Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053138.t1 | XP_003597798.2 | 73.6 | 341 | 88 | 2 | 19 | 359 | 10 | 348 | 1.60E-110 | 409.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053138.t1 | Q5KQI4 | 44.4 | 257 | 128 | 8 | 37 | 288 | 30 | 276 | 5.0e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053138.t1 | G7IMD4 | 73.6 | 341 | 88 | 2 | 19 | 359 | 10 | 348 | 1.1e-110 | 409.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053138.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053138.t1 | MTR_2g102450 | 80.000 | 350 | 67 | 3 | 10 | 359 | 2 | 348 | 6.99e-180 | 508 |
| MS.gene053138.t1 | MTR_2g102450 | 82.657 | 271 | 45 | 2 | 89 | 359 | 26 | 294 | 2.16e-143 | 414 |
| MS.gene053138.t1 | MTR_4g008310 | 89.205 | 176 | 18 | 1 | 65 | 239 | 129 | 304 | 1.20e-98 | 298 |
| MS.gene053138.t1 | MTR_3g101520 | 43.956 | 182 | 94 | 4 | 65 | 245 | 53 | 227 | 6.14e-38 | 138 |
| MS.gene053138.t1 | MTR_3g101520 | 43.407 | 182 | 87 | 3 | 65 | 245 | 53 | 219 | 1.05e-37 | 137 |
| MS.gene053138.t1 | MTR_4g101970 | 35.233 | 193 | 90 | 8 | 192 | 358 | 51 | 234 | 2.54e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053138.t1 | AT5G58280 | 46.729 | 214 | 110 | 3 | 35 | 247 | 45 | 255 | 9.01e-54 | 182 |
| MS.gene053138.t1 | AT5G58280 | 47.442 | 215 | 106 | 4 | 35 | 247 | 45 | 254 | 6.47e-53 | 180 |
| MS.gene053138.t1 | AT5G58280 | 48.571 | 175 | 87 | 2 | 74 | 247 | 50 | 222 | 2.95e-46 | 161 |
| MS.gene053138.t1 | AT3G19184 | 39.749 | 239 | 126 | 4 | 53 | 291 | 48 | 268 | 3.31e-38 | 140 |
| MS.gene053138.t1 | AT3G19184 | 39.749 | 239 | 126 | 4 | 53 | 291 | 48 | 268 | 5.07e-38 | 139 |
| MS.gene053138.t1 | AT5G42700 | 36.087 | 230 | 127 | 5 | 18 | 242 | 6 | 220 | 2.09e-33 | 125 |
| MS.gene053138.t1 | AT5G42700 | 38.674 | 181 | 98 | 3 | 64 | 242 | 6 | 175 | 6.22e-32 | 120 |
Find 85 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACATTAGTCTTTGATTT+TGG | 0.195804 | 4.2:+91493163 | None:intergenic |
| ATACGAAGGAACTGGGTTTC+TGG | 0.220802 | 4.2:+91493114 | None:intergenic |
| CGTCATGTGCTCTCTTCTTC+AGG | 0.227431 | 4.2:-91488239 | MS.gene053138:CDS |
| GGTTGAAGCAGCAAGATTTA+AGG | 0.234558 | 4.2:-91492145 | MS.gene053138:intron |
| TTCCTTTGATTTGACAGTTT+TGG | 0.256362 | 4.2:+91490758 | None:intergenic |
| TCGAGGTGTGCATCCTCTTT+TGG | 0.268589 | 4.2:+91490666 | None:intergenic |
| TCAAAGACTGCAAATTGATT+TGG | 0.272907 | 4.2:+91492529 | None:intergenic |
| TTTAGATTCTTTGATTGCTT+TGG | 0.273612 | 4.2:+91490857 | None:intergenic |
| TGCGATTTCAGTCAATGTTT+TGG | 0.279142 | 4.2:+91493307 | None:intergenic |
| TCAAATCAAAGGAAGCTTAT+AGG | 0.281469 | 4.2:-91490749 | MS.gene053138:CDS |
| TTGGACTTTGGCTCAAGTTT+AGG | 0.284818 | 4.2:+91490777 | None:intergenic |
| TTTACCTTGGATTTCTTTGC+TGG | 0.294171 | 4.2:+91493281 | None:intergenic |
| ATCAAAGACTAATGTTGTTC+TGG | 0.324841 | 4.2:-91493158 | MS.gene053138:CDS |
| CGTCGAGGGGATAAAGAAAA+TGG | 0.349015 | 4.2:+91488486 | None:intergenic |
| ACCATGGCGGTGGAAGAAAA+AGG | 0.359073 | 4.2:+91488409 | None:intergenic |
| GGCAACTTTGTAGCTGCCTC+TGG | 0.368043 | 4.2:+91490633 | None:intergenic |
| GGGAAGATGGTGGCCGGTGG+TGG | 0.382224 | 4.2:+91488553 | None:intergenic |
| GATCTGTGAGCATGGTGGTT+GGG | 0.396829 | 4.2:+91488522 | None:intergenic |
| ATTTGCATTGAAACATAAAC+TGG | 0.400811 | 4.2:-91492196 | MS.gene053138:CDS |
| CGTGAAAATTATTGAACCAT+TGG | 0.406431 | 4.2:+91488455 | None:intergenic |
| ATGGTGGTTGGGGCGACGCC+GGG | 0.407616 | 4.2:+91488533 | None:intergenic |
| CATGGTGGTTGGGGCGACGC+CGG | 0.413619 | 4.2:+91488532 | None:intergenic |
| TCTTCACGATACGAAGGAAC+TGG | 0.423062 | 4.2:+91493106 | None:intergenic |
| CACTTATCAAGTCAATGGTT+TGG | 0.424323 | 4.2:-91492500 | MS.gene053138:CDS |
| TCAAGAAAGAAAGCGTGCTT+TGG | 0.426683 | 4.2:-91492568 | MS.gene053138:CDS |
| TTGGGGCGACGCCGGGAAGA+TGG | 0.427358 | 4.2:+91488540 | None:intergenic |
| CCTCTGGTTTCACAGTTTCG+AGG | 0.431144 | 4.2:+91490649 | None:intergenic |
| AAAAGAAGAAAGCGATGCTT+TGG | 0.444588 | 4.2:-91490904 | MS.gene053138:CDS |
| ACCTTCCACAGTTGCGGAAG+AGG | 0.453437 | 4.2:-91492758 | MS.gene053138:CDS |
| ACCACCGGCCACCATCTTCC+CGG | 0.457691 | 4.2:-91488551 | MS.gene053138:CDS |
| TCCATCACTTATCAAGTCAA+TGG | 0.461188 | 4.2:-91492505 | MS.gene053138:CDS |
| GTTTGGTCTCACGTTTATAG+AGG | 0.467915 | 4.2:-91492483 | MS.gene053138:CDS |
| CAAGGTCAAGTTCATCATCA+TGG | 0.471764 | 4.2:-91492734 | MS.gene053138:CDS |
| ACCTCTTCCGCAACTGTGGA+AGG | 0.475917 | 4.2:+91492757 | None:intergenic |
| ATCTGTGAGCATGGTGGTTG+GGG | 0.485058 | 4.2:+91488523 | None:intergenic |
| AAAGAAAACTAGAATGCAAA+AGG | 0.490045 | 4.2:-91490811 | MS.gene053138:CDS |
| TGACGGCGAAGCCACTGTTC+CGG | 0.490912 | 4.2:+91488257 | None:intergenic |
| AGAAGAAAGCGATGCTTTGG+TGG | 0.493049 | 4.2:-91490901 | MS.gene053138:CDS |
| GTCATGTGCTCTCTTCTTCA+GGG | 0.493690 | 4.2:-91488238 | MS.gene053138:intron |
| ACCATTGACTTGATAAGTGA+TGG | 0.497922 | 4.2:+91492504 | None:intergenic |
| ATTTGAAAATATAGATGAAG+AGG | 0.499410 | 4.2:-91490931 | MS.gene053138:CDS |
| CTAATGTTGTTCTGGAACCT+AGG | 0.501598 | 4.2:-91493150 | MS.gene053138:CDS |
| AAGGTCAAGTTCATCATCAT+GGG | 0.503820 | 4.2:-91492733 | MS.gene053138:CDS |
| TGTTCCTCGCAAAATCTCCT+TGG | 0.505957 | 4.2:+91492324 | None:intergenic |
| AGCAAGAAAACTGCGCTTAG+TGG | 0.510768 | 4.2:-91492231 | MS.gene053138:CDS |
| AAGCCACTGTTCCGGCGTAA+TGG | 0.513169 | 4.2:+91488265 | None:intergenic |
