AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053531

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053531.t1 MTR_4g085700 91.475 305 22 2 1 301 1 305 0.0 520
MS.gene053531.t1 MTR_4g085660 87.869 305 32 3 1 301 1 304 3.07e-178 494
MS.gene053531.t1 MTR_4g081980 44.000 300 131 7 1 296 1 267 6.33e-56 182
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053531.t1 AT1G49770 43.519 216 84 5 88 275 70 275 2.68e-41 145

Find 62 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATTGATTCCTTCTTTC+TGG 0.014189 4.3:+27056224 None:intergenic
GCTTCCTGAACTTCCTTCTA+AGG 0.247562 4.3:-27056020 MS.gene053531:intron
CCTAAGTTATGATTAGAGTT+TGG 0.258500 4.3:+27056283 None:intergenic
GAATGCTTCCCTTGATTCAT+AGG 0.298456 4.3:+27054657 None:intergenic
TGGAAACTTCTACATGATTA+TGG 0.312756 4.3:-27054374 MS.gene053531:CDS
CTAAGTTATGATTAGAGTTT+GGG 0.313394 4.3:+27056284 None:intergenic
AAATGAATTTATACCTTAGA+AGG 0.315805 4.3:+27056007 None:intergenic
ATTCCTTCTTTCTGGTTCAA+TGG 0.328467 4.3:+27056232 None:intergenic
ATGTTCAAACAAATTTCATT+TGG 0.345668 4.3:-27056330 MS.gene053531:CDS
TGTTCAAACAAATTTCATTT+GGG 0.373120 4.3:-27056329 MS.gene053531:CDS
TATACCTTAGAAGGAAGTTC+AGG 0.398193 4.3:+27056016 None:intergenic
TCTCTTGACCACAATTGCTT+TGG 0.400979 4.3:-27054452 MS.gene053531:CDS
GACCACAATTGCTTTGGTGC+TGG 0.421423 4.3:-27054446 MS.gene053531:CDS
CCGATTTCTCTTCTTGCTCA+CGG 0.425778 4.3:+27056192 None:intergenic
CCGTGAGCAAGAAGAGAAAT+CGG 0.430632 4.3:-27056192 MS.gene053531:CDS
CGATTTCTCTTCTTGCTCAC+GGG 0.436559 4.3:+27056193 None:intergenic
AACATTATGTGCAATGCAAA+TGG 0.441341 4.3:-27054394 MS.gene053531:CDS
AGTGAGAATAATATTGCAAC+TGG 0.447083 4.3:-27056151 MS.gene053531:CDS
CTCAAATCTGTATCCCCACT+TGG 0.456632 4.3:-27054715 MS.gene053531:CDS
GAGAAAGGAGAAAGAAAATG+AGG 0.462906 4.3:-27056069 MS.gene053531:CDS
CGTGAGCAAGAAGAGAAATC+GGG 0.482173 4.3:-27056191 MS.gene053531:CDS
AGGTGAGAGTAGCAAACAAT+TGG 0.494891 4.3:-27056263 MS.gene053531:CDS
CTCCAGCACCAAAGCAATTG+TGG 0.505022 4.3:+27054444 None:intergenic
ATTTGCATTGCACATAATGT+TGG 0.516349 4.3:+27054396 None:intergenic
CCAAACTCTAATCATAACTT+AGG 0.519326 4.3:-27056283 MS.gene053531:CDS
AATGCTTCCCTTGATTCATA+GGG 0.521692 4.3:+27054658 None:intergenic
TCATTTGGGAAAATCATCCA+TGG 0.525272 4.3:-27056315 MS.gene053531:CDS
