Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053198.t1 | XP_014518279.1 | 50.1 | 757 | 321 | 4 | 39 | 738 | 27 | 783 | 3.20E-209 | 738.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053198.t1 | Q9SZL8 | 33.7 | 597 | 335 | 9 | 48 | 591 | 73 | 661 | 2.3e-94 | 348.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053198.t1 | A0A1S3VJK5 | 50.1 | 757 | 321 | 4 | 39 | 738 | 27 | 783 | 2.3e-209 | 738.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene053198.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053198.t1 | MTR_6g051425 | 40.288 | 139 | 83 | 0 | 133 | 271 | 151 | 289 | 3.24e-29 | 119 |
MS.gene053198.t1 | MTR_6g022070 | 28.966 | 145 | 99 | 1 | 298 | 442 | 1 | 141 | 5.87e-17 | 83.2 |
MS.gene053198.t1 | MTR_4g035820 | 27.839 | 273 | 137 | 10 | 31 | 248 | 57 | 324 | 1.47e-15 | 81.3 |
MS.gene053198.t1 | MTR_0558s0020 | 23.183 | 289 | 148 | 7 | 30 | 244 | 8 | 296 | 1.79e-15 | 78.2 |
MS.gene053198.t1 | MTR_0856s0010 | 47.436 | 78 | 41 | 0 | 46 | 123 | 32 | 109 | 4.05e-15 | 73.9 |
MS.gene053198.t1 | MTR_7g446510 | 30.061 | 163 | 112 | 2 | 91 | 252 | 168 | 329 | 1.22e-14 | 76.3 |
MS.gene053198.t1 | MTR_8g446020 | 33.333 | 117 | 78 | 0 | 128 | 244 | 140 | 256 | 3.30e-14 | 73.6 |
MS.gene053198.t1 | MTR_3g012160 | 41.975 | 81 | 46 | 1 | 153 | 233 | 14 | 93 | 9.36e-14 | 67.8 |
MS.gene053198.t1 | MTR_7g446480 | 30.061 | 163 | 112 | 2 | 91 | 252 | 153 | 314 | 5.31e-13 | 71.2 |
MS.gene053198.t1 | MTR_5g023310 | 28.025 | 157 | 44 | 3 | 139 | 294 | 16 | 104 | 1.68e-12 | 64.7 |
MS.gene053198.t1 | MTR_1g070355 | 24.464 | 233 | 125 | 5 | 54 | 238 | 80 | 309 | 2.07e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053198.t1 | AT4G15090 | 30.328 | 732 | 433 | 15 | 48 | 731 | 51 | 753 | 7.14e-108 | 348 |
MS.gene053198.t1 | AT4G15090 | 30.328 | 732 | 433 | 15 | 48 | 731 | 51 | 753 | 7.14e-108 | 348 |
MS.gene053198.t1 | AT4G15090 | 30.328 | 732 | 433 | 15 | 48 | 731 | 51 | 753 | 7.14e-108 | 348 |
MS.gene053198.t1 | AT4G15090 | 30.328 | 732 | 433 | 15 | 48 | 731 | 51 | 753 | 7.14e-108 | 348 |
MS.gene053198.t1 | AT4G15090 | 30.328 | 732 | 433 | 15 | 48 | 731 | 51 | 753 | 7.14e-108 | 348 |
MS.gene053198.t1 | AT4G38180 | 30.972 | 720 | 407 | 16 | 8 | 654 | 38 | 740 | 5.81e-106 | 342 |
MS.gene053198.t1 | AT3G22170 | 31.987 | 594 | 354 | 8 | 48 | 603 | 70 | 651 | 2.21e-101 | 331 |
MS.gene053198.t1 | AT3G22170 | 31.987 | 594 | 354 | 8 | 48 | 603 | 70 | 651 | 2.21e-101 | 331 |
MS.gene053198.t1 | AT1G52520 | 32.236 | 577 | 346 | 10 | 33 | 567 | 66 | 639 | 3.97e-98 | 319 |
MS.gene053198.t1 | AT1G76320 | 30.241 | 582 | 352 | 8 | 52 | 593 | 1 | 568 | 7.53e-91 | 298 |
MS.gene053198.t1 | AT2G27110 | 32.155 | 594 | 342 | 12 | 48 | 605 | 49 | 617 | 1.55e-90 | 302 |
MS.gene053198.t1 | AT2G27110 | 32.155 | 594 | 342 | 12 | 48 | 605 | 49 | 617 | 1.55e-90 | 302 |
MS.gene053198.t1 | AT1G76320 | 30.241 | 582 | 352 | 8 | 52 | 593 | 1 | 568 | 2.17e-90 | 299 |
MS.gene053198.t1 | AT1G76320 | 30.241 | 582 | 352 | 8 | 52 | 593 | 1 | 568 | 2.17e-90 | 299 |
MS.gene053198.t1 | AT1G76320 | 30.241 | 582 | 352 | 8 | 52 | 593 | 1 | 568 | 2.50e-90 | 299 |
MS.gene053198.t1 | AT3G06250 | 33.650 | 526 | 331 | 11 | 48 | 566 | 190 | 704 | 5.62e-88 | 293 |
MS.gene053198.t1 | AT3G06250 | 33.650 | 526 | 331 | 11 | 48 | 566 | 190 | 704 | 5.62e-88 | 293 |
MS.gene053198.t1 | AT3G06250 | 33.650 | 526 | 331 | 11 | 48 | 566 | 190 | 704 | 5.62e-88 | 293 |
MS.gene053198.t1 | AT2G27110 | 34.728 | 478 | 289 | 8 | 132 | 605 | 14 | 472 | 1.78e-87 | 290 |
MS.gene053198.t1 | AT1G80010 | 31.281 | 601 | 327 | 13 | 39 | 570 | 82 | 665 | 2.11e-84 | 283 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 4.52e-83 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 8.72e-83 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 8.72e-83 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 8.72e-83 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 1.00e-82 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.325 | 581 | 370 | 11 | 51 | 618 | 41 | 605 | 1.00e-82 | 280 |
MS.gene053198.t1 | AT2G32250 | 31.207 | 580 | 370 | 11 | 52 | 618 | 1 | 564 | 2.77e-82 | 278 |
MS.gene053198.t1 | AT2G32250 | 31.207 | 580 | 370 | 11 | 52 | 618 | 1 | 564 | 3.61e-82 | 278 |
MS.gene053198.t1 | AT5G18960 | 32.224 | 571 | 354 | 15 | 28 | 582 | 192 | 745 | 8.15e-82 | 277 |
MS.gene053198.t1 | AT5G18960 | 32.224 | 571 | 354 | 15 | 28 | 582 | 192 | 745 | 8.15e-82 | 277 |
MS.gene053198.t1 | AT4G38170 | 33.763 | 388 | 246 | 4 | 181 | 566 | 21 | 399 | 2.66e-75 | 253 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 24 | 583 | 8.22e-72 | 249 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 24 | 583 | 9.06e-72 | 249 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 24 | 583 | 9.06e-72 | 249 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 24 | 583 | 1.60e-71 | 249 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 24 | 583 | 1.60e-71 | 249 |
MS.gene053198.t1 | AT4G19990 | 30.261 | 575 | 353 | 12 | 51 | 592 | 38 | 597 | 1.79e-71 | 248 |
MS.gene053198.t1 | AT4G19990 | 33.017 | 421 | 274 | 4 | 174 | 592 | 112 | 526 | 3.58e-70 | 243 |
MS.gene053198.t1 | AT1G10240 | 25.473 | 581 | 356 | 13 | 42 | 563 | 42 | 604 | 1.65e-54 | 199 |
MS.gene053198.t1 | AT1G10240 | 25.473 | 581 | 356 | 13 | 42 | 563 | 42 | 604 | 1.65e-54 | 199 |
MS.gene053198.t1 | AT5G28530 | 26.162 | 581 | 351 | 11 | 46 | 563 | 53 | 618 | 9.62e-51 | 189 |
MS.gene053198.t1 | AT5G28530 | 25.990 | 581 | 348 | 11 | 46 | 563 | 53 | 614 | 1.44e-50 | 188 |
MS.gene053198.t1 | AT5G28530 | 25.990 | 581 | 348 | 11 | 46 | 563 | 53 | 614 | 1.44e-50 | 188 |
MS.gene053198.t1 | AT5G28530 | 23.290 | 541 | 354 | 14 | 46 | 563 | 53 | 555 | 6.24e-29 | 123 |
MS.gene053198.t1 | AT5G28530 | 23.105 | 541 | 351 | 14 | 46 | 563 | 53 | 551 | 8.96e-29 | 122 |
Find 149 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGTTGACGTTTCGGATTC+CGG | 0.201943 | 4.2:-92418935 | MS.gene053198:CDS |
TCTTTCCCGCTCTTCGAAAA+TGG | 0.249066 | 4.2:+92415422 | None:intergenic |
GATCGCAAACCCTTGTTTCA+TGG | 0.299904 | 4.2:+92418808 | None:intergenic |
AAGACCGCAACCTAGTAAAA+TGG | 0.321194 | 4.2:+92415776 | None:intergenic |
TGCTGCTCGTGTTGACGTTT+CGG | 0.340675 | 4.2:-92418942 | MS.gene053198:CDS |
GTGTTGACGTTTCGGATTCC+GGG | 0.344560 | 4.2:-92418934 | MS.gene053198:CDS |
GGCTATGCAGAATGCAATTC+AGG | 0.347065 | 4.2:-92415652 | MS.gene053198:CDS |
ATGCCATTTGCCCCGTTTGT+TGG | 0.369173 | 4.2:-92415819 | MS.gene053198:CDS |
AGTATTGTGTTGATTTCAAC+GGG | 0.389824 | 4.2:-92415008 | MS.gene053198:CDS |