| AAACTGCGCTTAGTGGTGGC+TGG | 0.513224 | 4.2:-91492224 | MS.gene053138:CDS |
| CGATCTGTGAGCATGGTGGT+TGG | 0.514050 | 4.2:+91488521 | None:intergenic |
| GTCCAAAACTGTCAAATCAA+AGG | 0.535787 | 4.2:-91490760 | MS.gene053138:CDS |
| CACAGTTGCGGAAGAGGTCA+AGG | 0.544125 | 4.2:-91492752 | MS.gene053138:CDS |
| AGCGATGCTTTGGTGGAAGA+AGG | 0.546631 | 4.2:-91490894 | MS.gene053138:CDS |
| TACTGCAGTTGAGCCAAAAG+AGG | 0.549920 | 4.2:-91490679 | MS.gene053138:CDS |
| GACGCCGGGAAGATGGTGGC+CGG | 0.551199 | 4.2:+91488547 | None:intergenic |
| TTCCTAGCATAAACCACCAC+CGG | 0.552945 | 4.2:-91488566 | MS.gene053138:intron |
| GGGCGACGCCGGGAAGATGG+TGG | 0.555362 | 4.2:+91488543 | None:intergenic |
| AAACAAGCTTACCATGGCGG+TGG | 0.564379 | 4.2:+91488399 | None:intergenic |
| GCACAGACCTTCCACAGTTG+CGG | 0.564774 | 4.2:-91492764 | MS.gene053138:CDS |
| GCGTGCTTTGGATGCTGCAG+AGG | 0.570639 | 4.2:-91492556 | MS.gene053138:CDS |
| CTTGACCTCTTCCGCAACTG+TGG | 0.570829 | 4.2:+91492753 | None:intergenic |
| CATTGGAAAGCTCTCGTCGA+GGG | 0.573205 | 4.2:+91488472 | None:intergenic |
| TTTGAGGTTGCAGCCACATG+TGG | 0.574036 | 4.2:-91493496 | MS.gene053138:CDS |
| GCCGGGAAGATGGTGGCCGG+TGG | 0.575989 | 4.2:+91488550 | None:intergenic |
| TTGAAACATAAACTGGATGA+TGG | 0.585314 | 4.2:-91492189 | MS.gene053138:CDS |
| CTTCACGATACGAAGGAACT+GGG | 0.585948 | 4.2:+91493107 | None:intergenic |
| CAACCACCATGCTCACAGAT+CGG | 0.588580 | 4.2:-91488520 | MS.gene053138:CDS |
| GGATAATAGTTGTGATAATG+AGG | 0.589430 | 4.2:-91493475 | MS.gene053138:intron |
| ACATGTGGCTGCAACCTCAA+AGG | 0.594069 | 4.2:+91493498 | None:intergenic |
| TCAGTTACGCTTACGTTGCG+AGG | 0.594424 | 4.2:-91492620 | MS.gene053138:intron |
| CAAGTTCATCATCATGGGGA+AGG | 0.599718 | 4.2:-91492728 | MS.gene053138:intron |
| CTGGCACGAGAAGAGCGCCT+AGG | 0.600809 | 4.2:+91493133 | None:intergenic |
| CCTCGACGAGAGCTTTCCAA+TGG | 0.607530 | 4.2:-91488471 | MS.gene053138:CDS |
| AGTTCCTTCGTATCGTGAAG+AGG | 0.609998 | 4.2:-91493104 | MS.gene053138:intron |
| AAGAAAACTGCGCTTAGTGG+TGG | 0.610549 | 4.2:-91492228 | MS.gene053138:CDS |
| ATCTAAAACTGTGAAACCAA+AGG | 0.619114 | 4.2:-91490841 | MS.gene053138:CDS |
| CAACCATTACGCCGGAACAG+TGG | 0.619668 | 4.2:-91488268 | MS.gene053138:CDS |
| AAGTCCAGCAAAGAAATCCA+AGG | 0.643226 | 4.2:-91493285 | MS.gene053138:intron |
| GTCATCAACAACCATTACGC+CGG | 0.645570 | 4.2:-91488276 | MS.gene053138:CDS |
| ATTGGAAAGCTCTCGTCGAG+GGG | 0.654103 | 4.2:+91488473 | None:intergenic |
| CCATTGGAAAGCTCTCGTCG+AGG | 0.666600 | 4.2:+91488471 | None:intergenic |
| CTGAAGAAGAGAGCACATGA+CGG | 0.671430 | 4.2:+91488240 | None:intergenic |
| TCACAACTATTATCCACATG+TGG | 0.676187 | 4.2:+91493483 | None:intergenic |
| CTTACCTCTTCACGATACGA+AGG | 0.683573 | 4.2:+91493100 | None:intergenic |
| AGGTCAAGTTCATCATCATG+GGG | 0.691621 | 4.2:-91492732 | MS.gene053138:CDS |
| CCTCGAAACTGTGAAACCAG+AGG | 0.716116 | 4.2:-91490649 | MS.gene053138:CDS |
| TTTCCGATCTGTGAGCATGG+TGG | 0.719555 | 4.2:+91488517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTTAATTAATAAT+CGG | + | chr4.2:91492441-91492460 | None:intergenic | 0.0% |
| !! | GAAAAATATAAATTTATTGA+AGG | - | chr4.2:91490375-91490394 | MS.gene053138:intron | 10.0% |
| !! | GATATTAAAATATTACAAAA+AGG | + | chr4.2:91489815-91489834 | None:intergenic | 10.0% |
| !!! | ATATATTATCTTTATTTTGT+AGG | - | chr4.2:91489297-91489316 | MS.gene053138:intron | 10.0% |
| !!! | TAATTTCTTTTAATAATGTT+TGG | + | chr4.2:91491541-91491560 | None:intergenic | 10.0% |
| !!! | TATATTATCTTTATTTTGTA+GGG | - | chr4.2:91489298-91489317 | MS.gene053138:intron | 10.0% |
| !! | AATTAAATAACAATAGTAGA+AGG | + | chr4.2:91493470-91493489 | None:intergenic | 15.0% |
| !! | AATTAGAGTTCAATAAAAAT+TGG | + | chr4.2:91493533-91493552 | None:intergenic | 15.0% |
| !! | AATTTATTGAAGGTTAATTT+AGG | - | chr4.2:91490385-91490404 | MS.gene053138:intron | 15.0% |
| !! | AGAATAAAATCACTAAAATA+TGG | + | chr4.2:91492980-91492999 | None:intergenic | 15.0% |
| !! | ATCAACTAACATATAATATA+TGG | - | chr4.2:91491572-91491591 | MS.gene053138:intron | 15.0% |
| !! | ATTAGAGTTCAATAAAAATT+GGG | + | chr4.2:91493532-91493551 | None:intergenic | 15.0% |
| !! | CATATGAATATAATTATGTT+AGG | + | chr4.2:91490645-91490664 | None:intergenic | 15.0% |
| !! | CTAACATAATTATATTCATA+TGG | - | chr4.2:91490643-91490662 | MS.gene053138:CDS | 15.0% |
| !!! | AAAATAGTCTAAAACTAAAA+TGG | + | chr4.2:91492885-91492904 | None:intergenic | 15.0% |
| !!! | AAACTTGCAATTTTTTAAAT+CGG | - | chr4.2:91488388-91488407 | MS.gene053138:intron | 15.0% |
| !!! | AAATAGTCTAAAACTAAAAT+GGG | + | chr4.2:91492884-91492903 | None:intergenic | 15.0% |
| !!! | AAATTGAAATTTTATTGACA+TGG | - | chr4.2:91488995-91489014 | MS.gene053138:intron | 15.0% |
| !!! | AATTTTTAATTAATAATCGG+CGG | + | chr4.2:91492438-91492457 | None:intergenic | 15.0% |
| !!! | ATATGAAGTAAAGTTTTATT+TGG | + | chr4.2:91492057-91492076 | None:intergenic | 15.0% |
| !!! | TTTATTGAATTTGTTTCATT+TGG | - | chr4.2:91492521-91492540 | MS.gene053138:CDS | 15.0% |
| !!! | TTTTTGATAAACAAATTTAG+AGG | + | chr4.2:91491505-91491524 | None:intergenic | 15.0% |
| !!! | TTTTTTATTCTTTTGACTTA+GGG | - | chr4.2:91492923-91492942 | MS.gene053138:intron | 15.0% |
| !! | AAAAAAAGATAGACTATTGA+TGG | - | chr4.2:91491880-91491899 | MS.gene053138:intron | 20.0% |
