Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053459.t1 | PNX73002.1 | 49.3 | 799 | 141 | 8 | 54 | 622 | 1 | 765 | 4.30E-186 | 661.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053459.t1 | Q9SZL8 | 32.6 | 221 | 132 | 6 | 54 | 259 | 77 | 295 | 7.1e-20 | 100.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053459.t1 | A0A2K3L384 | 49.3 | 799 | 141 | 8 | 54 | 622 | 1 | 765 | 3.1e-186 | 661.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053459.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053459.t1 | MTR_0645s0010 | 97.561 | 82 | 2 | 0 | 252 | 333 | 44 | 125 | 2.21e-47 | 163 |
| MS.gene053459.t1 | MTR_7g446520 | 40.476 | 210 | 110 | 1 | 43 | 252 | 81 | 275 | 3.76e-43 | 158 |
| MS.gene053459.t1 | MTR_7g446480 | 47.287 | 129 | 68 | 0 | 124 | 252 | 140 | 268 | 4.90e-32 | 127 |
| MS.gene053459.t1 | MTR_7g446510 | 45.185 | 135 | 74 | 0 | 118 | 252 | 149 | 283 | 1.18e-30 | 123 |
| MS.gene053459.t1 | MTR_7g028855 | 42.384 | 151 | 84 | 1 | 43 | 190 | 113 | 263 | 1.22e-29 | 122 |
| MS.gene053459.t1 | MTR_1g070355 | 32.031 | 256 | 156 | 6 | 6 | 252 | 31 | 277 | 4.51e-28 | 119 |
| MS.gene053459.t1 | MTR_5g076070 | 28.796 | 191 | 130 | 2 | 25 | 209 | 25 | 215 | 5.31e-24 | 102 |
| MS.gene053459.t1 | MTR_4g035820 | 30.620 | 258 | 155 | 8 | 8 | 252 | 36 | 282 | 5.90e-22 | 100 |
| MS.gene053459.t1 | MTR_6g022080 | 28.070 | 171 | 120 | 1 | 42 | 209 | 77 | 247 | 3.33e-20 | 90.9 |
| MS.gene053459.t1 | MTR_0402s0040 | 34.682 | 173 | 108 | 5 | 54 | 223 | 30 | 200 | 6.24e-20 | 94.0 |
| MS.gene053459.t1 | MTR_8g035530 | 51.429 | 70 | 34 | 0 | 41 | 110 | 5 | 74 | 1.85e-18 | 80.5 |
| MS.gene053459.t1 | MTR_3g080590 | 43.820 | 89 | 48 | 1 | 12 | 100 | 69 | 155 | 1.34e-16 | 77.8 |
| MS.gene053459.t1 | MTR_1g008290 | 30.065 | 153 | 94 | 4 | 90 | 242 | 1 | 140 | 1.32e-14 | 72.0 |
| MS.gene053459.t1 | MTR_6g051425 | 26.697 | 221 | 135 | 8 | 58 | 257 | 25 | 239 | 3.87e-14 | 74.7 |
| MS.gene053459.t1 | MTR_5g015480 | 34.959 | 123 | 72 | 5 | 54 | 171 | 60 | 179 | 1.44e-13 | 71.6 |
| MS.gene053459.t1 | MTR_3g450850 | 29.187 | 209 | 135 | 6 | 56 | 252 | 53 | 260 | 6.52e-13 | 70.9 |
| MS.gene053459.t1 | MTR_8g468460 | 39.583 | 96 | 56 | 2 | 252 | 346 | 11 | 105 | 5.80e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053459.t1 | AT4G38180 | 31.674 | 221 | 136 | 4 | 53 | 259 | 76 | 295 | 1.30e-21 | 100 |
| MS.gene053459.t1 | AT4G38180 | 27.835 | 194 | 125 | 5 | 210 | 391 | 448 | 638 | 5.83e-11 | 66.2 |
| MS.gene053459.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 7.40e-17 | 85.1 |
| MS.gene053459.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 7.82e-17 | 84.7 |
| MS.gene053459.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 7.82e-17 | 84.7 |
| MS.gene053459.t1 | AT5G28530 | 27.451 | 204 | 137 | 5 | 56 | 254 | 61 | 258 | 8.67e-17 | 84.7 |
| MS.gene053459.t1 | AT5G28530 | 27.451 | 204 | 137 | 5 | 56 | 254 | 61 | 258 | 8.89e-17 | 84.7 |
| MS.gene053459.t1 | AT1G10240 | 30.653 | 199 | 130 | 6 | 56 | 247 | 54 | 251 | 2.81e-16 | 83.2 |
| MS.gene053459.t1 | AT1G10240 | 30.653 | 199 | 130 | 6 | 56 | 247 | 54 | 251 | 2.81e-16 | 83.2 |
| MS.gene053459.t1 | AT3G07500 | 32.530 | 166 | 96 | 6 | 54 | 213 | 37 | 192 | 1.03e-12 | 68.2 |
| MS.gene053459.t1 | AT4G38170 | 26.316 | 190 | 125 | 5 | 210 | 387 | 213 | 399 | 4.95e-11 | 66.2 |
Find 121 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGGTTTAGCATTATC+TGG | 0.190370 | 1.4:-29427397 | None:intergenic |
| TCAATATTAACTGTAATATT+TGG | 0.204657 | 1.4:-29427981 | None:intergenic |
| TTCATTTCATTCCGAATTAT+AGG | 0.217986 | 1.4:+29425817 | MS.gene053459:CDS |
| TTCCTCATTATGACCTTCTT+TGG | 0.219846 | 1.4:-29427185 | None:intergenic |
| ATGATTTCATTCAGAAGATT+TGG | 0.259205 | 1.4:+29425739 | MS.gene053459:CDS |
| AATGTCTATATTTGTTGTTT+TGG | 0.267598 | 1.4:-29427934 | None:intergenic |
| TCATATACTAGGTTTCTTAA+TGG | 0.276146 | 1.4:+29425902 | MS.gene053459:CDS |
| TTCAGTAGTGATAATGGTTT+TGG | 0.283086 | 1.4:+29425408 | MS.gene053459:CDS |
| CATGATGTTGATAATATCTT+TGG | 0.283165 | 1.4:+29427849 | MS.gene053459:CDS |
| AGAAGAATGAAGATAGTAAT+AGG | 0.287511 | 1.4:+29425673 | MS.gene053459:CDS |
| GGAATGAAATGAACAAGATT+TGG | 0.316166 | 1.4:-29425807 | None:intergenic |
