Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053587.t1 | XP_003608402.1 | 93.7 | 334 | 20 | 1 | 1 | 333 | 1 | 334 | 4.10E-172 | 614 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053587.t1 | Q8H1G0 | 58.5 | 188 | 70 | 3 | 40 | 220 | 80 | 266 | 2.1e-44 | 181.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053587.t1 | G7JV51 | 93.7 | 334 | 20 | 1 | 1 | 333 | 1 | 334 | 3.0e-172 | 614.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053587.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053587.t1 | MTR_4g093730 | 93.713 | 334 | 20 | 1 | 1 | 333 | 1 | 334 | 0.0 | 649 |
| MS.gene053587.t1 | MTR_3g100040 | 46.179 | 301 | 133 | 8 | 40 | 318 | 66 | 359 | 2.42e-74 | 233 |
| MS.gene053587.t1 | MTR_3g100040 | 43.511 | 262 | 119 | 8 | 79 | 318 | 1 | 255 | 1.38e-56 | 184 |
| MS.gene053587.t1 | MTR_3g100050 | 43.333 | 270 | 127 | 7 | 5 | 268 | 33 | 282 | 2.11e-56 | 186 |
| MS.gene053587.t1 | MTR_5g066510 | 55.191 | 183 | 65 | 7 | 43 | 219 | 74 | 245 | 9.89e-56 | 183 |
| MS.gene053587.t1 | MTR_5g066510 | 51.538 | 130 | 49 | 5 | 41 | 164 | 72 | 193 | 3.29e-30 | 114 |
| MS.gene053587.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 1.19e-18 | 85.5 |
| MS.gene053587.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 3.07e-18 | 85.1 |
| MS.gene053587.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 5.71e-18 | 85.1 |
| MS.gene053587.t1 | MTR_3g060200 | 49.038 | 104 | 40 | 6 | 140 | 235 | 11 | 109 | 7.00e-18 | 84.0 |
| MS.gene053587.t1 | MTR_4g008070 | 46.835 | 79 | 35 | 2 | 140 | 211 | 1 | 79 | 1.59e-13 | 66.2 |
| MS.gene053587.t1 | MTR_4g008090 | 47.368 | 76 | 37 | 1 | 62 | 137 | 12 | 84 | 3.05e-13 | 65.9 |
| MS.gene053587.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 389 | 435 | 1.47e-12 | 68.6 |
| MS.gene053587.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 493 | 539 | 1.87e-12 | 68.6 |
| MS.gene053587.t1 | MTR_4g108880 | 64.444 | 45 | 16 | 0 | 104 | 148 | 501 | 545 | 1.02e-11 | 66.2 |
| MS.gene053587.t1 | MTR_8g076340 | 42.105 | 76 | 40 | 2 | 152 | 225 | 193 | 266 | 5.64e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053587.t1 | AT1G51600 | 58.511 | 188 | 70 | 3 | 40 | 220 | 80 | 266 | 2.00e-60 | 196 |
| MS.gene053587.t1 | AT1G51600 | 58.511 | 188 | 70 | 3 | 40 | 220 | 80 | 266 | 2.00e-60 | 196 |
| MS.gene053587.t1 | AT3G21175 | 54.404 | 193 | 74 | 4 | 38 | 220 | 74 | 262 | 4.55e-59 | 192 |
| MS.gene053587.t1 | AT3G21175 | 54.922 | 193 | 71 | 5 | 38 | 220 | 74 | 260 | 4.89e-59 | 192 |
| MS.gene053587.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 1.40e-50 | 171 |
| MS.gene053587.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 1.40e-50 | 171 |
| MS.gene053587.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 1.63e-50 | 171 |
| MS.gene053587.t1 | AT3G21175 | 57.018 | 114 | 46 | 2 | 38 | 151 | 74 | 184 | 5.07e-33 | 122 |
Find 82 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAACTCACATGGATTC+TGG | 0.211139 | 4.4:-21452982 | None:intergenic |
| CAAGCATTGCATAGAGTTCT+TGG | 0.242885 | 4.4:-21453180 | None:intergenic |
| ACCTCTCAGCAAGCTCTTTA+CGG | 0.268811 | 4.4:-21452369 | None:intergenic |
| AGGATTACAGGATAATATTA+TGG | 0.274171 | 4.4:+21455025 | MS.gene053587:intron |
| ACTGAATTTGAGATTCCTTT+AGG | 0.291144 | 4.4:+21455071 | MS.gene053587:CDS |
| CGGGCTAAAGTGGGCAAATA+AGG | 0.299942 | 4.4:+21453203 | MS.gene053587:CDS |
| AGCAAAACTGTCGGGACATT+TGG | 0.300350 | 4.4:+21452134 | MS.gene053587:CDS |
| TCCGTGAAAGCTTTGAATTA+CGG | 0.336575 | 4.4:-21452273 | None:intergenic |
| TTGGCAAAGGCTTTGTTTCA+TGG | 0.339952 | 4.4:-21454194 | None:intergenic |
| GCTGTATTGTTACTCTTAGA+TGG | 0.341296 | 4.4:+21452067 | MS.gene053587:CDS |
| GGAGATCTGCATCACTTGTT+AGG | 0.347795 | 4.4:+21452293 | MS.gene053587:CDS |
| GAACTCTATGCAATGCTTGC+GGG | 0.368924 | 4.4:+21453184 | MS.gene053587:CDS |
| TTGAAACTCACATGGATTCT+GGG | 0.372841 | 4.4:-21452981 | None:intergenic |
| ATTCCAATATGAGGACTTAC+TGG | 0.374469 | 4.4:+21455207 | MS.gene053587:CDS |
| TGGCAAAGGCTTTGTTTCAT+GGG | 0.392126 | 4.4:-21454193 | None:intergenic |
| GCCGGTCCTCGACGCATTAC+CGG | 0.398091 | 4.4:-21453153 | None:intergenic |
| GCAAAACTGTCGGGACATTT+GGG | 0.401442 | 4.4:+21452135 | MS.gene053587:CDS |
| GAACTCACCATTTCCTTTGA+AGG | 0.410545 | 4.4:+21451640 | MS.gene053587:CDS |
| AGATGCCAGCATTGTGGAAT+TGG | 0.421996 | 4.4:+21453117 | MS.gene053587:CDS |
| GCAATGCTTGCGGGCTAAAG+TGG | 0.425495 | 4.4:+21453193 | MS.gene053587:CDS |