CAGAAAGAAGGAATCAATGA+AGG 0.527899 4.3:-27056223 MS.gene053531:CDS
AAACCTACATGTTGTGGTGG+AGG 0.530627 4.3:+27054559 None:intergenic
AGTGGCATCCCTATGAATCA+AGG 0.535671 4.3:-27054666 MS.gene053531:CDS
CATTTGGGAAAATCATCCAT+GGG 0.537456 4.3:-27056314 MS.gene053531:CDS
ATTTGTGCAACTAAGAAGCC+TGG 0.543272 4.3:-27054475 MS.gene053531:CDS
CAGGCAAAACAAGCTTCACA+TGG 0.544546 4.3:-27054224 MS.gene053531:CDS
CAAGAAGAGAAATCGGGGTG+GGG 0.550377 4.3:-27056185 MS.gene053531:CDS
GAAGCATTCTTAGCTGATCA+AGG 0.551542 4.3:-27054643 MS.gene053531:CDS
GTTCAGGAAGCAAGGCATGA+AGG 0.554482 4.3:+27056032 None:intergenic
AGAAGGAAGTTCAGGAAGCA+AGG 0.555351 4.3:+27056024 None:intergenic
ACATATTGACTGAAAGAGAA+AGG 0.558067 4.3:-27056084 MS.gene053531:CDS
GTGCTGGAGAAACATAAGAT+TGG 0.566015 4.3:-27054430 MS.gene053531:CDS
AAACCATTGAACCAGAAAGA+AGG 0.568529 4.3:-27056235 MS.gene053531:CDS
GCAATTGTGGTCAAGAGACC+AGG 0.573021 4.3:+27054457 None:intergenic
GCAAGAAGAGAAATCGGGGT+GGG 0.581863 4.3:-27056186 MS.gene053531:CDS
CAAGTTATTATTATAACTTG+AGG 0.582073 4.3:+27054618 None:intergenic
TTGATCATGATCTACACTCA+TGG 0.585566 4.3:+27056354 None:intergenic
TTCACATGGCGCAAACTCGA+TGG 0.594689 4.3:-27054210 MS.gene053531:CDS
TTACCTCCACCACAACATGT+AGG 0.611747 4.3:-27054562 MS.gene053531:CDS
CTTCACTGCTGCATCCACAA+TGG 0.612064 4.3:+27054795 None:intergenic
CAGATGACTCACTCCCAAGT+GGG 0.612302 4.3:+27054701 None:intergenic
GTGGCATCCCTATGAATCAA+GGG 0.614055 4.3:-27054665 MS.gene053531:CDS
TCAAATCTGTATCCCCACTT+GGG 0.618216 4.3:-27054714 MS.gene053531:CDS
GGCTGATAAATCAACCATTG+TGG 0.629857 4.3:-27054809 MS.gene053531:CDS
ACATGGCGCAAACTCGATGG+AGG 0.652836 4.3:-27054207 MS.gene053531:CDS
TTAAAACCTACATGTTGTGG+TGG 0.654855 4.3:+27054556 None:intergenic
AATGTTGTACTGAACATATG+TGG 0.655921 4.3:-27054517 MS.gene053531:CDS
CAGCTTTAGAAGTTATGACG+CGG 0.659283 4.3:-27054169 MS.gene053531:CDS
GAGTTTGGGAGATCATCCCA+TGG 0.666665 4.3:+27056298 None:intergenic
ACAGATGACTCACTCCCAAG+TGG 0.674383 4.3:+27054700 None:intergenic
AGATGACTCACTCCCAAGTG+GGG 0.684740 4.3:+27054702 None:intergenic
GTGAGCAAGAAGAGAAATCG+GGG 0.694598 4.3:-27056190 MS.gene053531:CDS
AGCAAGAAGAGAAATCGGGG+TGG 0.706863 4.3:-27056187 MS.gene053531:CDS
CATCTGTAATCAACTCACAG+TGG 0.763842 4.3:-27054684 MS.gene053531:CDS