| TCACTCAATTTCCTATAATT+CGG | 0.322105 | 1.4:-29425828 | None:intergenic |
| CATATACTAGGTTTCTTAAT+GGG | 0.328869 | 1.4:+29425903 | MS.gene053459:CDS |
| GGTTTCTTAATGGGCCAAAA+AGG | 0.332076 | 1.4:+29425912 | MS.gene053459:CDS |
| GTAGAATTCAGTAGTGATAA+TGG | 0.335573 | 1.4:+29425402 | MS.gene053459:CDS |
| ACTTAGTTCATGGTTGTGAT+TGG | 0.360489 | 1.4:-29425781 | None:intergenic |
| GAAGTTAATCCACCCACATT+TGG | 0.365859 | 1.4:-29428199 | None:intergenic |
| CACTTACCGCTGCATTCAAT+AGG | 0.379313 | 1.4:+29427233 | MS.gene053459:CDS |
| CTTAGTTCATGGTTGTGATT+GGG | 0.381070 | 1.4:-29425780 | None:intergenic |
| GAGTTTACCTTTACAGATGA+TGG | 0.397514 | 1.4:+29426080 | MS.gene053459:CDS |
| TAACAATGCCATTGATTATG+AGG | 0.400069 | 1.4:+29427273 | MS.gene053459:CDS |
| AAAGTTCCTAGAAGTCAAAA+AGG | 0.400507 | 1.4:+29426877 | MS.gene053459:CDS |
| GTGTTGACAACTTCCTTGCC+TGG | 0.404467 | 1.4:+29426818 | MS.gene053459:CDS |
| CTACAGACATAATGAATTGT+TGG | 0.407345 | 1.4:+29426766 | MS.gene053459:CDS |
| AATCTTCTGAATGAAATCAT+AGG | 0.410758 | 1.4:-29425736 | None:intergenic |
| AAAGGAGGACATGAAAATCT+TGG | 0.412933 | 1.4:+29425930 | MS.gene053459:CDS |
| AAATGTCAATGGCAACAATA+AGG | 0.413929 | 1.4:+29427351 | MS.gene053459:CDS |
| CATTTGGTACTGGCATAGAA+TGG | 0.421077 | 1.4:-29427821 | None:intergenic |
| GATTTGGAGGACTTAGTTCA+TGG | 0.422475 | 1.4:-29425791 | None:intergenic |
| AACAACATTCCTTTGTATCC+TGG | 0.428695 | 1.4:+29428262 | MS.gene053459:CDS |
| TCGGATAAACAGATTGTTAG+TGG | 0.430560 | 1.4:+29425852 | MS.gene053459:CDS |
| TAACATACACTATTTGTTCC+AGG | 0.434470 | 1.4:-29428280 | None:intergenic |
| AAAGCGTATGCTCGTTTCCA+TGG | 0.435800 | 1.4:+29425549 | MS.gene053459:CDS |
| ACAGTTTACGAGCGTGTTGA+AGG | 0.436704 | 1.4:+29428381 | MS.gene053459:intron |
| CAAGGAAGGGTTAGAATTGA+AGG | 0.441504 | 1.4:+29425990 | MS.gene053459:CDS |
| TCAACATCATGTCTACCATT+TGG | 0.448971 | 1.4:-29427837 | None:intergenic |
| CATTGATTATGAGGAAGCTT+TGG | 0.458582 | 1.4:+29427282 | MS.gene053459:CDS |
| CTCATTATGACCTTCTTTGG+AGG | 0.460106 | 1.4:-29427182 | None:intergenic |
| AATAGGCAAACCATGCGAAC+TGG | 0.460478 | 1.4:+29425690 | MS.gene053459:CDS |
| AAAGTCTAATTTGCAAAAGA+TGG | 0.463829 | 1.4:+29427122 | MS.gene053459:CDS |
| ATTTGGTACTGGCATAGAAT+GGG | 0.470194 | 1.4:-29427820 | None:intergenic |
| AAGGTCAATAAATCTGTTGT+TGG | 0.472287 | 1.4:+29427370 | MS.gene053459:CDS |
| GTTAGTGGTTTGCATTCTCA+AGG | 0.476835 | 1.4:+29425867 | MS.gene053459:CDS |
| ATGCTGAGTTGCTTCACTAT+AGG | 0.481546 | 1.4:-29425358 | None:intergenic |
| GCGATTACTTTGCAATAAAG+AGG | 0.481547 | 1.4:+29425629 | MS.gene053459:CDS |
| GTTTCCATGGGTTTGTCGTA+AGG | 0.482758 | 1.4:+29425562 | MS.gene053459:CDS |
| GGGTTTCATCATTCATGTCA+TGG | 0.487067 | 1.4:-29427800 | None:intergenic |
| CAAAGCTTCCTCATAATCAA+TGG | 0.494233 | 1.4:-29427281 | None:intergenic |
| GAAGCTTCACGCTCAAATCC+AGG | 0.499670 | 1.4:-29426836 | None:intergenic |
| TCATCATTTGCCTCCAAAGA+AGG | 0.501389 | 1.4:+29427172 | MS.gene053459:CDS |
| CAAGATGGAACCATGGTGTT+GGG | 0.503043 | 1.4:+29428131 | MS.gene053459:CDS |
| AAATGATGATATAAAAGCTA+TGG | 0.514775 | 1.4:+29425491 | MS.gene053459:CDS |
| GTCACTCACCATGCTGAGGT+TGG | 0.515437 | 1.4:+29426926 | MS.gene053459:CDS |
| TTATAGGAAATTGAGTGAAT+CGG | 0.515530 | 1.4:+29425833 | MS.gene053459:CDS |
| AAGGAAGGATGATGTGGTAA+AGG | 0.518755 | 1.4:+29425581 | MS.gene053459:CDS |
| CCATGGGTTTGTCGTAAGGA+AGG | 0.524385 | 1.4:+29425566 | MS.gene053459:CDS |
| CGTCGTGAGGGAAATGTCAA+TGG | 0.525065 | 1.4:+29427340 | MS.gene053459:CDS |
| TGCCACATGGATTTGCAAGA+TGG | 0.527779 | 1.4:+29428116 | MS.gene053459:CDS |
| GTAAGAACCTGTCATATACT+AGG | 0.532163 | 1.4:+29425891 | MS.gene053459:CDS |
| CATTCTATGCCAGTACCAAA+TGG | 0.532403 | 1.4:+29427822 | MS.gene053459:CDS |
| GATTATGAGGAAGCTTTGGA+AGG | 0.532969 | 1.4:+29427286 | MS.gene053459:CDS |
| TAACCGACCATCATCTGTAA+AGG | 0.533842 | 1.4:-29426087 | None:intergenic |
| AAATGGTCATGTTCCGCCGA+TGG | 0.535969 | 1.4:+29427209 | MS.gene053459:CDS |
| ATGAAATGAACAAGATTTGG+AGG | 0.540633 | 1.4:-29425804 | None:intergenic |
| AATGGTCATGTTCCGCCGAT+GGG | 0.542538 | 1.4:+29427210 | MS.gene053459:CDS |
| AAGCGTATGCTCGTTTCCAT+GGG | 0.546934 | 1.4:+29425550 | MS.gene053459:CDS |
| ACTTCATGACAGAAATAATG+TGG | 0.547790 | 1.4:-29427075 | None:intergenic |