| CCCTTCCGTTACGCCAGAAA+AGG | 0.437686 | 4.4:+21451678 | MS.gene053587:CDS |
| AGAAAATTCATGTGCTGCAC+AGG | 0.441655 | 4.4:+21454013 | MS.gene053587:CDS |
| ACCTGCTCAATTATCATCTC+AGG | 0.443550 | 4.4:-21454234 | None:intergenic |
| TATCATCTCAGGTGACTGTC+TGG | 0.447979 | 4.4:-21454223 | None:intergenic |
| CAAGAGCATTATTCTCCACT+TGG | 0.451852 | 4.4:-21454843 | None:intergenic |
| CAGCCAGTAAGTCCTCATAT+TGG | 0.453388 | 4.4:-21455210 | None:intergenic |
| GAGTGGAACAGAAGCGGTAA+TGG | 0.454383 | 4.4:-21451605 | None:intergenic |
| TCCGTAATTCAAAGCTTTCA+CGG | 0.456528 | 4.4:+21452272 | MS.gene053587:CDS |
| ATGCTGAATTCGTCTGAGAA+TGG | 0.460337 | 4.4:+21451520 | MS.gene053587:CDS |
| TGCTGAATTCGTCTGAGAAT+GGG | 0.470907 | 4.4:+21451521 | MS.gene053587:CDS |
| AATAGGATGCAACGGAAGAA+TGG | 0.473196 | 4.4:+21452886 | MS.gene053587:intron |
| GGCAAAGGCTTTGTTTCATG+GGG | 0.473835 | 4.4:-21454192 | None:intergenic |
| AACCTCGCCTTCAAAGGAAA+TGG | 0.478631 | 4.4:-21451647 | None:intergenic |
| CAGTTCTCCTGCTGAAAACC+AGG | 0.478700 | 4.4:+21452936 | MS.gene053587:CDS |
| AGTGGAACAGAAGCGGTAAT+GGG | 0.481649 | 4.4:-21451604 | None:intergenic |
| ATTGTTACTCTTAGATGGGC+AGG | 0.482284 | 4.4:+21452072 | MS.gene053587:CDS |
| ACCTGAGATGATAATTGAGC+AGG | 0.486485 | 4.4:+21454233 | MS.gene053587:CDS |
| TGCTCTTGATCTGCACGAGC+AGG | 0.491928 | 4.4:+21454858 | MS.gene053587:CDS |
| ACAGAAGCGGTAATGGGTTG+AGG | 0.500608 | 4.4:-21451598 | None:intergenic |
| TTGCACCAATTCCACAATGC+TGG | 0.502619 | 4.4:-21453122 | None:intergenic |
| CTGAGAGATCTCGGCAAAGC+AGG | 0.503407 | 4.4:+21453505 | MS.gene053587:CDS |
| GAGTACTGTTGCTAGAATCC+TGG | 0.505753 | 4.4:-21452954 | None:intergenic |
| TTCGGTGCAGCAAAACTGTC+GGG | 0.506228 | 4.4:+21452126 | MS.gene053587:CDS |
| TGGACAGTTTGCATCATTGA+AGG | 0.506543 | 4.4:+21452906 | MS.gene053587:CDS |
| GCTCTTTACGGCAAGTGTAC+CGG | 0.507579 | 4.4:-21452357 | None:intergenic |
| AACATAAACCTCGCCTTCAA+AGG | 0.517160 | 4.4:-21451653 | None:intergenic |
| TCCGGTAATGCGTCGAGGAC+CGG | 0.522308 | 4.4:+21453152 | MS.gene053587:CDS |
| GGTGACTGTCTGGCATCCAT+TGG | 0.523909 | 4.4:-21454213 | None:intergenic |
| CACCATTTCCTTTGAAGGCG+AGG | 0.528900 | 4.4:+21451645 | MS.gene053587:CDS |
| CTGTATTGTTACTCTTAGAT+GGG | 0.529102 | 4.4:+21452068 | MS.gene053587:CDS |
| ACCTGATCATCAAAACCTAA+AGG | 0.529543 | 4.4:-21455086 | None:intergenic |
| TTCGTCTGAGAATGGGTCAA+TGG | 0.534504 | 4.4:+21451528 | MS.gene053587:CDS |
| AGCATTATTCTCCACTTGGA+TGG | 0.538269 | 4.4:-21454839 | None:intergenic |
| AAAGCTTTGAATTACGGAAA+GGG | 0.538823 | 4.4:-21452267 | None:intergenic |
| ATATTGATGATTCCAATATG+AGG | 0.538934 | 4.4:+21455198 | MS.gene053587:CDS |
| CAATGCTTGCGGGCTAAAGT+GGG | 0.548797 | 4.4:+21453194 | MS.gene053587:CDS |
| AGCTACATTGGTACAGTGCA+TGG | 0.556675 | 4.4:-21451551 | None:intergenic |
| CATAGAGTTCTTGGACCAGC+CGG | 0.557209 | 4.4:-21453171 | None:intergenic |
| AAGGGAACACTGAGAGATCT+CGG | 0.561679 | 4.4:+21453496 | MS.gene053587:intron |
| GAAAGCTTTGAATTACGGAA+AGG | 0.561743 | 4.4:-21452268 | None:intergenic |
| TTTCGGTGCAGCAAAACTGT+CGG | 0.562482 | 4.4:+21452125 | MS.gene053587:CDS |
| TGAAACAAAGCCTTTGCCAA+TGG | 0.564941 | 4.4:+21454197 | MS.gene053587:CDS |
| GTCAGAAACGGAAGCTACAT+TGG | 0.567531 | 4.4:-21451563 | None:intergenic |
| ACTCACATGGATTCTGGGAA+AGG | 0.570438 | 4.4:-21452976 | None:intergenic |
| GTAGCTTCCGTTTCTGACGA+AGG | 0.576494 | 4.4:+21451568 | MS.gene053587:CDS |
| GTAATGCGTCGAGGACCGGC+TGG | 0.578356 | 4.4:+21453156 | MS.gene053587:CDS |
| ATTACAGGATAATATTATGG+AGG | 0.581083 | 4.4:+21455028 | MS.gene053587:intron |
| CTGCACCGAAAAGTCAGAAG+TGG | 0.584625 | 4.4:-21452113 | None:intergenic |
| AGAACTCTATGCAATGCTTG+CGG | 0.585395 | 4.4:+21453183 | MS.gene053587:CDS |
| ATGTGCTGCACAGGACAAGA+AGG | 0.588693 | 4.4:+21454022 | MS.gene053587:CDS |
| TGTCTGGCATCCATTGGCAA+AGG | 0.604496 | 4.4:-21454207 | None:intergenic |
| TGATAACTTGTCCATCCAAG+TGG | 0.607711 | 4.4:+21454828 | MS.gene053587:CDS |
| AGTTCACTAGCACGAGAGAG+TGG | 0.611323 | 4.4:-21451622 | None:intergenic |
| GAACGTAGATGCCAGCATTG+TGG | 0.619610 | 4.4:+21453111 | MS.gene053587:CDS |
| GCAAAGGCTTTGTTTCATGG+GGG | 0.623713 | 4.4:-21454191 | None:intergenic |
| ATTCATCTAATAGGATGCAA+CGG | 0.631265 | 4.4:+21452878 | MS.gene053587:intron |
| ACGAGAGAGTGGAACAGAAG+CGG | 0.632477 | 4.4:-21451611 | None:intergenic |
| GAGATCTCGGCAAAGCAGGA+AGG | 0.645047 | 4.4:+21453509 | MS.gene053587:CDS |