GTTGTACTGAACATATGTGG+TGG 0.767818 4.3:-27054514 MS.gene053531:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAGTTCAATAATCA+AGG + chr4.3:27054994-27055013 None:intergenic 15.0%
!! GATATTAAAAAATGATAAAG+AGG + chr4.3:27056195-27056214 None:intergenic 15.0%
!! TAAAAATCTTGAAGAAATTA+AGG - chr4.3:27055751-27055770 MS.gene053531:intron 15.0%
!! TGATAGTATTCATTTATTTA+GGG - chr4.3:27055370-27055389 MS.gene053531:intron 15.0%
!!! ACTGAAATAAATAATTTTCT+TGG - chr4.3:27055572-27055591 MS.gene053531:intron 15.0%
!!! ATGATTTTGATAAACTTTAA+GGG + chr4.3:27054617-27054636 None:intergenic 15.0%
!!! ATTTGATTTTGATATTTTAC+AGG - chr4.3:27055688-27055707 MS.gene053531:intron 15.0%
!!! TATGATTTTGATAAACTTTA+AGG + chr4.3:27054618-27054637 None:intergenic 15.0%
!!! TTGATAGTATTCATTTATTT+AGG - chr4.3:27055369-27055388 MS.gene053531:intron 15.0%
!! AAATGAATTTATACCTTAGA+AGG + chr4.3:27054514-27054533 None:intergenic 20.0%
!! ATGTTCAAACAAATTTCATT+TGG - chr4.3:27054188-27054207 MS.gene053531:CDS 20.0%
!! CAAGTTATTATTATAACTTG+AGG + chr4.3:27055903-27055922 None:intergenic 20.0%
!! CTACAATTACTTATTTACTA+AGG - chr4.3:27055655-27055674 MS.gene053531:intron 20.0%
!! GCAAATACAAAAATGTATTT+AGG - chr4.3:27054679-27054698 MS.gene053531:CDS 20.0%
!! TGGACACAATAAAAAAAAAA+TGG - chr4.3:27055292-27055311 MS.gene053531:intron 20.0%
!! TGTTCAAACAAATTTCATTT+GGG - chr4.3:27054189-27054208 MS.gene053531:CDS 20.0%
!!! GAAATAAATAATTTTCTTGG+AGG - chr4.3:27055575-27055594 MS.gene053531:intron 20.0%
!!! TGATTTTGATAAACTTTAAG+GGG + chr4.3:27054616-27054635 None:intergenic 20.0%
! AAAATTTAAGTCAATGGCAT+TGG - chr4.3:27055522-27055541 MS.gene053531:intron 25.0%
! CAATTGTCAGTTAAATCTTA+CGG - chr4.3:27055241-27055260 MS.gene053531:intron 25.0%
! CCTAAGAAAATTTAAGTCAA+TGG - chr4.3:27055516-27055535 MS.gene053531:intron 25.0%
! CTAAGTTATGATTAGAGTTT+GGG + chr4.3:27054237-27054256 None:intergenic 25.0%
! TCATATTGTAACTCAATTGT+TGG + chr4.3:27055205-27055224 None:intergenic 25.0%
!! CATTTTTGTATTTGCCAAAT+CGG + chr4.3:27054674-27054693 None:intergenic 25.0%
!! TTTCTATATCTTTTCCGATT+TGG - chr4.3:27054657-27054676 MS.gene053531:CDS 25.0%
!!! AACATGTAGGTTTTAAAACA+TGG - chr4.3:27055969-27055988 MS.gene053531:intron 25.0%
!!! CCATTGACTTAAATTTTCTT+AGG + chr4.3:27055519-27055538 None:intergenic 25.0%
!!! CTTTTCAAGTGAGAATATAA+TGG + chr4.3:27055318-27055337 None:intergenic 25.0%