| CCACCGTACACAGGAAAAGC+GGG | 0.548539 | 1.4:-29428172 | None:intergenic |
| TAAGAAACCTAGTATATGAC+AGG | 0.549198 | 1.4:-29425898 | None:intergenic |
| TCATGTCTACCATTTGGTAC+TGG | 0.552104 | 1.4:-29427831 | None:intergenic |
| GGTATTAAACGTAAGAGAGA+TGG | 0.556812 | 1.4:+29427870 | MS.gene053459:CDS |
| AAGAGAGATGGTGACAAAGC+CGG | 0.567634 | 1.4:+29427882 | MS.gene053459:CDS |
| ACAGAAATAATGTGGGAACA+TGG | 0.568395 | 1.4:-29427067 | None:intergenic |
| AGCAAGACATCCAGTTCGCA+TGG | 0.572129 | 1.4:-29425700 | None:intergenic |
| GCAAGATGGAACCATGGTGT+TGG | 0.572620 | 1.4:+29428130 | MS.gene053459:CDS |
| AACCATGGTGTTGGGTATGT+TGG | 0.578818 | 1.4:+29428139 | MS.gene053459:CDS |
| ATTATGAGGAAGCTTTGGAA+GGG | 0.579688 | 1.4:+29427287 | MS.gene053459:CDS |
| CGATTACTTTGCAATAAAGA+GGG | 0.582695 | 1.4:+29425630 | MS.gene053459:CDS |
| GGAATGTTGTTATAATGTGA+TGG | 0.585101 | 1.4:-29428250 | None:intergenic |
| ATTTGGAGTCACAGAAGCAT+CGG | 0.589265 | 1.4:-29427964 | None:intergenic |
| GTACGGTGGGATTCCAAATG+TGG | 0.589315 | 1.4:+29428186 | MS.gene053459:CDS |
| AAGATAAATGTACGTCGTGA+GGG | 0.589836 | 1.4:+29427328 | MS.gene053459:CDS |
| GGCAAGGAAGTTGTCAACAC+AGG | 0.590629 | 1.4:-29426815 | None:intergenic |
| TGCATTCAATAGGCTTTGTG+AGG | 0.594478 | 1.4:+29427243 | MS.gene053459:CDS |
| TATAACTACACTGATCATCA+AGG | 0.599053 | 1.4:+29425972 | MS.gene053459:CDS |
| CTCCAAAGAAGGTCATAATG+AGG | 0.600558 | 1.4:+29427183 | MS.gene053459:CDS |
| CAAGATAAATGTACGTCGTG+AGG | 0.601675 | 1.4:+29427327 | MS.gene053459:CDS |
| ACTACACTGATCATCAAGGA+AGG | 0.601680 | 1.4:+29425976 | MS.gene053459:CDS |
| TGTGATGGAAGGATGTCTGC+TGG | 0.601718 | 1.4:-29428235 | None:intergenic |
| CAGCGGTAAGTGCCCATCGG+CGG | 0.602402 | 1.4:-29427222 | None:intergenic |
| CACTATTTCCAACCTCAGCA+TGG | 0.602509 | 1.4:-29426934 | None:intergenic |
| TACGGTGGGATTCCAAATGT+GGG | 0.603843 | 1.4:+29428187 | MS.gene053459:CDS |
| CCCACCGTACACAGGAAAAG+CGG | 0.608963 | 1.4:-29428173 | None:intergenic |
| TTCACGCTCAAATCCAGGCA+AGG | 0.610482 | 1.4:-29426831 | None:intergenic |
| TACGAGCGTGTTGAAGGACA+TGG | 0.612523 | 1.4:+29428387 | MS.gene053459:CDS |
| TTGTAGAATGGTATGCCACA+TGG | 0.614759 | 1.4:+29428103 | MS.gene053459:intron |
| ATCTGTCACTCACCATGCTG+AGG | 0.616402 | 1.4:+29426922 | MS.gene053459:CDS |
| TGTCGTAAGGAAGGATGATG+TGG | 0.617262 | 1.4:+29425575 | MS.gene053459:CDS |
| CTATTTGTTCCAGGATACAA+AGG | 0.622428 | 1.4:-29428271 | None:intergenic |
| TGTTGTTATAATGTGATGGA+AGG | 0.624294 | 1.4:-29428246 | None:intergenic |
| CCTTCCTTACGACAAACCCA+TGG | 0.631542 | 1.4:-29425566 | None:intergenic |
| TTACCTTTACAGATGATGGT+CGG | 0.632472 | 1.4:+29426084 | MS.gene053459:CDS |
| AGAAAGACAGAGAATTGCAA+TGG | 0.633911 | 1.4:+29425444 | MS.gene053459:CDS |
| CTTCATGACAGAAATAATGT+GGG | 0.634223 | 1.4:-29427074 | None:intergenic |
| CCAGATAATGCTAAACCCAA+AGG | 0.637551 | 1.4:+29427397 | MS.gene053459:CDS |
| TTTGGAATCCCACCGTACAC+AGG | 0.642001 | 1.4:-29428181 | None:intergenic |
| TCTCGATAATGATACTGTAG+AGG | 0.643267 | 1.4:+29425380 | MS.gene053459:CDS |
| ATGCAGCGGTAAGTGCCCAT+CGG | 0.647794 | 1.4:-29427225 | None:intergenic |
| TGTCATGAAGTATGAGAACA+TGG | 0.649925 | 1.4:+29427087 | MS.gene053459:CDS |
| CTACACTGATCATCAAGGAA+GGG | 0.653825 | 1.4:+29425977 | MS.gene053459:CDS |
| GGTGGGATTCCAAATGTGGG+TGG | 0.655522 | 1.4:+29428190 | MS.gene053459:CDS |
| GGAAGGGTTAGAATTGAAGG+TGG | 0.663188 | 1.4:+29425993 | MS.gene053459:CDS |
| ACAAAGCCTATTGAATGCAG+CGG | 0.663816 | 1.4:-29427239 | None:intergenic |
| TGATGTGGTAAAGGATCACG+AGG | 0.665235 | 1.4:+29425590 | MS.gene053459:CDS |
| ATGGAAGGATGTCTGCTGGA+GGG | 0.689340 | 1.4:-29428231 | None:intergenic |
| AGCTATGGAGTTTAGCACAG+AGG | 0.706449 | 1.4:+29425506 | MS.gene053459:CDS |
| TACCAACATACCCAACACCA+TGG | 0.713448 | 1.4:-29428141 | None:intergenic |
| TTCCATCTTGCAAATCCATG+TGG | 0.717728 | 1.4:-29428118 | None:intergenic |
| GATGGAAGGATGTCTGCTGG+AGG | 0.722334 | 1.4:-29428232 | None:intergenic |
| GGATTTGCAAGATGGAACCA+TGG | 0.726905 | 1.4:+29428124 | MS.gene053459:CDS |
| GATGTGGTAAAGGATCACGA+GGG | 0.855257 | 1.4:+29425591 | MS.gene053459:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAAGTTTTAAAAAAT+TGG | - | chr1.4:29428308-29428327 | None:intergenic | 10.0% |