| AATTGGTGCAAAGTCTACTC+CGG | 0.650622 | 4.4:+21453134 | MS.gene053587:CDS |
| TGCACCGAAAAGTCAGAAGT+GGG | 0.670616 | 4.4:-21452112 | None:intergenic |
| TCTACTCCGGTAATGCGTCG+AGG | 0.699165 | 4.4:+21453147 | MS.gene053587:CDS |
| GCCGTAAAGAGCTTGCTGAG+AGG | 0.703271 | 4.4:+21452368 | MS.gene053587:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGTATTACTTTTATTTTT+AGG | + | chr4.4:21453974-21453993 | MS.gene053587:intron | 10.0% |
| !!! | CAAAATTTTCAAAATTTATT+TGG | - | chr4.4:21451796-21451815 | None:intergenic | 10.0% |
| !!! | TCTTCTTTTATATTATAAAT+TGG | + | chr4.4:21452468-21452487 | MS.gene053587:intron | 10.0% |
| !! | AAAAGGAAAAAGAAAAAAAA+AGG | - | chr4.4:21452548-21452567 | None:intergenic | 15.0% |
| !! | ATGAAATTAATTCATCTAAT+AGG | + | chr4.4:21452869-21452888 | MS.gene053587:intron | 15.0% |
| !! | TGAATAACATATTATATTCT+TGG | - | chr4.4:21453617-21453636 | None:intergenic | 15.0% |
| !! | TTTAAGCCAAATAATTTAAA+AGG | - | chr4.4:21452565-21452584 | None:intergenic | 15.0% |
| !!! | CTTTTTCCTTTTAAATTATT+TGG | + | chr4.4:21452556-21452575 | MS.gene053587:intron | 15.0% |
| !!! | TTTTATATTATAAATTGGTC+TGG | + | chr4.4:21452473-21452492 | MS.gene053587:intron | 15.0% |
| !!! | TTTTGATCATGTTTATTATT+TGG | + | chr4.4:21451961-21451980 | MS.gene053587:intron | 15.0% |
| !! | AAAATTTATGATGTTTACCA+GGG | + | chr4.4:21452235-21452254 | MS.gene053587:intron | 20.0% |
| !! | AAAGAAATCATACAAAAATG+AGG | - | chr4.4:21453323-21453342 | None:intergenic | 20.0% |
| !! | ACAAAGTAAATGATAGATAA+AGG | - | chr4.4:21455137-21455156 | None:intergenic | 20.0% |
| !! | ATAAGACTGATAAAAGATAA+AGG | - | chr4.4:21454150-21454169 | None:intergenic | 20.0% |
| !! | ATAATTAAGTTTGATATGAC+AGG | - | chr4.4:21454499-21454518 | None:intergenic | 20.0% |
| !! | ATATTACAAATAACCAAGAT+AGG | - | chr4.4:21452713-21452732 | None:intergenic | 20.0% |
| !! | ATGTTCGGATAAAAAAATTT+AGG | - | chr4.4:21454734-21454753 | None:intergenic | 20.0% |
| !! | CAATAAAATGACATTATGTT+CGG | - | chr4.4:21454749-21454768 | None:intergenic | 20.0% |
| !! | CATTTGTTTGAAAGTTAAAA+TGG | + | chr4.4:21453012-21453031 | MS.gene053587:intron | 20.0% |
| !! | TAAAATTTATGATGTTTACC+AGG | + | chr4.4:21452234-21452253 | MS.gene053587:intron | 20.0% |
| !! | TAAGAATTAAGTAAATGAAG+CGG | + | chr4.4:21454522-21454541 | MS.gene053587:intron | 20.0% |
| !! | TAAGACTGATAAAAGATAAA+GGG | - | chr4.4:21454149-21454168 | None:intergenic | 20.0% |
| !! | TAATTAAGTTTGATATGACA+GGG | - | chr4.4:21454498-21454517 | None:intergenic | 20.0% |
| !! | TAGAAAATGTAATTACTACA+TGG | - | chr4.4:21454462-21454481 | None:intergenic | 20.0% |
| !! | TATTTATTTGTTTGTATTCG+TGG | + | chr4.4:21454263-21454282 | MS.gene053587:intron | 20.0% |
| !! | TTTCAAAATAACTCTTCATT+CGG | + | chr4.4:21452165-21452184 | MS.gene053587:intron | 20.0% |
| !! | TTTCAAAATTTATTTGGCTA+TGG | - | chr4.4:21451790-21451809 | None:intergenic | 20.0% |
| !!! | CATGTTTATTATTTGGATTT+TGG | + | chr4.4:21451968-21451987 | MS.gene053587:intron | 20.0% |
| !!! | TGTAGTAATTACATTTTCTA+TGG | + | chr4.4:21454462-21454481 | MS.gene053587:intron | 20.0% |
| !!! | TGTCATTTTATTGAACATTT+TGG | + | chr4.4:21454756-21454775 | MS.gene053587:intron | 20.0% |
| !!! | TTACCTTTTAGTCTTAATAT+TGG | + | chr4.4:21453043-21453062 | MS.gene053587:intron | 20.0% |
| !!! | TTATGAGCTAATTTAAGATT+GGG | + | chr4.4:21452591-21452610 | MS.gene053587:intron | 20.0% |
| ! | AAAAAACTTCAATTGAACGA+TGG | - | chr4.4:21451734-21451753 | None:intergenic | 25.0% |
| ! | AAAAACTTCAATTGAACGAT+GGG | - | chr4.4:21451733-21451752 | None:intergenic | 25.0% |
| ! | AAATTTATGATGTTTACCAG+GGG | + | chr4.4:21452236-21452255 | MS.gene053587:intron | 25.0% |
| ! | ACTCTATGCAATAAAGTTTA+AGG | + | chr4.4:21451837-21451856 | MS.gene053587:intron | 25.0% |
| ! | AGGATTACAGGATAATATTA+TGG | + | chr4.4:21455025-21455044 | MS.gene053587:intron | 25.0% |
| ! | ATTACAGGATAATATTATGG+AGG | + | chr4.4:21455028-21455047 | MS.gene053587:intron | 25.0% |
| ! | GAAATATGATGATATTACAG+AGG | - | chr4.4:21453390-21453409 | None:intergenic | 25.0% |
| ! | TGGATTAAGTTTCAAATAGT+GGG | + | chr4.4:21451861-21451880 | MS.gene053587:intron | 25.0% |
| ! | TGTGAAACAACAATATCAAT+AGG | - | chr4.4:21452445-21452464 | None:intergenic | 25.0% |
| ! | TTGGATTAAGTTTCAAATAG+TGG | + | chr4.4:21451860-21451879 | MS.gene053587:intron | 25.0% |
| !! | AAATGGAAGCATATTTAAAG+AGG | - | chr4.4:21452677-21452696 | None:intergenic | 25.0% |