CACCACCTATGCCTAGTATT+AGG | 0.393202 | 4.2:+92415621 | None:intergenic |
GTACACCCATGACAAGTATA+TGG | 0.398379 | 4.2:-92415154 | MS.gene053198:CDS |
CCGCCAGCTAGCTCTCCGTC+AGG | 0.404961 | 4.2:+92418965 | None:intergenic |
GGATTAAGAATTGGTTGATC+AGG | 0.405554 | 4.2:+92414586 | None:intergenic |
CTAGGCATAGGTGGTGTCTA+TGG | 0.405638 | 4.2:-92415614 | MS.gene053198:CDS |
ACATTACTTCCTATGTCTGA+TGG | 0.406153 | 4.2:-92414334 | MS.gene053198:CDS |
TCTCCGTCAGGGGCTAATAA+AGG | 0.411181 | 4.2:+92418977 | None:intergenic |
ACTTCCACAACCGAAACAAT+TGG | 0.413255 | 4.2:+92414466 | None:intergenic |
AAAGGATGATCGATCAATAT+AGG | 0.415391 | 4.2:+92418995 | None:intergenic |
CCTCTGTGTTGTTGACATTC+CGG | 0.424793 | 4.2:+92415365 | None:intergenic |
AAAACCAATTGTTTCGGTTG+TGG | 0.428388 | 4.2:-92414470 | MS.gene053198:CDS |
GATGATTGACACCAACAAAC+GGG | 0.432575 | 4.2:+92415808 | None:intergenic |
TTGGTGGTATGTTTGATTCA+TGG | 0.433399 | 4.2:+92418711 | None:intergenic |
ACACCAACAAACGGGGCAAA+TGG | 0.438957 | 4.2:+92415816 | None:intergenic |
ATGGTTTGGGTGAAAATGAT+TGG | 0.445440 | 4.2:-92415452 | MS.gene053198:CDS |
CATTACTTCCTATGTCTGAT+GGG | 0.447968 | 4.2:-92414333 | MS.gene053198:CDS |
TGATGATTGACACCAACAAA+CGG | 0.449717 | 4.2:+92415807 | None:intergenic |
ACACAATACTTAGTTTCGTT+CGG | 0.457073 | 4.2:+92415021 | None:intergenic |
GGCTAAGGTGTATGTCTTCG+AGG | 0.457503 | 4.2:-92415707 | MS.gene053198:CDS |
TATCCTACTTTGCTAGAATG+AGG | 0.459924 | 4.2:-92415995 | MS.gene053198:CDS |
AAAACTAGAAACTCTAAGAA+AGG | 0.460549 | 4.2:-92418785 | MS.gene053198:CDS |
ACTCCAAGACAAGGCTGAAA+AGG | 0.462412 | 4.2:-92415259 | MS.gene053198:CDS |
CAAATGGTCTAGCAAGAAGT+TGG | 0.463702 | 4.2:-92414689 | MS.gene053198:CDS |
GTCATACTTGTTTGTCAAGT+AGG | 0.465266 | 4.2:+92415842 | None:intergenic |
AGGTTGTGTTTCCTAATACT+AGG | 0.465284 | 4.2:-92415632 | MS.gene053198:CDS |
GCAAAAGAAAGACACCTTCT+CGG | 0.472868 | 4.2:-92416044 | MS.gene053198:CDS |
AACATCACCAAAGTATTCAT+AGG | 0.473828 | 4.2:+92415881 | None:intergenic |
TTTGTTGGTGTCAATCATCA+TGG | 0.475674 | 4.2:-92415804 | MS.gene053198:CDS |
GCCCCTGACGGAGAGCTAGC+TGG | 0.477996 | 4.2:-92418968 | MS.gene053198:CDS |
CCACACATAGAAAGATTTGA+AGG | 0.478166 | 4.2:-92414793 | MS.gene053198:CDS |
GCCACATTGTGGTGTGGGAG+GGG | 0.479684 | 4.2:-92414650 | MS.gene053198:CDS |
GAGCAATCAAGTTTCTTCGT+TGG | 0.480101 | 4.2:+92418674 | None:intergenic |
CACTTATGCTCGATGGCTGA+TGG | 0.482201 | 4.2:-92419022 | None:intergenic |
TCGGGAAGGAAGGAGATGGC+AGG | 0.482875 | 4.2:-92416025 | MS.gene053198:CDS |
ATTTGTTGTTTCAAAGGTCC+CGG | 0.485747 | 4.2:+92418916 | None:intergenic |
CGCCAGCTAGCTCTCCGTCA+GGG | 0.486041 | 4.2:+92418966 | None:intergenic |
TTGAAATTGTCTCTCGATTG+TGG | 0.489013 | 4.2:+92415182 | None:intergenic |
GACAGCATTTGTTGTTTCAA+AGG | 0.491833 | 4.2:+92418910 | None:intergenic |
CTTGTTTCATGGCATATTCA+CGG | 0.492232 | 4.2:+92418819 | None:intergenic |
AAAACCACTAGTTGACTGTT+GGG | 0.492621 | 4.2:+92414273 | None:intergenic |
TCCGTTAAAAGTACCACGTA+AGG | 0.492742 | 4.2:-92414566 | MS.gene053198:CDS |
GACAATACTCTCCTCTAAAA+CGG | 0.498094 | 4.2:+92415053 | None:intergenic |
CGTGAATATGCCATGAAACA+AGG | 0.498225 | 4.2:-92418818 | MS.gene053198:CDS |
TGTATGAAGAAATGATCAAA+TGG | 0.501577 | 4.2:-92414705 | MS.gene053198:CDS |
TTAAAAGACATACCGATAGT+AGG | 0.501742 | 4.2:+92418869 | None:intergenic |
TTTCGAAGAGCGGGAAAGAT+GGG | 0.502201 | 4.2:-92415418 | MS.gene053198:CDS |
GTTGGATTCGTCTTCAAAGT+TGG | 0.502236 | 4.2:+92418692 | None:intergenic |
ATACTTGTCATGGGTGTACT+CGG | 0.502362 | 4.2:+92415158 | None:intergenic |
CATCTCCTTCCTTCCCGAGA+AGG | 0.502837 | 4.2:+92416030 | None:intergenic |
TTACCTGGTTGTTCGAAACA+TGG | 0.503284 | 4.2:-92415728 | MS.gene053198:CDS |
TGGTCATCTTAGAGTGAAAG+AGG | 0.503540 | 4.2:-92414908 | MS.gene053198:CDS |
TATGTCTTCGAGGCCTCCAA+TGG | 0.508338 | 4.2:-92415697 | MS.gene053198:CDS |
TCGGTTACAATTCCCATTGG+AGG | 0.511504 | 4.2:+92415684 | None:intergenic |
TTACGAAAATCTAACATTTG+TGG | 0.512305 | 4.2:-92416090 | MS.gene053198:CDS |
AAACGATCAGGCAGGTGTAC+GGG | 0.512319 | 4.2:-92416153 | MS.gene053198:CDS |
CGTTCCATGGTATGTGATGC+CGG | 0.512631 | 4.2:-92416116 | MS.gene053198:CDS |
GAGAGATGTCAGAAACTTTG+TGG | 0.514693 | 4.2:-92416066 | MS.gene053198:CDS |
TCTGGGCTGATGCACGTAGT+AGG | 0.516810 | 4.2:-92415908 | MS.gene053198:CDS |
CAAAAGAAAGACACCTTCTC+GGG | 0.517286 | 4.2:-92416043 | MS.gene053198:CDS |
GTATCTCCATATACTTGTCA+TGG | 0.517305 | 4.2:+92415148 | None:intergenic |
CCTTCAAATCTTTCTATGTG+TGG | 0.521556 | 4.2:+92414793 | None:intergenic |
AAACTAGAAACTCTAAGAAA+GGG | 0.523644 | 4.2:-92418784 | MS.gene053198:CDS |
TTCCCTCATTCTAGCAAAGT+AGG | 0.524536 | 4.2:+92415992 | None:intergenic |
AAATGGTCTAGCAAGAAGTT+GGG | 0.529100 | 4.2:-92414688 | MS.gene053198:CDS |
GAACAAAAGTTTCCGTTCCA+TGG | 0.529264 | 4.2:-92416129 | MS.gene053198:CDS |
GGATTCGTCTTCAAAGTTGG+TGG | 0.530111 | 4.2:+92418695 | None:intergenic |
TAAACGATCAGGCAGGTGTA+CGG | 0.533293 | 4.2:-92416154 | MS.gene053198:CDS |
GACAACCGACGATTAGTTTG+AGG | 0.534467 | 4.2:+92414538 | None:intergenic |
AAGTATTGTGTTGATTTCAA+CGG | 0.536214 | 4.2:-92415009 | MS.gene053198:CDS |
TAAAACCACTAGTTGACTGT+TGG | 0.536849 | 4.2:+92414272 | None:intergenic |
ATCCTACTTTGCTAGAATGA+GGG | 0.537508 | 4.2:-92415994 | MS.gene053198:CDS |
TGATCGGTTACAATTCCCAT+TGG | 0.541217 | 4.2:+92415681 | None:intergenic |
CTGCATAGCCTTGCACTGAT+CGG | 0.542185 | 4.2:+92415665 | None:intergenic |
CTATGAGATTGACATGGACG+AGG | 0.547341 | 4.2:-92415952 | MS.gene053198:CDS |
TGATTGCTCAGCTAAGATAA+CGG | 0.550952 | 4.2:-92418660 | MS.gene053198:intron |
GATAAATTCACGCCTACTAT+CGG | 0.551302 | 4.2:-92418881 | MS.gene053198:CDS |
TGTTTGCTGTTTGAGTTCAG+AGG | 0.551367 | 4.2:-92414961 | MS.gene053198:CDS |
TATCTCCATATACTTGTCAT+GGG | 0.551454 | 4.2:+92415149 | None:intergenic |
ATTCTAACTTGTGCAAGAGA+AGG | 0.552020 | 4.2:-92418737 | MS.gene053198:CDS |
AGGTCTGCCTATGAATACTT+TGG | 0.552277 | 4.2:-92415888 | MS.gene053198:CDS |
AGACACCTTCTCGGGAAGGA+AGG | 0.553011 | 4.2:-92416035 | MS.gene053198:CDS |
CAGCCACATTGTGGTGTGGG+AGG | 0.557227 | 4.2:-92414652 | MS.gene053198:CDS |
TTACAGCCACATTGTGGTGT+GGG | 0.557892 | 4.2:-92414655 | MS.gene053198:CDS |
TGTTTCGAACAACCAGGTAA+AGG | 0.558836 | 4.2:+92415731 | None:intergenic |
AGCCACATTGTGGTGTGGGA+GGG | 0.562336 | 4.2:-92414651 | MS.gene053198:CDS |
GCCAGCTAGCTCTCCGTCAG+GGG | 0.566313 | 4.2:+92418967 | None:intergenic |
GAGATACAAGTAGAATTTCG+TGG | 0.566723 | 4.2:-92415132 | MS.gene053198:CDS |
TCTCGAAGGTGTGACTACAT+TGG | 0.567976 | 4.2:-92415094 | MS.gene053198:CDS |
GAACAACCAGGTAAAGGACT+TGG | 0.570795 | 4.2:+92415737 | None:intergenic |
