 | 1.51e-33 | 127 |
| MS.gene052696.t1 | MTR_8g494240 | 37.037 | 216 | 110 | 6 | 1 | 208 | 1 | 198 | 1.56e-33 | 125 |
| MS.gene052696.t1 | MTR_8g494240 | 37.037 | 216 | 110 | 6 | 1 | 208 | 1 | 198 | 6.64e-33 | 125 |
| MS.gene052696.t1 | MTR_8g092810 | 35.533 | 197 | 109 | 3 | 1 | 189 | 1 | 187 | 3.65e-29 | 115 |
| MS.gene052696.t1 | MTR_0095s0040 | 37.126 | 167 | 81 | 5 | 1 | 155 | 1 | 155 | 7.47e-23 | 95.1 |
| MS.gene052696.t1 | MTR_1g041765 | 55.556 | 63 | 28 | 0 | 1 | 63 | 1 | 63 | 1.58e-18 | 82.0 |
| MS.gene052696.t1 | MTR_2g031870 | 31.282 | 195 | 94 | 5 | 1 | 189 | 1 | 161 | 4.38e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052696.t1 | AT1G72740 | 43.667 | 300 | 141 | 7 | 1 | 294 | 1 | 278 | 2.49e-67 | 211 |
| MS.gene052696.t1 | AT1G72740 | 42.810 | 306 | 141 | 8 | 1 | 294 | 1 | 284 | 5.30e-65 | 206 |
| MS.gene052696.t1 | AT1G17520 | 42.540 | 315 | 132 | 7 | 1 | 294 | 1 | 287 | 8.64e-65 | 205 |
| MS.gene052696.t1 | AT1G17520 | 42.405 | 316 | 132 | 8 | 1 | 294 | 1 | 288 | 5.35e-63 | 201 |
| MS.gene052696.t1 | AT1G17520 | 41.745 | 321 | 132 | 8 | 1 | 294 | 1 | 293 | 2.52e-62 | 199 |
| MS.gene052696.t1 | AT1G17520 | 41.615 | 322 | 132 | 9 | 1 | 294 | 1 | 294 | 1.67e-60 | 194 |
| MS.gene052696.t1 | AT1G49950 | 37.500 | 192 | 108 | 4 | 1 | 189 | 1 | 183 | 3.17e-30 | 116 |
| MS.gene052696.t1 | AT1G49950 | 37.500 | 192 | 108 | 4 | 1 | 189 | 1 | 183 | 3.17e-30 | 116 |
| MS.gene052696.t1 | AT1G49950 | 37.500 | 192 | 108 | 4 | 1 | 189 | 1 | 183 | 3.17e-30 | 116 |
| MS.gene052696.t1 | AT3G49850 | 34.518 | 197 | 113 | 4 | 1 | 191 | 1 | 187 | 1.36e-27 | 108 |
| MS.gene052696.t1 | AT3G49850 | 34.518 | 197 | 113 | 4 | 1 | 191 | 1 | 187 | 1.36e-27 | 108 |
| MS.gene052696.t1 | AT5G67580 | 34.715 | 193 | 116 | 3 | 1 | 189 | 1 | 187 | 2.08e-25 | 103 |
| MS.gene052696.t1 | AT5G67580 | 34.715 | 193 | 116 | 3 | 1 | 189 | 1 | 187 | 2.08e-25 | 103 |
| MS.gene052696.t1 | AT1G54260 | 33.161 | 193 | 109 | 3 | 122 | 294 | 2 | 194 | 2.26e-22 | 92.4 |
| MS.gene052696.t1 | AT1G54240 | 28.736 | 174 | 113 | 5 | 128 | 294 | 57 | 226 | 6.55e-11 | 61.6 |
Find 56 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTCTGACTACATTAA+AGG | 0.241020 | 8.1:+79797517 | MS.gene052696:CDS |
| AAAGACATGGCCCTGGTAAA+TGG | 0.273347 | 8.1:+79795528 | MS.gene052696:CDS |
| GAGACTGATGATTGCCGTTT+CGG | 0.334617 | 8.1:-79799143 | None:intergenic |
| AACTGAAAACAAATCATATC+TGG | 0.352692 | 8.1:+79799235 | MS.gene052696:CDS |
| CAAGATAAAAGAAGCCTTGT+TGG | 0.360419 | 8.1:+79799049 | MS.gene052696:CDS |
| GCAGCAGGAGGTTTGCATTT+GGG | 0.365666 | 8.1:-79795761 | None:intergenic |
| AGCAGCAGGAGGTTTGCATT+TGG | 0.389149 | 8.1:-79795762 | None:intergenic |
| TGGGAAATCAAAAGCTGAAA+TGG | 0.392712 | 8.1:+79795468 | MS.gene052696:CDS |
| ACTACATTAAAGGATACTAA+TGG | 0.429817 | 8.1:+79797527 | MS.gene052696:CDS |
| TGCGCGGTGAAACTATCAAA+TGG | 0.448048 | 8.1:+79799450 | MS.gene052696:CDS |
| ACATTGTTCATAAAGTTGTT+CGG | 0.449895 | 8.1:-79799330 | None:intergenic |
| ATAATATTACTCAAGTTCCT+AGG | 0.465364 | 8.1:+79795735 | MS.gene052696:CDS |
| GCAGGAGAAGAAGCAGCAGC+AGG | 0.466105 | 8.1:-79795776 | None:intergenic |
| CAGCAAAACAAAAGGTGGTC+AGG | 0.470148 | 8.1:+79799120 | MS.gene052696:CDS |
| ATTCTCCTTGACCCTCAGTT+CGG | 0.477510 | 8.1:+79795557 | MS.gene052696:CDS |
| AGAATGGCTTTCCATTTACC+AGG | 0.481104 | 8.1:-79795539 | None:intergenic |
| ATCACCTTCACCAAAACAAA+AGG | 0.490999 | 8.1:+79799079 | MS.gene052696:CDS |
| AAAAGGTGGTCAGGCCGAAA+CGG | 0.494784 | 8.1:+79799129 | MS.gene052696:CDS |
| GAACTGAGGGTCAAGGAGAA+TGG | 0.501381 | 8.1:-79795555 | None:intergenic |
| GGAGGAACAATTTGAAGAGG+AGG | 0.508616 | 8.1:-79795869 | None:intergenic |
| GAAGAAGACGCTCTTATCGC+TGG | 0.509747 | 8.1:+79795500 | MS.gene052696:CDS |
| GCGCGGTGAAACTATCAAAT+GGG | 0.518902 | 8.1:+79799451 | MS.gene052696:CDS |
| AGTCACTGACTGCAAGGTTG+AGG | 0.520186 | 8.1:+79797884 | MS.gene052696:CDS |
| TGCCATTGCTAGTTTCATTG+AGG | 0.522914 | 8.1:+79797562 | MS.gene052696:CDS |
| TGGTCAATTTGAAGAGGAGG+AGG | 0.538373 | 8.1:-79795887 | None:intergenic |
| ATCACCTTCAGCAAAACAAA+AGG | 0.539850 | 8.1:+79799112 | MS.gene052696:CDS |