AAAATGATAAAGAGGAGAGA+AGG + chr4.3:27056187-27056206 None:intergenic 30.0%
AAACAACACTCATATAAGCT+AGG - chr4.3:27054775-27054794 MS.gene053531:CDS 30.0%
AAATAAAGACTTCAAGTCCA+TGG + chr4.3:27055416-27055435 None:intergenic 30.0%
AACAACACTCATATAAGCTA+GGG - chr4.3:27054776-27054795 MS.gene053531:CDS 30.0%
AACATTATGTGCAATGCAAA+TGG - chr4.3:27056124-27056143 MS.gene053531:CDS 30.0%
AATAAAGACTTCAAGTCCAT+GGG + chr4.3:27055415-27055434 None:intergenic 30.0%
AATGTTGTACTGAACATATG+TGG - chr4.3:27056001-27056020 MS.gene053531:intron 30.0%
ACCAAACAATTGAACTTAAG+TGG + chr4.3:27055148-27055167 None:intergenic 30.0%
ACCACTTAAGTTCAATTGTT+TGG - chr4.3:27055144-27055163 MS.gene053531:intron 30.0%
AGTGAGAATAATATTGCAAC+TGG - chr4.3:27054367-27054386 MS.gene053531:intron 30.0%
ATTTGCATTGCACATAATGT+TGG + chr4.3:27056125-27056144 None:intergenic 30.0%
CCAAACTCTAATCATAACTT+AGG - chr4.3:27054235-27054254 MS.gene053531:intron 30.0%
CCTAAGTTATGATTAGAGTT+TGG + chr4.3:27054238-27054257 None:intergenic 30.0%
GTGGTTAATGAATTTCACAA+AGG + chr4.3:27055129-27055148 None:intergenic 30.0%
TAGTTAAAGAGATTAGAGAG+TGG - chr4.3:27055272-27055291 MS.gene053531:intron 30.0%
TCCAAGTTTGACATTGTATA+CGG + chr4.3:27054940-27054959 None:intergenic 30.0%
TGGAAACTTCTACATGATTA+TGG - chr4.3:27056144-27056163 MS.gene053531:CDS 30.0%
! ACATATTGACTGAAAGAGAA+AGG - chr4.3:27054434-27054453 MS.gene053531:CDS 30.0%
! AGAAGGTTTGAAACTTACAT+GGG + chr4.3:27056170-27056189 None:intergenic 30.0%
! GATAAACTTTAAGGGGAAAA+AGG + chr4.3:27054609-27054628 None:intergenic 30.0%
!!! GTTTTAAAACCTACATGTTG+TGG + chr4.3:27055968-27055987 None:intergenic 30.0%
!!! TTGAATTGTGTTGATTTTGC+AGG - chr4.3:27056275-27056294 MS.gene053531:CDS 30.0%
!!! TTTTTTTAGCCTGATCAAGA+AGG + chr4.3:27054748-27054767 None:intergenic 30.0%
AAAATCGATCCATTCAGGAA+TGG - chr4.3:27055077-27055096 MS.gene053531:intron 35.0%
AAACCATTGAACCAGAAAGA+AGG - chr4.3:27054283-27054302 MS.gene053531:intron 35.0%
AATGCTTCCCTTGATTCATA+GGG + chr4.3:27055863-27055882 None:intergenic 35.0%
ATCTAGCTAGGGTTCTTAAA+GGG - chr4.3:27054851-27054870 MS.gene053531:intron 35.0%
CAGAAAGAAGGAATCAATGA+AGG - chr4.3:27054295-27054314 MS.gene053531:intron 35.0%
CATTTGGGAAAATCATCCAT+GGG - chr4.3:27054204-27054223 MS.gene053531:CDS 35.0%
CCAAGTTTGACATTGTATAC+GGG + chr4.3:27054939-27054958 None:intergenic 35.0%