| !! | AAATCTTGGATTTATAAAAA+AGG | + | chr1.4:29425944-29425963 | MS.gene053459:CDS | 15.0% |
| !! | TCAATATTAACTGTAATATT+TGG | - | chr1.4:29427984-29428003 | None:intergenic | 15.0% |
| !!! | TGTATGATTTTTTCATTTTA+GGG | - | chr1.4:29427426-29427445 | None:intergenic | 15.0% |
| !!! | TTGTATGATTTTTTCATTTT+AGG | - | chr1.4:29427427-29427446 | None:intergenic | 15.0% |
| !! | AAATGATGATATAAAAGCTA+TGG | + | chr1.4:29425491-29425510 | MS.gene053459:CDS | 20.0% |
| !! | ATATAAATTGAAGCAAATGT+GGG | + | chr1.4:29426598-29426617 | MS.gene053459:intron | 20.0% |
| !!! | AATGTCTATATTTGTTGTTT+TGG | - | chr1.4:29427937-29427956 | None:intergenic | 20.0% |
| !!! | GTATGATTTTTTCATTTTAG+GGG | - | chr1.4:29427425-29427444 | None:intergenic | 20.0% |
| !!! | TCGGTTAGAAAATATATTTT+GGG | + | chr1.4:29426103-29426122 | MS.gene053459:intron | 20.0% |
| !!! | TGGAAATAGTGTAATTTTTA+GGG | + | chr1.4:29426946-29426965 | MS.gene053459:CDS | 20.0% |
| !!! | TTGGAAATAGTGTAATTTTT+AGG | + | chr1.4:29426945-29426964 | MS.gene053459:CDS | 20.0% |
| ! | AAACAATAGAGACATATAAG+TGG | + | chr1.4:29426285-29426304 | MS.gene053459:intron | 25.0% |
| ! | AACAATAGAGACATATAAGT+GGG | + | chr1.4:29426286-29426305 | MS.gene053459:intron | 25.0% |
| ! | AATCCTGTAAAAATTACAAG+CGG | - | chr1.4:29426215-29426234 | None:intergenic | 25.0% |
| ! | AATCTTCTGAATGAAATCAT+AGG | - | chr1.4:29425739-29425758 | None:intergenic | 25.0% |
| ! | AATTAAAGCACATGCAAAAA+TGG | - | chr1.4:29426258-29426277 | None:intergenic | 25.0% |
| ! | AATTATGCAGAAAATCAACA+AGG | - | chr1.4:29426727-29426746 | None:intergenic | 25.0% |
| ! | AGAAGAATGAAGATAGTAAT+AGG | + | chr1.4:29425673-29425692 | MS.gene053459:CDS | 25.0% |
| ! | ATGATTTCATTCAGAAGATT+TGG | + | chr1.4:29425739-29425758 | MS.gene053459:CDS | 25.0% |
| ! | ATGGTCAAAAACAATAAAGA+AGG | + | chr1.4:29427141-29427160 | MS.gene053459:CDS | 25.0% |
| ! | CATATAAATTGAAGCAAATG+TGG | + | chr1.4:29426597-29426616 | MS.gene053459:intron | 25.0% |
| ! | CATATACTAGGTTTCTTAAT+GGG | + | chr1.4:29425903-29425922 | MS.gene053459:CDS | 25.0% |
| ! | TCACTCAATTTCCTATAATT+CGG | - | chr1.4:29425831-29425850 | None:intergenic | 25.0% |
| ! | TCATATACTAGGTTTCTTAA+TGG | + | chr1.4:29425902-29425921 | MS.gene053459:CDS | 25.0% |
| ! | TTATAGGAAATTGAGTGAAT+CGG | + | chr1.4:29425833-29425852 | MS.gene053459:CDS | 25.0% |
| ! | TTCATTTCATTCCGAATTAT+AGG | + | chr1.4:29425817-29425836 | MS.gene053459:CDS | 25.0% |
| !! | AAAGGTAAACTCTGAAAAAA+AGG | - | chr1.4:29426072-29426091 | None:intergenic | 25.0% |
| !! | AAAGTCTAATTTGCAAAAGA+TGG | + | chr1.4:29427122-29427141 | MS.gene053459:CDS | 25.0% |
| !! | ATACCTGTTCTTTTTATAAG+TGG | - | chr1.4:29426186-29426205 | None:intergenic | 25.0% |
| !! | GTCGGTTAGAAAATATATTT+TGG | + | chr1.4:29426102-29426121 | MS.gene053459:intron | 25.0% |
| !! | TTTTGCAAATTAGACTTTCT+GGG | - | chr1.4:29427120-29427139 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTTTTATGTCC+AGG | + | chr1.4:29427767-29427786 | MS.gene053459:intron | 25.0% |
| !!! | ATGTTTTGATTGTTGTAGAA+TGG | + | chr1.4:29428091-29428110 | MS.gene053459:intron | 25.0% |
| !!! | CATGATGTTGATAATATCTT+TGG | + | chr1.4:29427849-29427868 | MS.gene053459:CDS | 25.0% |
| AAAGTTCCTAGAAGTCAAAA+AGG | + | chr1.4:29426877-29426896 | MS.gene053459:CDS | 30.0% | |
| AAATGTCAATGGCAACAATA+AGG | + | chr1.4:29427351-29427370 | MS.gene053459:CDS | 30.0% | |
| AAGGTCAATAAATCTGTTGT+TGG | + | chr1.4:29427370-29427389 | MS.gene053459:CDS | 30.0% | |
| AAGGTGTGAATTCATTTATC+AGG | + | chr1.4:29426678-29426697 | MS.gene053459:intron | 30.0% | |
| ACTTCATGACAGAAATAATG+TGG | - | chr1.4:29427078-29427097 | None:intergenic | 30.0% | |
| AGGTCATAATGAGGAAAAAA+TGG | + | chr1.4:29427192-29427211 | MS.gene053459:CDS | 30.0% | |
| ATGAAATGAACAAGATTTGG+AGG | - | chr1.4:29425807-29425826 | None:intergenic | 30.0% | |
| ATGGTGTATCAAAGAATAAG+TGG | + | chr1.4:29426564-29426583 | MS.gene053459:intron | 30.0% | |
| CGATTACTTTGCAATAAAGA+GGG | + | chr1.4:29425630-29425649 | MS.gene053459:CDS | 30.0% | |
| CTACAGACATAATGAATTGT+TGG | + | chr1.4:29426766-29426785 | MS.gene053459:CDS | 30.0% | |
| CTTCATGACAGAAATAATGT+GGG | - | chr1.4:29427077-29427096 | None:intergenic | 30.0% | |