| ACAGGAGAAGAAGCAGCAGC+AGG | 0.546274 | 8.1:-79795794 | None:intergenic |
| TTGAGGATGCTTGTGAGTCA+AGG | 0.546963 | 8.1:+79797901 | MS.gene052696:CDS |
| TCGTTCCAACATCGACCTCA+AGG | 0.556659 | 8.1:+79795595 | MS.gene052696:CDS |
| TCAGAAAGTCACTGACTGCA+AGG | 0.561065 | 8.1:+79797878 | MS.gene052696:CDS |
| ACCAACCTTGAGGTCGATGT+TGG | 0.562701 | 8.1:-79795600 | None:intergenic |
| TTAACAACAACATCAGAAGA+AGG | 0.563592 | 8.1:-79795836 | None:intergenic |
| GAGTCAAGGGAAGCTTGAAA+AGG | 0.565631 | 8.1:+79797915 | MS.gene052696:CDS |
| ATTGCTGCAGCAAAAGCATC+CGG | 0.566445 | 8.1:+79797843 | MS.gene052696:intron |
| GGTTTGCATTTGGGAAACCT+AGG | 0.568248 | 8.1:-79795752 | None:intergenic |
| GGAGGAGGAACAATTTGAAG+AGG | 0.571972 | 8.1:-79795872 | None:intergenic |
| TGAGGATGCTTGTGAGTCAA+GGG | 0.572315 | 8.1:+79797902 | MS.gene052696:CDS |
| CAAATCATATCTGGCAACTG+AGG | 0.579566 | 8.1:+79799244 | MS.gene052696:CDS |
| TCTATTTATGCAGGTTTGCG+CGG | 0.584806 | 8.1:+79799434 | MS.gene052696:intron |
| TCTTGGTCAATTTGAAGAGG+AGG | 0.585658 | 8.1:-79795890 | None:intergenic |
| GGAGAAGAAGCAGCAGCAGG+AGG | 0.588164 | 8.1:-79795773 | None:intergenic |
| ACATCTTGGTCAATTTGAAG+AGG | 0.588942 | 8.1:-79795893 | None:intergenic |
| AACTGAGGCAGTCAAGGCGA+CGG | 0.589786 | 8.1:+79799259 | MS.gene052696:CDS |
| TCTGGCAACTGAGGCAGTCA+AGG | 0.592576 | 8.1:+79799253 | MS.gene052696:CDS |
| TTGGAACGAGAAGTGAGTAA+AGG | 0.596141 | 8.1:-79795581 | None:intergenic |
| GGAATCGAAAGACATGGCCC+TGG | 0.601309 | 8.1:+79795521 | MS.gene052696:CDS |
| AGTCTCTGATGATATGCTGA+AGG | 0.602271 | 8.1:+79799178 | MS.gene052696:CDS |
| ACCTTCAGCAAAACAAAAGG+TGG | 0.623190 | 8.1:+79799115 | MS.gene052696:CDS |
| AACCTCAATGAAACTAGCAA+TGG | 0.624133 | 8.1:-79797564 | None:intergenic |
| AAGGACCGAACTGAGGGTCA+AGG | 0.625130 | 8.1:-79795562 | None:intergenic |
| ACCTTCACCAAAACAAAAGG+AGG | 0.631938 | 8.1:+79799082 | MS.gene052696:CDS |
| TGAGTAAAGGACCGAACTGA+GGG | 0.636132 | 8.1:-79795568 | None:intergenic |
| GAATGGCTTTCCATTTACCA+GGG | 0.646220 | 8.1:-79795538 | None:intergenic |
| GTGAGTAAAGGACCGAACTG+AGG | 0.646832 | 8.1:-79795569 | None:intergenic |
| ACTAGCAATGGCATTTACGT+CGG | 0.664174 | 8.1:-79797552 | None:intergenic |
| ATCGCTGGAATCGAAAGACA+TGG | 0.677427 | 8.1:+79795515 | MS.gene052696:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAGTTTAATTAAATT+TGG | - | chr8.1:79797212-79797231 | None:intergenic | 10.0% |
| !! | TTAATATATCAGATTATATT+AGG | + | chr8.1:79797448-79797467 | MS.gene052696:intron | 10.0% |
| !!! | AATATATATTTCTTTGTTTT+AGG | + | chr8.1:79795688-79795707 | MS.gene052696:intron | 10.0% |
| !!! | ATTATAAATGTTTTGTTAAA+AGG | + | chr8.1:79797016-79797035 | MS.gene052696:intron | 10.0% |
| !!! | CTAAGTTTTTTTTATTTTTT+TGG | - | chr8.1:79796134-79796153 | None:intergenic | 10.0% |
| !!! | TTATAAATGTTTTGTTAAAA+GGG | + | chr8.1:79797017-79797036 | MS.gene052696:intron | 10.0% |
| !! | AAAACATTTATAATACTTAC+AGG | - | chr8.1:79797010-79797029 | None:intergenic | 15.0% |
| !!! | TTTAATTAAATTTGGTGAAA+CGG | - | chr8.1:79797204-79797223 | None:intergenic | 15.0% |
| !! | AAATAAAATATTGTTGAGTG+AGG | + | chr8.1:79796404-79796423 | MS.gene052696:intron | 20.0% |
| !! | AATAAAATATTGTTGAGTGA+GGG | + | chr8.1:79796405-79796424 | MS.gene052696:intron | 20.0% |
| !! | AGAGTTTATTCAAGATTTAT+TGG | + | chr8.1:79796533-79796552 | MS.gene052696:intron | 20.0% |
| !! | ATCAGATTATATTAGGTTAT+TGG | + | chr8.1:79797455-79797474 | MS.gene052696:intron | 20.0% |
| !! | ATGTAAGAATTAAAATACCT+AGG | - | chr8.1:79795935-79795954 | None:intergenic | 20.0% |
| !! | CAAATTATGCAAAGAAATTT+AGG | - | chr8.1:79798864-79798883 | None:intergenic | 20.0% |
| !! | CTAAATTTCTTTGCATAATT+TGG | + | chr8.1:79798862-79798881 | MS.gene052696:intron | 20.0% |
| !! | TAATGATTCTTTACATTCAT+TGG | + | chr8.1:79796937-79796956 | MS.gene052696:intron | 20.0% |
| !! | TATTGTTAAATCATGTTGTT+TGG | + | chr8.1:79798021-79798040 | MS.gene052696:intron | 20.0% |
| !!! | TTAATTAAATTTGGTGAAAC+GGG | - | chr8.1:79797203-79797222 | None:intergenic | 20.0% |
| !!! | TTCTTTTGCTATTAATTTGA+TGG | + | chr8.1:79797390-79797409 | MS.gene052696:intron | 20.0% |