| !! | AAAATCATAAAAAACCTTTG+AGG | - | chr4.2:91488137-91488156 | MS.gene053138:intron | 20.0% |
| !! | AATTCGGATTTGAAAAATAA+GGG | + | chr4.2:91493558-91493577 | None:intergenic | 20.0% |
| !! | ATCTATCTATCTATTTATGA+AGG | + | chr4.2:91491723-91491742 | None:intergenic | 20.0% |
| !! | ATTTGAAAATATAGATGAAG+AGG | - | chr4.2:91490718-91490737 | MS.gene053138:CDS | 20.0% |
| !! | TAGGAATATCTCAATATAAT+AGG | + | chr4.2:91492729-91492748 | None:intergenic | 20.0% |
| !! | TATTTCACTTTATTACAGTT+AGG | - | chr4.2:91488863-91488882 | MS.gene053138:intron | 20.0% |
| !! | TCCAAAAATTGACTATAAAA+TGG | - | chr4.2:91489351-91489370 | MS.gene053138:intron | 20.0% |
| !! | TTAGAGTTCAATAAAAATTG+GGG | + | chr4.2:91493531-91493550 | None:intergenic | 20.0% |
| !!! | AAATTTTATTGACATGGTTA+TGG | - | chr4.2:91489001-91489020 | MS.gene053138:intron | 20.0% |
| !!! | AATTTTATTGACATGGTTAT+GGG | - | chr4.2:91489002-91489021 | MS.gene053138:intron | 20.0% |
| !!! | ACCAATTTAGAATTTGAAAA+GGG | + | chr4.2:91490036-91490055 | None:intergenic | 20.0% |
| !!! | ACCATTTTATAGTCAATTTT+TGG | + | chr4.2:91489355-91489374 | None:intergenic | 20.0% |
| !!! | ATAATTCTTTTTGTTTCTAC+TGG | + | chr4.2:91490591-91490610 | None:intergenic | 20.0% |
| !!! | ATTAGAATTTACCTTTTTCA+AGG | + | chr4.2:91491840-91491859 | None:intergenic | 20.0% |
| !!! | ATTAGTTTGAGAAACTTAAA+TGG | + | chr4.2:91490288-91490307 | None:intergenic | 20.0% |
| !!! | CTTTTTTATTCTTTTGACTT+AGG | - | chr4.2:91492922-91492941 | MS.gene053138:intron | 20.0% |
| !!! | GATCTTTTTATTAATCCAAT+TGG | - | chr4.2:91492390-91492409 | MS.gene053138:intron | 20.0% |
| !!! | TACCAATTTAGAATTTGAAA+AGG | + | chr4.2:91490037-91490056 | None:intergenic | 20.0% |
| !!! | TATTCCTCTAAAATACTTTT+GGG | - | chr4.2:91491313-91491332 | MS.gene053138:intron | 20.0% |
| !!! | TGAGATATTTCTATTGTAAT+GGG | - | chr4.2:91492667-91492686 | MS.gene053138:intron | 20.0% |
| !!! | TTATTCCTCTAAAATACTTT+TGG | - | chr4.2:91491312-91491331 | MS.gene053138:intron | 20.0% |
| !!! | TTCTTTTAATAATGTTTGGA+GGG | + | chr4.2:91491537-91491556 | None:intergenic | 20.0% |
| !!! | TTGAGATATTCCTATTTTAA+TGG | - | chr4.2:91492735-91492754 | MS.gene053138:CDS | 20.0% |
| !!! | TTTCCAATCTATTTTATCTA+TGG | + | chr4.2:91492200-91492219 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAATAATGTTTGG+AGG | + | chr4.2:91491538-91491557 | None:intergenic | 20.0% |
| ! | AAAAAATTGCAAGTTTACCT+TGG | + | chr4.2:91488384-91488403 | None:intergenic | 25.0% |
| ! | AAAGAAAACTAGAATGCAAA+AGG | - | chr4.2:91490838-91490857 | MS.gene053138:CDS | 25.0% |
| ! | AACAAAAAGAATTATATGCC+AGG | - | chr4.2:91490596-91490615 | MS.gene053138:intron | 25.0% |
| ! | AAGAAGAAACTCAATATCAA+AGG | + | chr4.2:91489777-91489796 | None:intergenic | 25.0% |
| ! | AATATAGATGTTCAAAGAAG+GGG | + | chr4.2:91491644-91491663 | None:intergenic | 25.0% |
| ! | AATATCTACTAGGAATATGT+TGG | - | chr4.2:91488680-91488699 | MS.gene053138:intron | 25.0% |
| ! | ACATTAAAGAATGAACAACA+AGG | + | chr4.2:91489232-91489251 | None:intergenic | 25.0% |
| ! | ATAGTAGTGTCCATTAAAAT+AGG | + | chr4.2:91492748-91492767 | None:intergenic | 25.0% |
| ! | ATAGTGCAAAAATATCTACT+AGG | - | chr4.2:91488670-91488689 | MS.gene053138:intron | 25.0% |
| ! | ATATGCATTATTATATGCAG+GGG | - | chr4.2:91491780-91491799 | MS.gene053138:intron | 25.0% |
| ! | ATCTTCAAATTCAACAATCA+AGG | + | chr4.2:91488799-91488818 | None:intergenic | 25.0% |
| ! | ATTTGCATTGAAACATAAAC+TGG | - | chr4.2:91489453-91489472 | MS.gene053138:intron | 25.0% |
| ! | CAAATAAATATTCCTGATGT+TGG | + | chr4.2:91488835-91488854 | None:intergenic | 25.0% |
| ! | CAGCTAACAATTACTATATT+TGG | + | chr4.2:91489951-91489970 | None:intergenic | 25.0% |
| ! | CCAAAATAGTTGTTATAAGT+AGG | - | chr4.2:91490177-91490196 | MS.gene053138:intron | 25.0% |
| ! | GAATATAGATGTTCAAAGAA+GGG | + | chr4.2:91491645-91491664 | None:intergenic | 25.0% |
| ! | GAATTCGGATTTGAAAAATA+AGG | + | chr4.2:91493559-91493578 | None:intergenic | 25.0% |
| ! | GATATGCATTATTATATGCA+GGG | - | chr4.2:91491779-91491798 | MS.gene053138:intron | 25.0% |
| ! | GGAAAAGGAATAATTTCAAA+TGG | - | chr4.2:91489704-91489723 | MS.gene053138:intron | 25.0% |
| ! | GTACCATAGATAAAATAGAT+TGG | - | chr4.2:91492194-91492213 | MS.gene053138:CDS | 25.0% |
| ! | TAGAAATATCTCACTGTAAT+AGG | + | chr4.2:91492660-91492679 | None:intergenic | 25.0% |
| ! | TGAATATAGATGTTCAAAGA+AGG | + | chr4.2:91491646-91491665 | None:intergenic | 25.0% |
| ! | TGACCAAATTAATTCTTACA+AGG | - | chr4.2:91489863-91489882 | MS.gene053138:intron | 25.0% |
| ! | TGATATGCATTATTATATGC+AGG | - | chr4.2:91491778-91491797 | MS.gene053138:intron | 25.0% |
| ! | TTTAGATTCTTTGATTGCTT+TGG | + | chr4.2:91490795-91490814 | None:intergenic | 25.0% |
| !! | AAGCCTTGTAAGAATTAATT+TGG | + | chr4.2:91489869-91489888 | None:intergenic | 25.0% |
| !! | AATTCTCATACTTTTGTCTT+AGG | + | chr4.2:91488720-91488739 | None:intergenic | 25.0% |
| !! | ACCCTTTTCAAATTCTAAAT+TGG | - | chr4.2:91490032-91490051 | MS.gene053138:intron | 25.0% |
| !! | ATTCTCATACTTTTGTCTTA+GGG | + | chr4.2:91488719-91488738 | None:intergenic | 25.0% |
| !! | CAATTACTATATTTGGAACT+TGG | + | chr4.2:91489944-91489963 | None:intergenic | 25.0% |
| !! | CCTACTTATAACAACTATTT+TGG | + | chr4.2:91490180-91490199 | None:intergenic | 25.0% |
| !! | GATTCACAACATCAAAATTT+TGG | - | chr4.2:91491468-91491487 | MS.gene053138:intron | 25.0% |