| !! | AATGGAAGCATATTTAAAGA+GGG | - | chr4.4:21452676-21452695 | None:intergenic | 25.0% |
| !! | ACCATTCTTGTGATTTTTAA+AGG | + | chr4.4:21452001-21452020 | MS.gene053587:intron | 25.0% |
| !! | ATATTGATGATTCCAATATG+AGG | + | chr4.4:21455198-21455217 | MS.gene053587:CDS | 25.0% |
| !! | ATTCTTGGTTACTTTATAAC+AGG | - | chr4.4:21453602-21453621 | None:intergenic | 25.0% |
| !! | CTTATGAGCTAATTTAAGAT+TGG | + | chr4.4:21452590-21452609 | MS.gene053587:intron | 25.0% |
| !! | GTAAAAAAATGAACCTTTTC+TGG | - | chr4.4:21451694-21451713 | None:intergenic | 25.0% |
| !! | TATGCAATAAAGTTTAAGGT+TGG | + | chr4.4:21451841-21451860 | MS.gene053587:intron | 25.0% |
| !! | TATTGAACATTTTGGATCTT+CGG | + | chr4.4:21454764-21454783 | MS.gene053587:intron | 25.0% |
| !! | TCCTTTAAAAATCACAAGAA+TGG | - | chr4.4:21452005-21452024 | None:intergenic | 25.0% |
| !! | TTATTGAGAATGCAAGTTTT+TGG | + | chr4.4:21454578-21454597 | MS.gene053587:intron | 25.0% |
| !! | TTCATTTTGCATATTTTCAC+TGG | + | chr4.4:21453564-21453583 | MS.gene053587:intron | 25.0% |
| !!! | ACAAAAGTGTCATTAATTTG+CGG | - | chr4.4:21454067-21454086 | None:intergenic | 25.0% |
| !!! | ATATAACTTTGAAACTCACA+TGG | - | chr4.4:21452992-21453011 | None:intergenic | 25.0% |
| !!! | GACAAATCTACAATTTTTTC+GGG | - | chr4.4:21452526-21452545 | None:intergenic | 25.0% |
| !!! | GCGTGCATAATTTTTTAATT+TGG | + | chr4.4:21454676-21454695 | MS.gene053587:intron | 25.0% |
| !!! | GGACAAATCTACAATTTTTT+CGG | - | chr4.4:21452527-21452546 | None:intergenic | 25.0% |
| !!! | TAATTTGCATTGGATTTTGA+GGG | - | chr4.4:21453866-21453885 | None:intergenic | 25.0% |
| !!! | TAGGCTTTATTCAACTTAAA+TGG | - | chr4.4:21452694-21452713 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTGTCAAGTTTT+TGG | + | chr4.4:21454654-21454673 | MS.gene053587:intron | 25.0% |
| !!! | TCTTAATATTGGTGCTAATA+CGG | + | chr4.4:21453054-21453073 | MS.gene053587:intron | 25.0% |
| AAAACTTCAATTGAACGATG+GGG | - | chr4.4:21451732-21451751 | None:intergenic | 30.0% | |
| AACTACTATCATTATCCACA+TGG | - | chr4.4:21454642-21454661 | None:intergenic | 30.0% | |
| AAGTTGAATAAAGCCTATCT+TGG | + | chr4.4:21452697-21452716 | MS.gene053587:intron | 30.0% | |
| ACCAATGTCACAAGAAAATA+AGG | - | chr4.4:21454121-21454140 | None:intergenic | 30.0% | |
| ACTACTATCATTATCCACAT+GGG | - | chr4.4:21454641-21454660 | None:intergenic | 30.0% | |
| ATTCATCTAATAGGATGCAA+CGG | + | chr4.4:21452878-21452897 | MS.gene053587:intron | 30.0% | |
| CTGTATTGTTACTCTTAGAT+GGG | + | chr4.4:21452068-21452087 | MS.gene053587:CDS | 30.0% | |
| GCACCAATATTAAGACTAAA+AGG | - | chr4.4:21453049-21453068 | None:intergenic | 30.0% | |
| GCATTCTCAATAACATGAAT+TGG | - | chr4.4:21454571-21454590 | None:intergenic | 30.0% | |
| TATGTTATTCATTCCGCATT+CGG | + | chr4.4:21453626-21453645 | MS.gene053587:intron | 30.0% | |
| TGAAAACAGTTCGAGTATTA+GGG | + | chr4.4:21454970-21454989 | MS.gene053587:intron | 30.0% | |
| ! | AAGAAACTAAAATTAGCCTC+AGG | + | chr4.4:21454312-21454331 | MS.gene053587:intron | 30.0% |
| ! | ACTGAATTTGAGATTCCTTT+AGG | + | chr4.4:21455071-21455090 | MS.gene053587:CDS | 30.0% |
| ! | CATGAAATTTGAAGCATCTT+TGG | - | chr4.4:21453950-21453969 | None:intergenic | 30.0% |
| ! | GATTACACTCTAATTTGCAT+TGG | - | chr4.4:21453876-21453895 | None:intergenic | 30.0% |
| ! | TCTTTATGTTAGCTTAGCAT+AGG | + | chr4.4:21453235-21453254 | MS.gene053587:intron | 30.0% |
| !! | AAAGCTTTGAATTACGGAAA+GGG | - | chr4.4:21452270-21452289 | None:intergenic | 30.0% |
| !! | CTAATTTGCATTGGATTTTG+AGG | - | chr4.4:21453867-21453886 | None:intergenic | 30.0% |
| !! | CTATTTGCTACCTTTTTGTT+TGG | + | chr4.4:21453832-21453851 | MS.gene053587:intron | 30.0% |
| !! | TCTTATGTGTTTTTATCCTC+AGG | + | chr4.4:21454164-21454183 | MS.gene053587:intron | 30.0% |
| !!! | ACCTTATTTTCTTGTGACAT+TGG | + | chr4.4:21454117-21454136 | MS.gene053587:intron | 30.0% |
| !!! | GATGTTTTGAGAAGAAAATC+CGG | + | chr4.4:21452338-21452357 | MS.gene053587:CDS | 30.0% |
| AAACTTCAATTGAACGATGG+GGG | - | chr4.4:21451731-21451750 | None:intergenic | 35.0% | |
| ACATCCAGGTTACATGAAAA+CGG | - | chr4.4:21453700-21453719 | None:intergenic | 35.0% | |
| ACCTGATCATCAAAACCTAA+AGG | - | chr4.4:21455089-21455108 | None:intergenic | 35.0% | |
| ACCTGCATTTCATTACAAAG+GGG | - | chr4.4:21452043-21452062 | None:intergenic | 35.0% | |
| ATTAGAGTGTAATCCGTTAG+TGG | + | chr4.4:21453882-21453901 | MS.gene053587:intron | 35.0% | |
| ATTCCAATATGAGGACTTAC+TGG | + | chr4.4:21455207-21455226 | MS.gene053587:CDS | 35.0% | |