| !!! | TTTCTTTGTTTTAGGATAAA+TGG | + | chr8.1:79795696-79795715 | MS.gene052696:intron | 20.0% |
| !!! | TTTTGTACTAAATAGTGAAT+CGG | + | chr8.1:79796656-79796675 | MS.gene052696:intron | 20.0% |
| ! | AACAAACTTCAAGATATTTC+AGG | - | chr8.1:79798951-79798970 | None:intergenic | 25.0% |
| ! | AACTGAAAACAAATCATATC+TGG | + | chr8.1:79799235-79799254 | MS.gene052696:CDS | 25.0% |
| ! | AATTATAACCATTGATCTTG+TGG | + | chr8.1:79799410-79799429 | MS.gene052696:intron | 25.0% |
| ! | ACAATATCTGTGTTTCATAA+GGG | - | chr8.1:79797156-79797175 | None:intergenic | 25.0% |
| ! | ACAGACACTAAAAAATACAA+GGG | - | chr8.1:79798140-79798159 | None:intergenic | 25.0% |
| ! | ACATTGTTCATAAAGTTGTT+CGG | - | chr8.1:79799333-79799352 | None:intergenic | 25.0% |
| ! | ACTACATTAAAGGATACTAA+TGG | + | chr8.1:79797527-79797546 | MS.gene052696:CDS | 25.0% |
| ! | ATAATATTACTCAAGTTCCT+AGG | + | chr8.1:79795735-79795754 | MS.gene052696:CDS | 25.0% |
| ! | ATAGTGTATTGTTACAATTC+TGG | + | chr8.1:79796586-79796605 | MS.gene052696:intron | 25.0% |
| ! | ATATCAACTACTAGAATGAA+TGG | + | chr8.1:79797682-79797701 | MS.gene052696:intron | 25.0% |
| ! | ATCACTATGTTGTAACAATA+TGG | - | chr8.1:79796266-79796285 | None:intergenic | 25.0% |
| ! | ATGACATCATACCTAATAAA+AGG | - | chr8.1:79797491-79797510 | None:intergenic | 25.0% |
| ! | ATGCATAATCTCAAAAAACA+GGG | - | chr8.1:79797664-79797683 | None:intergenic | 25.0% |
| ! | ATTATAACCATTGATCTTGT+GGG | + | chr8.1:79799411-79799430 | MS.gene052696:intron | 25.0% |
| ! | ATTATGACTCTGTAGTTAAA+AGG | + | chr8.1:79796857-79796876 | MS.gene052696:intron | 25.0% |
| ! | ATTCAAGATTTATTGGAGTA+AGG | + | chr8.1:79796540-79796559 | MS.gene052696:intron | 25.0% |
| ! | ATTGTTACAACATAGTGATT+TGG | + | chr8.1:79796267-79796286 | MS.gene052696:intron | 25.0% |
| ! | TACAATATCTGTGTTTCATA+AGG | - | chr8.1:79797157-79797176 | None:intergenic | 25.0% |
| ! | TATGCATAATCTCAAAAAAC+AGG | - | chr8.1:79797665-79797684 | None:intergenic | 25.0% |
| ! | TCACAAAAGTTGTCAAAAAA+TGG | - | chr8.1:79798773-79798792 | None:intergenic | 25.0% |
| ! | TTTATGTATTCAAGATCTCT+TGG | + | chr8.1:79798233-79798252 | MS.gene052696:intron | 25.0% |
| ! | TTTGTATTGAGTATTCTACA+TGG | + | chr8.1:79797778-79797797 | MS.gene052696:intron | 25.0% |
| !! | AACTTGAATTCTTTGAAAGA+GGG | + | chr8.1:79798491-79798510 | MS.gene052696:intron | 25.0% |
| !! | ACTTGGAAAACTAGTTTATA+TGG | + | chr8.1:79797731-79797750 | MS.gene052696:intron | 25.0% |
| !! | ATTTGAACGTGTATTTTACT+TGG | + | chr8.1:79797995-79798014 | MS.gene052696:intron | 25.0% |
| !! | GGTTTTTAAATTGATCCTAT+AGG | + | chr8.1:79797267-79797286 | MS.gene052696:intron | 25.0% |
| !! | GTACTTTTGTTCCTTTTATT+AGG | + | chr8.1:79797477-79797496 | MS.gene052696:intron | 25.0% |
| !! | TAATTTTCCTTGATGTAACT+TGG | + | chr8.1:79797714-79797733 | MS.gene052696:intron | 25.0% |
| !! | TCAAGTTCTAATGAATATGA+TGG | - | chr8.1:79798478-79798497 | None:intergenic | 25.0% |
| !! | TGGTTAATTTGGAAACTTAT+AGG | + | chr8.1:79798253-79798272 | MS.gene052696:intron | 25.0% |
| !!! | TGTTGTTTTTAACAACATCT+TGG | - | chr8.1:79795910-79795929 | None:intergenic | 25.0% |
| AAAATACAAGGGAAAAACTG+TGG | - | chr8.1:79798129-79798148 | None:intergenic | 30.0% | |
| AAATAAACACACGCACTAAA+GGG | - | chr8.1:79796347-79796366 | None:intergenic | 30.0% | |
| CAATATCTGTGTTTCATAAG+GGG | - | chr8.1:79797155-79797174 | None:intergenic | 30.0% | |
| CACAGACACTAAAAAATACA+AGG | - | chr8.1:79798141-79798160 | None:intergenic | 30.0% | |
| TCAAGATCTCTTGGTTAATT+TGG | + | chr8.1:79798242-79798261 | MS.gene052696:intron | 30.0% | |
| TCTGTTATTGTAAGGATCTT+GGG | + | chr8.1:79798537-79798556 | MS.gene052696:intron | 30.0% | |
| TTAACAACAACATCAGAAGA+AGG | - | chr8.1:79795839-79795858 | None:intergenic | 30.0% | |
| TTGTTAAAAACAACACACCT+AGG | + | chr8.1:79795915-79795934 | MS.gene052696:CDS | 30.0% | |
| TTGTTAAATAGCAGCTATAG+AGG | - | chr8.1:79796731-79796750 | None:intergenic | 30.0% | |
| ! | AGTTAAAAGGCTTTTGTACT+CGG | + | chr8.1:79796870-79796889 | MS.gene052696:intron | 30.0% |
| ! | CTATAGCTGCTATTTAACAA+CGG | + | chr8.1:79796731-79796750 | MS.gene052696:intron | 30.0% |