| !! | GTGAGATATTTCTATTGTAA+TGG | - | chr4.2:91492666-91492685 | MS.gene053138:intron | 25.0% |
| !! | TTTTCCTCAAAAACAAATCA+TGG | + | chr4.2:91489690-91489709 | None:intergenic | 25.0% |
| !!! | ACAACATTAGTCTTTGATTT+TGG | + | chr4.2:91488489-91488508 | None:intergenic | 25.0% |
| !!! | ATGATTTGTTTTTGAGGAAA+AGG | - | chr4.2:91489689-91489708 | MS.gene053138:intron | 25.0% |
| !!! | ATTCCTCTAAAATACTTTTG+GGG | - | chr4.2:91491314-91491333 | MS.gene053138:intron | 25.0% |
| !!! | TACTTTTAGGGTTGAAATTA+CGG | - | chr4.2:91490236-91490255 | MS.gene053138:intron | 25.0% |
| !!! | TGACTATAAAATGGTTTTAG+AGG | - | chr4.2:91489360-91489379 | MS.gene053138:intron | 25.0% |
| AAAAAGAATTATATGCCAGG+TGG | - | chr4.2:91490599-91490618 | MS.gene053138:intron | 30.0% | |
| AAGAAAAAGAAGGCAAAAGA+AGG | - | chr4.2:91491043-91491062 | MS.gene053138:intron | 30.0% | |
| AGAAAAGGGAAAAACAATAG+TGG | + | chr4.2:91493347-91493366 | None:intergenic | 30.0% | |
| AGAACATCTAAGTTCATTAG+TGG | + | chr4.2:91489734-91489753 | None:intergenic | 30.0% | |
| ATAGTAATTGTTAGCTGTGA+GGG | - | chr4.2:91489954-91489973 | MS.gene053138:intron | 30.0% | |
| ATCAAAGACTAATGTTGTTC+TGG | - | chr4.2:91488491-91488510 | MS.gene053138:CDS | 30.0% | |
| ATTTGCAACCAAAAAACAAG+TGG | + | chr4.2:91490515-91490534 | None:intergenic | 30.0% | |
| CGTGAAAATTATTGAACCAT+TGG | + | chr4.2:91493197-91493216 | None:intergenic | 30.0% | |
| CTAAATCCTTGAGAACAAAA+GGG | + | chr4.2:91488307-91488326 | None:intergenic | 30.0% | |
| GAAAAGGGAAAAACAATAGT+GGG | + | chr4.2:91493346-91493365 | None:intergenic | 30.0% | |
| GACATATCACTAGTAAATGT+GGG | + | chr4.2:91490158-91490177 | None:intergenic | 30.0% | |
| GATAATAACTGATATCAGCT+TGG | - | chr4.2:91489612-91489631 | MS.gene053138:intron | 30.0% | |
| GATATAGTTTGAACTTTGCA+AGG | + | chr4.2:91488583-91488602 | None:intergenic | 30.0% | |
| TAAATCCTTGAGAACAAAAG+GGG | + | chr4.2:91488306-91488325 | None:intergenic | 30.0% | |
| TATAGTAATTGTTAGCTGTG+AGG | - | chr4.2:91489953-91489972 | MS.gene053138:intron | 30.0% | |
| TATCTTCGAAAGTTATCTCA+TGG | + | chr4.2:91489992-91490011 | None:intergenic | 30.0% | |
| TCAAAGACTGCAAATTGATT+TGG | + | chr4.2:91489123-91489142 | None:intergenic | 30.0% | |
| TCAAATCAAAGGAAGCTTAT+AGG | - | chr4.2:91490900-91490919 | MS.gene053138:CDS | 30.0% | |
| TGAATCTTATGCAACATTGA+AGG | + | chr4.2:91491454-91491473 | None:intergenic | 30.0% | |
| TTAAAATTGTCCCCTAAAAG+TGG | - | chr4.2:91491166-91491185 | MS.gene053138:intron | 30.0% | |
| TTGAAACATAAACTGGATGA+TGG | - | chr4.2:91489460-91489479 | MS.gene053138:intron | 30.0% | |
| TTTGCAACCAAAAAACAAGT+GGG | + | chr4.2:91490514-91490533 | None:intergenic | 30.0% | |
| ! | AGGGATATTTTATCAAGTGA+TGG | - | chr4.2:91492942-91492961 | MS.gene053138:intron | 30.0% |
| ! | ATCTAAAACTGTGAAACCAA+AGG | - | chr4.2:91490808-91490827 | MS.gene053138:CDS | 30.0% |
| ! | ATTGTCCCCTAAAATACTTT+TGG | - | chr4.2:91491383-91491402 | MS.gene053138:intron | 30.0% |
| ! | GCGTTACTCTATTATTTCTT+TGG | - | chr4.2:91491277-91491296 | MS.gene053138:intron | 30.0% |
| ! | GGAAACTTGTTCTATAAGAA+AGG | - | chr4.2:91490346-91490365 | MS.gene053138:intron | 30.0% |
| ! | GGATAATAGTTGTGATAATG+AGG | - | chr4.2:91488174-91488193 | MS.gene053138:intron | 30.0% |
| ! | GGTAGTTTGCATAAATCTAT+AGG | + | chr4.2:91488206-91488225 | None:intergenic | 30.0% |
| ! | GGTTCAATAATTTTCACGAA+AGG | - | chr4.2:91493199-91493218 | MS.gene053138:intron | 30.0% |
| ! | TCACAACATCAAAATTTTGG+TGG | - | chr4.2:91491471-91491490 | MS.gene053138:intron | 30.0% |
| ! | TGATGCAGTAGTTTTTGAAT+TGG | - | chr4.2:91489483-91489502 | MS.gene053138:intron | 30.0% |
| ! | TTGTCCCCTAAAATACTTTT+GGG | - | chr4.2:91491384-91491403 | MS.gene053138:intron | 30.0% |
| ! | TTTGCCTTCTTTTTCTTGTT+TGG | + | chr4.2:91491040-91491059 | None:intergenic | 30.0% |
| !! | ATTTTAGAGGACGTTTATCA+GGG | + | chr4.2:91491236-91491255 | None:intergenic | 30.0% |
| !! | CTTTGAAGTTAAAAGAGAGT+TGG | + | chr4.2:91489553-91489572 | None:intergenic | 30.0% |
| !! | TAAATCGGTTTTACTCTGTA+AGG | - | chr4.2:91488403-91488422 | MS.gene053138:CDS | 30.0% |
| !! | TATTTTAGAGGACGTTTATC+AGG | + | chr4.2:91491237-91491256 | None:intergenic | 30.0% |
| !!! | AACGTCCTCTAAAATACTTT+TGG | - | chr4.2:91491241-91491260 | MS.gene053138:intron | 30.0% |
| !!! | AATCCAATTGGTTTTTCGAA+TGG | - | chr4.2:91492402-91492421 | MS.gene053138:intron | 30.0% |
| !!! | AATGGTTTTAGAGGATGAAA+AGG | - | chr4.2:91489369-91489388 | MS.gene053138:intron | 30.0% |
| !!! | ACGTCCTCTAAAATACTTTT+GGG | - | chr4.2:91491242-91491261 | MS.gene053138:intron | 30.0% |
| !!! | AGCTTTTGGAGTTTACTTTT+AGG | - | chr4.2:91490223-91490242 | MS.gene053138:intron | 30.0% |
| !!! | ATGGTTTTAGAGGATGAAAA+GGG | - | chr4.2:91489370-91489389 | MS.gene053138:intron | 30.0% |
| !!! | ATTGTCCCCAAAAGTATTTT+AGG | + | chr4.2:91491393-91491412 | None:intergenic | 30.0% |
| !!! | CAACTCTCTTTTAACTTCAA+AGG | - | chr4.2:91489551-91489570 | MS.gene053138:intron | 30.0% |
| !!! | GCTTTTGGAGTTTACTTTTA+GGG | - | chr4.2:91490224-91490243 | MS.gene053138:intron | 30.0% |
| !!! | GCTTTTTTGATTTCATTCAG+TGG | + | chr4.2:91489055-91489074 | None:intergenic | 30.0% |
| !!! | TTCCTTTGATTTGACAGTTT+TGG | + | chr4.2:91490894-91490913 | None:intergenic | 30.0% |
| !!! | TTGTCCATGATTTGTTTTTG+AGG | - | chr4.2:91489683-91489702 | MS.gene053138:intron | 30.0% |