CCTTCTTGTTACCATAGATA+GGG - chr4.3:27054907-27054926 MS.gene053531:intron 35.0%
GAGAAAGGAGAAAGAAAATG+AGG - chr4.3:27054449-27054468 MS.gene053531:CDS 35.0%
TACCAAAAATCGATCCATTC+AGG - chr4.3:27055072-27055091 MS.gene053531:intron 35.0%
TATACCTTAGAAGGAAGTTC+AGG + chr4.3:27054505-27054524 None:intergenic 35.0%
TCAGTTAAATCTTACGGTTG+AGG - chr4.3:27055247-27055266 MS.gene053531:intron 35.0%
TCATTTGGGAAAATCATCCA+TGG - chr4.3:27054203-27054222 MS.gene053531:CDS 35.0%
TCCTTCTTGTTACCATAGAT+AGG - chr4.3:27054906-27054925 MS.gene053531:intron 35.0%
TGAATTTCACAAAGGACGAA+TGG + chr4.3:27055121-27055140 None:intergenic 35.0%
TTAAAACCTACATGTTGTGG+TGG + chr4.3:27055965-27055984 None:intergenic 35.0%
TTGATCATGATCTACACTCA+TGG + chr4.3:27054167-27054186 None:intergenic 35.0%
TTTAAGAACCCTAGCTAGAT+GGG + chr4.3:27054851-27054870 None:intergenic 35.0%
! ATTTAAGTCAATGGCATTGG+TGG - chr4.3:27055525-27055544 MS.gene053531:intron 35.0%
! GAGAAGGTTTGAAACTTACA+TGG + chr4.3:27056171-27056190 None:intergenic 35.0%
! TTTTTGTGTCAACCTCAGTT+CGG - chr4.3:27055030-27055049 MS.gene053531:intron 35.0%
!! ATTCCTTCTTTCTGGTTCAA+TGG + chr4.3:27054289-27054308 None:intergenic 35.0%
!! CTTCATTGATTCCTTCTTTC+TGG + chr4.3:27054297-27054316 None:intergenic 35.0%
!! TTCCTGAATGGATCGATTTT+TGG + chr4.3:27055077-27055096 None:intergenic 35.0%
AAAGGGGCAATAGATCTACT+AGG - chr4.3:27054868-27054887 MS.gene053531:intron 40.0%
AAGGGGCAATAGATCTACTA+GGG - chr4.3:27054869-27054888 MS.gene053531:intron 40.0%
ACCTGAATTCCATTCCTGAA+TGG + chr4.3:27055089-27055108 None:intergenic 40.0%
AGGTGAGAGTAGCAAACAAT+TGG - chr4.3:27054255-27054274 MS.gene053531:intron 40.0%
ATTTGTGCAACTAAGAAGCC+TGG - chr4.3:27056043-27056062 MS.gene053531:CDS 40.0%
CATCTAGCTAGGGTTCTTAA+AGG - chr4.3:27054850-27054869 MS.gene053531:intron 40.0%
CATCTGTAATCAACTCACAG+TGG - chr4.3:27055834-27055853 MS.gene053531:intron 40.0%
CCCGTATACAATGTCAAACT+TGG - chr4.3:27054936-27054955 MS.gene053531:intron 40.0%
CCCTATCTATGGTAACAAGA+AGG + chr4.3:27054910-27054929 None:intergenic 40.0%
GAACTTTCTCCTTCTTGATC+AGG - chr4.3:27054736-27054755 MS.gene053531:CDS 40.0%
GAATGCTTCCCTTGATTCAT+AGG + chr4.3:27055864-27055883 None:intergenic 40.0%
GGCTGATAAATCAACCATTG+TGG - chr4.3:27055709-27055728 MS.gene053531:intron 40.0%