| ! | GAACTTGAATTCTTTGAAAG+AGG | + | chr8.1:79798490-79798509 | MS.gene052696:intron | 30.0% |
| ! | GCATTGTTTTCCACTAAAAT+AGG | + | chr8.1:79798406-79798425 | MS.gene052696:intron | 30.0% |
| ! | GTTGTGAGGAAATTTTATGT+GGG | + | chr8.1:79796289-79796308 | MS.gene052696:intron | 30.0% |
| ! | TAGTTTTCCAAGTTACATCA+AGG | - | chr8.1:79797724-79797743 | None:intergenic | 30.0% |
| ! | TTGTTTTCCACTAAAATAGG+TGG | + | chr8.1:79798409-79798428 | MS.gene052696:intron | 30.0% |
| !! | ATTAGAGCATCATTTTGTAC+TGG | + | chr8.1:79797052-79797071 | MS.gene052696:intron | 30.0% |
| !! | TGTTTTGTTAAAAGGGTAGA+AGG | + | chr8.1:79797024-79797043 | MS.gene052696:intron | 30.0% |
| !! | TTAGAGCATCATTTTGTACT+GGG | + | chr8.1:79797053-79797072 | MS.gene052696:intron | 30.0% |
| !!! | AGAGCAACATTTTGATTAAC+AGG | - | chr8.1:79795815-79795834 | None:intergenic | 30.0% |
| !!! | AGTGACTTTCTGAAATTTTG+AGG | - | chr8.1:79797871-79797890 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTAGGATAAATGG+AGG | + | chr8.1:79795699-79795718 | MS.gene052696:intron | 30.0% |
| !!! | TGTATTTTTTAGTGTCTGTG+CGG | + | chr8.1:79798141-79798160 | MS.gene052696:intron | 30.0% |
| !!! | TTTCTGAAATTTTGAGGAAC+CGG | - | chr8.1:79797865-79797884 | None:intergenic | 30.0% |
| AAAAACGAAAACCCTAAGCT+AGG | - | chr8.1:79795634-79795653 | None:intergenic | 35.0% | |
| AAAACCGTCTTAAAAGGAGA+GGG | - | chr8.1:79796499-79796518 | None:intergenic | 35.0% | |
| AAAACGAAAACCCTAAGCTA+GGG | - | chr8.1:79795633-79795652 | None:intergenic | 35.0% | |
| AAATAGACCCACAAGATCAA+TGG | - | chr8.1:79799421-79799440 | None:intergenic | 35.0% | |
| AACCTCAATGAAACTAGCAA+TGG | - | chr8.1:79797567-79797586 | None:intergenic | 35.0% | |
| AACTTATAGGTATAGCTGTG+TGG | + | chr8.1:79798266-79798285 | MS.gene052696:intron | 35.0% | |
| AAGCACAGGAACATCTATTT+GGG | - | chr8.1:79798684-79798703 | None:intergenic | 35.0% | |
| AATAAACACACGCACTAAAG+GGG | - | chr8.1:79796346-79796365 | None:intergenic | 35.0% | |
| ACATCTTGGTCAATTTGAAG+AGG | - | chr8.1:79795896-79795915 | None:intergenic | 35.0% | |
| ACTTATAGGTATAGCTGTGT+GGG | + | chr8.1:79798267-79798286 | MS.gene052696:intron | 35.0% | |
| AGCAATAGAGAGAAAGTAGA+AGG | - | chr8.1:79798823-79798842 | None:intergenic | 35.0% | |
| ATAGGTGTACATGTAATGAC+AGG | + | chr8.1:79797285-79797304 | MS.gene052696:intron | 35.0% | |
| ATCACCTTCACCAAAACAAA+AGG | + | chr8.1:79799079-79799098 | MS.gene052696:CDS | 35.0% | |
| ATCACCTTCAGCAAAACAAA+AGG | + | chr8.1:79799112-79799131 | MS.gene052696:CDS | 35.0% | |
| CAAATAAACACACGCACTAA+AGG | - | chr8.1:79796348-79796367 | None:intergenic | 35.0% | |
| CAACAAGTTGTCACAAGAAA+TGG | + | chr8.1:79798890-79798909 | MS.gene052696:intron | 35.0% | |
| CATATTATCTCATCCAATGC+AGG | - | chr8.1:79796433-79796452 | None:intergenic | 35.0% | |
| CATTTCTTGTGACAACTTGT+TGG | - | chr8.1:79798892-79798911 | None:intergenic | 35.0% | |
| CTCTACAAAACCGTCTTAAA+AGG | - | chr8.1:79796505-79796524 | None:intergenic | 35.0% | |
| CTCTGTTATTGTAAGGATCT+TGG | + | chr8.1:79798536-79798555 | MS.gene052696:intron | 35.0% | |
| CTTTACATTCATTGGATGTC+TGG | + | chr8.1:79796945-79796964 | MS.gene052696:intron | 35.0% | |
| GCGTGTGTTTATTTGAGTAT+GGG | + | chr8.1:79796353-79796372 | MS.gene052696:intron | 35.0% | |
| GCTATCGTAGAATATTGCTT+TGG | + | chr8.1:79798320-79798339 | MS.gene052696:intron | 35.0% | |
| GTCATTACATGTACACCTAT+AGG | - | chr8.1:79797285-79797304 | None:intergenic | 35.0% | |
| GTGTTTATTTGAGTATGGGT+TGG | + | chr8.1:79796357-79796376 | MS.gene052696:intron | 35.0% | |
| TACTATACCATTTCGTGAGT+TGG | + | chr8.1:79797629-79797648 | MS.gene052696:intron | 35.0% | |
| TAGGTGTACATGTAATGACA+GGG | + | chr8.1:79797286-79797305 | MS.gene052696:intron | 35.0% | |
| TATATCGTAGTGACTAGAGA+TGG | + | chr8.1:79797106-79797125 | MS.gene052696:intron | 35.0% | |
| TATGTGACAATCAGTCTGAT+CGG | + | chr8.1:79797239-79797258 | MS.gene052696:intron | 35.0% | |
| TCCTGCAGATGGTAAAAAAT+TGG | - | chr8.1:79799017-79799036 | None:intergenic | 35.0% | |
| TCTTCTGAACAATTCGTCAT+TGG | - | chr8.1:79796003-79796022 | None:intergenic | 35.0% | |