| !!! | TTGTCCCCAAAAGTATTTTA+GGG | + | chr4.2:91491392-91491411 | None:intergenic | 30.0% |
| AAAAGAAGAAAGCGATGCTT+TGG | - | chr4.2:91490745-91490764 | MS.gene053138:CDS | 35.0% | |
| AAAGAGAGTTGGATGAGAAT+TGG | + | chr4.2:91489542-91489561 | None:intergenic | 35.0% | |
| AAATCTCAGTGCAAGAAAGA+AGG | + | chr4.2:91493317-91493336 | None:intergenic | 35.0% | |
| AACAATCAAGGATTTCTCGA+AGG | + | chr4.2:91488787-91488806 | None:intergenic | 35.0% | |
| AAGAAACCACTCATAGTTAC+CGG | + | chr4.2:91493278-91493297 | None:intergenic | 35.0% | |
| AAGGTCAAGTTCATCATCAT+GGG | - | chr4.2:91488916-91488935 | MS.gene053138:intron | 35.0% | |
| ACGATTCTGCACAAAGAAAT+AGG | + | chr4.2:91488457-91488476 | None:intergenic | 35.0% | |
| ACTACACCATTTATTGTCTC+TGG | - | chr4.2:91491121-91491140 | MS.gene053138:intron | 35.0% | |
| AGAGAAAAATCACACAACAC+TGG | + | chr4.2:91488763-91488782 | None:intergenic | 35.0% | |
| AGGGGTTGCGAAAATATATT+TGG | + | chr4.2:91491217-91491236 | None:intergenic | 35.0% | |
| CACTTATCAAGTCAATGGTT+TGG | - | chr4.2:91489149-91489168 | MS.gene053138:intron | 35.0% | |
| CCTAAATCCTTGAGAACAAA+AGG | + | chr4.2:91488308-91488327 | None:intergenic | 35.0% | |
| CGATTCTGCACAAAGAAATA+GGG | + | chr4.2:91488456-91488475 | None:intergenic | 35.0% | |
| CTCAAGAAAGAGGAATATGT+TGG | - | chr4.2:91488639-91488658 | MS.gene053138:intron | 35.0% | |
| GAAGGTGATGTATGTGAAAT+TGG | - | chr4.2:91491061-91491080 | MS.gene053138:intron | 35.0% | |
| GGACATATCACTAGTAAATG+TGG | + | chr4.2:91490159-91490178 | None:intergenic | 35.0% | |
| GTCCAAAACTGTCAAATCAA+AGG | - | chr4.2:91490889-91490908 | MS.gene053138:CDS | 35.0% | |
| GTTGCCAAACAAGAAAAAGA+AGG | - | chr4.2:91491033-91491052 | MS.gene053138:intron | 35.0% | |
| TAATGTTTGGAGGGAAGATT+TGG | + | chr4.2:91491528-91491547 | None:intergenic | 35.0% | |
| TAGTAATTGTTAGCTGTGAG+GGG | - | chr4.2:91489955-91489974 | MS.gene053138:intron | 35.0% | |
| TATAGAACAAGTTTCCCTGA+GGG | + | chr4.2:91490342-91490361 | None:intergenic | 35.0% | |
| TCACAACTATTATCCACATG+TGG | + | chr4.2:91488169-91488188 | None:intergenic | 35.0% | |
| TCCATCACTTATCAAGTCAA+TGG | - | chr4.2:91489144-91489163 | MS.gene053138:intron | 35.0% | |
| TGAGTTTCTTCTTGAGTTCA+AGG | - | chr4.2:91489784-91489803 | MS.gene053138:intron | 35.0% | |
| TTATAGAACAAGTTTCCCTG+AGG | + | chr4.2:91490343-91490362 | None:intergenic | 35.0% | |
| TTCCTGATGTTGGAAAAGAA+TGG | + | chr4.2:91488825-91488844 | None:intergenic | 35.0% | |
| TTTACCTTGGATTTCTTTGC+TGG | + | chr4.2:91488371-91488390 | None:intergenic | 35.0% | |
| ! | AATATCCCCTTTTGTTCTCA+AGG | - | chr4.2:91488298-91488317 | MS.gene053138:intron | 35.0% |
| ! | ACTTTCGAAGATAGCTTTTG+TGG | - | chr4.2:91489999-91490018 | MS.gene053138:intron | 35.0% |
| ! | CCTTTTGTTCTCAAGGATTT+AGG | - | chr4.2:91488305-91488324 | MS.gene053138:intron | 35.0% |
| ! | CTCACGTTTATAGAGGTTTT+TGG | - | chr4.2:91489173-91489192 | MS.gene053138:intron | 35.0% |
| ! | CTTTCGAAGATAGCTTTTGT+GGG | - | chr4.2:91490000-91490019 | MS.gene053138:intron | 35.0% |
| ! | GTTTTCTTTGTAGCTTCCTT+TGG | + | chr4.2:91490827-91490846 | None:intergenic | 35.0% |
| ! | TGCGATTTCAGTCAATGTTT+TGG | + | chr4.2:91488345-91488364 | None:intergenic | 35.0% |
| ! | TGTCCCCTAAAATACTTTTG+GGG | - | chr4.2:91491385-91491404 | MS.gene053138:intron | 35.0% |
| ! | TTGATGACAGTGCTAGAAAA+GGG | + | chr4.2:91493361-91493380 | None:intergenic | 35.0% |
| !! | AATACTTTTGGGGACGTTTT+TGG | - | chr4.2:91491253-91491272 | MS.gene053138:intron | 35.0% |
| !! | ACCATTGACTTGATAAGTGA+TGG | + | chr4.2:91489148-91489167 | None:intergenic | 35.0% |
| !! | ACTTTTGGGGACGTTTTTAA+AGG | - | chr4.2:91491327-91491346 | MS.gene053138:intron | 35.0% |
| !! | CTTTTGGGGACGTTTTTAAA+GGG | - | chr4.2:91491328-91491347 | MS.gene053138:intron | 35.0% |
| !! | GGGTCACAACATTATTTTTC+TGG | - | chr4.2:91491348-91491367 | MS.gene053138:intron | 35.0% |
| !! | TTATTTTGTAGGGTCTTCCA+AGG | - | chr4.2:91489308-91489327 | MS.gene053138:intron | 35.0% |
| !! | TTTTAGAGGACGTTTATCAG+GGG | + | chr4.2:91491235-91491254 | None:intergenic | 35.0% |
| !!! | ATTTAGCTCTAGAGTTTTGC+AGG | - | chr4.2:91488737-91488756 | MS.gene053138:intron | 35.0% |
| !!! | CGTCCTCTAAAATACTTTTG+GGG | - | chr4.2:91491243-91491262 | MS.gene053138:intron | 35.0% |
| !!! | CGTTTATAGAGGTTTTTGGT+TGG | - | chr4.2:91489177-91489196 | MS.gene053138:intron | 35.0% |
| !!! | CTTTTTCAAGGTGAATGAGT+GGG | + | chr4.2:91491828-91491847 | None:intergenic | 35.0% |
| !!! | GATTTGACAGTTTTGGACTT+TGG | + | chr4.2:91490887-91490906 | None:intergenic | 35.0% |
| !!! | TATAGAGGTTTTTGGTTGGT+AGG | - | chr4.2:91489181-91489200 | MS.gene053138:intron | 35.0% |
| !!! | TGTCCCCAAAAGTATTTTAG+GGG | + | chr4.2:91491391-91491410 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGGTGAATGAGTG+GGG | + | chr4.2:91491827-91491846 | None:intergenic | 35.0% |
| AAAGACTACGTTAGTGGTGA+GGG | + | chr4.2:91488234-91488253 | None:intergenic | 40.0% | |
| AACCAAAAAACAAGTGGGTC+TGG | + | chr4.2:91490509-91490528 | None:intergenic | 40.0% | |
| AAGTCCAGCAAAGAAATCCA+AGG | - | chr4.2:91488364-91488383 | MS.gene053138:intron | 40.0% | |
| AGACACAAAGACTACGTTAG+TGG | + | chr4.2:91488240-91488259 | None:intergenic | 40.0% | |
| AGGTCAAGTTCATCATCATG+GGG | - | chr4.2:91488917-91488936 | MS.gene053138:intron | 40.0% | |
| ATAGAACAAGTTTCCCTGAG+GGG | + | chr4.2:91490341-91490360 | None:intergenic | 40.0% | |