ATGTCTTCGAGGCCTCCAAT+GGG | 0.571048 | 4.2:-92415696 | MS.gene053198:CDS |
TTTACAGCCACATTGTGGTG+TGG | 0.571102 | 4.2:-92414656 | MS.gene053198:CDS |
TGTTTCCTAATACTAGGCAT+AGG | 0.571109 | 4.2:-92415626 | MS.gene053198:CDS |
TTGTTGGTGTCAATCATCAT+GGG | 0.576932 | 4.2:-92415803 | MS.gene053198:CDS |
TCTGATGGGTTTCAAGCGTA+CGG | 0.579844 | 4.2:-92414319 | MS.gene053198:CDS |
AAATGCAACTATTATCTCGA+AGG | 0.585418 | 4.2:-92415108 | MS.gene053198:CDS |
TTGTGTGTATGATTCTCTGC+GGG | 0.590009 | 4.2:-92415517 | MS.gene053198:CDS |
CTAAATTTATCTTTCCACGA+TGG | 0.593357 | 4.2:-92414879 | MS.gene053198:CDS |
AACTCTAAGAAAGGGTCCGA+TGG | 0.598447 | 4.2:-92418776 | MS.gene053198:CDS |
GCTTGAAACCCATCAGACAT+AGG | 0.598911 | 4.2:+92414325 | None:intergenic |
GAAATATCTTAACATGCCAT+CGG | 0.599816 | 4.2:+92418760 | None:intergenic |
GTGAATATGCCATGAAACAA+GGG | 0.602322 | 4.2:-92418817 | MS.gene053198:CDS |
CGTGGAAAGATAAATTTAGA+CGG | 0.604417 | 4.2:+92414883 | None:intergenic |
AGATACAAGTAGAATTTCGT+GGG | 0.607840 | 4.2:-92415131 | MS.gene053198:CDS |
AGAAAGACACCTTCTCGGGA+AGG | 0.609091 | 4.2:-92416039 | MS.gene053198:CDS |
CAACAACGCACTCCAAGACA+AGG | 0.609297 | 4.2:-92415268 | MS.gene053198:CDS |
ACCACCGGCATCACATACCA+TGG | 0.613048 | 4.2:+92416112 | None:intergenic |
AAGATACCAAGTCCTTTACC+TGG | 0.614091 | 4.2:-92415743 | MS.gene053198:CDS |
TTCCTAATACTAGGCATAGG+TGG | 0.615209 | 4.2:-92415623 | MS.gene053198:CDS |
CAAGCACAATCATTCCATGC+GGG | 0.616971 | 4.2:-92415212 | MS.gene053198:CDS |
ATACTTGTTTGTCAAGTAGG+TGG | 0.617215 | 4.2:+92415845 | None:intergenic |
GGTTGTTCGAAACATGGCTA+AGG | 0.617470 | 4.2:-92415722 | MS.gene053198:CDS |
AATTGTAACCGATCAGTGCA+AGG | 0.620761 | 4.2:-92415673 | MS.gene053198:CDS |
CGGGAAGGAAGGAGATGGCA+GGG | 0.622349 | 4.2:-92416024 | MS.gene053198:CDS |
TCATCCCAACAGTCAACTAG+TGG | 0.623204 | 4.2:-92414277 | MS.gene053198:CDS |
CCGTTAAAAGTACCACGTAA+GGG | 0.624486 | 4.2:-92414565 | MS.gene053198:CDS |
CGGCATCACATACCATGGAA+CGG | 0.625469 | 4.2:+92416117 | None:intergenic |
ATTAGTTTACAGCCACATTG+TGG | 0.625843 | 4.2:-92414661 | MS.gene053198:CDS |
TAGCCATGTTTCGAACAACC+AGG | 0.627145 | 4.2:+92415725 | None:intergenic |
ATTGTGGAATTTGACCCGCA+TGG | 0.627292 | 4.2:+92415198 | None:intergenic |
CATCCTTTATTAGCCCCTGA+CGG | 0.631077 | 4.2:-92418980 | MS.gene053198:CDS |
CTTCTCGGGAAGGAAGGAGA+TGG | 0.631777 | 4.2:-92416029 | MS.gene053198:CDS |
TGCATCAATGAGCAAAGATG+TGG | 0.632890 | 4.2:-92414239 | MS.gene053198:CDS |
CCTGACGGAGAGCTAGCTGG+CGG | 0.636460 | 4.2:-92418965 | MS.gene053198:CDS |
AAAGGATACGCACAATACAA+AGG | 0.637659 | 4.2:-92415561 | MS.gene053198:CDS |
CAAGGCTGAAAAGGAATACG+AGG | 0.638254 | 4.2:-92415250 | MS.gene053198:CDS |
GGATGATCGATCAATATAGG+AGG | 0.639611 | 4.2:+92418998 | None:intergenic |
GTTTGAGGACGTCCCTTACG+TGG | 0.660113 | 4.2:+92414553 | None:intergenic |
GACGTCCTCAAACTAATCGT+CGG | 0.660306 | 4.2:-92414543 | MS.gene053198:CDS |
TTATGAAATTGCAGAATGTG+CGG | 0.662542 | 4.2:-92414755 | MS.gene053198:CDS |
ATGATTGACACCAACAAACG+GGG | 0.665562 | 4.2:+92415809 | None:intergenic |
TACAAATCAGAAGTTTGACT+AGG | 0.668845 | 4.2:+92414724 | None:intergenic |
TTAGAGGAGAGTATTGTCTG+TGG | 0.669312 | 4.2:-92415048 | MS.gene053198:CDS |
GGATCATAGCTTAAACACGA+TGG | 0.674970 | 4.2:-92414629 | MS.gene053198:CDS |
TCATAGCTTAAACACGATGG+AGG | 0.690849 | 4.2:-92414626 | MS.gene053198:CDS |
TCAAGCACAATCATTCCATG+CGG | 0.697666 | 4.2:-92415213 | MS.gene053198:CDS |
TCCCCTCCCACACCACAATG+TGG | 0.710147 | 4.2:+92414649 | None:intergenic |
ATTGTGTGTATGATTCTCTG+CGG | 0.733784 | 4.2:-92415518 | MS.gene053198:CDS |
TCCATGGTATGTGATGCCGG+TGG | 0.764195 | 4.2:-92416113 | MS.gene053198:CDS |
CCGGAATGTCAACAACACAG+AGG | 0.797075 | 4.2:-92415365 | MS.gene053198:CDS |
GTATTGTGTTGATTTCAACG+GGG | 0.841514 | 4.2:-92415007 | MS.gene053198:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAGATAAAAATTAAACTAA+CGG | + | chr4.2:92416382-92416401 | None:intergenic | 10.0% |
!! | CATAAAAAATAAAATATAGA+AGG | + | chr4.2:92414921-92414940 | None:intergenic | 10.0% |
!! | TTATTTAAAAAATGATTTCT+GGG | - | chr4.2:92417844-92417863 | MS.gene053198:intron | 10.0% |
!!! | AAATCATTTTTTAAATAACA+TGG | + | chr4.2:92417842-92417861 | None:intergenic | 10.0% |
!!! | TTATTTTTAGTATGTATAAT+AGG | - | chr4.2:92416211-92416230 | MS.gene053198:intron | 10.0% |
!! | AAAAGTTAAATAAAATCAAG+AGG | - | chr4.2:92416816-92416835 | MS.gene053198:intron | 15.0% |
!! | AATGTAATCACAATAATAAT+AGG | + | chr4.2:92418805-92418824 | None:intergenic | 15.0% |
!! | CATTTGATTAAGAAAATAAA+AGG | + | chr4.2:92416489-92416508 | None:intergenic | 15.0% |
!! | GATAAAAATGTAGATAATTT+AGG | - | chr4.2:92416734-92416753 | MS.gene053198:intron | 15.0% |
!! | GTTATTTAAAAAATGATTTC+TGG | - | chr4.2:92417843-92417862 | MS.gene053198:intron | 15.0% |
!!! | AATATTTTCTTTATAAACCT+TGG | - | chr4.2:92416444-92416463 | MS.gene053198:intron | 15.0% |
!!! | ACTTTAAAGTTAATAAAAGA+TGG | + | chr4.2:92414855-92414874 | None:intergenic | 15.0% |
!!! | AGAAAATATTTTTGTAGTTT+TGG | + | chr4.2:92416434-92416453 | None:intergenic | 15.0% |
!!! | ATTTTAAAATACCTCATATT+TGG | - | chr4.2:92414772-92414791 | MS.gene053198:CDS | 15.0% |
!! | AAAATAAAAGGAAAACACTT+GGG | + | chr4.2:92416477-92416496 | None:intergenic | 20.0% |
!! | AAAATTGCTGAAAAATTGAA+AGG | - | chr4.2:92417653-92417672 | MS.gene053198:intron | 20.0% |
!! | AAATAAAAAAATGAGAGAAG+AGG | + | chr4.2:92414811-92414830 | None:intergenic | 20.0% |
!! | AAGAAAAAAACCAATTGTTT+CGG | - | chr4.2:92418756-92418775 | MS.gene053198:CDS | 20.0% |
!! | AATAAAAAAATGAGAGAAGA+GGG | + | chr4.2:92414810-92414829 | None:intergenic | 20.0% |
!! | ACAACATTCATTGAAAAATA+TGG | - | chr4.2:92417761-92417780 | MS.gene053198:intron | 20.0% |
!! | ATTCATTGAAAAATATGGTT+TGG | - | chr4.2:92417766-92417785 | MS.gene053198:intron | 20.0% |
!! | TATTAAATCATGAATCAAGA+AGG | + | chr4.2:92416120-92416139 | None:intergenic | 20.0% |
!! | TCAAAAATTATTTGATGAGT+TGG | + | chr4.2:92416647-92416666 | None:intergenic | 20.0% |
!! | TGAAAGAAAACAACAAAAAA+AGG | - | chr4.2:92415586-92415605 | MS.gene053198:CDS | 20.0% |
!! | TTCATTGAAAAATATGGTTT+GGG | - | chr4.2:92417767-92417786 | MS.gene053198:intron | 20.0% |
!!! | AGTTTTAAGTGTTACTAAAT+CGG | + | chr4.2:92415933-92415952 | None:intergenic | 20.0% |
!!! | GTAAAATGGAGTTTTTTTTT+GGG | - | chr4.2:92415753-92415772 | MS.gene053198:CDS | 20.0% |
!!! | TAATTCTTTTCAAAAGAAAG+TGG | + | chr4.2:92416945-92416964 | None:intergenic | 20.0% |
!!! | TATCTACATTTTTATCGATT+TGG | + | chr4.2:92416730-92416749 | None:intergenic | 20.0% |
!!! | TTTCTTTTTTGCATTTTTAG+CGG | - | chr4.2:92415609-92415628 | MS.gene053198:CDS | 20.0% |
