Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053913.t1 | XP_003614420.1 | 97.3 | 442 | 12 | 0 | 3 | 444 | 4 | 445 | 7.30E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053913.t1 | Q6NQK2 | 58.3 | 458 | 156 | 10 | 4 | 441 | 5 | 447 | 1.7e-134 | 480.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053913.t1 | G7JX37 | 97.3 | 442 | 12 | 0 | 3 | 444 | 4 | 445 | 5.2e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053913.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053913.t1 | MTR_5g053430 | 97.285 | 442 | 12 | 0 | 3 | 444 | 4 | 445 | 0.0 | 894 |
| MS.gene053913.t1 | MTR_5g053430 | 96.606 | 442 | 12 | 1 | 3 | 444 | 4 | 442 | 0.0 | 883 |
| MS.gene053913.t1 | MTR_1g093680 | 61.715 | 478 | 143 | 8 | 3 | 443 | 6 | 480 | 0.0 | 565 |
| MS.gene053913.t1 | MTR_1g093670 | 51.493 | 402 | 131 | 9 | 40 | 439 | 6 | 345 | 1.55e-122 | 360 |
| MS.gene053913.t1 | MTR_7g033320 | 53.913 | 230 | 82 | 3 | 1 | 218 | 1 | 218 | 2.25e-83 | 265 |
| MS.gene053913.t1 | MTR_2g014680 | 49.402 | 251 | 117 | 4 | 33 | 273 | 27 | 277 | 4.20e-76 | 240 |
| MS.gene053913.t1 | MTR_4g088245 | 58.586 | 198 | 79 | 2 | 35 | 229 | 44 | 241 | 1.25e-75 | 239 |
| MS.gene053913.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 35 | 217 | 27 | 215 | 8.74e-73 | 237 |
| MS.gene053913.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 35 | 217 | 27 | 215 | 8.96e-73 | 237 |
| MS.gene053913.t1 | MTR_8g069160 | 60.556 | 180 | 68 | 2 | 35 | 211 | 44 | 223 | 2.92e-72 | 228 |
| MS.gene053913.t1 | MTR_4g078875 | 55.330 | 197 | 83 | 2 | 31 | 222 | 19 | 215 | 2.37e-68 | 219 |
| MS.gene053913.t1 | MTR_2g090735 | 55.446 | 202 | 86 | 2 | 31 | 228 | 20 | 221 | 7.18e-64 | 207 |
| MS.gene053913.t1 | MTR_6g084430 | 30.168 | 179 | 107 | 6 | 57 | 232 | 5 | 168 | 4.14e-14 | 73.6 |
| MS.gene053913.t1 | MTR_2157s0010 | 28.796 | 191 | 104 | 8 | 55 | 228 | 6 | 181 | 8.05e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053913.t1 | AT1G25580 | 57.081 | 459 | 162 | 10 | 4 | 442 | 5 | 448 | 2.41e-174 | 496 |
| MS.gene053913.t1 | AT3G01600 | 55.111 | 225 | 94 | 4 | 1 | 223 | 1 | 220 | 1.27e-78 | 248 |
| MS.gene053913.t1 | AT5G14490 | 51.383 | 253 | 108 | 6 | 1 | 249 | 1 | 242 | 5.30e-78 | 244 |
| MS.gene053913.t1 | AT5G14490 | 51.383 | 253 | 108 | 6 | 1 | 249 | 1 | 242 | 6.60e-78 | 246 |
| MS.gene053913.t1 | AT5G14490 | 50.988 | 253 | 109 | 6 | 1 | 249 | 4 | 245 | 4.44e-77 | 244 |
| MS.gene053913.t1 | AT5G14490 | 50.988 | 253 | 109 | 6 | 1 | 249 | 4 | 245 | 7.46e-77 | 244 |
| MS.gene053913.t1 | AT4G29230 | 59.375 | 192 | 67 | 3 | 35 | 217 | 28 | 217 | 2.70e-74 | 239 |
| MS.gene053913.t1 | AT4G29230 | 59.375 | 192 | 67 | 3 | 35 | 217 | 28 | 217 | 9.43e-74 | 240 |
| MS.gene053913.t1 | AT4G29230 | 59.375 | 192 | 66 | 3 | 35 | 217 | 28 | 216 | 1.53e-73 | 239 |
| MS.gene053913.t1 | AT4G28500 | 51.556 | 225 | 103 | 4 | 4 | 222 | 2 | 226 | 4.36e-72 | 229 |
| MS.gene053913.t1 | AT1G28470 | 51.598 | 219 | 97 | 3 | 13 | 222 | 25 | 243 | 2.23e-71 | 228 |
| MS.gene053913.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 35 | 217 | 22 | 215 | 6.88e-68 | 222 |
| MS.gene053913.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 35 | 217 | 22 | 215 | 6.88e-68 | 222 |
| MS.gene053913.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 35 | 217 | 22 | 215 | 1.38e-67 | 221 |
| MS.gene053913.t1 | AT3G18400 | 30.588 | 170 | 95 | 8 | 57 | 220 | 5 | 157 | 9.08e-14 | 72.4 |