| ATATCATCATTCGATCCACC+TGG | + | chr4.2:91490617-91490636 | None:intergenic | 40.0% | |
| ATCAGTCGATAGTGATAGAC+AGG | - | chr4.2:91489590-91489609 | MS.gene053138:intron | 40.0% | |
| ATTATTATATGCAGGGGCTG+GGG | - | chr4.2:91491786-91491805 | MS.gene053138:intron | 40.0% | |
| CAAGGTCAAGTTCATCATCA+TGG | - | chr4.2:91488915-91488934 | MS.gene053138:intron | 40.0% | |
| CAGAATGCGTGTTTGTCATT+AGG | + | chr4.2:91493056-91493075 | None:intergenic | 40.0% | |
| CATTATTATATGCAGGGGCT+GGG | - | chr4.2:91491785-91491804 | MS.gene053138:intron | 40.0% | |
| CCACTCATTCACCTTGAAAA+AGG | - | chr4.2:91491826-91491845 | MS.gene053138:intron | 40.0% | |
| GAAAAACAAGCTTACCATGG+CGG | + | chr4.2:91493256-91493275 | None:intergenic | 40.0% | |
| GCTCCATTCGAAAAACCAAT+TGG | + | chr4.2:91492408-91492427 | None:intergenic | 40.0% | |
| GGTTGAAGCAGCAAGATTTA+AGG | - | chr4.2:91489504-91489523 | MS.gene053138:intron | 40.0% | |
| GTGTTGCCAGAGACAATAAA+TGG | + | chr4.2:91491130-91491149 | None:intergenic | 40.0% | |
| GTTTGGTCTCACGTTTATAG+AGG | - | chr4.2:91489166-91489185 | MS.gene053138:intron | 40.0% | |
| ! | AATTGGTGACTCACGTAATG+CGG | - | chr4.2:91491078-91491097 | MS.gene053138:intron | 40.0% |
| ! | ATTTTCCAAATTGCCCCTCA+GGG | - | chr4.2:91490325-91490344 | MS.gene053138:intron | 40.0% |
| ! | CACCATTCTTTTCCAACATC+AGG | - | chr4.2:91488820-91488839 | MS.gene053138:intron | 40.0% |
| ! | GGGAAAAACAATAGTGGGAA+AGG | + | chr4.2:91493341-91493360 | None:intergenic | 40.0% |
| ! | GTCTATCACTATCGACTGAT+CGG | + | chr4.2:91489590-91489609 | None:intergenic | 40.0% |
| ! | GTTTTTCCGGTAACTATGAG+TGG | - | chr4.2:91493269-91493288 | MS.gene053138:intron | 40.0% |
| ! | TAAGCGCAGTTTTCTTGCTA+AGG | + | chr4.2:91489417-91489436 | None:intergenic | 40.0% |
| ! | TATCAGCTTGGTGAGAATGT+TGG | - | chr4.2:91489624-91489643 | MS.gene053138:intron | 40.0% |
| ! | TATTTTCCAAATTGCCCCTC+AGG | - | chr4.2:91490324-91490343 | MS.gene053138:intron | 40.0% |
| ! | TCAAGAAAGAAAGCGTGCTT+TGG | - | chr4.2:91489081-91489100 | MS.gene053138:intron | 40.0% |
| ! | TCTATCACTATCGACTGATC+GGG | + | chr4.2:91489589-91489608 | None:intergenic | 40.0% |
| ! | TTGGACTTTGGCTCAAGTTT+AGG | + | chr4.2:91490875-91490894 | None:intergenic | 40.0% |
| ! | TTGGTGAGAATGTTGGTTGA+TGG | - | chr4.2:91489631-91489650 | MS.gene053138:intron | 40.0% |
| !! | CCATGGTAAGCTTGTTTTTC+CGG | - | chr4.2:91493256-91493275 | MS.gene053138:intron | 40.0% |
| !! | CTAATGTTGTTCTGGAACCT+AGG | - | chr4.2:91488499-91488518 | MS.gene053138:CDS | 40.0% |
| !! | GCAATGTTCTCTAAAACTGC+AGG | - | chr4.2:91490483-91490502 | MS.gene053138:intron | 40.0% |
| !! | GTTGATGACAGTGCTAGAAA+AGG | + | chr4.2:91493362-91493381 | None:intergenic | 40.0% |
| !!! | CCTTTTTCAAGGTGAATGAG+TGG | + | chr4.2:91491829-91491848 | None:intergenic | 40.0% |
| !!! | CGTCCCCAAAAGTATTTTAG+AGG | + | chr4.2:91491249-91491268 | None:intergenic | 40.0% |
| !!! | CTAGCTTTTGAGGTTGAGTT+AGG | - | chr4.2:91489918-91489937 | MS.gene053138:intron | 40.0% |
| !!! | GTCTCTGGCAACACTTTTTT+TGG | - | chr4.2:91491136-91491155 | MS.gene053138:intron | 40.0% |
| AAGAAAACTGCGCTTAGTGG+TGG | - | chr4.2:91489421-91489440 | MS.gene053138:intron | 45.0% | |
| ACCTGCACGAATGAATTGTC+AGG | + | chr4.2:91490683-91490702 | None:intergenic | 45.0% | |
| ACCTTCGTCTTGAGTGTGAA+AGG | - | chr4.2:91490119-91490138 | MS.gene053138:intron | 45.0% | |
| AGAAGAAAGCGATGCTTTGG+TGG | - | chr4.2:91490748-91490767 | MS.gene053138:CDS | 45.0% | |
| AGCAAGAAAACTGCGCTTAG+TGG | - | chr4.2:91489418-91489437 | MS.gene053138:intron | 45.0% | |
| AGTTCCTTCGTATCGTGAAG+AGG | - | chr4.2:91488545-91488564 | MS.gene053138:CDS | 45.0% | |
| ATACGAAGGAACTGGGTTTC+TGG | + | chr4.2:91488538-91488557 | None:intergenic | 45.0% | |
| CAAACTTTCTGACGTCGATC+CGG | - | chr4.2:91492312-91492331 | MS.gene053138:CDS | 45.0% | |
| CAAAGACTACGTTAGTGGTG+AGG | + | chr4.2:91488235-91488254 | None:intergenic | 45.0% | |
| CAAGTTCATCATCATGGGGA+AGG | - | chr4.2:91488921-91488940 | MS.gene053138:intron | 45.0% | |
| CCGGAAAAACAAGCTTACCA+TGG | + | chr4.2:91493259-91493278 | None:intergenic | 45.0% | |
| CGTCGAGGGGATAAAGAAAA+TGG | + | chr4.2:91493166-91493185 | None:intergenic | 45.0% | |
| CTTACCTCTTCACGATACGA+AGG | + | chr4.2:91488552-91488571 | None:intergenic | 45.0% | |
| CTTCACGATACGAAGGAACT+GGG | + | chr4.2:91488545-91488564 | None:intergenic | 45.0% | |
| GATCGACGTCAGAAAGTTTG+GGG | + | chr4.2:91492312-91492331 | None:intergenic | 45.0% | |
| GCATTATTATATGCAGGGGC+TGG | - | chr4.2:91491784-91491803 | MS.gene053138:intron | 45.0% | |
| GGATCGACGTCAGAAAGTTT+GGG | + | chr4.2:91492313-91492332 | None:intergenic | 45.0% | |
| GGTCATATCTCTAGCTGATG+TGG | + | chr4.2:91489848-91489867 | None:intergenic | 45.0% | |
| GTCATCAACAACCATTACGC+CGG | - | chr4.2:91493373-91493392 | MS.gene053138:intron | 45.0% | |
| GTCATGTGCTCTCTTCTTCA+GGG | - | chr4.2:91493411-91493430 | MS.gene053138:intron | 45.0% | |
| GTGACTCTGACTCAAGAAAG+AGG | - | chr4.2:91488629-91488648 | MS.gene053138:intron | 45.0% | |
| GTGTACAGAAGGAGAGAGAA+GGG | + | chr4.2:91492242-91492261 | None:intergenic | 45.0% | |
| TACTGCAGTTGAGCCAAAAG+AGG | - | chr4.2:91490970-91490989 | MS.gene053138:intron | 45.0% | |
| TATCACTGTCAACCGAGCTA+TGG | + | chr4.2:91491763-91491782 | None:intergenic | 45.0% | |