!!! | TTTGAAAATGGTTTTAAGAA+GGG | + | chr4.2:92416607-92416626 | None:intergenic | 20.0% |
!!! | TTTTGAAAATGGTTTTAAGA+AGG | + | chr4.2:92416608-92416627 | None:intergenic | 20.0% |
! | AATATCTTGGGTCAAAAATT+GGG | + | chr4.2:92414687-92414706 | None:intergenic | 25.0% |
! | ACGAAAAATTAAAAGATGCA+TGG | + | chr4.2:92416183-92416202 | None:intergenic | 25.0% |
! | CGAAAAATTAAAAGATGCAT+GGG | + | chr4.2:92416182-92416201 | None:intergenic | 25.0% |
! | GAAAATAAAAGGAAAACACT+TGG | + | chr4.2:92416478-92416497 | None:intergenic | 25.0% |
! | TAATATCTTGGGTCAAAAAT+TGG | + | chr4.2:92414688-92414707 | None:intergenic | 25.0% |
! | TGTATGAAGAAATGATCAAA+TGG | - | chr4.2:92418527-92418546 | MS.gene053198:intron | 25.0% |
! | TTACGAAAATCTAACATTTG+TGG | - | chr4.2:92417142-92417161 | MS.gene053198:intron | 25.0% |
! | TTTCAAAAGAAAGTGGAAAA+AGG | + | chr4.2:92416938-92416957 | None:intergenic | 25.0% |
!! | AAAACTAGAAACTCTAAGAA+AGG | - | chr4.2:92414447-92414466 | MS.gene053198:intron | 25.0% |
!! | AAACTAGAAACTCTAAGAAA+GGG | - | chr4.2:92414448-92414467 | MS.gene053198:intron | 25.0% |
!! | AAACTTGCTTGCTTAAAAAA+TGG | + | chr4.2:92416789-92416808 | None:intergenic | 25.0% |
!! | GTTCAAATACCACATTTTTA+GGG | + | chr4.2:92416916-92416935 | None:intergenic | 25.0% |
!! | TAGAGTACTACGAATATTTA+GGG | - | chr4.2:92416845-92416864 | MS.gene053198:intron | 25.0% |
!! | TATCGGTATGTCTTTTAAAT+CGG | - | chr4.2:92414368-92414387 | MS.gene053198:intron | 25.0% |
!!! | AAGTATTGTGTTGATTTCAA+CGG | - | chr4.2:92418223-92418242 | MS.gene053198:intron | 25.0% |
!!! | ACTTTTAACGGATTAAGAAT+TGG | + | chr4.2:92418658-92418677 | None:intergenic | 25.0% |
!!! | GAATTTTTAAGGCCAAAAAA+CGG | - | chr4.2:92415535-92415554 | MS.gene053198:CDS | 25.0% |
!!! | GGTAAAATGGAGTTTTTTTT+TGG | - | chr4.2:92415752-92415771 | MS.gene053198:CDS | 25.0% |
!!! | GTGTCAAATTGAATTTGTTT+TGG | + | chr4.2:92414945-92414964 | None:intergenic | 25.0% |
!!! | TACATTTTTATCGATTTGGA+AGG | + | chr4.2:92416726-92416745 | None:intergenic | 25.0% |
!!! | TATGTTCAAAGTTAACTTGT+GGG | - | chr4.2:92415513-92415532 | MS.gene053198:CDS | 25.0% |
!!! | TTAACTTGTGGGAATTTTTA+AGG | - | chr4.2:92415524-92415543 | MS.gene053198:CDS | 25.0% |
!!! | TTTTTTCACAATCTTTTCAG+TGG | + | chr4.2:92418722-92418741 | None:intergenic | 25.0% |
AAAGGATGATCGATCAATAT+AGG | + | chr4.2:92414240-92414259 | None:intergenic | 30.0% | |
AAATCGGAAACTAAATATGC+AGG | + | chr4.2:92415917-92415936 | None:intergenic | 30.0% | |
AAATGCAACTATTATCTCGA+AGG | - | chr4.2:92418124-92418143 | MS.gene053198:intron | 30.0% | |
AAGCATCTAACAAATGTATG+AGG | + | chr4.2:92415975-92415994 | None:intergenic | 30.0% | |
AGATAAGTCCAACTAAATCA+CGG | - | chr4.2:92414652-92414671 | MS.gene053198:CDS | 30.0% | |
AGATACAAGTAGAATTTCGT+GGG | - | chr4.2:92418101-92418120 | MS.gene053198:intron | 30.0% | |
AGTAGACAGAATAACAAAAC+GGG | + | chr4.2:92415860-92415879 | None:intergenic | 30.0% | |
ATATCTTGGGTCAAAAATTG+GGG | + | chr4.2:92414686-92414705 | None:intergenic | 30.0% | |
ATGTGTGTAATGTTTAGTTG+TGG | + | chr4.2:92415223-92415242 | None:intergenic | 30.0% | |
CAGTAGACAGAATAACAAAA+CGG | + | chr4.2:92415861-92415880 | None:intergenic | 30.0% | |
CGTGGAAAGATAAATTTAGA+CGG | + | chr4.2:92418352-92418371 | None:intergenic | 30.0% | |
CTAAATTTATCTTTCCACGA+TGG | - | chr4.2:92418353-92418372 | MS.gene053198:intron | 30.0% | |
GAAATATCTTAACATGCCAT+CGG | + | chr4.2:92414475-92414494 | None:intergenic | 30.0% | |
TACAAATCAGAAGTTTGACT+AGG | + | chr4.2:92418511-92418530 | None:intergenic | 30.0% | |
TATCTCCATATACTTGTCAT+GGG | + | chr4.2:92418086-92418105 | None:intergenic | 30.0% | |
TCGTTCCTAATTACATTCTA+CGG | + | chr4.2:92416296-92416315 | None:intergenic | 30.0% | |
TGAAAAGTCAAAGACTTATC+CGG | + | chr4.2:92414730-92414749 | None:intergenic | 30.0% | |
TTAAAAGACATACCGATAGT+AGG | + | chr4.2:92414366-92414385 | None:intergenic | 30.0% | |
TTATGAAATTGCAGAATGTG+CGG | - | chr4.2:92418477-92418496 | MS.gene053198:intron | 30.0% | |
TTCAGTCGTGAAATCAAAAA+GGG | - | chr4.2:92416969-92416988 | MS.gene053198:intron | 30.0% | |
TTTAACATCCACATTAGACA+TGG | - | chr4.2:92416518-92416537 | MS.gene053198:intron | 30.0% | |
! | AACATCACCAAAGTATTCAT+AGG | + | chr4.2:92417354-92417373 | None:intergenic | 30.0% |
! | CTATGTTCAAAGTTAACTTG+TGG | - | chr4.2:92415512-92415531 | MS.gene053198:CDS | 30.0% |
! | CTTTTTCTATGAGATTGACA+TGG | - | chr4.2:92417274-92417293 | MS.gene053198:intron | 30.0% |
! | GGTTCAAATACCACATTTTT+AGG | + | chr4.2:92416917-92416936 | None:intergenic | 30.0% |
! | GTAGAGTACTACGAATATTT+AGG | - | chr4.2:92416844-92416863 | MS.gene053198:intron | 30.0% |
! | TCATGTGCAGAATATTTTCT+GGG | - | chr4.2:92417307-92417326 | MS.gene053198:intron | 30.0% |
! | TGACTTTTCAGCGAAAAATT+CGG | - | chr4.2:92414740-92414759 | MS.gene053198:CDS | 30.0% |
! | TTAAAAAATGATTTCTGGGC+CGG | - | chr4.2:92417848-92417867 | MS.gene053198:intron | 30.0% |
! | TTCATGTGCAGAATATTTTC+TGG | - | chr4.2:92417306-92417325 | MS.gene053198:intron | 30.0% |
!! | ACCACATTTTTAGGGATTAA+GGG | + | chr4.2:92416908-92416927 | None:intergenic | 30.0% |
!! | AGTATTGTGTTGATTTCAAC+GGG | - | chr4.2:92418224-92418243 | MS.gene053198:intron | 30.0% |
!! | ATAACGGTTGGTTTAAAGAA+GGG | - | chr4.2:92414588-92414607 | MS.gene053198:CDS | 30.0% |
!! | ATTTTTAGGGATTAAGGGTT+CGG | + | chr4.2:92416903-92416922 | None:intergenic | 30.0% |
!! | GACAATTTTGATAAACGATC+AGG | - | chr4.2:92417067-92417086 | MS.gene053198:intron | 30.0% |
!! | TACCACATTTTTAGGGATTA+AGG | + | chr4.2:92416909-92416928 | None:intergenic | 30.0% |
!! | TGGTTTGATTTGTGTTGATA+CGG | + | chr4.2:92415308-92415327 | None:intergenic | 30.0% |
!! | TTTTTGAGAGAGAACTACAA+TGG | - | chr4.2:92416660-92416679 | MS.gene053198:intron | 30.0% |
!!! | AGTATGAATGCTTTTTTCGA+TGG | - | chr4.2:92417896-92417915 | MS.gene053198:intron | 30.0% |
!!! | ATACCTTGTTTTGCATGTAT+CGG | - | chr4.2:92416084-92416103 | MS.gene053198:CDS | 30.0% |
!!! | GTTTTGCTGATTCAATTTGT+TGG | + | chr4.2:92415340-92415359 | None:intergenic | 30.0% |
!!! | TATGTGTGGTTGTAGTTTTT+TGG | + | chr4.2:92418428-92418447 | None:intergenic | 30.0% |
AAAACCAATTGTTTCGGTTG+TGG | - | chr4.2:92418762-92418781 | MS.gene053198:CDS | 35.0% | |
AAAACCACTAGTTGACTGTT+GGG | + | chr4.2:92418962-92418981 | None:intergenic | 35.0% | |
AAAGGATACGCACAATACAA+AGG | - | chr4.2:92417671-92417690 | MS.gene053198:intron | 35.0% | |
AAATGGTCTAGCAAGAAGTT+GGG | - | chr4.2:92418544-92418563 | MS.gene053198:intron | 35.0% | |
AAGAGAGAATACGATGAAGT+TGG | + | chr4.2:92416565-92416584 | None:intergenic | 35.0% | |