| TGCGTGTGTTTATTTGAGTA+TGG | + | chr8.1:79796352-79796371 | MS.gene052696:intron | 35.0% | |
| TGGGAAATCAAAAGCTGAAA+TGG | + | chr8.1:79795468-79795487 | MS.gene052696:CDS | 35.0% | |
| TTATTGTAAGGATCTTGGGT+GGG | + | chr8.1:79798541-79798560 | MS.gene052696:intron | 35.0% | |
| TTCATGTCACTCTAGATGTT+TGG | + | chr8.1:79796786-79796805 | MS.gene052696:intron | 35.0% | |
| TTTCAAACCAACTCACGAAA+TGG | - | chr8.1:79797639-79797658 | None:intergenic | 35.0% | |
| ! | AACAATTTTGTTCCTGCAGA+TGG | - | chr8.1:79799028-79799047 | None:intergenic | 35.0% |
| ! | ACTTAAGTTGCACATATCTC+TGG | - | chr8.1:79798444-79798463 | None:intergenic | 35.0% |
| ! | AGAACCTGAGTTTGATTTCT+TGG | + | chr8.1:79796020-79796039 | MS.gene052696:intron | 35.0% |
| ! | ATTGGAAAGAGTGATGATGA+TGG | - | chr8.1:79798605-79798624 | None:intergenic | 35.0% |
| ! | CAAGATAAAAGAAGCCTTGT+TGG | + | chr8.1:79799049-79799068 | MS.gene052696:CDS | 35.0% |
| ! | CTTAAGTTGCACATATCTCT+GGG | - | chr8.1:79798443-79798462 | None:intergenic | 35.0% |
| ! | GAAATTTTATGTGGGTGTCT+GGG | + | chr8.1:79796297-79796316 | MS.gene052696:intron | 35.0% |
| ! | GGTTGTGAGGAAATTTTATG+TGG | + | chr8.1:79796288-79796307 | MS.gene052696:intron | 35.0% |
| ! | TGAAGCTCTGACTACATTAA+AGG | + | chr8.1:79797517-79797536 | MS.gene052696:CDS | 35.0% |
| ! | TGTTGTTGAGAAGTTTCTAG+TGG | - | chr8.1:79798365-79798384 | None:intergenic | 35.0% |
| ! | TTTTGCTGCAGCAATATATG+TGG | - | chr8.1:79797838-79797857 | None:intergenic | 35.0% |
| !! | AACATAGTGATTTGGTTGTG+AGG | + | chr8.1:79796275-79796294 | MS.gene052696:intron | 35.0% |
| !! | GTTGTTGAGAAGTTTCTAGT+GGG | - | chr8.1:79798364-79798383 | None:intergenic | 35.0% |
| !!! | AGGTGATTTTTTCACCAACA+AGG | - | chr8.1:79799066-79799085 | None:intergenic | 35.0% |
| !!! | CTTTTAAGACGGTTTTGTAG+AGG | + | chr8.1:79796503-79796522 | MS.gene052696:intron | 35.0% |
| !!! | TCCAATTTTTTACCATCTGC+AGG | + | chr8.1:79799013-79799032 | MS.gene052696:intron | 35.0% |
| !!! | TTTTGTTTTGCTGAAGGTGA+TGG | - | chr8.1:79799113-79799132 | None:intergenic | 35.0% |
| AACAACATGCACAGTCGATA+AGG | + | chr8.1:79798378-79798397 | MS.gene052696:intron | 40.0% | |
| ACCTTCACCAAAACAAAAGG+AGG | + | chr8.1:79799082-79799101 | MS.gene052696:CDS | 40.0% | |
| ACCTTCAGCAAAACAAAAGG+TGG | + | chr8.1:79799115-79799134 | MS.gene052696:CDS | 40.0% | |
| ACTAGCAATGGCATTTACGT+CGG | - | chr8.1:79797555-79797574 | None:intergenic | 40.0% | |
| AGAATGGCTTTCCATTTACC+AGG | - | chr8.1:79795542-79795561 | None:intergenic | 40.0% | |
| AGACCACTAAGCTTGAACAA+AGG | - | chr8.1:79798192-79798211 | None:intergenic | 40.0% | |
| AGTCTCTGATGATATGCTGA+AGG | + | chr8.1:79799178-79799197 | MS.gene052696:CDS | 40.0% | |
| AGTGACATGAATGAGCCTAT+AGG | - | chr8.1:79796777-79796796 | None:intergenic | 40.0% | |
| AGTGTTGCGTGTAGAAACAT+TGG | - | chr8.1:79798623-79798642 | None:intergenic | 40.0% | |
| ATAAACACACGCACTAAAGG+GGG | - | chr8.1:79796345-79796364 | None:intergenic | 40.0% | |
| ATGTTTGGTTGTTGTAGTCG+TGG | + | chr8.1:79796801-79796820 | MS.gene052696:intron | 40.0% | |
| CAAAACCGTCTTAAAAGGAG+AGG | - | chr8.1:79796500-79796519 | None:intergenic | 40.0% | |
| CAAATCATATCTGGCAACTG+AGG | + | chr8.1:79799244-79799263 | MS.gene052696:CDS | 40.0% | |
| CAATCAGTCTGATCGGTAAA+AGG | + | chr8.1:79797246-79797265 | MS.gene052696:intron | 40.0% | |
| GAAGCACAGGAACATCTATT+TGG | - | chr8.1:79798685-79798704 | None:intergenic | 40.0% | |
| GAATGGCTTTCCATTTACCA+GGG | - | chr8.1:79795541-79795560 | None:intergenic | 40.0% | |
| GACTCTGCGCTCTTAAAATT+TGG | + | chr8.1:79798728-79798747 | MS.gene052696:intron | 40.0% | |
| GTTATTGTAAGGATCTTGGG+TGG | + | chr8.1:79798540-79798559 | MS.gene052696:intron | 40.0% | |
| TATCACGTAAGCATCAACAG+AGG | - | chr8.1:79797950-79797969 | None:intergenic | 40.0% | |
| TATTGTAAGGATCTTGGGTG+GGG | + | chr8.1:79798542-79798561 | MS.gene052696:intron | 40.0% | |
| TCACCTTTGTTCAAGCTTAG+TGG | + | chr8.1:79798186-79798205 | MS.gene052696:intron | 40.0% | |
| TCCACCAAGAAATCAAACTC+AGG | - | chr8.1:79796027-79796046 | None:intergenic | 40.0% | |
| TCTATTTATGCAGGTTTGCG+CGG | + | chr8.1:79799434-79799453 | MS.gene052696:intron | 40.0% | |