| TCAACCTCAAAAGCTAGCAG+AGG | + | chr4.2:91489915-91489934 | None:intergenic | 45.0% | |
| TCACACTCAAGACGAAGGTT+GGG | + | chr4.2:91490118-91490137 | None:intergenic | 45.0% | |
| TCCTGACAATTCATTCGTGC+AGG | - | chr4.2:91490679-91490698 | MS.gene053138:CDS | 45.0% | |
| TCGTATCGTGAAGAGGTAAG+CGG | - | chr4.2:91488552-91488571 | MS.gene053138:CDS | 45.0% | |
| TCTTCACGATACGAAGGAAC+TGG | + | chr4.2:91488546-91488565 | None:intergenic | 45.0% | |
| TGTGTACAGAAGGAGAGAGA+AGG | + | chr4.2:91492243-91492262 | None:intergenic | 45.0% | |
| TGTTCCTCGCAAAATCTCCT+TGG | + | chr4.2:91489328-91489347 | None:intergenic | 45.0% | |
| TTCACACTCAAGACGAAGGT+TGG | + | chr4.2:91490119-91490138 | None:intergenic | 45.0% | |
| TTCCTAGCATAAACCACCAC+CGG | - | chr4.2:91493083-91493102 | MS.gene053138:intron | 45.0% | |
| TTGTCCCCTAAAAGTGGCTA+AGG | - | chr4.2:91491172-91491191 | MS.gene053138:intron | 45.0% | |
| ! | CTGAAGAAGAGAGCACATGA+CGG | + | chr4.2:91493412-91493431 | None:intergenic | 45.0% |
| ! | CTTTTTCCGATCTGTGAGCA+TGG | + | chr4.2:91493138-91493157 | None:intergenic | 45.0% |
| ! | TCTTCCAAGGAGATTTTGCG+AGG | - | chr4.2:91489321-91489340 | MS.gene053138:intron | 45.0% |
| !! | GGTGGTTTGTTGAAGGAAGA+AGG | + | chr4.2:91492284-91492303 | None:intergenic | 45.0% |
| !!! | CGTTGCCTTAGCCACTTTTA+GGG | + | chr4.2:91491180-91491199 | None:intergenic | 45.0% |
| !!! | GTTGCCTTAGCCACTTTTAG+GGG | + | chr4.2:91491179-91491198 | None:intergenic | 45.0% |
| !!! | TCTTCGTGTGAGCTAGCTTT+TGG | - | chr4.2:91490209-91490228 | MS.gene053138:intron | 45.0% |
| !! | AAAAATTTAAGTAATTAAAA+AGG | - | chr4.2:91492451-91492470 | MS.gene053138:intron | 5.0% |
| !! | ACTATTATTTATATTATATA+AGG | + | chr4.2:91492634-91492653 | None:intergenic | 5.0% |
| AAACAAGCTTACCATGGCGG+TGG | + | chr4.2:91493253-91493272 | None:intergenic | 50.0% | |
| AACGCTTGCGTGTGTACAGA+AGG | + | chr4.2:91492253-91492272 | None:intergenic | 50.0% | |
| AAGCTAGCAGAGGAGACAAG+AGG | + | chr4.2:91489905-91489924 | None:intergenic | 50.0% | |
| ACATGTGGCTGCAACCTCAA+AGG | + | chr4.2:91488154-91488173 | None:intergenic | 50.0% | |
| ACCATGGCGGTGGAAGAAAA+AGG | + | chr4.2:91493243-91493262 | None:intergenic | 50.0% | |
| ACTTATCACGCCACCTGCAA+AGG | - | chr4.2:91490091-91490110 | MS.gene053138:intron | 50.0% | |
| AGCAGAGGAGACAAGAGGTA+AGG | + | chr4.2:91489900-91489919 | None:intergenic | 50.0% | |
| AGCGATGCTTTGGTGGAAGA+AGG | - | chr4.2:91490755-91490774 | MS.gene053138:CDS | 50.0% | |
| AGTTTCCCTGAGGGGCAATT+TGG | + | chr4.2:91490333-91490352 | None:intergenic | 50.0% | |
| ATCTGTGAGCATGGTGGTTG+GGG | + | chr4.2:91493129-91493148 | None:intergenic | 50.0% | |
| ATTGCCCCATGACCATAGCT+CGG | - | chr4.2:91491748-91491767 | MS.gene053138:intron | 50.0% | |
| ATTGGAAAGCTCTCGTCGAG+GGG | + | chr4.2:91493179-91493198 | None:intergenic | 50.0% | |
| CAACCACCATGCTCACAGAT+CGG | - | chr4.2:91493129-91493148 | MS.gene053138:CDS | 50.0% | |
| CACACTCAAGACGAAGGTTG+GGG | + | chr4.2:91490117-91490136 | None:intergenic | 50.0% | |
| CATTGGAAAGCTCTCGTCGA+GGG | + | chr4.2:91493180-91493199 | None:intergenic | 50.0% | |
| CCATGGCGGTGGAAGAAAAA+GGG | + | chr4.2:91493242-91493261 | None:intergenic | 50.0% | |
| CCTCGAAACTGTGAAACCAG+AGG | - | chr4.2:91491000-91491019 | MS.gene053138:intron | 50.0% | |
| CGGATCGACGTCAGAAAGTT+TGG | + | chr4.2:91492314-91492333 | None:intergenic | 50.0% | |
| CGTCATGTGCTCTCTTCTTC+AGG | - | chr4.2:91493410-91493429 | MS.gene053138:intron | 50.0% | |
| GACGTCAGAAAGTTTGGGGA+TGG | + | chr4.2:91492308-91492327 | None:intergenic | 50.0% | |
| GATCTGTGAGCATGGTGGTT+GGG | + | chr4.2:91493130-91493149 | None:intergenic | 50.0% | |
| GCCTTTCACACTCAAGACGA+AGG | + | chr4.2:91490123-91490142 | None:intergenic | 50.0% | |
| GTCAACCGAGCTATGGTCAT+GGG | + | chr4.2:91491756-91491775 | None:intergenic | 50.0% | |
| GTCAGAAAGTTTGGGGATGG+TGG | + | chr4.2:91492305-91492324 | None:intergenic | 50.0% | |
| GTTCATCATCATGGGGAAGG+TGG | - | chr4.2:91488924-91488943 | MS.gene053138:intron | 50.0% | |
| TCAACCGAGCTATGGTCATG+GGG | + | chr4.2:91491755-91491774 | None:intergenic | 50.0% | |
| TCAGTTACGCTTACGTTGCG+AGG | - | chr4.2:91489029-91489048 | MS.gene053138:intron | 50.0% | |
| TGTCAACCGAGCTATGGTCA+TGG | + | chr4.2:91491757-91491776 | None:intergenic | 50.0% | |
| TTTCCGATCTGTGAGCATGG+TGG | + | chr4.2:91493135-91493154 | None:intergenic | 50.0% | |
| TTTGCAGGTGGCGTGATAAG+TGG | + | chr4.2:91490092-91490111 | None:intergenic | 50.0% | |
| ! | AGAAAGTTTGGGGATGGTGG+TGG | + | chr4.2:91492302-91492321 | None:intergenic | 50.0% |
| ! | CCTCTGGTTTCACAGTTTCG+AGG | + | chr4.2:91491003-91491022 | None:intergenic | 50.0% |
| ! | GTGGCTAAGGCAACGCTTTT+TGG | - | chr4.2:91491185-91491204 | MS.gene053138:intron | 50.0% |
| ! | TCGAGGTGTGCATCCTCTTT+TGG | + | chr4.2:91490986-91491005 | None:intergenic | 50.0% |
| ! | TTTGAGGTTGCAGCCACATG+TGG | - | chr4.2:91488153-91488172 | MS.gene053138:intron | 50.0% |
| !! | GGATGGTGGTGGTTTGTTGA+AGG | + | chr4.2:91492291-91492310 | None:intergenic | 50.0% |
| !!! | GCGTTGCCTTAGCCACTTTT+AGG | + | chr4.2:91491181-91491200 | None:intergenic | 50.0% |
| !!! | GGCCAGACCCACTTGTTTTT+TGG | - | chr4.2:91490504-91490523 | MS.gene053138:intron | 50.0% |
| !!! | GTCTCCTCTGCTAGCTTTTG+AGG | - | chr4.2:91489908-91489927 | MS.gene053138:intron | 50.0% |
| AAACTGCGCTTAGTGGTGGC+TGG | - | chr4.2:91489425-91489444 | MS.gene053138:intron | 55.0% | |