ACATTACTTCCTATGTCTGA+TGG | - | chr4.2:92418898-92418917 | MS.gene053198:CDS | 35.0% | |
ACATTTATAGAGCTGGGTTA+TGG | + | chr4.2:92415107-92415126 | None:intergenic | 35.0% | |
ACCCTTAATCCCTAAAAATG+TGG | - | chr4.2:92416904-92416923 | MS.gene053198:intron | 35.0% | |
AGAGAAAGATGCTGGTAAAA+TGG | - | chr4.2:92415739-92415758 | MS.gene053198:CDS | 35.0% | |
AGATGCATGGGATTATACTA+AGG | + | chr4.2:92416170-92416189 | None:intergenic | 35.0% | |
AGGTTGTGTTTCCTAATACT+AGG | - | chr4.2:92417600-92417619 | MS.gene053198:intron | 35.0% | |
ATACTTGTTTGTCAAGTAGG+TGG | + | chr4.2:92417390-92417409 | None:intergenic | 35.0% | |
ATCCTACTTTGCTAGAATGA+GGG | - | chr4.2:92417238-92417257 | MS.gene053198:intron | 35.0% | |
ATTGTGTGTATGATTCTCTG+CGG | - | chr4.2:92417714-92417733 | MS.gene053198:intron | 35.0% | |
CAAGAAATCCATGTCTAATG+TGG | + | chr4.2:92416529-92416548 | None:intergenic | 35.0% | |
CATTACTTCCTATGTCTGAT+GGG | - | chr4.2:92418899-92418918 | MS.gene053198:CDS | 35.0% | |
CATTTATAGAGCTGGGTTAT+GGG | + | chr4.2:92415106-92415125 | None:intergenic | 35.0% | |
CCACACATAGAAAGATTTGA+AGG | - | chr4.2:92418439-92418458 | MS.gene053198:intron | 35.0% | |
CCTTCAAATCTTTCTATGTG+TGG | + | chr4.2:92418442-92418461 | None:intergenic | 35.0% | |
CTGAATCCAAAACACAACAT+CGG | - | chr4.2:92415436-92415455 | MS.gene053198:CDS | 35.0% | |
CTTGTTTCATGGCATATTCA+CGG | + | chr4.2:92414416-92414435 | None:intergenic | 35.0% | |
GAAAAGTCAAAGACTTATCC+GGG | + | chr4.2:92414729-92414748 | None:intergenic | 35.0% | |
GAGATACAAGTAGAATTTCG+TGG | - | chr4.2:92418100-92418119 | MS.gene053198:intron | 35.0% | |
GATAAATTCACGCCTACTAT+CGG | - | chr4.2:92414351-92414370 | MS.gene053198:intron | 35.0% | |
GATGCATGGGATTATACTAA+GGG | + | chr4.2:92416169-92416188 | None:intergenic | 35.0% | |
GGATTAAGAATTGGTTGATC+AGG | + | chr4.2:92418649-92418668 | None:intergenic | 35.0% | |
GGTTTGAATGAGTTCAGATT+TGG | + | chr4.2:92415389-92415408 | None:intergenic | 35.0% | |
GTATCTCCATATACTTGTCA+TGG | + | chr4.2:92418087-92418106 | None:intergenic | 35.0% | |
GTCATACTTGTTTGTCAAGT+AGG | + | chr4.2:92417393-92417412 | None:intergenic | 35.0% | |
GTGAATATGCCATGAAACAA+GGG | - | chr4.2:92414415-92414434 | MS.gene053198:intron | 35.0% | |
GTTCAGTCGTGAAATCAAAA+AGG | - | chr4.2:92416968-92416987 | MS.gene053198:intron | 35.0% | |
TAAAACCACTAGTTGACTGT+TGG | + | chr4.2:92418963-92418982 | None:intergenic | 35.0% | |
TATCCTACTTTGCTAGAATG+AGG | - | chr4.2:92417237-92417256 | MS.gene053198:intron | 35.0% | |
TATGACAACCGTGATTTAGT+TGG | + | chr4.2:92414663-92414682 | None:intergenic | 35.0% | |
TCAGTCGTGAAATCAAAAAG+GGG | - | chr4.2:92416970-92416989 | MS.gene053198:intron | 35.0% | |
TGAGACCGTAGAATGTAATT+AGG | - | chr4.2:92416288-92416307 | MS.gene053198:intron | 35.0% | |
TGATGATTGACACCAACAAA+CGG | + | chr4.2:92417428-92417447 | None:intergenic | 35.0% | |
TGATTGCTCAGCTAAGATAA+CGG | - | chr4.2:92414572-92414591 | MS.gene053198:CDS | 35.0% | |
TGTTTCCTAATACTAGGCAT+AGG | - | chr4.2:92417606-92417625 | MS.gene053198:intron | 35.0% | |
TTATACTAACCCATCCGAAT+CGG | - | chr4.2:92415788-92415807 | MS.gene053198:CDS | 35.0% | |
TTGAAATTGTCTCTCGATTG+TGG | + | chr4.2:92418053-92418072 | None:intergenic | 35.0% | |
TTGGTTTAAAGAAGGGTCTA+TGG | - | chr4.2:92414595-92414614 | MS.gene053198:CDS | 35.0% | |
! | AGGTGTTACATTTATAGAGC+TGG | + | chr4.2:92415114-92415133 | None:intergenic | 35.0% |
! | ATCTACATACACCGTTTTAG+AGG | - | chr4.2:92418168-92418187 | MS.gene053198:intron | 35.0% |
! | ATGGGCAAAATTTTGTTGCT+TGG | + | chr4.2:92415088-92415107 | None:intergenic | 35.0% |
! | ATGGTTTGGGTGAAAATGAT+TGG | - | chr4.2:92417780-92417799 | MS.gene053198:intron | 35.0% |
! | ATTAGTTTACAGCCACATTG+TGG | - | chr4.2:92418571-92418590 | MS.gene053198:intron | 35.0% |
! | ATTCTAACTTGTGCAAGAGA+AGG | - | chr4.2:92414495-92414514 | MS.gene053198:CDS | 35.0% |
! | CAATCCATTTTACTAGGTTG+CGG | - | chr4.2:92417452-92417471 | MS.gene053198:intron | 35.0% |
! | CGATTGGTTGTTGTGATTAT+GGG | + | chr4.2:92415414-92415433 | None:intergenic | 35.0% |
! | GACAATACTCTCCTCTAAAA+CGG | + | chr4.2:92418182-92418201 | None:intergenic | 35.0% |
! | GGATTTGAGATTGATGACTT+AGG | + | chr4.2:92415202-92415221 | None:intergenic | 35.0% |
! | GGTGTTACATTTATAGAGCT+GGG | + | chr4.2:92415113-92415132 | None:intergenic | 35.0% |
! | TCGATTGGTTGTTGTGATTA+TGG | + | chr4.2:92415415-92415434 | None:intergenic | 35.0% |
! | TGAATACCATTTTCGAAGAG+CGG | - | chr4.2:92417804-92417823 | MS.gene053198:intron | 35.0% |
! | TGTTAGATTTTCGTAACCAC+CGG | + | chr4.2:92417138-92417157 | None:intergenic | 35.0% |
! | TTCACATTTTTACTCCATCG+TGG | + | chr4.2:92418370-92418389 | None:intergenic | 35.0% |
! | TTGGTGGTATGTTTGATTCA+TGG | + | chr4.2:92414524-92414543 | None:intergenic | 35.0% |
! | TTTCACAATCTTTTCAGTGG+TGG | + | chr4.2:92418719-92418738 | None:intergenic | 35.0% |
! | TTTGATGACACTAGATCTGT+GGG | + | chr4.2:92415469-92415488 | None:intergenic | 35.0% |
!! | ATTTGTTGTTTCAAAGGTCC+CGG | + | chr4.2:92414319-92414338 | None:intergenic | 35.0% |
!! | ATTTTGATAAACGATCAGGC+AGG | - | chr4.2:92417071-92417090 | MS.gene053198:intron | 35.0% |
!! | CAAAATTTTGTTGCTTGGAG+AGG | + | chr4.2:92415083-92415102 | None:intergenic | 35.0% |
!! | CAATTTGTTGGTTGTGGATT+TGG | + | chr4.2:92415328-92415347 | None:intergenic | 35.0% |
!! | CTGATTCAATTTGTTGGTTG+TGG | + | chr4.2:92415334-92415353 | None:intergenic | 35.0% |
!! | GACAGCATTTGTTGTTTCAA+AGG | + | chr4.2:92414325-92414344 | None:intergenic | 35.0% |
!! | GATAACGGTTGGTTTAAAGA+AGG | - | chr4.2:92414587-92414606 | MS.gene053198:CDS | 35.0% |
!! | GTATTGTGTTGATTTCAACG+GGG | - | chr4.2:92418225-92418244 | MS.gene053198:intron | 35.0% |
!! | TCGGATGGGTTAGTATAAAA+GGG | + | chr4.2:92415786-92415805 | None:intergenic | 35.0% |
!! | TGTTTTGGATTCAGATCGAT+TGG | + | chr4.2:92415430-92415449 | None:intergenic | 35.0% |
!! | TTCGGATGGGTTAGTATAAA+AGG | + | chr4.2:92415787-92415806 | None:intergenic | 35.0% |
!! | TTGTTGGTGTCAATCATCAT+GGG | - | chr4.2:92417429-92417448 | MS.gene053198:intron | 35.0% |
!! | TTTGTTGGTGTCAATCATCA+TGG | - | chr4.2:92417428-92417447 | MS.gene053198:intron | 35.0% |
!! | TTTTTAGGGATTAAGGGTTC+GGG | + | chr4.2:92416902-92416921 | None:intergenic | 35.0% |
!!! | AATGGTTTTGATTCCACTTG+TGG | - | chr4.2:92416678-92416697 | MS.gene053198:intron | 35.0% |
!!! | CTGTGTGTTTTTTTCTTTGC+TGG | + | chr4.2:92415174-92415193 | None:intergenic | 35.0% |
!!! | CTTTTTTGCATTTTTAGCGG+CGG | - | chr4.2:92415612-92415631 | MS.gene053198:CDS | 35.0% |
!!! | GGGTTGATGATTTTGTTGTT+GGG | - | chr4.2:92417735-92417754 | MS.gene053198:intron | 35.0% |