| TCTGAACAATTCGTCATTGG+CGG | - | chr8.1:79796000-79796019 | None:intergenic | 40.0% | |
| TCTTGGTCAATTTGAAGAGG+AGG | - | chr8.1:79795893-79795912 | None:intergenic | 40.0% | |
| TCTTGTGGGTCTATTTATGC+AGG | + | chr8.1:79799425-79799444 | MS.gene052696:intron | 40.0% | |
| TGTTTGGTTGTTGTAGTCGT+GGG | + | chr8.1:79796802-79796821 | MS.gene052696:intron | 40.0% | |
| TTGGAACGAGAAGTGAGTAA+AGG | - | chr8.1:79795584-79795603 | None:intergenic | 40.0% | |
| ! | AAAAGGCTTTTGTACTCGGA+TGG | + | chr8.1:79796874-79796893 | MS.gene052696:intron | 40.0% |
| ! | ACCTGAGTTTGATTTCTTGG+TGG | + | chr8.1:79796023-79796042 | MS.gene052696:intron | 40.0% |
| ! | ATCATGTTGTTTGGTCGAGT+TGG | + | chr8.1:79798030-79798049 | MS.gene052696:intron | 40.0% |
| ! | CTGCTATTTAACAACGGTGT+TGG | + | chr8.1:79796737-79796756 | MS.gene052696:intron | 40.0% |
| ! | GCATCATTTTGTACTGGGAT+TGG | + | chr8.1:79797058-79797077 | MS.gene052696:intron | 40.0% |
| ! | GGAAATTTTATGTGGGTGTC+TGG | + | chr8.1:79796296-79796315 | MS.gene052696:intron | 40.0% |
| ! | GTAGTGGCTCTGTTATTGTA+AGG | + | chr8.1:79798529-79798548 | MS.gene052696:intron | 40.0% |
| ! | TGCCATTGCTAGTTTCATTG+AGG | + | chr8.1:79797562-79797581 | MS.gene052696:CDS | 40.0% |
| !! | ACATCCCTCTCCTTTTAAGA+CGG | + | chr8.1:79796492-79796511 | MS.gene052696:intron | 40.0% |
| !! | ATTTGGGAGAGTTTTAGTCC+TGG | - | chr8.1:79798668-79798687 | None:intergenic | 40.0% |
| !! | TGACATGCCACCTATTTTAG+TGG | - | chr8.1:79798419-79798438 | None:intergenic | 40.0% |
| !! | TTAAGACGGTTTTGTAGAGG+TGG | + | chr8.1:79796506-79796525 | MS.gene052696:intron | 40.0% |
| !! | TTGAGTATGGGTTGGTTACT+TGG | + | chr8.1:79796365-79796384 | MS.gene052696:intron | 40.0% |
| !!! | ACCACCTTTTGTTTTGCTGA+AGG | - | chr8.1:79799119-79799138 | None:intergenic | 40.0% |
| !!! | TTTTTTTGGCGTTAACCCTC+CGG | - | chr8.1:79796120-79796139 | None:intergenic | 40.0% |
| AAAGACATGGCCCTGGTAAA+TGG | + | chr8.1:79795528-79795547 | MS.gene052696:CDS | 45.0% | |
| AGATGTTCCTGTGCTTCCAT+TGG | + | chr8.1:79798688-79798707 | MS.gene052696:intron | 45.0% | |
| AGGGAAAAACTGTGGAGCAT+AGG | - | chr8.1:79798121-79798140 | None:intergenic | 45.0% | |
| ATCGCTGGAATCGAAAGACA+TGG | + | chr8.1:79795515-79795534 | MS.gene052696:CDS | 45.0% | |
| ATGAGCCTATAGGCTATAGC+AGG | - | chr8.1:79796767-79796786 | None:intergenic | 45.0% | |
| ATTCTCCTTGACCCTCAGTT+CGG | + | chr8.1:79795557-79795576 | MS.gene052696:CDS | 45.0% | |
| ATTGTAAGGATCTTGGGTGG+GGG | + | chr8.1:79798543-79798562 | MS.gene052696:intron | 45.0% | |
| CAGCAAAACAAAAGGTGGTC+AGG | + | chr8.1:79799120-79799139 | MS.gene052696:CDS | 45.0% | |
| GAAAAACTGTGGAGCATAGG+AGG | - | chr8.1:79798118-79798137 | None:intergenic | 45.0% | |
| GAAAACCCTAAGCTAGGGTA+AGG | - | chr8.1:79795628-79795647 | None:intergenic | 45.0% | |
| GACCATGGTATTCAGAGTTC+GGG | - | chr8.1:79796082-79796101 | None:intergenic | 45.0% | |
| GACGGAAAAATACTCACGCA+TGG | + | chr8.1:79799277-79799296 | MS.gene052696:CDS | 45.0% | |
| GAGTCAAGGGAAGCTTGAAA+AGG | + | chr8.1:79797915-79797934 | MS.gene052696:CDS | 45.0% | |
| GATGTTCCTGTGCTTCCATT+GGG | + | chr8.1:79798689-79798708 | MS.gene052696:intron | 45.0% | |
| GCGCGGTGAAACTATCAAAT+GGG | + | chr8.1:79799451-79799470 | MS.gene052696:CDS | 45.0% | |
| GCTATACTGCTAGAGCGTAA+TGG | - | chr8.1:79796707-79796726 | None:intergenic | 45.0% | |
| GGACCATGGTATTCAGAGTT+CGG | - | chr8.1:79796083-79796102 | None:intergenic | 45.0% | |
| GGAGGAACAATTTGAAGAGG+AGG | - | chr8.1:79795872-79795891 | None:intergenic | 45.0% | |
| GGAGGAGGAACAATTTGAAG+AGG | - | chr8.1:79795875-79795894 | None:intergenic | 45.0% | |
| GGTTACCTTACCCTAGCTTA+GGG | + | chr8.1:79795620-79795639 | MS.gene052696:intron | 45.0% | |
| GGTTTGCATTTGGGAAACCT+AGG | - | chr8.1:79795755-79795774 | None:intergenic | 45.0% | |
| GTATAGCTGTGTGGGTGATT+TGG | + | chr8.1:79798275-79798294 | MS.gene052696:intron | 45.0% | |
| GTTTGGTTGTTGTAGTCGTG+GGG | + | chr8.1:79796803-79796822 | MS.gene052696:intron | 45.0% | |
| TGAGGATGCTTGTGAGTCAA+GGG | + | chr8.1:79797902-79797921 | MS.gene052696:CDS | 45.0% | |
| TGAGTAAAGGACCGAACTGA+GGG | - | chr8.1:79795571-79795590 | None:intergenic | 45.0% | |