| AAGCCACTGTTCCGGCGTAA+TGG | + | chr4.2:91493387-91493406 | None:intergenic | 55.0% | |
| ACCTCTTCCGCAACTGTGGA+AGG | + | chr4.2:91488895-91488914 | None:intergenic | 55.0% | |
| ACCTTCCACAGTTGCGGAAG+AGG | - | chr4.2:91488891-91488910 | MS.gene053138:intron | 55.0% | |
| ACGTTAGTGGTGAGGGACAC+AGG | + | chr4.2:91488227-91488246 | None:intergenic | 55.0% | |
| CAACCATTACGCCGGAACAG+TGG | - | chr4.2:91493381-91493400 | MS.gene053138:intron | 55.0% | |
| CACAGTTGCGGAAGAGGTCA+AGG | - | chr4.2:91488897-91488916 | MS.gene053138:intron | 55.0% | |
| CCATTGGAAAGCTCTCGTCG+AGG | + | chr4.2:91493181-91493200 | None:intergenic | 55.0% | |
| CCTCGACGAGAGCTTTCCAA+TGG | - | chr4.2:91493178-91493197 | MS.gene053138:CDS | 55.0% | |
| CGATCCGGTTGTCGTGTTCA+CGG | - | chr4.2:91492327-91492346 | MS.gene053138:CDS | 55.0% | |
| CGATCCGTGAACACGACAAC+CGG | + | chr4.2:91492334-91492353 | None:intergenic | 55.0% | |
| CGATCTGTGAGCATGGTGGT+TGG | + | chr4.2:91493131-91493150 | None:intergenic | 55.0% | |
| CGGTTGTCGTGTTCACGGAT+CGG | - | chr4.2:91492332-91492351 | MS.gene053138:CDS | 55.0% | |
| CTTGACCTCTTCCGCAACTG+TGG | + | chr4.2:91488899-91488918 | None:intergenic | 55.0% | |
| GCACAGACCTTCCACAGTTG+CGG | - | chr4.2:91488885-91488904 | MS.gene053138:intron | 55.0% | |
| GGCAACTTTGTAGCTGCCTC+TGG | + | chr4.2:91491019-91491038 | None:intergenic | 55.0% | |
| ! | CCCTTTTTCTTCCACCGCCA+TGG | - | chr4.2:91493239-91493258 | MS.gene053138:intron | 55.0% |
| ! | GTGAATGAGTGGGGTGTCCT+GGG | + | chr4.2:91491818-91491837 | None:intergenic | 55.0% |
| AAGGTTGGGGCCTTTGCAGG+TGG | + | chr4.2:91490104-91490123 | None:intergenic | 60.0% | |
| ACGAAGGTTGGGGCCTTTGC+AGG | + | chr4.2:91490107-91490126 | None:intergenic | 60.0% | |
| GCAGGTGGCGTGATAAGTGG+TGG | + | chr4.2:91490089-91490108 | None:intergenic | 60.0% | |
| TGACGGCGAAGCCACTGTTC+CGG | + | chr4.2:91493395-91493414 | None:intergenic | 60.0% | |
| ! | GCGTGCTTTGGATGCTGCAG+AGG | - | chr4.2:91489093-91489112 | MS.gene053138:intron | 60.0% |
| ! | GGCCGGTGGTGGTTTATGCT+AGG | + | chr4.2:91493088-91493107 | None:intergenic | 60.0% |
| ! | GGTGAATGAGTGGGGTGTCC+TGG | + | chr4.2:91491819-91491838 | None:intergenic | 60.0% |
| ACCACCGGCCACCATCTTCC+CGG | - | chr4.2:91493098-91493117 | MS.gene053138:intron | 65.0% | |
| AGGGGCTGGGGTTCAAACCC+AGG | - | chr4.2:91491798-91491817 | MS.gene053138:intron | 65.0% | |
| !! | CTGGCACGAGAAGAGCGCCT+AGG | + | chr4.2:91488519-91488538 | None:intergenic | 65.0% |
| ATGGTGGTTGGGGCGACGCC+GGG | + | chr4.2:91493119-91493138 | None:intergenic | 70.0% | |
| CATGGTGGTTGGGGCGACGC+CGG | + | chr4.2:91493120-91493139 | None:intergenic | 70.0% | |
| TTGGGGCGACGCCGGGAAGA+TGG | + | chr4.2:91493112-91493131 | None:intergenic | 70.0% | |
| ! | GACGCCGGGAAGATGGTGGC+CGG | + | chr4.2:91493105-91493124 | None:intergenic | 70.0% |
| ! | GGGAAGATGGTGGCCGGTGG+TGG | + | chr4.2:91493099-91493118 | None:intergenic | 70.0% |
| GGGCGACGCCGGGAAGATGG+TGG | + | chr4.2:91493109-91493128 | None:intergenic | 75.0% | |
| ! | GCCGGGAAGATGGTGGCCGG+TGG | + | chr4.2:91493102-91493121 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 91488085 | 91493586 | 91488085 | ID=MS.gene053138 |
| chr4.2 | mRNA | 91488085 | 91493586 | 91488085 | ID=MS.gene053138.t1;Parent=MS.gene053138 |
| chr4.2 | exon | 91493476 | 91493586 | 91493476 | ID=MS.gene053138.t1.exon1;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91493476 | 91493586 | 91493476 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91493286 | 91493351 | 91493286 | ID=MS.gene053138.t1.exon2;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91493286 | 91493351 | 91493286 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91493105 | 91493200 | 91493105 | ID=MS.gene053138.t1.exon3;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91493105 | 91493200 | 91493105 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91492729 | 91492790 | 91492729 | ID=MS.gene053138.t1.exon4;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91492729 | 91492790 | 91492729 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91492473 | 91492638 | 91492473 | ID=MS.gene053138.t1.exon5;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91492473 | 91492638 | 91492473 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91492146 | 91492352 | 91492146 | ID=MS.gene053138.t1.exon6;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91492146 | 91492352 | 91492146 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91490602 | 91490970 | 91490602 | ID=MS.gene053138.t1.exon7;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91490602 | 91490970 | 91490602 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91488394 | 91488581 | 91488394 | ID=MS.gene053138.t1.exon8;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91488394 | 91488581 | 91488394 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91488239 | 91488302 | 91488239 | ID=MS.gene053138.t1.exon9;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91488239 | 91488302 | 91488239 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| chr4.2 | exon | 91488085 | 91488090 | 91488085 | ID=MS.gene053138.t1.exon10;Parent=MS.gene053138.t1 |
| chr4.2 | CDS | 91488085 | 91488090 | 91488085 | ID=cds.MS.gene053138.t1;Parent=MS.gene053138.t1 |
| Gene Sequence |
| Protein sequence |