| CACCTGCATTTCATTACAAA+GGG | - | chr4.4:21452044-21452063 | None:intergenic | 35.0% | |
| CATCTACGTTCACTTAAGAA+TGG | - | chr4.4:21453102-21453121 | None:intergenic | 35.0% | |
| CATGATTTAACACCTAGTTC+TGG | - | chr4.4:21453300-21453319 | None:intergenic | 35.0% | |
| CTACTATCATTATCCACATG+GGG | - | chr4.4:21454640-21454659 | None:intergenic | 35.0% | |
| CTGAAAACAGTTCGAGTATT+AGG | + | chr4.4:21454969-21454988 | MS.gene053587:intron | 35.0% | |
| GCTGTATTGTTACTCTTAGA+TGG | + | chr4.4:21452067-21452086 | MS.gene053587:CDS | 35.0% | |
| GGCAAGTAATCCAAACAAAA+AGG | - | chr4.4:21453845-21453864 | None:intergenic | 35.0% | |
| TATTTACCAACTAGAACCCA+TGG | + | chr4.4:21453345-21453364 | MS.gene053587:intron | 35.0% | |
| TCAAGAAAGAAACCTCAAAC+TGG | - | chr4.4:21453911-21453930 | None:intergenic | 35.0% | |
| TCCGTAATTCAAAGCTTTCA+CGG | + | chr4.4:21452272-21452291 | MS.gene053587:CDS | 35.0% | |
| TTAAAGTGTAATGCCGAATG+CGG | - | chr4.4:21453642-21453661 | None:intergenic | 35.0% | |
| TTAGACACTAACATGTTCTG+CGG | + | chr4.4:21452816-21452835 | MS.gene053587:intron | 35.0% | |
| TTGAAACTCACATGGATTCT+GGG | - | chr4.4:21452984-21453003 | None:intergenic | 35.0% | |
| ! | ATGAATTGGTCTCAATTTGC+TGG | - | chr4.4:21454557-21454576 | None:intergenic | 35.0% |
| ! | ATGAGTTCTGACATACATAC+AGG | + | chr4.4:21455172-21455191 | MS.gene053587:intron | 35.0% |
| ! | ATTTGACTTATCTGCTCACA+TGG | + | chr4.4:21454348-21454367 | MS.gene053587:intron | 35.0% |
| ! | GATGCAACACTAGAGAATTT+TGG | + | chr4.4:21453756-21453775 | MS.gene053587:intron | 35.0% |
| ! | TCTAGGGTTGTTATGATCTT+TGG | + | chr4.4:21452396-21452415 | MS.gene053587:intron | 35.0% |
| ! | TCTGGTATGTTACACTTTTG+AGG | + | chr4.4:21455005-21455024 | MS.gene053587:intron | 35.0% |
| ! | TGCTTTTGAACAGAATGAAC+TGG | + | chr4.4:21453534-21453553 | MS.gene053587:CDS | 35.0% |
| ! | TTAGGGCATTATTTGAGATC+TGG | + | chr4.4:21454987-21455006 | MS.gene053587:intron | 35.0% |
| ! | TTTAAGATTGGGCAAGTAGT+TGG | + | chr4.4:21452602-21452621 | MS.gene053587:intron | 35.0% |
| ! | TTTGAAACTCACATGGATTC+TGG | - | chr4.4:21452985-21453004 | None:intergenic | 35.0% |
| ! | TTTGACTTATCTGCTCACAT+GGG | + | chr4.4:21454349-21454368 | MS.gene053587:intron | 35.0% |
| ! | TTTTCATGTAACCTGGATGT+TGG | + | chr4.4:21453700-21453719 | MS.gene053587:intron | 35.0% |
| ! | TTTTTCACCTTCGTCAGAAA+CGG | - | chr4.4:21451578-21451597 | None:intergenic | 35.0% |
| !! | ACACTAGAGAATTTTGGCAT+AGG | + | chr4.4:21453762-21453781 | MS.gene053587:intron | 35.0% |
| !! | GAAAGCTTTGAATTACGGAA+AGG | - | chr4.4:21452271-21452290 | None:intergenic | 35.0% |
| !! | GTTACACTTTTGAGGATTAC+AGG | + | chr4.4:21455013-21455032 | MS.gene053587:intron | 35.0% |
| !! | TCCGTGAAAGCTTTGAATTA+CGG | - | chr4.4:21452276-21452295 | None:intergenic | 35.0% |
| !! | TCCTTTAGGTTTTGATGATC+AGG | + | chr4.4:21455085-21455104 | MS.gene053587:CDS | 35.0% |
| !!! | ATAGTGGGTTTTCTACAATG+TGG | + | chr4.4:21451876-21451895 | MS.gene053587:intron | 35.0% |
| AAAAGCTCCTGTTTAAGCCA+TGG | - | chr4.4:21453365-21453384 | None:intergenic | 40.0% | |
| AAAGCTCCTGTTTAAGCCAT+GGG | - | chr4.4:21453364-21453383 | None:intergenic | 40.0% | |
| AACATAAACCTCGCCTTCAA+AGG | - | chr4.4:21451656-21451675 | None:intergenic | 40.0% | |
| AAGATTTCCCAAGTCACTTC+AGG | - | chr4.4:21453427-21453446 | None:intergenic | 40.0% | |
| AAGCATCTTTGGTTGAGAAC+AGG | - | chr4.4:21453939-21453958 | None:intergenic | 40.0% | |
| AAGGCTAGCATTAGCAAGAT+TGG | - | chr4.4:21455118-21455137 | None:intergenic | 40.0% | |
| AATAGGATGCAACGGAAGAA+TGG | + | chr4.4:21452886-21452905 | MS.gene053587:intron | 40.0% | |
| AATTGGTGCAAAGTCTACTC+CGG | + | chr4.4:21453134-21453153 | MS.gene053587:CDS | 40.0% | |
| AATTTCCTCATGATAGCCTG+AGG | - | chr4.4:21454331-21454350 | None:intergenic | 40.0% | |
| ACCCCTTTGTAATGAAATGC+AGG | + | chr4.4:21452039-21452058 | MS.gene053587:intron | 40.0% | |
| ACCTGAGATGATAATTGAGC+AGG | + | chr4.4:21454233-21454252 | MS.gene053587:CDS | 40.0% | |
| ACCTGCTCAATTATCATCTC+AGG | - | chr4.4:21454237-21454256 | None:intergenic | 40.0% | |
| AGAAAATTCATGTGCTGCAC+AGG | + | chr4.4:21454013-21454032 | MS.gene053587:CDS | 40.0% | |
| AGAACTCTATGCAATGCTTG+CGG | + | chr4.4:21453183-21453202 | MS.gene053587:CDS | 40.0% | |
| AGAGGGGAAAGTCATGAAAA+GGG | + | chr4.4:21454934-21454953 | MS.gene053587:intron | 40.0% | |
| AGCATTATTCTCCACTTGGA+TGG | - | chr4.4:21454842-21454861 | None:intergenic | 40.0% | |