| GGAATGAAATGAACAAGATT+TGG | - | chr1.4:29425810-29425829 | None:intergenic | 30.0% | |
| GGAATGTTGTTATAATGTGA+TGG | - | chr1.4:29428253-29428272 | None:intergenic | 30.0% | |
| GTAGAATTCAGTAGTGATAA+TGG | + | chr1.4:29425402-29425421 | MS.gene053459:CDS | 30.0% | |
| TAACATACACTATTTGTTCC+AGG | - | chr1.4:29428283-29428302 | None:intergenic | 30.0% | |
| TAAGAAACCTAGTATATGAC+AGG | - | chr1.4:29425901-29425920 | None:intergenic | 30.0% | |
| TATAACTACACTGATCATCA+AGG | + | chr1.4:29425972-29425991 | MS.gene053459:CDS | 30.0% | |
| TGGTGTATCAAAGAATAAGT+GGG | + | chr1.4:29426565-29426584 | MS.gene053459:intron | 30.0% | |
| ! | AGGCTTGATTATGAATGTTT+TGG | + | chr1.4:29426140-29426159 | MS.gene053459:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTTTC+TGG | - | chr1.4:29427121-29427140 | None:intergenic | 30.0% |
| ! | GGTGTTAAATGTGTTTTCAA+AGG | + | chr1.4:29426307-29426326 | MS.gene053459:intron | 30.0% |
| ! | TAACAATGCCATTGATTATG+AGG | + | chr1.4:29427273-29427292 | MS.gene053459:CDS | 30.0% |
| ! | TGTTGTTATAATGTGATGGA+AGG | - | chr1.4:29428249-29428268 | None:intergenic | 30.0% |
| ! | TTGAACTCTTCTAAGAATCT+GGG | - | chr1.4:29426476-29426495 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTTTCGTACA+TGG | - | chr1.4:29426333-29426352 | None:intergenic | 30.0% |
| !! | GCTACTTTGAGTTATTTTCA+GGG | + | chr1.4:29426026-29426045 | MS.gene053459:CDS | 30.0% |
| !!! | GATAATGGTTTTGGTAATGA+TGG | + | chr1.4:29425417-29425436 | MS.gene053459:CDS | 30.0% |
| !!! | TGCTACTTTGAGTTATTTTC+AGG | + | chr1.4:29426025-29426044 | MS.gene053459:CDS | 30.0% |
| !!! | TTCAGTAGTGATAATGGTTT+TGG | + | chr1.4:29425408-29425427 | MS.gene053459:CDS | 30.0% |
| !!! | TTTTTAGGGTTAACGTTTAC+CGG | + | chr1.4:29426960-29426979 | MS.gene053459:CDS | 30.0% |
| AAAGGAGGACATGAAAATCT+TGG | + | chr1.4:29425930-29425949 | MS.gene053459:CDS | 35.0% | |
| AACAACATTCCTTTGTATCC+TGG | + | chr1.4:29428262-29428281 | MS.gene053459:CDS | 35.0% | |
| AAGAGAGTTGTTGACAGTTA+TGG | + | chr1.4:29426545-29426564 | MS.gene053459:intron | 35.0% | |
| AAGATAAATGTACGTCGTGA+GGG | + | chr1.4:29427328-29427347 | MS.gene053459:CDS | 35.0% | |
| ACAGAAATAATGTGGGAACA+TGG | - | chr1.4:29427070-29427089 | None:intergenic | 35.0% | |
| ACAGCAAATTCATCACAAGA+TGG | - | chr1.4:29427737-29427756 | None:intergenic | 35.0% | |
| ACATCAATTCCAGCAAGTAT+TGG | - | chr1.4:29427520-29427539 | None:intergenic | 35.0% | |
| ACGCCACTTATAAAAAGAAC+AGG | + | chr1.4:29426180-29426199 | MS.gene053459:intron | 35.0% | |
| ACTTAGTTCATGGTTGTGAT+TGG | - | chr1.4:29425784-29425803 | None:intergenic | 35.0% | |
| AGAAAGACAGAGAATTGCAA+TGG | + | chr1.4:29425444-29425463 | MS.gene053459:CDS | 35.0% | |
| AGAAGTCAAAAAGGCGATAA+AGG | + | chr1.4:29426886-29426905 | MS.gene053459:CDS | 35.0% | |
| CAAAGCTTCCTCATAATCAA+TGG | - | chr1.4:29427284-29427303 | None:intergenic | 35.0% | |
| CTATTTGTTCCAGGATACAA+AGG | - | chr1.4:29428274-29428293 | None:intergenic | 35.0% | |
| CTTAGTTCATGGTTGTGATT+GGG | - | chr1.4:29425783-29425802 | None:intergenic | 35.0% | |
| GAGATGTATTTCCGAATTCA+AGG | + | chr1.4:29426396-29426415 | MS.gene053459:intron | 35.0% | |
| GAGTTTACCTTTACAGATGA+TGG | + | chr1.4:29426080-29426099 | MS.gene053459:CDS | 35.0% | |
| GCGATTACTTTGCAATAAAG+AGG | + | chr1.4:29425629-29425648 | MS.gene053459:CDS | 35.0% | |
| GGATAAAGAAGAAGATGAGA+AGG | + | chr1.4:29427570-29427589 | MS.gene053459:intron | 35.0% | |
| GGTATTAAACGTAAGAGAGA+TGG | + | chr1.4:29427870-29427889 | MS.gene053459:CDS | 35.0% | |
| GTAAGAACCTGTCATATACT+AGG | + | chr1.4:29425891-29425910 | MS.gene053459:CDS | 35.0% | |
| TCAACATCATGTCTACCATT+TGG | - | chr1.4:29427840-29427859 | None:intergenic | 35.0% | |
| TCGGATAAACAGATTGTTAG+TGG | + | chr1.4:29425852-29425871 | MS.gene053459:CDS | 35.0% | |
| TCTCGATAATGATACTGTAG+AGG | + | chr1.4:29425380-29425399 | MS.gene053459:CDS | 35.0% | |
| TGATGTCACATTTGTAGATG+AGG | + | chr1.4:29427534-29427553 | MS.gene053459:intron | 35.0% | |
| TGTCATGAAGTATGAGAACA+TGG | + | chr1.4:29427087-29427106 | MS.gene053459:CDS | 35.0% | |
| TTCCTCATTATGACCTTCTT+TGG | - | chr1.4:29427188-29427207 | None:intergenic | 35.0% | |
| TTCTAACTCCACACACAAAA+TGG | - | chr1.4:29426643-29426662 | None:intergenic | 35.0% | |