GTGCTGGAGAAACATAAGAT+TGG - chr4.3:27056088-27056107 MS.gene053531:CDS 40.0%
GTTGTACTGAACATATGTGG+TGG - chr4.3:27056004-27056023 MS.gene053531:intron 40.0%
TCAAATCTGTATCCCCACTT+GGG - chr4.3:27055804-27055823 MS.gene053531:intron 40.0%
TCCATTCAGGAATGGAATTC+AGG - chr4.3:27055085-27055104 MS.gene053531:intron 40.0%
TCTAGCTAGGGTTCTTAAAG+GGG - chr4.3:27054852-27054871 MS.gene053531:intron 40.0%
TCTCTTGACCACAATTGCTT+TGG - chr4.3:27056066-27056085 MS.gene053531:CDS 40.0%
TGTTACCATAGATAGGGATC+TGG - chr4.3:27054913-27054932 MS.gene053531:intron 40.0%
TTAAGAACCCTAGCTAGATG+GGG + chr4.3:27054850-27054869 None:intergenic 40.0%
! CTTTAAGAACCCTAGCTAGA+TGG + chr4.3:27054852-27054871 None:intergenic 40.0%
! GAAGCATTCTTAGCTGATCA+AGG - chr4.3:27055875-27055894 MS.gene053531:intron 40.0%
!! CAGCTTTAGAAGTTATGACG+CGG - chr4.3:27056349-27056368 MS.gene053531:CDS 40.0%
AAACCTACATGTTGTGGTGG+AGG + chr4.3:27055962-27055981 None:intergenic 45.0%
AAGACTTCAAGTCCATGGGT+TGG + chr4.3:27055411-27055430 None:intergenic 45.0%
ACAGTATTAGAGCCAACCCA+TGG - chr4.3:27055396-27055415 MS.gene053531:intron 45.0%
AGAAGGAAGTTCAGGAAGCA+AGG + chr4.3:27054497-27054516 None:intergenic 45.0%
AGTGGCATCCCTATGAATCA+AGG - chr4.3:27055852-27055871 MS.gene053531:intron 45.0%
CAGGCAAAACAAGCTTCACA+TGG - chr4.3:27056294-27056313 MS.gene053531:CDS 45.0%
CCGATTTCTCTTCTTGCTCA+CGG + chr4.3:27054329-27054348 None:intergenic 45.0%
CCGTGAGCAAGAAGAGAAAT+CGG - chr4.3:27054326-27054345 MS.gene053531:intron 45.0%
CGATTTCTCTTCTTGCTCAC+GGG + chr4.3:27054328-27054347 None:intergenic 45.0%
CGTGAGCAAGAAGAGAAATC+GGG - chr4.3:27054327-27054346 MS.gene053531:intron 45.0%
CTCAAATCTGTATCCCCACT+TGG - chr4.3:27055803-27055822 MS.gene053531:intron 45.0%
GCTTCCTGAACTTCCTTCTA+AGG - chr4.3:27054498-27054517 MS.gene053531:CDS 45.0%
GTGAGCAAGAAGAGAAATCG+GGG - chr4.3:27054328-27054347 MS.gene053531:intron 45.0%
GTGGCATCCCTATGAATCAA+GGG - chr4.3:27055853-27055872 MS.gene053531:intron 45.0%
TAAAAGCCCCCATCTAGCTA+GGG - chr4.3:27054840-27054859 MS.gene053531:intron 45.0%
TAAGAACCCTAGCTAGATGG+GGG + chr4.3:27054849-27054868 None:intergenic 45.0%
TTAAAAGCCCCCATCTAGCT+AGG - chr4.3:27054839-27054858 MS.gene053531:intron 45.0%
TTACCTCCACCACAACATGT+AGG - chr4.3:27055956-27055975 MS.gene053531:intron 45.0%