!!! | TCTCTTCTCTATCCGTTTTT+TGG | + | chr4.2:92415550-92415569 | None:intergenic | 35.0% |
!!! | TGGTTTTAAGAAGGGATAAG+AGG | + | chr4.2:92416599-92416618 | None:intergenic | 35.0% |
!!! | TTGATGATTTTGTTGTTGGG+TGG | - | chr4.2:92417738-92417757 | MS.gene053198:intron | 35.0% |
AAACTAAATATGCAGGTGGG+GGG | + | chr4.2:92415910-92415929 | None:intergenic | 40.0% | |
AACACTTGGGTTAAAGTCCA+AGG | + | chr4.2:92416464-92416483 | None:intergenic | 40.0% | |
AAGACCGCAACCTAGTAAAA+TGG | + | chr4.2:92417459-92417478 | None:intergenic | 40.0% | |
AAGATACCAAGTCCTTTACC+TGG | - | chr4.2:92417489-92417508 | MS.gene053198:intron | 40.0% | |
AATTGTAACCGATCAGTGCA+AGG | - | chr4.2:92417559-92417578 | MS.gene053198:intron | 40.0% | |
ACAAGGACAAGGAAAAAGAG+CGG | - | chr4.2:92415144-92415163 | MS.gene053198:CDS | 40.0% | |
ACCCAAGATATTACAGACAC+GGG | - | chr4.2:92414695-92414714 | MS.gene053198:CDS | 40.0% | |
ACCCGTGTCTGTAATATCTT+GGG | + | chr4.2:92414699-92414718 | None:intergenic | 40.0% | |
ACTTCCACAACCGAAACAAT+TGG | + | chr4.2:92418769-92418788 | None:intergenic | 40.0% | |
AGACCGATACATGCAAAACA+AGG | + | chr4.2:92416090-92416109 | None:intergenic | 40.0% | |
AGATTGATATGCATGCACAG+AGG | - | chr4.2:92417045-92417064 | MS.gene053198:intron | 40.0% | |
AGGTCTGCCTATGAATACTT+TGG | - | chr4.2:92417344-92417363 | MS.gene053198:intron | 40.0% | |
ATACTTGTCATGGGTGTACT+CGG | + | chr4.2:92418077-92418096 | None:intergenic | 40.0% | |
ATGATTGACACCAACAAACG+GGG | + | chr4.2:92417426-92417445 | None:intergenic | 40.0% | |
CAAAAGAAAGACACCTTCTC+GGG | - | chr4.2:92417189-92417208 | MS.gene053198:intron | 40.0% | |
CAAATGGTCTAGCAAGAAGT+TGG | - | chr4.2:92418543-92418562 | MS.gene053198:intron | 40.0% | |
CACAGATCTAGTGTCATCAA+AGG | - | chr4.2:92415468-92415487 | MS.gene053198:CDS | 40.0% | |
CGGAAACTAAATATGCAGGT+GGG | + | chr4.2:92415913-92415932 | None:intergenic | 40.0% | |
CGTGAATATGCCATGAAACA+AGG | - | chr4.2:92414414-92414433 | MS.gene053198:intron | 40.0% | |
GAAACTAAATATGCAGGTGG+GGG | + | chr4.2:92415911-92415930 | None:intergenic | 40.0% | |
GAACAAAAGTTTCCGTTCCA+TGG | - | chr4.2:92417103-92417122 | MS.gene053198:intron | 40.0% | |
GACCCAAGATATTACAGACA+CGG | - | chr4.2:92414694-92414713 | MS.gene053198:CDS | 40.0% | |
GAGAGATGTCAGAAACTTTG+TGG | - | chr4.2:92417166-92417185 | MS.gene053198:intron | 40.0% | |
GAGCAATCAAGTTTCTTCGT+TGG | + | chr4.2:92414561-92414580 | None:intergenic | 40.0% | |
GATGATTGACACCAACAAAC+GGG | + | chr4.2:92417427-92417446 | None:intergenic | 40.0% | |
GATTCCACTTGTGGATATGT+AGG | - | chr4.2:92416687-92416706 | MS.gene053198:intron | 40.0% | |
GCAAAAGAAAGACACCTTCT+CGG | - | chr4.2:92417188-92417207 | MS.gene053198:intron | 40.0% | |
GGAAACTAAATATGCAGGTG+GGG | + | chr4.2:92415912-92415931 | None:intergenic | 40.0% | |
GGATCATAGCTTAAACACGA+TGG | - | chr4.2:92418603-92418622 | MS.gene053198:intron | 40.0% | |
GGATGATCGATCAATATAGG+AGG | + | chr4.2:92414237-92414256 | None:intergenic | 40.0% | |
GTACACCCATGACAAGTATA+TGG | - | chr4.2:92418078-92418097 | MS.gene053198:intron | 40.0% | |
GTATTCTCTCTTATGCCTTG+AGG | - | chr4.2:92416573-92416592 | MS.gene053198:intron | 40.0% | |
GTGCATATTCTCCTTAGTTG+CGG | + | chr4.2:92416324-92416343 | None:intergenic | 40.0% | |
GTTGGATTCGTCTTCAAAGT+TGG | + | chr4.2:92414543-92414562 | None:intergenic | 40.0% | |
GTTGGTTATGTGTTGGACTT+TGG | + | chr4.2:92415255-92415274 | None:intergenic | 40.0% | |
TATACTAACCCATCCGAATC+GGG | - | chr4.2:92415789-92415808 | MS.gene053198:CDS | 40.0% | |
TCAAGCACAATCATTCCATG+CGG | - | chr4.2:92418019-92418038 | MS.gene053198:intron | 40.0% | |
TCATAGCTTAAACACGATGG+AGG | - | chr4.2:92418606-92418625 | MS.gene053198:intron | 40.0% | |
TCCAAAAAATGACGCGACAA+CGG | - | chr4.2:92417003-92417022 | MS.gene053198:intron | 40.0% | |
TCGGAAACTAAATATGCAGG+TGG | + | chr4.2:92415914-92415933 | None:intergenic | 40.0% | |
TGATCGGTTACAATTCCCAT+TGG | + | chr4.2:92417554-92417573 | None:intergenic | 40.0% | |
TGCATCAATGAGCAAAGATG+TGG | - | chr4.2:92418993-92419012 | MS.gene053198:CDS | 40.0% | |
TGGTCATCTTAGAGTGAAAG+AGG | - | chr4.2:92418324-92418343 | MS.gene053198:intron | 40.0% | |
TGGTTGTTGTGATTATGGGT+CGG | + | chr4.2:92415410-92415429 | None:intergenic | 40.0% | |
TGTTTCGAACAACCAGGTAA+AGG | + | chr4.2:92417504-92417523 | None:intergenic | 40.0% | |
TTACCTGGTTGTTCGAAACA+TGG | - | chr4.2:92417504-92417523 | MS.gene053198:intron | 40.0% | |
TTCCCTCATTCTAGCAAAGT+AGG | + | chr4.2:92417243-92417262 | None:intergenic | 40.0% | |
TTCCTAATACTAGGCATAGG+TGG | - | chr4.2:92417609-92417628 | MS.gene053198:intron | 40.0% | |
TTGTGTGTATGATTCTCTGC+GGG | - | chr4.2:92417715-92417734 | MS.gene053198:intron | 40.0% | |
TTTCGGTTGTGGAAGTAAGT+TGG | - | chr4.2:92418773-92418792 | MS.gene053198:CDS | 40.0% | |
! | AGGAATACGAGGCAGATTTT+CGG | - | chr4.2:92417993-92418012 | MS.gene053198:intron | 40.0% |
! | CATGGGCAATCCATTTTACT+AGG | - | chr4.2:92417446-92417465 | MS.gene053198:intron | 40.0% |
! | CCCTTACGTGGTACTTTTAA+CGG | + | chr4.2:92418670-92418689 | None:intergenic | 40.0% |
! | CTTTGATGACACTAGATCTG+TGG | + | chr4.2:92415470-92415489 | None:intergenic | 40.0% |
! | GAATACCATTTTCGAAGAGC+GGG | - | chr4.2:92417805-92417824 | MS.gene053198:intron | 40.0% |
! | GGATGTTGTTGGTTATGTGT+TGG | + | chr4.2:92415262-92415281 | None:intergenic | 40.0% |
!! | AGACATTCGCTTTTCGTACT+TGG | - | chr4.2:92418304-92418323 | MS.gene053198:intron | 40.0% |
!! | ATGTGTTGGACTTTGGTTTG+AGG | + | chr4.2:92415248-92415267 | None:intergenic | 40.0% |
!! | ATTCCTTTTCAGCCTTGTCT+TGG | + | chr4.2:92417979-92417998 | None:intergenic | 40.0% |
!! | CCGTTAAAAGTACCACGTAA+GGG | - | chr4.2:92418667-92418686 | MS.gene053198:CDS | 40.0% |
!! | GGGTTGGTTATATTTAGGGA+AGG | + | chr4.2:92416880-92416899 | None:intergenic | 40.0% |
!! | TCCGTTAAAAGTACCACGTA+AGG | - | chr4.2:92418666-92418685 | MS.gene053198:CDS | 40.0% |
!! | TCGGGGGTTGGTTATATTTA+GGG | + | chr4.2:92416884-92416903 | None:intergenic | 40.0% |
!! | TGTGTTGGACTTTGGTTTGA+GGG | + | chr4.2:92415247-92415266 | None:intergenic | 40.0% |
!! | TGTTTGCTGTTTGAGTTCAG+AGG | - | chr4.2:92418271-92418290 | MS.gene053198:intron | 40.0% |
!! | TTAGAGGAGAGTATTGTCTG+TGG | - | chr4.2:92418184-92418203 | MS.gene053198:intron | 40.0% |
!! | TTCGGGGGTTGGTTATATTT+AGG | + | chr4.2:92416885-92416904 | None:intergenic | 40.0% |
!! | TTTTAGGGATTAAGGGTTCG+GGG | + | chr4.2:92416901-92416920 | None:intergenic | 40.0% |
!!! | CGGGTTGATGATTTTGTTGT+TGG | - | chr4.2:92417734-92417753 | MS.gene053198:intron | 40.0% |