| ! | AAGCCGCTTGTAATTTTTAC+AGG | + | chr1.4:29426209-29426228 | MS.gene053459:intron | 35.0% |
| ! | AGAGTCTTGTGTTGAAAAAC+CGG | - | chr1.4:29427904-29427923 | None:intergenic | 35.0% |
| ! | CATTGATTATGAGGAAGCTT+TGG | + | chr1.4:29427282-29427301 | MS.gene053459:CDS | 35.0% |
| ! | GATTTTCATGTCCTCCTTTT+TGG | - | chr1.4:29425929-29425948 | None:intergenic | 35.0% |
| ! | GTTGAACTCTTCTAAGAATC+TGG | - | chr1.4:29426477-29426496 | None:intergenic | 35.0% |
| ! | TTACCTTTACAGATGATGGT+CGG | + | chr1.4:29426084-29426103 | MS.gene053459:CDS | 35.0% |
| !! | ATTATGAGGAAGCTTTGGAA+GGG | + | chr1.4:29427287-29427306 | MS.gene053459:CDS | 35.0% |
| !! | ATTTGGTACTGGCATAGAAT+GGG | - | chr1.4:29427823-29427842 | None:intergenic | 35.0% |
| !! | CCTCATTGATTTATCTCCAT+CGG | - | chr1.4:29426366-29426385 | None:intergenic | 35.0% |
| !! | TTTTTCAACACAAGACTCTG+CGG | + | chr1.4:29427905-29427924 | MS.gene053459:CDS | 35.0% |
| !!! | TTATCGCCTTTTTGACTTCT+AGG | - | chr1.4:29426886-29426905 | None:intergenic | 35.0% |
| !!! | TTATGAATGTTTTGGCGATG+TGG | + | chr1.4:29426148-29426167 | MS.gene053459:intron | 35.0% |
| !!! | TTTTTGGGTTCATCATGACA+AGG | + | chr1.4:29426994-29427013 | MS.gene053459:CDS | 35.0% |
| AAGGAAGGATGATGTGGTAA+AGG | + | chr1.4:29425581-29425600 | MS.gene053459:CDS | 40.0% | |
| ACAAAGCCTATTGAATGCAG+CGG | - | chr1.4:29427242-29427261 | None:intergenic | 40.0% | |
| ACTACACTGATCATCAAGGA+AGG | + | chr1.4:29425976-29425995 | MS.gene053459:CDS | 40.0% | |
| AGAACGACATCGATATGTGA+AGG | + | chr1.4:29426659-29426678 | MS.gene053459:intron | 40.0% | |
| AGAAGATGAGAAGGAGAAAG+AGG | + | chr1.4:29427579-29427598 | MS.gene053459:intron | 40.0% | |
| ATGCTGAGTTGCTTCACTAT+AGG | - | chr1.4:29425361-29425380 | None:intergenic | 40.0% | |
| CAAAAATGGTCGTTTCACCA+TGG | - | chr1.4:29426244-29426263 | None:intergenic | 40.0% | |
| CAAGATAAATGTACGTCGTG+AGG | + | chr1.4:29427327-29427346 | MS.gene053459:CDS | 40.0% | |
| CAAGGAAGGGTTAGAATTGA+AGG | + | chr1.4:29425990-29426009 | MS.gene053459:CDS | 40.0% | |
| CACTCAGACTCAAATTGTTC+AGG | - | chr1.4:29426524-29426543 | None:intergenic | 40.0% | |
| CATTCTATGCCAGTACCAAA+TGG | + | chr1.4:29427822-29427841 | MS.gene053459:CDS | 40.0% | |
| CCAGATAATGCTAAACCCAA+AGG | + | chr1.4:29427397-29427416 | MS.gene053459:CDS | 40.0% | |
| CCGATGGAGATAAATCAATG+AGG | + | chr1.4:29426363-29426382 | MS.gene053459:intron | 40.0% | |
| CTACACTGATCATCAAGGAA+GGG | + | chr1.4:29425977-29425996 | MS.gene053459:CDS | 40.0% | |
| CTCATTATGACCTTCTTTGG+AGG | - | chr1.4:29427185-29427204 | None:intergenic | 40.0% | |
| CTCCAAAGAAGGTCATAATG+AGG | + | chr1.4:29427183-29427202 | MS.gene053459:CDS | 40.0% | |
| CTGAACAATTTGAGTCTGAG+TGG | + | chr1.4:29426522-29426541 | MS.gene053459:intron | 40.0% | |
| GAAGTTAATCCACCCACATT+TGG | - | chr1.4:29428202-29428221 | None:intergenic | 40.0% | |
| GACGTTGTTCTCGTTGTAAA+AGG | + | chr1.4:29427470-29427489 | MS.gene053459:intron | 40.0% | |
| GATGTAGATGCCATGAACAA+AGG | - | chr1.4:29426427-29426446 | None:intergenic | 40.0% | |
| GATTTGGAGGACTTAGTTCA+TGG | - | chr1.4:29425794-29425813 | None:intergenic | 40.0% | |
| GGGTTTCATCATTCATGTCA+TGG | - | chr1.4:29427803-29427822 | None:intergenic | 40.0% | |
| TAACCGACCATCATCTGTAA+AGG | - | chr1.4:29426090-29426109 | None:intergenic | 40.0% | |
| TCATCATTTGCCTCCAAAGA+AGG | + | chr1.4:29427172-29427191 | MS.gene053459:CDS | 40.0% | |
| TCATGTCTACCATTTGGTAC+TGG | - | chr1.4:29427834-29427853 | None:intergenic | 40.0% | |
| TGTCACATTTGTAGATGAGG+AGG | + | chr1.4:29427537-29427556 | MS.gene053459:intron | 40.0% | |
| TGTTCTCGTTGTAAAAGGCA+TGG | + | chr1.4:29427475-29427494 | MS.gene053459:intron | 40.0% | |
| TTCCATCTTGCAAATCCATG+TGG | - | chr1.4:29428121-29428140 | None:intergenic | 40.0% | |
| TTGTAGAATGGTATGCCACA+TGG | + | chr1.4:29428103-29428122 | MS.gene053459:intron | 40.0% | |
| TTTACAGGATTCAACCACCA+TGG | + | chr1.4:29426224-29426243 | MS.gene053459:intron | 40.0% | |
| ! | ATTTGGAGTCACAGAAGCAT+CGG | - | chr1.4:29427967-29427986 | None:intergenic | 40.0% |
| ! | CCTTTGGGTTTAGCATTATC+TGG | - | chr1.4:29427400-29427419 | None:intergenic | 40.0% |
| ! | GGTTTCTTAATGGGCCAAAA+AGG | + | chr1.4:29425912-29425931 | MS.gene053459:CDS | 40.0% |