| AGGTTACATGAAAACGGAAC+TGG | - | chr4.4:21453694-21453713 | None:intergenic | 40.0% | |
| ATATTTAAAGAGGGAGGCAG+GGG | - | chr4.4:21452667-21452686 | None:intergenic | 40.0% | |
| ATGCTGAATTCGTCTGAGAA+TGG | + | chr4.4:21451520-21451539 | MS.gene053587:CDS | 40.0% | |
| ATTATTGACCTACGTTCGCA+TGG | + | chr4.4:21453461-21453480 | MS.gene053587:intron | 40.0% | |
| ATTGTTACTCTTAGATGGGC+AGG | + | chr4.4:21452072-21452091 | MS.gene053587:CDS | 40.0% | |
| CATATTTAAAGAGGGAGGCA+GGG | - | chr4.4:21452668-21452687 | None:intergenic | 40.0% | |
| CATTACAAAGGGGTGATCAA+AGG | - | chr4.4:21452033-21452052 | None:intergenic | 40.0% | |
| CTAGCATTAGCAAGATTGGA+TGG | - | chr4.4:21455114-21455133 | None:intergenic | 40.0% | |
| CTCTTCATTCGGACATGTAT+TGG | + | chr4.4:21452176-21452195 | MS.gene053587:intron | 40.0% | |
| GAAAGTCATGAAAAGGGTTG+AGG | + | chr4.4:21454940-21454959 | MS.gene053587:intron | 40.0% | |
| GAACTCACCATTTCCTTTGA+AGG | + | chr4.4:21451640-21451659 | MS.gene053587:CDS | 40.0% | |
| GACTTCCTACTCTTCAAATG+AGG | + | chr4.4:21454901-21454920 | MS.gene053587:intron | 40.0% | |
| GCACCTGCATTTCATTACAA+AGG | - | chr4.4:21452045-21452064 | None:intergenic | 40.0% | |
| GCATGGTCTGTTGATATGAA+GGG | + | chr4.4:21453478-21453497 | MS.gene053587:intron | 40.0% | |
| GGATACCTCATTTGAAGAGT+AGG | - | chr4.4:21454909-21454928 | None:intergenic | 40.0% | |
| GGTTACATGAAAACGGAACT+GGG | - | chr4.4:21453693-21453712 | None:intergenic | 40.0% | |
| TACGTTCACTTAAGAATGGC+AGG | - | chr4.4:21453098-21453117 | None:intergenic | 40.0% | |
| TGAAACAAAGCCTTTGCCAA+TGG | + | chr4.4:21454197-21454216 | MS.gene053587:CDS | 40.0% | |
| TGCACGACATTAGAATATGC+TGG | + | chr4.4:21452764-21452783 | MS.gene053587:intron | 40.0% | |
| TGCGAACGTAGGTCAATAAT+TGG | - | chr4.4:21453461-21453480 | None:intergenic | 40.0% | |
| TGCTGAATTCGTCTGAGAAT+GGG | + | chr4.4:21451521-21451540 | MS.gene053587:CDS | 40.0% | |
| TGGACAGTTTGCATCATTGA+AGG | + | chr4.4:21452906-21452925 | MS.gene053587:CDS | 40.0% | |
| TTGTAATGAAATGCAGGTGC+AGG | + | chr4.4:21452045-21452064 | MS.gene053587:intron | 40.0% | |
| ! | AAATGAGGTATCCTTCTGAG+AGG | + | chr4.4:21454916-21454935 | MS.gene053587:intron | 40.0% |
| ! | AATGAGGTATCCTTCTGAGA+GGG | + | chr4.4:21454917-21454936 | MS.gene053587:intron | 40.0% |
| ! | AGGATTTTGCTGATGCATCT+GGG | + | chr4.4:21455048-21455067 | MS.gene053587:CDS | 40.0% |
| ! | AGTTCCGTTTTCATGTAACC+TGG | + | chr4.4:21453693-21453712 | MS.gene053587:intron | 40.0% |
| ! | CAAGCATTGCATAGAGTTCT+TGG | - | chr4.4:21453183-21453202 | None:intergenic | 40.0% |
| ! | GGAAGCATATTTAAAGAGGG+AGG | - | chr4.4:21452673-21452692 | None:intergenic | 40.0% |
| ! | TCTCAAGTTGTCACATCACA+TGG | + | chr4.4:21453727-21453746 | MS.gene053587:intron | 40.0% |
| ! | TGATAACTTGTCCATCCAAG+TGG | + | chr4.4:21454828-21454847 | MS.gene053587:CDS | 40.0% |
| ! | TGTGCAGCACATGAATTTTC+TGG | - | chr4.4:21454014-21454033 | None:intergenic | 40.0% |
| ! | TTATGATCTTTGGTGCAGTC+TGG | + | chr4.4:21452406-21452425 | MS.gene053587:intron | 40.0% |
| ! | TTTAAGCCATGGGTTCTAGT+TGG | - | chr4.4:21453354-21453373 | None:intergenic | 40.0% |
| !! | AATTGGTCTCAATTTGCTGG+AGG | - | chr4.4:21454554-21454573 | None:intergenic | 40.0% |
| !! | ATGAACCTTTTCTGGCGTAA+CGG | - | chr4.4:21451686-21451705 | None:intergenic | 40.0% |
| !! | ATTGGTCTCAATTTGCTGGA+GGG | - | chr4.4:21454553-21454572 | None:intergenic | 40.0% |
| !! | CAAGAGCATTATTCTCCACT+TGG | - | chr4.4:21454846-21454865 | None:intergenic | 40.0% |
| !! | TGGCAAAGGCTTTGTTTCAT+GGG | - | chr4.4:21454196-21454215 | None:intergenic | 40.0% |
| !! | TTGGCAAAGGCTTTGTTTCA+TGG | - | chr4.4:21454197-21454216 | None:intergenic | 40.0% |
| AACCTCGCCTTCAAAGGAAA+TGG | - | chr4.4:21451650-21451669 | None:intergenic | 45.0% | |
| AAGGGAACACTGAGAGATCT+CGG | + | chr4.4:21453496-21453515 | MS.gene053587:intron | 45.0% | |
| AAGTTCTGCACTCCAGAACT+AGG | + | chr4.4:21453285-21453304 | MS.gene053587:intron | 45.0% | |
| ACCTCTCAGCAAGCTCTTTA+CGG | - | chr4.4:21452372-21452391 | None:intergenic | 45.0% | |
| AGATGCCAGCATTGTGGAAT+TGG | + | chr4.4:21453117-21453136 | MS.gene053587:CDS | 45.0% | |
| AGCAAAACTGTCGGGACATT+TGG | + | chr4.4:21452134-21452153 | MS.gene053587:CDS | 45.0% | |
| AGCTACATTGGTACAGTGCA+TGG | - | chr4.4:21451554-21451573 | None:intergenic | 45.0% | |
| AGTGGAACAGAAGCGGTAAT+GGG | - | chr4.4:21451607-21451626 | None:intergenic | 45.0% | |