| TGCGCGGTGAAACTATCAAA+TGG | + | chr8.1:79799450-79799469 | MS.gene052696:CDS | 45.0% | |
| TGCTTTGGCAATTGACCAGA+GGG | + | chr8.1:79798335-79798354 | MS.gene052696:intron | 45.0% | |
| TGGAGTAAGGTTGTCAATCG+CGG | + | chr8.1:79796553-79796572 | MS.gene052696:intron | 45.0% | |
| TGGTCAATTTGAAGAGGAGG+AGG | - | chr8.1:79795890-79795909 | None:intergenic | 45.0% | |
| TGGTTACCTTACCCTAGCTT+AGG | + | chr8.1:79795619-79795638 | MS.gene052696:intron | 45.0% | |
| TTGAGGATGCTTGTGAGTCA+AGG | + | chr8.1:79797901-79797920 | MS.gene052696:CDS | 45.0% | |
| TTGCTTTGGCAATTGACCAG+AGG | + | chr8.1:79798334-79798353 | MS.gene052696:intron | 45.0% | |
| TTTGGTTGTTGTAGTCGTGG+GGG | + | chr8.1:79796804-79796823 | MS.gene052696:intron | 45.0% | |
| ! | GAGACTGATGATTGCCGTTT+CGG | - | chr8.1:79799146-79799165 | None:intergenic | 45.0% |
| ! | TCAGAAAGTCACTGACTGCA+AGG | + | chr8.1:79797878-79797897 | MS.gene052696:CDS | 45.0% |
| ! | TTTTGTACTCGGATGGTCGA+CGG | + | chr8.1:79796881-79796900 | MS.gene052696:intron | 45.0% |
| !! | ATTGCTGCAGCAAAAGCATC+CGG | + | chr8.1:79797843-79797862 | MS.gene052696:intron | 45.0% |
| !! | GAGAGTTTTAGTCCTGGCAA+TGG | - | chr8.1:79798662-79798681 | None:intergenic | 45.0% |
| !! | GGGTTGGTTACTTGGTCAAT+TGG | + | chr8.1:79796373-79796392 | MS.gene052696:intron | 45.0% |
| !! | TTTTGCTGAAGGTGATGGCT+TGG | - | chr8.1:79799108-79799127 | None:intergenic | 45.0% |
| !!! | GCCTCCTTTTGTTTTGGTGA+AGG | - | chr8.1:79799086-79799105 | None:intergenic | 45.0% |
| !!! | GGGGATTTTTTCGCAAGTAG+AGG | + | chr8.1:79798562-79798581 | MS.gene052696:intron | 45.0% |
| !!! | TTTAAAATTTAAATGAAAAA+AGG | - | chr8.1:79795663-79795682 | None:intergenic | 5.0% |
| AAAAGGTGGTCAGGCCGAAA+CGG | + | chr8.1:79799129-79799148 | MS.gene052696:CDS | 50.0% | |
| AACAAACACCTCTCATGCCC+AGG | - | chr8.1:79796981-79797000 | None:intergenic | 50.0% | |
| ACCAACCTTGAGGTCGATGT+TGG | - | chr8.1:79795603-79795622 | None:intergenic | 50.0% | |
| ACGCACTAAAGGGGGAATTG+TGG | - | chr8.1:79796337-79796356 | None:intergenic | 50.0% | |
| AGCAGCAGGAGGTTTGCATT+TGG | - | chr8.1:79795765-79795784 | None:intergenic | 50.0% | |
| AGCCTATAGGCTATAGCAGG+TGG | - | chr8.1:79796764-79796783 | None:intergenic | 50.0% | |
| AGGTTGTCAATCGCGGATAG+CGG | + | chr8.1:79796560-79796579 | MS.gene052696:intron | 50.0% | |
| ATGTCTGGTAGTCGTAGTCC+TGG | + | chr8.1:79796960-79796979 | MS.gene052696:intron | 50.0% | |
| GAACTGAGGGTCAAGGAGAA+TGG | - | chr8.1:79795558-79795577 | None:intergenic | 50.0% | |
| GAAGAAGACGCTCTTATCGC+TGG | + | chr8.1:79795500-79795519 | MS.gene052696:CDS | 50.0% | |
| GACCACCTGCTATAGCCTAT+AGG | + | chr8.1:79796759-79796778 | MS.gene052696:intron | 50.0% | |
| GCAGCAGGAGGTTTGCATTT+GGG | - | chr8.1:79795764-79795783 | None:intergenic | 50.0% | |
| GGGTAAGGTAACCAACCTTG+AGG | - | chr8.1:79795613-79795632 | None:intergenic | 50.0% | |
| GTATTCAGAGTTCGGGCAGA+AGG | - | chr8.1:79796075-79796094 | None:intergenic | 50.0% | |
| GTGAGTAAAGGACCGAACTG+AGG | - | chr8.1:79795572-79795591 | None:intergenic | 50.0% | |
| TCCAACATCGACCTCAAGGT+TGG | + | chr8.1:79795599-79795618 | MS.gene052696:intron | 50.0% | |
| TCGTTCCAACATCGACCTCA+AGG | + | chr8.1:79795595-79795614 | MS.gene052696:CDS | 50.0% | |
| TGCCCGAACTCTGAATACCA+TGG | + | chr8.1:79796077-79796096 | MS.gene052696:intron | 50.0% | |
| TGTCTGGTAGTCGTAGTCCT+GGG | + | chr8.1:79796961-79796980 | MS.gene052696:intron | 50.0% | |
| TTGAGTGAGGGTTCCTGCAT+TGG | + | chr8.1:79796417-79796436 | MS.gene052696:intron | 50.0% | |
| ! | AGTCACTGACTGCAAGGTTG+AGG | + | chr8.1:79797884-79797903 | MS.gene052696:CDS | 50.0% |
| ! | CATTGCTAGCTTCCATTGCC+AGG | + | chr8.1:79798647-79798666 | MS.gene052696:intron | 50.0% |
| ! | CGTTAACCCTCCGGTTTTCA+GGG | - | chr8.1:79796111-79796130 | None:intergenic | 50.0% |
| ! | GTTAACCCTCCGGTTTTCAG+GGG | - | chr8.1:79796110-79796129 | None:intergenic | 50.0% |
| !! | GGCTTGGCCTCCTTTTGTTT+TGG | - | chr8.1:79799092-79799111 | None:intergenic | 50.0% |
| !! | GTTTCTAGTGGGAAACCCTC+TGG | - | chr8.1:79798353-79798372 | None:intergenic | 50.0% |