!!! | TTGTCGCGTCATTTTTTGGA+CGG | + | chr4.2:92417003-92417022 | None:intergenic | 40.0% |
AAGTAAAGCGCGAGTACTTG+TGG | + | chr4.2:92416352-92416371 | None:intergenic | 45.0% | |
ACCAGCATCTTTCTCTCTCT+CGG | + | chr4.2:92415735-92415754 | None:intergenic | 45.0% | |
ACTCCAAGACAAGGCTGAAA+AGG | - | chr4.2:92417973-92417992 | MS.gene053198:intron | 45.0% | |
ACTTGTGGATATGTAGGCAG+AGG | - | chr4.2:92416693-92416712 | MS.gene053198:intron | 45.0% | |
ATTGTGGAATTTGACCCGCA+TGG | + | chr4.2:92418037-92418056 | None:intergenic | 45.0% | |
CAAAACGGGCCAAGAGTAAA+TGG | + | chr4.2:92415846-92415865 | None:intergenic | 45.0% | |
CAACCCAGTCCATTTACTCT+TGG | - | chr4.2:92415834-92415853 | MS.gene053198:CDS | 45.0% | |
CAAGCACAATCATTCCATGC+GGG | - | chr4.2:92418020-92418039 | MS.gene053198:intron | 45.0% | |
CAAGGCTGAAAAGGAATACG+AGG | - | chr4.2:92417982-92418001 | MS.gene053198:intron | 45.0% | |
CACCACCTATGCCTAGTATT+AGG | + | chr4.2:92417614-92417633 | None:intergenic | 45.0% | |
CATCCTTTATTAGCCCCTGA+CGG | - | chr4.2:92414252-92414271 | MS.gene053198:CDS | 45.0% | |
CCTATCTTCTTCTTCTCCTC+CGG | + | chr4.2:92415698-92415717 | None:intergenic | 45.0% | |
CTATGAGATTGACATGGACG+AGG | - | chr4.2:92417280-92417299 | MS.gene053198:intron | 45.0% | |
CTTGTGGATATGTAGGCAGA+GGG | - | chr4.2:92416694-92416713 | MS.gene053198:intron | 45.0% | |
GAACAACCAGGTAAAGGACT+TGG | + | chr4.2:92417498-92417517 | None:intergenic | 45.0% | |
GAACGATGTAACCGCAACTA+AGG | - | chr4.2:92416310-92416329 | MS.gene053198:intron | 45.0% | |
GACCCGTGTCTGTAATATCT+TGG | + | chr4.2:92414700-92414719 | None:intergenic | 45.0% | |
GACGTCCTCAAACTAATCGT+CGG | - | chr4.2:92418689-92418708 | MS.gene053198:CDS | 45.0% | |
GCTTGAAACCCATCAGACAT+AGG | + | chr4.2:92418910-92418929 | None:intergenic | 45.0% | |
GGATTCGTCTTCAAAGTTGG+TGG | + | chr4.2:92414540-92414559 | None:intergenic | 45.0% | |
GGCTATGCAGAATGCAATTC+AGG | - | chr4.2:92417580-92417599 | MS.gene053198:intron | 45.0% | |
GGTTGTTCGAAACATGGCTA+AGG | - | chr4.2:92417510-92417529 | MS.gene053198:intron | 45.0% | |
TAAACGATCAGGCAGGTGTA+CGG | - | chr4.2:92417078-92417097 | MS.gene053198:intron | 45.0% | |
TAGCCATGTTTCGAACAACC+AGG | + | chr4.2:92417510-92417529 | None:intergenic | 45.0% | |
TCATCCCAACAGTCAACTAG+TGG | - | chr4.2:92418955-92418974 | MS.gene053198:CDS | 45.0% | |
TCGGTTACAATTCCCATTGG+AGG | + | chr4.2:92417551-92417570 | None:intergenic | 45.0% | |
TCTGCCTACATATCCACAAG+TGG | + | chr4.2:92416694-92416713 | None:intergenic | 45.0% | |
TCTTTCCCGCTCTTCGAAAA+TGG | + | chr4.2:92417813-92417832 | None:intergenic | 45.0% | |
TTACAGCCACATTGTGGTGT+GGG | - | chr4.2:92418577-92418596 | MS.gene053198:intron | 45.0% | |
TTGATACGGCTGTATTGTGC+CGG | + | chr4.2:92415294-92415313 | None:intergenic | 45.0% | |
TTTACAGCCACATTGTGGTG+TGG | - | chr4.2:92418576-92418595 | MS.gene053198:intron | 45.0% | |
TTTAGGGATTAAGGGTTCGG+GGG | + | chr4.2:92416900-92416919 | None:intergenic | 45.0% | |
TTTCGAAGAGCGGGAAAGAT+GGG | - | chr4.2:92417814-92417833 | MS.gene053198:intron | 45.0% | |
! | AACTCTAAGAAAGGGTCCGA+TGG | - | chr4.2:92414456-92414475 | MS.gene053198:intron | 45.0% |
! | CCTCATATTTGGTTCCGAGT+CGG | - | chr4.2:92414783-92414802 | MS.gene053198:CDS | 45.0% |
! | CCTCTGTGTTGTTGACATTC+CGG | + | chr4.2:92417870-92417889 | None:intergenic | 45.0% |
! | CTCATATTTGGTTCCGAGTC+GGG | - | chr4.2:92414784-92414803 | MS.gene053198:CDS | 45.0% |
! | GATCGCAAACCCTTGTTTCA+TGG | + | chr4.2:92414427-92414446 | None:intergenic | 45.0% |
! | TCGTGACCGATGTTGTGTTT+TGG | + | chr4.2:92415445-92415464 | None:intergenic | 45.0% |
! | TCTCGAAGGTGTGACTACAT+TGG | - | chr4.2:92418138-92418157 | MS.gene053198:intron | 45.0% |
! | TGCTCAGCTAAGATAACGGT+TGG | - | chr4.2:92414576-92414595 | MS.gene053198:CDS | 45.0% |
! | TTTTCGAAGAGCGGGAAAGA+TGG | - | chr4.2:92417813-92417832 | MS.gene053198:intron | 45.0% |
!! | CAAGAGTAAATGGACTGGGT+TGG | + | chr4.2:92415836-92415855 | None:intergenic | 45.0% |
!! | GACAACCGACGATTAGTTTG+AGG | + | chr4.2:92418697-92418716 | None:intergenic | 45.0% |
!! | TCTGATGGGTTTCAAGCGTA+CGG | - | chr4.2:92418913-92418932 | MS.gene053198:CDS | 45.0% |
!!! | ACCGTTGTCGCGTCATTTTT+TGG | + | chr4.2:92417007-92417026 | None:intergenic | 45.0% |
!!! | TTTTAATATTTTTTTGAAAA+TGG | + | chr4.2:92416619-92416638 | None:intergenic | 5.0% |
AAACGATCAGGCAGGTGTAC+GGG | - | chr4.2:92417079-92417098 | MS.gene053198:intron | 50.0% | |
AACAACATCCTCGCCGAAAC+CGG | - | chr4.2:92415272-92415291 | MS.gene053198:CDS | 50.0% | |
AACACCTGCAGACAGCAACA+AGG | - | chr4.2:92415127-92415146 | MS.gene053198:CDS | 50.0% | |
ACACCAACAAACGGGGCAAA+TGG | + | chr4.2:92417419-92417438 | None:intergenic | 50.0% | |
ACATGACAGGCTGTTTGGCT+TGG | + | chr4.2:92415059-92415078 | None:intergenic | 50.0% | |
AGAAAGACACCTTCTCGGGA+AGG | - | chr4.2:92417193-92417212 | MS.gene053198:intron | 50.0% | |
AGAAGGGATAAGAGGCCTCA+AGG | + | chr4.2:92416591-92416610 | None:intergenic | 50.0% | |
AGTTGGGAATGAGCTGCGTT+TGG | + | chr4.2:92415011-92415030 | None:intergenic | 50.0% | |
ATGTCTTCGAGGCCTCCAAT+GGG | - | chr4.2:92417536-92417555 | MS.gene053198:intron | 50.0% | |
CAAAGACTTATCCGGGTTCG+AGG | + | chr4.2:92414722-92414741 | None:intergenic | 50.0% | |
CAACAACGCACTCCAAGACA+AGG | - | chr4.2:92417964-92417983 | MS.gene053198:intron | 50.0% | |
CAGCGAAAAATTCGGCAGAG+AGG | - | chr4.2:92414748-92414767 | MS.gene053198:CDS | 50.0% | |
CCGGAATGTCAACAACACAG+AGG | - | chr4.2:92417867-92417886 | MS.gene053198:intron | 50.0% | |
CCGGAGGAGAAGAAGAAGAT+AGG | - | chr4.2:92415695-92415714 | MS.gene053198:CDS | 50.0% | |
CGGCATCACATACCATGGAA+CGG | + | chr4.2:92417118-92417137 | None:intergenic | 50.0% | |
CGTTCCATGGTATGTGATGC+CGG | - | chr4.2:92417116-92417135 | MS.gene053198:intron | 50.0% | |
CTAGGCATAGGTGGTGTCTA+TGG | - | chr4.2:92417618-92417637 | MS.gene053198:intron | 50.0% | |
CTGACAGGCTGTGATGAGTT+GGG | + | chr4.2:92415027-92415046 | None:intergenic | 50.0% | |
CTGTCTACTGTCTATACCCC+TGG | - | chr4.2:92415871-92415890 | MS.gene053198:CDS | 50.0% | |
GAGGAACATGACAGGCTGTT+TGG | + | chr4.2:92415064-92415083 | None:intergenic | 50.0% | |
GGCTAAGGTGTATGTCTTCG+AGG | - | chr4.2:92417525-92417544 | MS.gene053198:intron | 50.0% | |
TATGTCTTCGAGGCCTCCAA+TGG | - | chr4.2:92417535-92417554 | MS.gene053198:intron | 50.0% | |
TCTCCGTCAGGGGCTAATAA+AGG | + | chr4.2:92414258-92414277 | None:intergenic | 50.0% | |
TGCAGACAGCAACAAGGACA+AGG | - | chr4.2:92415133-92415152 | MS.gene053198:CDS | 50.0% | |
TGCTTGGAGAGGAACATGAC+AGG | + | chr4.2:92415072-92415091 | None:intergenic | 50.0% | |
TTGTCCTTGTTGCTGTCTGC+AGG | + | chr4.2:92415134-92415153 | None:intergenic | 50.0% | |