| CAAGTCACTTCAGGCAAGAT+GGG | - | chr4.4:21453418-21453437 | None:intergenic | 45.0% | |
| CAGCCAGTAAGTCCTCATAT+TGG | - | chr4.4:21455213-21455232 | None:intergenic | 45.0% | |
| CATCTTGCCTGAAGTGACTT+GGG | + | chr4.4:21453417-21453436 | MS.gene053587:intron | 45.0% | |
| CGCATGGTCTGTTGATATGA+AGG | + | chr4.4:21453477-21453496 | MS.gene053587:intron | 45.0% | |
| CTAGAACCCATGGCTTAAAC+AGG | + | chr4.4:21453355-21453374 | MS.gene053587:intron | 45.0% | |
| CTCAAACTGGTGACCACTAA+CGG | - | chr4.4:21453898-21453917 | None:intergenic | 45.0% | |
| CTTGAGAAGATCCAACATCC+AGG | - | chr4.4:21453714-21453733 | None:intergenic | 45.0% | |
| GAACTCTATGCAATGCTTGC+GGG | + | chr4.4:21453184-21453203 | MS.gene053587:CDS | 45.0% | |
| GAGAGGGGAAAGTCATGAAA+AGG | + | chr4.4:21454933-21454952 | MS.gene053587:intron | 45.0% | |
| GCAAAACTGTCGGGACATTT+GGG | + | chr4.4:21452135-21452154 | MS.gene053587:CDS | 45.0% | |
| GCATATTTAAAGAGGGAGGC+AGG | - | chr4.4:21452669-21452688 | None:intergenic | 45.0% | |
| GGAGATCTGCATCACTTGTT+AGG | + | chr4.4:21452293-21452312 | MS.gene053587:CDS | 45.0% | |
| GTCAGAAACGGAAGCTACAT+TGG | - | chr4.4:21451566-21451585 | None:intergenic | 45.0% | |
| TATCATCTCAGGTGACTGTC+TGG | - | chr4.4:21454226-21454245 | None:intergenic | 45.0% | |
| TATTTAAAGAGGGAGGCAGG+GGG | - | chr4.4:21452666-21452685 | None:intergenic | 45.0% | |
| TGCACCGAAAAGTCAGAAGT+GGG | - | chr4.4:21452115-21452134 | None:intergenic | 45.0% | |
| TTAGTGTCTTTAGCCCCATG+TGG | + | chr4.4:21454624-21454643 | MS.gene053587:intron | 45.0% | |
| TTCGTCTGAGAATGGGTCAA+TGG | + | chr4.4:21451528-21451547 | MS.gene053587:CDS | 45.0% | |
| TTGCACCAATTCCACAATGC+TGG | - | chr4.4:21453125-21453144 | None:intergenic | 45.0% | |
| TTGCTGAGAGGTAGAGTCTA+GGG | + | chr4.4:21452380-21452399 | MS.gene053587:intron | 45.0% | |
| ! | ACTCACATGGATTCTGGGAA+AGG | - | chr4.4:21452979-21452998 | None:intergenic | 45.0% |
| ! | ATGAGGTATCCTTCTGAGAG+GGG | + | chr4.4:21454918-21454937 | MS.gene053587:intron | 45.0% |
| ! | ATTAGCCTCAGGCTATCATG+AGG | + | chr4.4:21454323-21454342 | MS.gene053587:intron | 45.0% |
| ! | CGTACCCACTTCTGACTTTT+CGG | + | chr4.4:21452108-21452127 | MS.gene053587:CDS | 45.0% |
| ! | GAGGATTTTGCTGATGCATC+TGG | + | chr4.4:21455047-21455066 | MS.gene053587:CDS | 45.0% |
| ! | GAGTACTGTTGCTAGAATCC+TGG | - | chr4.4:21452957-21452976 | None:intergenic | 45.0% |
| ! | TTTCGGTGCAGCAAAACTGT+CGG | + | chr4.4:21452125-21452144 | MS.gene053587:CDS | 45.0% |
| !! | CTAGAATCCTGGTTTTCAGC+AGG | - | chr4.4:21452946-21452965 | None:intergenic | 45.0% |
| !! | GCAAAGGCTTTGTTTCATGG+GGG | - | chr4.4:21454194-21454213 | None:intergenic | 45.0% |
| !! | GGCAAAGGCTTTGTTTCATG+GGG | - | chr4.4:21454195-21454214 | None:intergenic | 45.0% |
| ACGAGAGAGTGGAACAGAAG+CGG | - | chr4.4:21451614-21451633 | None:intergenic | 50.0% | |
| AGTTCACTAGCACGAGAGAG+TGG | - | chr4.4:21451625-21451644 | None:intergenic | 50.0% | |
| ATGTGCTGCACAGGACAAGA+AGG | + | chr4.4:21454022-21454041 | MS.gene053587:CDS | 50.0% | |
| CAAGCTTTCACGTGAAGACG+TGG | - | chr4.4:21452640-21452659 | None:intergenic | 50.0% | |
| CAGTTCTCCTGCTGAAAACC+AGG | + | chr4.4:21452936-21452955 | MS.gene053587:CDS | 50.0% | |
| CATAGAGTTCTTGGACCAGC+CGG | - | chr4.4:21453174-21453193 | None:intergenic | 50.0% | |
| CATGACTTTCCCCTCTCAGA+AGG | - | chr4.4:21454930-21454949 | None:intergenic | 50.0% | |
| CCAAGTCACTTCAGGCAAGA+TGG | - | chr4.4:21453419-21453438 | None:intergenic | 50.0% | |
| CCATCTTGCCTGAAGTGACT+TGG | + | chr4.4:21453416-21453435 | MS.gene053587:intron | 50.0% | |
| CGGGCTAAAGTGGGCAAATA+AGG | + | chr4.4:21453203-21453222 | MS.gene053587:CDS | 50.0% | |
| CGTTAGTGGTCACCAGTTTG+AGG | + | chr4.4:21453896-21453915 | MS.gene053587:intron | 50.0% | |
| CTGCACCGAAAAGTCAGAAG+TGG | - | chr4.4:21452116-21452135 | None:intergenic | 50.0% | |
| CTTGCTGAGAGGTAGAGTCT+AGG | + | chr4.4:21452379-21452398 | MS.gene053587:intron | 50.0% | |
| GAACGTAGATGCCAGCATTG+TGG | + | chr4.4:21453111-21453130 | MS.gene053587:CDS | 50.0% | |
| GAGTGGAACAGAAGCGGTAA+TGG | - | chr4.4:21451608-21451627 | None:intergenic | 50.0% | |
| GCTCTTTACGGCAAGTGTAC+CGG | - | chr4.4:21452360-21452379 | None:intergenic | 50.0% | |
| GTAGCTTCCGTTTCTGACGA+AGG | + | chr4.4:21451568-21451587 | MS.gene053587:CDS | 50.0% | |
| TCAACAGACCATGCGAACGT+AGG | - | chr4.4:21453472-21453491 | None:intergenic | 50.0% | |
| TCTGCGGATCTTCTCGACTT+TGG | + | chr4.4:21452832-21452851 | MS.gene053587:intron | 50.0% | |