| !! | TTTTCAGGGGAATGGGACCA+TGG | - | chr8.1:79796097-79796116 | None:intergenic | 50.0% |
| AACTGAGGCAGTCAAGGCGA+CGG | + | chr8.1:79799259-79799278 | MS.gene052696:CDS | 55.0% | |
| AACTGTGGAGCATAGGAGGC+AGG | - | chr8.1:79798114-79798133 | None:intergenic | 55.0% | |
| AAGGACCGAACTGAGGGTCA+AGG | - | chr8.1:79795565-79795584 | None:intergenic | 55.0% | |
| AAGGGGGAATTGTGGAGACC+AGG | - | chr8.1:79796329-79796348 | None:intergenic | 55.0% | |
| ACAGAGCCACTACACAGCAG+AGG | - | chr8.1:79798522-79798541 | None:intergenic | 55.0% | |
| ACAGGAGAAGAAGCAGCAGC+AGG | - | chr8.1:79795797-79795816 | None:intergenic | 55.0% | |
| CCATTCCCCTGAAAACCGGA+GGG | + | chr8.1:79796102-79796121 | MS.gene052696:intron | 55.0% | |
| GGAATCGAAAGACATGGCCC+TGG | + | chr8.1:79795521-79795540 | MS.gene052696:CDS | 55.0% | |
| GGTCCCATTCCCCTGAAAAC+CGG | + | chr8.1:79796098-79796117 | MS.gene052696:intron | 55.0% | |
| GTAGTGCCTCTGCTGTGTAG+TGG | + | chr8.1:79798513-79798532 | MS.gene052696:intron | 55.0% | |
| TCTGGCAACTGAGGCAGTCA+AGG | + | chr8.1:79799253-79799272 | MS.gene052696:CDS | 55.0% | |
| ! | GCGTTAACCCTCCGGTTTTC+AGG | - | chr8.1:79796112-79796131 | None:intergenic | 55.0% |
| !! | CCTCCGGTTTTCAGGGGAAT+GGG | - | chr8.1:79796104-79796123 | None:intergenic | 55.0% |
| ATTGGGCCAACCTTGCCACG+GGG | + | chr8.1:79798706-79798725 | MS.gene052696:intron | 60.0% | |
| CATTGGGCCAACCTTGCCAC+GGG | + | chr8.1:79798705-79798724 | MS.gene052696:intron | 60.0% | |
| CCATTGGGCCAACCTTGCCA+CGG | + | chr8.1:79798704-79798723 | MS.gene052696:intron | 60.0% | |
| CCCATTCCCCTGAAAACCGG+AGG | + | chr8.1:79796101-79796120 | MS.gene052696:intron | 60.0% | |
| GCAGGAGAAGAAGCAGCAGC+AGG | - | chr8.1:79795779-79795798 | None:intergenic | 60.0% | |
| GGAGAAGAAGCAGCAGCAGG+AGG | - | chr8.1:79795776-79795795 | None:intergenic | 60.0% | |
| GTCGTAGTCCTGGGCATGAG+AGG | + | chr8.1:79796970-79796989 | MS.gene052696:intron | 60.0% | |
| TGGGTGTCTGGGTTCGATCC+TGG | + | chr8.1:79796308-79796327 | MS.gene052696:intron | 60.0% | |
| TGTAGTCGTGGGGGTGAGAG+CGG | + | chr8.1:79796813-79796832 | MS.gene052696:intron | 60.0% | |
| ! | GGTTGGCCCAATGGAAGCAC+AGG | - | chr8.1:79798698-79798717 | None:intergenic | 60.0% |
| ! | TTAAGAGCGCAGAGTCCCCG+TGG | - | chr8.1:79798724-79798743 | None:intergenic | 60.0% |
| !! | CCCTCCGGTTTTCAGGGGAA+TGG | - | chr8.1:79796105-79796124 | None:intergenic | 60.0% |
| CAGAGTCCCCGTGGCAAGGT+TGG | - | chr8.1:79798715-79798734 | None:intergenic | 65.0% | |
| ! | CCGTGGCAAGGTTGGCCCAA+TGG | - | chr8.1:79798707-79798726 | None:intergenic | 65.0% |
| AGCGCAGAGTCCCCGTGGCA+AGG | - | chr8.1:79798719-79798738 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 79795467 | 79799478 | 79795467 | ID=MS.gene052696 |
| chr8.1 | mRNA | 79795467 | 79799478 | 79795467 | ID=MS.gene052696.t1;Parent=MS.gene052696 |
| chr8.1 | exon | 79795467 | 79795616 | 79795467 | ID=MS.gene052696.t1.exon1;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79795467 | 79795616 | 79795467 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| chr8.1 | exon | 79795710 | 79795936 | 79795710 | ID=MS.gene052696.t1.exon2;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79795710 | 79795936 | 79795710 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| chr8.1 | exon | 79797499 | 79797583 | 79797499 | ID=MS.gene052696.t1.exon3;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79797499 | 79797583 | 79797499 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| chr8.1 | exon | 79797853 | 79797936 | 79797853 | ID=MS.gene052696.t1.exon4;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79797853 | 79797936 | 79797853 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| chr8.1 | exon | 79799035 | 79799350 | 79799035 | ID=MS.gene052696.t1.exon5;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79799035 | 79799350 | 79799035 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| chr8.1 | exon | 79799447 | 79799478 | 79799447 | ID=MS.gene052696.t1.exon6;Parent=MS.gene052696.t1 |
| chr8.1 | CDS | 79799447 | 79799478 | 79799447 | ID=cds.MS.gene052696.t1;Parent=MS.gene052696.t1 |
| Gene Sequence |
| Protein sequence |