! | ATGCCATTTGCCCCGTTTGT+TGG | - | chr4.2:92417413-92417432 | MS.gene053198:intron | 50.0% |
! | CGTGTTGACGTTTCGGATTC+CGG | - | chr4.2:92414297-92414316 | MS.gene053198:CDS | 50.0% |
! | CTGCATAGCCTTGCACTGAT+CGG | + | chr4.2:92417570-92417589 | None:intergenic | 50.0% |
! | GGGCCAAGAGTAAATGGACT+GGG | + | chr4.2:92415840-92415859 | None:intergenic | 50.0% |
! | GTGTTGACGTTTCGGATTCC+GGG | - | chr4.2:92414298-92414317 | MS.gene053198:CDS | 50.0% |
! | TGCTGCTCGTGTTGACGTTT+CGG | - | chr4.2:92414290-92414309 | MS.gene053198:CDS | 50.0% |
!! | ATGGACTGGGTTGGTGCATA+CGG | + | chr4.2:92415827-92415846 | None:intergenic | 50.0% |
!! | CCGACTCGGAACCAAATATG+AGG | + | chr4.2:92414786-92414805 | None:intergenic | 50.0% |
ACCACCGGCATCACATACCA+TGG | + | chr4.2:92417123-92417142 | None:intergenic | 55.0% | |
AGACACCTTCTCGGGAAGGA+AGG | - | chr4.2:92417197-92417216 | MS.gene053198:intron | 55.0% | |
AGCCACATTGTGGTGTGGGA+GGG | - | chr4.2:92418581-92418600 | MS.gene053198:intron | 55.0% | |
AGCGCGAGTACTTGTGGTGT+CGG | + | chr4.2:92416346-92416365 | None:intergenic | 55.0% | |
CATCTCCTTCCTTCCCGAGA+AGG | + | chr4.2:92417205-92417224 | None:intergenic | 55.0% | |
CCAACTCATCACAGCCTGTC+AGG | - | chr4.2:92415025-92415044 | MS.gene053198:CDS | 55.0% | |
CCTGACAGGCTGTGATGAGT+TGG | + | chr4.2:92415028-92415047 | None:intergenic | 55.0% | |
CGGGCCAAGAGTAAATGGAC+TGG | + | chr4.2:92415841-92415860 | None:intergenic | 55.0% | |
CTTCTCGGGAAGGAAGGAGA+TGG | - | chr4.2:92417203-92417222 | MS.gene053198:intron | 55.0% | |
GCCGAGAGAGAGAAAGATGC+TGG | - | chr4.2:92415731-92415750 | MS.gene053198:CDS | 55.0% | |
GCTTGGAGAGGAAACCTGAC+AGG | + | chr4.2:92415042-92415061 | None:intergenic | 55.0% | |
GGGGTGCAGTAAGCAAACCA+GGG | + | chr4.2:92415891-92415910 | None:intergenic | 55.0% | |
GGGTGCAGTAAGCAAACCAG+GGG | + | chr4.2:92415890-92415909 | None:intergenic | 55.0% | |
GGTCATGGGTCAACCCGATT+CGG | + | chr4.2:92415805-92415824 | None:intergenic | 55.0% | |
GGTTTCGGCGAGGATGTTGT+TGG | + | chr4.2:92415273-92415292 | None:intergenic | 55.0% | |
GTTTGAGGACGTCCCTTACG+TGG | + | chr4.2:92418682-92418701 | None:intergenic | 55.0% | |
TCCATGGTATGTGATGCCGG+TGG | - | chr4.2:92417119-92417138 | MS.gene053198:intron | 55.0% | |
TCTGGGCTGATGCACGTAGT+AGG | - | chr4.2:92417324-92417343 | MS.gene053198:intron | 55.0% | |
! | GGTTGGTGCATACGGGTCAT+GGG | + | chr4.2:92415819-92415838 | None:intergenic | 55.0% |
!! | ACAGGCTGTTTGGCTTGGAG+AGG | + | chr4.2:92415054-92415073 | None:intergenic | 55.0% |
!! | ATGGGTCAACCCGATTCGGA+TGG | + | chr4.2:92415801-92415820 | None:intergenic | 55.0% |
!! | CGGCTGTATTGTGCCGGTTT+CGG | + | chr4.2:92415288-92415307 | None:intergenic | 55.0% |
!! | TGGACTGGGTTGGTGCATAC+GGG | + | chr4.2:92415826-92415845 | None:intergenic | 55.0% |
!! | TGGGTCAACCCGATTCGGAT+GGG | + | chr4.2:92415800-92415819 | None:intergenic | 55.0% |
ACGCGACAACGGTTGTTCGC+TGG | - | chr4.2:92417014-92417033 | MS.gene053198:intron | 60.0% | |
CAGCCACATTGTGGTGTGGG+AGG | - | chr4.2:92418580-92418599 | MS.gene053198:intron | 60.0% | |
CGGGAAGGAAGGAGATGGCA+GGG | - | chr4.2:92417208-92417227 | MS.gene053198:intron | 60.0% | |
GCCACATTGTGGTGTGGGAG+GGG | - | chr4.2:92418582-92418601 | MS.gene053198:intron | 60.0% | |
GGGATTAAGGGTTCGGGGGT+TGG | + | chr4.2:92416896-92416915 | None:intergenic | 60.0% | |
TCCCCTCCCACACCACAATG+TGG | + | chr4.2:92418586-92418605 | None:intergenic | 60.0% | |
TCGGGAAGGAAGGAGATGGC+AGG | - | chr4.2:92417207-92417226 | MS.gene053198:intron | 60.0% | |
TGAGAGAAGAGGGCCCGACT+CGG | + | chr4.2:92414800-92414819 | None:intergenic | 60.0% | |
! | GGGGGTGCAGTAAGCAAACC+AGG | + | chr4.2:92415892-92415911 | None:intergenic | 60.0% |
!! | GGGTTGGTGCATACGGGTCA+TGG | + | chr4.2:92415820-92415839 | None:intergenic | 60.0% |
!! | GTATTGTGCCGGTTTCGGCG+AGG | + | chr4.2:92415283-92415302 | None:intergenic | 60.0% |
CAGACACGGGTCCTCGAACC+CGG | - | chr4.2:92414708-92414727 | MS.gene053198:CDS | 65.0% | |
CCTGACGGAGAGCTAGCTGG+CGG | - | chr4.2:92414267-92414286 | MS.gene053198:CDS | 65.0% | |
GCTTAGTCCTCCACCGCCGA+GGG | + | chr4.2:92415676-92415695 | None:intergenic | 65.0% | |
TCGGCGGTGGAGGACTAAGC+CGG | - | chr4.2:92415676-92415695 | MS.gene053198:CDS | 65.0% | |
! | CGCCAGCTAGCTCTCCGTCA+GGG | + | chr4.2:92414269-92414288 | None:intergenic | 65.0% |
! | CGGCGGTTAGCCGTCTCAGA+CGG | + | chr4.2:92415643-92415662 | None:intergenic | 65.0% |
! | CGGTTAGCCGTCTCAGACGG+CGG | + | chr4.2:92415640-92415659 | None:intergenic | 65.0% |
! | GCCAGCTAGCTCTCCGTCAG+GGG | + | chr4.2:92414268-92414287 | None:intergenic | 65.0% |
CTCCACCGCCGAGGGACTTC+CGG | + | chr4.2:92415668-92415687 | None:intergenic | 70.0% | |
GAGACGGCTAACCGCCGCAC+CGG | - | chr4.2:92415646-92415665 | MS.gene053198:CDS | 70.0% | |
GCCCCTGACGGAGAGCTAGC+TGG | - | chr4.2:92414264-92414283 | MS.gene053198:CDS | 70.0% | |
GCGGTGGAGGACTAAGCCGG+AGG | - | chr4.2:92415679-92415698 | MS.gene053198:CDS | 70.0% | |
GGCTTAGTCCTCCACCGCCG+AGG | + | chr4.2:92415677-92415696 | None:intergenic | 70.0% | |
! | CCGCCAGCTAGCTCTCCGTC+AGG | + | chr4.2:92414270-92414289 | None:intergenic | 70.0% |
CACCGGAAGTCCCTCGGCGG+TGG | - | chr4.2:92415663-92415682 | MS.gene053198:CDS | 75.0% | |
CCGAGGGACTTCCGGTGCGG+CGG | + | chr4.2:92415660-92415679 | None:intergenic | 75.0% | |
CCGCACCGGAAGTCCCTCGG+CGG | - | chr4.2:92415660-92415679 | MS.gene053198:CDS | 75.0% | |
CCGCCGAGGGACTTCCGGTG+CGG | + | chr4.2:92415663-92415682 | None:intergenic | 75.0% | |
CCGCCGCACCGGAAGTCCCT+CGG | - | chr4.2:92415657-92415676 | MS.gene053198:CDS | 75.0% | |
CGGAAGTCCCTCGGCGGTGG+AGG | - | chr4.2:92415666-92415685 | MS.gene053198:CDS | 75.0% | |
! | GGCGGCGCCGCCGTCTGAGA+CGG | - | chr4.2:92415630-92415649 | MS.gene053198:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 92414222 | 92419032 | 92414222 | ID=MS.gene053198 |
chr4.2 | mRNA | 92414222 | 92419032 | 92414222 | ID=MS.gene053198.t1;Parent=MS.gene053198 |
chr4.2 | exon | 92418661 | 92419032 | 92418661 | ID=MS.gene053198.t1.exon1;Parent=MS.gene053198.t1 |
chr4.2 | CDS | 92418661 | 92419032 | 92418661 | ID=cds.MS.gene053198.t1;Parent=MS.gene053198.t1 |
chr4.2 | exon | 92414468 | 92416189 | 92414468 | ID=MS.gene053198.t1.exon2;Parent=MS.gene053198.t1 |
chr4.2 | CDS | 92414468 | 92416189 | 92414468 | ID=cds.MS.gene053198.t1;Parent=MS.gene053198.t1 |
chr4.2 | exon | 92414222 | 92414359 | 92414222 | ID=MS.gene053198.t1.exon3;Parent=MS.gene053198.t1 |
chr4.2 | CDS | 92414222 | 92414359 | 92414222 | ID=cds.MS.gene053198.t1;Parent=MS.gene053198.t1 |
Gene Sequence |
Protein sequence |