| TGTCTGGCATCCATTGGCAA+AGG | - | chr4.4:21454210-21454229 | None:intergenic | 50.0% | |
| ! | CAATGCTTGCGGGCTAAAGT+GGG | + | chr4.4:21453194-21453213 | MS.gene053587:CDS | 50.0% |
| ! | CACCATTTCCTTTGAAGGCG+AGG | + | chr4.4:21451645-21451664 | MS.gene053587:CDS | 50.0% |
| ! | TTCGGTGCAGCAAAACTGTC+GGG | + | chr4.4:21452126-21452145 | MS.gene053587:CDS | 50.0% |
| !! | ACAGAAGCGGTAATGGGTTG+AGG | - | chr4.4:21451601-21451620 | None:intergenic | 50.0% |
| !! | ACCTTTTCTGGCGTAACGGA+AGG | - | chr4.4:21451682-21451701 | None:intergenic | 50.0% |
| !! | CCTTTTCTGGCGTAACGGAA+GGG | - | chr4.4:21451681-21451700 | None:intergenic | 50.0% |
| !!! | GGAAAGGGTCATTTTTCCCC+TGG | - | chr4.4:21452255-21452274 | None:intergenic | 50.0% |
| CACGTGAAGACGTGGCACAA+AGG | - | chr4.4:21452632-21452651 | None:intergenic | 55.0% | |
| CCCTTCCGTTACGCCAGAAA+AGG | + | chr4.4:21451678-21451697 | MS.gene053587:CDS | 55.0% | |
| CTGAGAGATCTCGGCAAAGC+AGG | + | chr4.4:21453505-21453524 | MS.gene053587:CDS | 55.0% | |
| GAGATCTCGGCAAAGCAGGA+AGG | + | chr4.4:21453509-21453528 | MS.gene053587:CDS | 55.0% | |
| GGTGACTGTCTGGCATCCAT+TGG | - | chr4.4:21454216-21454235 | None:intergenic | 55.0% | |
| GTTTCATGGGGGCTTTCCTG+AGG | - | chr4.4:21454183-21454202 | None:intergenic | 55.0% | |
| TCTACTCCGGTAATGCGTCG+AGG | + | chr4.4:21453147-21453166 | MS.gene053587:CDS | 55.0% | |
| TGCTCTTGATCTGCACGAGC+AGG | + | chr4.4:21454858-21454877 | MS.gene053587:CDS | 55.0% | |
| ! | GCAATGCTTGCGGGCTAAAG+TGG | + | chr4.4:21453193-21453212 | MS.gene053587:CDS | 55.0% |
| !! | GCCGTAAAGAGCTTGCTGAG+AGG | + | chr4.4:21452368-21452387 | MS.gene053587:CDS | 55.0% |
| TCCGGTAATGCGTCGAGGAC+CGG | + | chr4.4:21453152-21453171 | MS.gene053587:CDS | 60.0% | |
| TTAAAGAGGGAGGCAGGGGG+AGG | - | chr4.4:21452663-21452682 | None:intergenic | 60.0% | |
| GCCGGTCCTCGACGCATTAC+CGG | - | chr4.4:21453156-21453175 | None:intergenic | 65.0% | |
| GTAATGCGTCGAGGACCGGC+TGG | + | chr4.4:21453156-21453175 | MS.gene053587:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 21451514 | 21455235 | 21451514 | ID=MS.gene053587 |
| chr4.4 | mRNA | 21451514 | 21455235 | 21451514 | ID=MS.gene053587.t1;Parent=MS.gene053587 |
| chr4.4 | exon | 21451514 | 21451699 | 21451514 | ID=MS.gene053587.t1.exon1;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21451514 | 21451699 | 21451514 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21452061 | 21452156 | 21452061 | ID=MS.gene053587.t1.exon2;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21452061 | 21452156 | 21452061 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21452256 | 21452389 | 21452256 | ID=MS.gene053587.t1.exon3;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21452256 | 21452389 | 21452256 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21452891 | 21452992 | 21452891 | ID=MS.gene053587.t1.exon4;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21452891 | 21452992 | 21452891 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21453110 | 21453224 | 21453110 | ID=MS.gene053587.t1.exon5;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21453110 | 21453224 | 21453110 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21453499 | 21453555 | 21453499 | ID=MS.gene053587.t1.exon6;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21453499 | 21453555 | 21453499 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21453996 | 21454043 | 21453996 | ID=MS.gene053587.t1.exon7;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21453996 | 21454043 | 21453996 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21454186 | 21454254 | 21454186 | ID=MS.gene053587.t1.exon8;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21454186 | 21454254 | 21454186 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21454799 | 21454879 | 21454799 | ID=MS.gene053587.t1.exon9;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21454799 | 21454879 | 21454799 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21455035 | 21455106 | 21455035 | ID=MS.gene053587.t1.exon10;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21455035 | 21455106 | 21455035 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| chr4.4 | exon | 21455194 | 21455235 | 21455194 | ID=MS.gene053587.t1.exon11;Parent=MS.gene053587.t1 |
| chr4.4 | CDS | 21455194 | 21455235 | 21455194 | ID=cds.MS.gene053587.t1;Parent=MS.gene053587.t1 |
| Gene Sequence |
| Protein sequence |