| ! | GTTAGTGGTTTGCATTCTCA+AGG | + | chr1.4:29425867-29425886 | MS.gene053459:CDS | 40.0% |
| ! | TGCATTCAATAGGCTTTGTG+AGG | + | chr1.4:29427243-29427262 | MS.gene053459:CDS | 40.0% |
| ! | TTCTTAATGGGCCAAAAAGG+AGG | + | chr1.4:29425915-29425934 | MS.gene053459:CDS | 40.0% |
| !! | AGAAAGTGTCCAATACTTGC+TGG | + | chr1.4:29427508-29427527 | MS.gene053459:intron | 40.0% |
| !! | CATTTGGTACTGGCATAGAA+TGG | - | chr1.4:29427824-29427843 | None:intergenic | 40.0% |
| !! | GATTATGAGGAAGCTTTGGA+AGG | + | chr1.4:29427286-29427305 | MS.gene053459:CDS | 40.0% |
| !! | TTCATTTTAGGGGCTCCTTT+GGG | - | chr1.4:29427415-29427434 | None:intergenic | 40.0% |
| !! | TTTCATTTTAGGGGCTCCTT+TGG | - | chr1.4:29427416-29427435 | None:intergenic | 40.0% |
| AAAGCGTATGCTCGTTTCCA+TGG | + | chr1.4:29425549-29425568 | MS.gene053459:CDS | 45.0% | |
| AAATGGTCGTTTCACCATGG+TGG | - | chr1.4:29426241-29426260 | None:intergenic | 45.0% | |
| AAGAGAGATGGTGACAAAGC+CGG | + | chr1.4:29427882-29427901 | MS.gene053459:CDS | 45.0% | |
| AAGCGTATGCTCGTTTCCAT+GGG | + | chr1.4:29425550-29425569 | MS.gene053459:CDS | 45.0% | |
| AATAGGCAAACCATGCGAAC+TGG | + | chr1.4:29425690-29425709 | MS.gene053459:CDS | 45.0% | |
| ACAGTTTACGAGCGTGTTGA+AGG | + | chr1.4:29428381-29428400 | MS.gene053459:intron | 45.0% | |
| ACGAGGGAAAAATTGTTGCG+CGG | + | chr1.4:29425607-29425626 | MS.gene053459:CDS | 45.0% | |
| AGAGGATGAGAAGGAATACG+AGG | + | chr1.4:29427597-29427616 | MS.gene053459:intron | 45.0% | |
| AGCTATGGAGTTTAGCACAG+AGG | + | chr1.4:29425506-29425525 | MS.gene053459:CDS | 45.0% | |
| ATTTGTAGATGAGGAGGAGG+AGG | + | chr1.4:29427543-29427562 | MS.gene053459:intron | 45.0% | |
| CAAAGGCGATGCCTTGAATT+CGG | - | chr1.4:29426410-29426429 | None:intergenic | 45.0% | |
| CAAGATGGAACCATGGTGTT+GGG | + | chr1.4:29428131-29428150 | MS.gene053459:CDS | 45.0% | |
| CACATTTGTAGATGAGGAGG+AGG | + | chr1.4:29427540-29427559 | MS.gene053459:intron | 45.0% | |
| CACTATTTCCAACCTCAGCA+TGG | - | chr1.4:29426937-29426956 | None:intergenic | 45.0% | |
| CACTTACCGCTGCATTCAAT+AGG | + | chr1.4:29427233-29427252 | MS.gene053459:CDS | 45.0% | |
| CCAAAAGCGATTGTTACCGA+TGG | + | chr1.4:29426347-29426366 | MS.gene053459:intron | 45.0% | |
| CCCAAAAAGCTGCATCTTTC+CGG | - | chr1.4:29426982-29427001 | None:intergenic | 45.0% | |
| GAAGGAGAAAGAGGATGAGA+AGG | + | chr1.4:29427588-29427607 | MS.gene053459:intron | 45.0% | |
| GATGTGGTAAAGGATCACGA+GGG | + | chr1.4:29425591-29425610 | MS.gene053459:CDS | 45.0% | |
| GGAAGGGTTAGAATTGAAGG+TGG | + | chr1.4:29425993-29426012 | MS.gene053459:CDS | 45.0% | |
| GGATTTGCAAGATGGAACCA+TGG | + | chr1.4:29428124-29428143 | MS.gene053459:CDS | 45.0% | |
| GTTTCCATGGGTTTGTCGTA+AGG | + | chr1.4:29425562-29425581 | MS.gene053459:CDS | 45.0% | |
| TACCAACATACCCAACACCA+TGG | - | chr1.4:29428144-29428163 | None:intergenic | 45.0% | |
| TACGGTGGGATTCCAAATGT+GGG | + | chr1.4:29428187-29428206 | MS.gene053459:CDS | 45.0% | |
| TGATGTGGTAAAGGATCACG+AGG | + | chr1.4:29425590-29425609 | MS.gene053459:CDS | 45.0% | |
| TGCCACATGGATTTGCAAGA+TGG | + | chr1.4:29428116-29428135 | MS.gene053459:CDS | 45.0% | |
| TGTCATGGCTTATAGACACC+TGG | - | chr1.4:29427788-29427807 | None:intergenic | 45.0% | |
| TGTCGTAAGGAAGGATGATG+TGG | + | chr1.4:29425575-29425594 | MS.gene053459:CDS | 45.0% | |
| ! | AACCATGGTGTTGGGTATGT+TGG | + | chr1.4:29428139-29428158 | MS.gene053459:CDS | 45.0% |
| ! | ACCGGAAAGATGCAGCTTTT+TGG | + | chr1.4:29426978-29426997 | MS.gene053459:CDS | 45.0% |
| ! | ATGCGAGACCATTTTGTGTG+TGG | + | chr1.4:29426632-29426651 | MS.gene053459:intron | 45.0% |
| ! | CCATCGGTAACAATCGCTTT+TGG | - | chr1.4:29426350-29426369 | None:intergenic | 45.0% |
| ! | CCGGAAAGATGCAGCTTTTT+GGG | + | chr1.4:29426979-29426998 | MS.gene053459:CDS | 45.0% |
| !! | TTTCCCGCTTTTCCTGTGTA+CGG | + | chr1.4:29428169-29428188 | MS.gene053459:CDS | 45.0% |
| AAATGGTCATGTTCCGCCGA+TGG | + | chr1.4:29427209-29427228 | MS.gene053459:CDS | 50.0% | |
| AATGGTCATGTTCCGCCGAT+GGG | + | chr1.4:29427210-29427229 | MS.gene053459:CDS | 50.0% | |
| AGATGAGGAGGAGGAGGAAA+AGG | + | chr1.4:29427549-29427568 | MS.gene053459:intron | 50.0% | |
| AGCAAGACATCCAGTTCGCA+TGG | - | chr1.4:29425703-29425722 | None:intergenic | 50.0% | |