! TAGCTAGATGGGGGCTTTTA+AGG + chr4.3:27054840-27054859 None:intergenic 45.0%
ACAGATGACTCACTCCCAAG+TGG + chr4.3:27055821-27055840 None:intergenic 50.0%
AGATGACTCACTCCCAAGTG+GGG + chr4.3:27055819-27055838 None:intergenic 50.0%
AGCAAGAAGAGAAATCGGGG+TGG - chr4.3:27054331-27054350 MS.gene053531:intron 50.0%
CAAGAAGAGAAATCGGGGTG+GGG - chr4.3:27054333-27054352 MS.gene053531:intron 50.0%
CAGATGACTCACTCCCAAGT+GGG + chr4.3:27055820-27055839 None:intergenic 50.0%
CTCCAGCACCAAAGCAATTG+TGG + chr4.3:27056077-27056096 None:intergenic 50.0%
CTTACTTCACGACCGAACTG+AGG + chr4.3:27055045-27055064 None:intergenic 50.0%
CTTCACTGCTGCATCCACAA+TGG + chr4.3:27055726-27055745 None:intergenic 50.0%
GAGTTTGGGAGATCATCCCA+TGG + chr4.3:27054223-27054242 None:intergenic 50.0%
GCAAGAAGAGAAATCGGGGT+GGG - chr4.3:27054332-27054351 MS.gene053531:intron 50.0%
GCAATTGTGGTCAAGAGACC+AGG + chr4.3:27056064-27056083 None:intergenic 50.0%
GTTCAGGAAGCAAGGCATGA+AGG + chr4.3:27054489-27054508 None:intergenic 50.0%
TTCACATGGCGCAAACTCGA+TGG - chr4.3:27056308-27056327 MS.gene053531:CDS 50.0%
! GACCACAATTGCTTTGGTGC+TGG - chr4.3:27056072-27056091 MS.gene053531:CDS 50.0%
ACATGGCGCAAACTCGATGG+AGG - chr4.3:27056311-27056330 MS.gene053531:CDS 55.0%
ACGGGCCAGATCCCTATCTA+TGG + chr4.3:27054921-27054940 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 27054160 27056380 27054160 ID=MS.gene053531
chr4.3 mRNA 27054160 27056380 27054160 ID=MS.gene053531.t1;Parent=MS.gene053531
chr4.3 exon 27056021 27056380 27056021 ID=MS.gene053531.t1.exon1;Parent=MS.gene053531.t1
chr4.3 CDS 27056021 27056380 27056021 ID=cds.MS.gene053531.t1;Parent=MS.gene053531.t1
chr4.3 exon 27054369 27054830 27054369 ID=MS.gene053531.t1.exon2;Parent=MS.gene053531.t1
chr4.3 CDS 27054369 27054830 27054369 ID=cds.MS.gene053531.t1;Parent=MS.gene053531.t1
chr4.3 exon 27054160 27054243 27054160 ID=MS.gene053531.t1.exon3;Parent=MS.gene053531.t1
chr4.3 CDS 27054160 27054243 27054160 ID=cds.MS.gene053531.t1;Parent=MS.gene053531.t1
Gene Sequence

>MS.gene053531