| ATCTGTCACTCACCATGCTG+AGG | + | chr1.4:29426922-29426941 | MS.gene053459:CDS | 50.0% | |
| ATGGAAGGATGTCTGCTGGA+GGG | - | chr1.4:29428234-29428253 | None:intergenic | 50.0% | |
| CCATGGGTTTGTCGTAAGGA+AGG | + | chr1.4:29425566-29425585 | MS.gene053459:CDS | 50.0% | |
| CCTTCCTTACGACAAACCCA+TGG | - | chr1.4:29425569-29425588 | None:intergenic | 50.0% | |
| CGTCGTGAGGGAAATGTCAA+TGG | + | chr1.4:29427340-29427359 | MS.gene053459:CDS | 50.0% | |
| GAAGCTTCACGCTCAAATCC+AGG | - | chr1.4:29426839-29426858 | None:intergenic | 50.0% | |
| GCAAGATGGAACCATGGTGT+TGG | + | chr1.4:29428130-29428149 | MS.gene053459:CDS | 50.0% | |
| GGATGAGAAGGAATACGAGG+AGG | + | chr1.4:29427600-29427619 | MS.gene053459:intron | 50.0% | |
| GGCAAGGAAGTTGTCAACAC+AGG | - | chr1.4:29426818-29426837 | None:intergenic | 50.0% | |
| GTACGGTGGGATTCCAAATG+TGG | + | chr1.4:29428186-29428205 | MS.gene053459:CDS | 50.0% | |
| TACGAGCGTGTTGAAGGACA+TGG | + | chr1.4:29428387-29428406 | MS.gene053459:CDS | 50.0% | |
| TTCACGCTCAAATCCAGGCA+AGG | - | chr1.4:29426834-29426853 | None:intergenic | 50.0% | |
| TTTGGGCAGATTCTGCAAGC+AGG | + | chr1.4:29426120-29426139 | MS.gene053459:intron | 50.0% | |
| ! | GTGTTGACAACTTCCTTGCC+TGG | + | chr1.4:29426818-29426837 | MS.gene053459:CDS | 50.0% |
| ! | TGTGATGGAAGGATGTCTGC+TGG | - | chr1.4:29428238-29428257 | None:intergenic | 50.0% |
| ! | TTTGGAATCCCACCGTACAC+AGG | - | chr1.4:29428184-29428203 | None:intergenic | 50.0% |
| !! | CAAGGCATCGCCTTTGTTCA+TGG | + | chr1.4:29426414-29426433 | MS.gene053459:intron | 50.0% |
| ATGCAGCGGTAAGTGCCCAT+CGG | - | chr1.4:29427228-29427247 | None:intergenic | 55.0% | |
| CAAAGATGCAGAGGAGGAGG+TGG | + | chr1.4:29427624-29427643 | MS.gene053459:intron | 55.0% | |
| CCACCGTACACAGGAAAAGC+GGG | - | chr1.4:29428175-29428194 | None:intergenic | 55.0% | |
| CCCACCGTACACAGGAAAAG+CGG | - | chr1.4:29428176-29428195 | None:intergenic | 55.0% | |
| CGAGGAGGACAAAGATGCAG+AGG | + | chr1.4:29427615-29427634 | MS.gene053459:intron | 55.0% | |
| GATGGAAGGATGTCTGCTGG+AGG | - | chr1.4:29428235-29428254 | None:intergenic | 55.0% | |
| GGACAAAGATGCAGAGGAGG+AGG | + | chr1.4:29427621-29427640 | MS.gene053459:intron | 55.0% | |
| GGAGGACAAAGATGCAGAGG+AGG | + | chr1.4:29427618-29427637 | MS.gene053459:intron | 55.0% | |
| GGTGGGATTCCAAATGTGGG+TGG | + | chr1.4:29428190-29428209 | MS.gene053459:CDS | 55.0% | |
| GTCACTCACCATGCTGAGGT+TGG | + | chr1.4:29426926-29426945 | MS.gene053459:CDS | 55.0% | |
| !! | CCGCTTTTCCTGTGTACGGT+GGG | + | chr1.4:29428173-29428192 | MS.gene053459:CDS | 55.0% |
| AGATGCAGAGGAGGAGGTGG+AGG | + | chr1.4:29427627-29427646 | MS.gene053459:intron | 60.0% | |
| !! | CCCGCTTTTCCTGTGTACGG+TGG | + | chr1.4:29428172-29428191 | MS.gene053459:CDS | 60.0% |
| AGAGGAGGAGGTGGAGGAGG+AGG | + | chr1.4:29427633-29427652 | MS.gene053459:intron | 65.0% | |
| CAGCGGTAAGTGCCCATCGG+CGG | - | chr1.4:29427225-29427244 | None:intergenic | 65.0% | |
| TGCAGAGGAGGAGGTGGAGG+AGG | + | chr1.4:29427630-29427649 | MS.gene053459:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 29425351 | 29428447 | 29425351 | ID=MS.gene053459 |
| chr1.4 | mRNA | 29425351 | 29428447 | 29425351 | ID=MS.gene053459.t1;Parent=MS.gene053459 |
| chr1.4 | exon | 29425351 | 29426105 | 29425351 | ID=MS.gene053459.t1.exon1;Parent=MS.gene053459.t1 |
| chr1.4 | CDS | 29425351 | 29426105 | 29425351 | ID=cds.MS.gene053459.t1;Parent=MS.gene053459.t1 |
| chr1.4 | exon | 29426754 | 29427459 | 29426754 | ID=MS.gene053459.t1.exon2;Parent=MS.gene053459.t1 |
| chr1.4 | CDS | 29426754 | 29427459 | 29426754 | ID=cds.MS.gene053459.t1;Parent=MS.gene053459.t1 |
| chr1.4 | exon | 29427789 | 29428007 | 29427789 | ID=MS.gene053459.t1.exon3;Parent=MS.gene053459.t1 |
| chr1.4 | CDS | 29427789 | 29428007 | 29427789 | ID=cds.MS.gene053459.t1;Parent=MS.gene053459.t1 |
| chr1.4 | exon | 29428109 | 29428294 | 29428109 | ID=MS.gene053459.t1.exon4;Parent=MS.gene053459.t1 |
| chr1.4 | CDS | 29428109 | 29428294 | 29428109 | ID=cds.MS.gene053459.t1;Parent=MS.gene053459.t1 |
| chr1.4 | exon | 29428385 | 29428447 | 29428385 | ID=MS.gene053459.t1.exon5;Parent=MS.gene053459.t1 |
| chr1.4 | CDS | 29428385 | 29428447 | 29428385 | ID=cds.MS.gene053459.t1;Parent=MS.gene053459.t1 |
| Gene Sequence |
| Protein sequence |