ATGGCCATGAGTGTAGATCATGATCAAGATGTTCAAACAAATTTCATTTGGGAAAATCATCCATGGGATGATCTCCCAAACTCTAATCATAACTTAGGTGAGAGTAGCAAACAATTGGACACAAAACCATTGAACCAGAAAGAAGGAATCAATGAAGGAGAAGCTCCCGTGAGCAAGAAGAGAAATCGGGGTGGGGTTGTAATTAGAAGTGAGAATAATATTGCAACTGGTGAAGAAAAAGATAAAAAGTATCGTGATTTTGATCATGAAATGCACATATTGACTGAAAGAGAAAGGAGAAAGAAAATGAGGAACATGTTCGATAGCCTTCATGCCTTGCTTCCTGAACTTCCTTCTAAGGTATAAATTCATTTTTATCTTCAATCATTTCAAAGATAATACTTGCATGATCATAATAATTTTAATCGCTTGAAAATCAAGTATTTCCTTTTTCCCCTTAAAGTTTATCAAAATCATATATGTCATGTTTCTTATCTTTTCTATATCTTTTCCGATTTGGCAAATACAAAAATGTATTTAGGACACAAACATCTCTATTTTCTCACTATACTATTTGAACTTTCTCCTTCTTGATCAGGCTAAAAAAAATAATAAAAACAACACTCATATAAGCTAGGGTAACAACAAAAGATGTATTTTTCGTTCTTGATCACGATCCTTAAAAGCCCCCATCTAGCTAGGGTTCTTAAAGGGGCAATAGATCTACTAGGGTTCTTAAAATTTGATCCTTCTTGTTACCATAGATAGGGATCTGGCCCGTATACAATGTCAAACTTGGATCGTTTACTATGATTAGTATCTTTGATTGCACCTTGATTATTGAACTAATTAATCTAAAATTCAATTTTCTTTTTGTGTCAACCTCAGTTCGGTCGTGAAGTAAGTATAATTTACCAAAAATCGATCCATTCAGGAATGGAATTCAGGTTCTTCTGAACCATTCGTCCTTTGTGAAATTCATTAACCACTTAAGTTCAATTGTTTGGTTAATCTAAAACTCAATCTTAATCGTGAGATTAATCCAACAATTGAGTTACAATATGAGATAATACATTCATCTCAATTGTCAGTTAAATCTTACGGTTGAGGTGTAGTTAAAGAGATTAGAGAGTGGACACAATAAAAAAAAAATGGCCATTATATTCTCACTTGAAAAGAGAAAATAATTTTATTTTAATTAGACATTGTTTGATAGTATTCATTTATTTAGGGCACACAGTATTAGAGCCAACCCATGGACTTGAAGTCTTTATTTTAATTTTTAATTTTTTTATTAATAATAATCAATATAATTATAATTGATAATAATAATAATAATAATATTTTTTATTGCTACCTAAGAAAATTTAAGTCAATGGCATTGGTGGAAAATTTGATTAGTGATTTAAAACACTGAAATAAATAATTTTCTTGGAGGAATTTTTCATGTGATAATTATAATTATCAATATACAAATGATTATATTCTAGTAAAACTACAATTACTTATTTACTAAGGAAGATGTTTAATTTGATTTTGATATTTTACAGGCTGATAAATCAACCATTGTGGATGCAGCAGTGAAGCACATTAAAAATCTTGAAGAAATTAAGGAAAAGCTAGAAAAGAAGAAGCAAGAAAGACTCAAATCTGTATCCCCACTTGGGAGTGAGTCATCTGTAATCAACTCACAGTGGCATCCCTATGAATCAAGGGAAGCATTCTTAGCTGATCAAGGATCCTCAAGTTATAATAATAACTTGTCTAGCGCAATTGTAACTTCAAATGCATTTTCATTACCTCCACCACAACATGTAGGTTTTAAAACATGGTCTTCTCAAAATGTTGTACTGAACATATGTGGTGGTGAAGCACAATTTTGCATTTGTGCAACTAAGAAGCCTGGTCTCTTGACCACAATTGCTTTGGTGCTGGAGAAACATAAGATTGGTGTTATTTCTGCCAACATTATGTGCAATGCAAATGGAAACTTCTACATGATTATGGCCCATGTAAGTTTCAAACCTTCTCTCCTCTTTATCATTTTTTAATATCAACACATTTTTAATATTATGTAATGCATTTTCTTGAGTAGTACGAGTGTGAACAACTCAATTGAATTGTGTTGATTTTGCAGGCAAAACAAGCTTCACATGGCGCAAACTCGATGGAGGAAACTTACAAGCAAGCAGCTTTAGAAGTTATGACGCGGATCGCTTAA
Protein sequence

>MS.gene053531.t1

MAMSVDHDQDVQTNFIWENHPWDDLPNSNHNLGESSKQLDTKPLNQKEGINEGEAPVSKKRNRGGVVIRSENNIATGEEKDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKADKSTIVDAAVKHIKNLEEIKEKLEKKKQERLKSVSPLGSESSVINSQWHPYESREAFLADQGSSSYNNNLSSAIVTSNAFSLPPPQHVGFKTWSSQNVVLNICGGEAQFCICATKKPGLLTTIALVLEKHKIGVISANIMCNANGNFYMIMAHAKQASHGANSMEETYKQAALEVMTRIA