| MS.gene053913.t1 | AT1G01720 | 25.614 | 285 | 164 | 12 | 57 | 323 | 7 | 261 | 3.34e-13 | 70.5 |
| MS.gene053913.t1 | AT3G12910 | 31.544 | 149 | 86 | 5 | 60 | 205 | 24 | 159 | 2.03e-11 | 65.1 |
| MS.gene053913.t1 | AT1G02220 | 31.250 | 160 | 90 | 6 | 58 | 214 | 4 | 146 | 2.81e-11 | 65.5 |
| MS.gene053913.t1 | AT1G33060 | 29.341 | 167 | 96 | 7 | 56 | 215 | 23 | 174 | 5.39e-11 | 65.1 |
| MS.gene053913.t1 | AT1G33060 | 29.341 | 167 | 96 | 7 | 56 | 215 | 23 | 174 | 5.47e-11 | 65.1 |
| MS.gene053913.t1 | AT5G53950 | 28.837 | 215 | 125 | 10 | 57 | 261 | 17 | 213 | 6.54e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAGTATGCTGACAATT+TGG | 0.134743 | 5.3:-43050580 | None:intergenic |
| CTTCTTCCACAGAGCAATTA+AGG | 0.224693 | 5.3:+43051968 | MS.gene053913:CDS |
| GGATCAAATTTGACACCTTT+TGG | 0.259342 | 5.3:-43051697 | None:intergenic |
| TGAACCCCATTCAAGATTAC+TGG | 0.283602 | 5.3:-43052077 | None:intergenic |
| GAAAAGCTGAGAAAACTAAT+TGG | 0.286732 | 5.3:+43052150 | MS.gene053913:CDS |
| CAAGATAGCTTTATAGCATT+TGG | 0.294737 | 5.3:+43053924 | MS.gene053913:CDS |
| TTTGTGTTTATATAGGAATT+TGG | 0.295109 | 5.3:+43053897 | MS.gene053913:intron |
| CATCTGATCAGGAGGTAATT+TGG | 0.312766 | 5.3:+43051719 | MS.gene053913:CDS |
| GGCTCAGGAGTCACAGATTT+GGG | 0.319343 | 5.3:-43052338 | None:intergenic |
| CAATAGTATGCTGACAATTT+GGG | 0.324090 | 5.3:-43050579 | None:intergenic |
| CCAACAGCAGCAAGTCAAAC+TGG | 0.324794 | 5.3:+43052247 | MS.gene053913:CDS |
| AGGCTCAGGAGTCACAGATT+TGG | 0.328067 | 5.3:-43052339 | None:intergenic |
| GACGTCCGCTGGCACAAAAC+TGG | 0.357268 | 5.3:+43052044 | MS.gene053913:CDS |
| TCTGTTGGATTCACAACAAC+TGG | 0.369929 | 5.3:+43053583 | MS.gene053913:CDS |
| AAAATACATGATCAGGATTT+GGG | 0.372286 | 5.3:+43052020 | MS.gene053913:CDS |
| ATCTTGAATGGGGTTCAAAA+AGG | 0.388213 | 5.3:+43052083 | MS.gene053913:CDS |
| TTATAGTGAAAGACAGTATT+CGG | 0.389524 | 5.3:+43052364 | MS.gene053913:CDS |
| ACATTTGACTCTGCATTTGA+AGG | 0.393867 | 5.3:-43053770 | None:intergenic |
| GCAATTAAGGCTTATAATAC+TGG | 0.394443 | 5.3:+43051981 | MS.gene053913:CDS |
| ATTGTAGCTTCAATAGCTTC+AGG | 0.419674 | 5.3:-43052293 | None:intergenic |
| GAATACTGTCTTTCACTATA+AGG | 0.423713 | 5.3:-43052362 | None:intergenic |
| ATATCCTTCTTCAGATGCTC+TGG | 0.424976 | 5.3:-43053719 | None:intergenic |
| GTCACAGATTTGGGAGTAAC+CGG | 0.426136 | 5.3:-43052329 | None:intergenic |
| TCATCTTTACCATCTCTAGT+AGG | 0.429288 | 5.3:-43053650 | None:intergenic |
| CTAAGCCAGTAATCTTGAAT+GGG | 0.433717 | 5.3:+43052072 | MS.gene053913:CDS |
| CAAATTTGATCCATCTGATC+AGG | 0.442832 | 5.3:+43051708 | MS.gene053913:CDS |
| CAGTATTCGGATGTAGATCT+AGG | 0.447710 | 5.3:+43052377 | MS.gene053913:CDS |
| AGGAACAGAAGAGGATGAAA+AGG | 0.451744 | 5.3:+43052193 | MS.gene053913:CDS |
| ACTAAGCCAGTAATCTTGAA+TGG | 0.454048 | 5.3:+43052071 | MS.gene053913:CDS |
| ACCAAAATTAAAAGTGCATC+GGG | 0.455483 | 5.3:+43050505 | MS.gene053913:CDS |
| GCAAGTCAAACTGGGTGATA+AGG | 0.457369 | 5.3:+43052256 | MS.gene053913:CDS |
| AGGTTTACCTGGGGAATGGC+GGG | 0.461494 | 5.3:-43052410 | None:intergenic |
| AGGATTTGGGTGACGTCCGC+TGG | 0.463363 | 5.3:+43052033 | MS.gene053913:CDS |
| AAAAGCTGAGAAAACTAATT+GGG | 0.463490 | 5.3:+43052151 | MS.gene053913:CDS |
| GCCTCCTCAGATGAATTGTC+TGG | 0.464452 | 5.3:+43053373 | MS.gene053913:intron |
| GGAGTTTCGACTAAGTCAAT+TGG | 0.465851 | 5.3:+43053811 | MS.gene053913:CDS |
| ATTACTCTTGAAGTGAATGA+TGG | 0.470794 | 5.3:+43051805 | MS.gene053913:CDS |
| GAGTGGCCTGGTTTGCCAAA+AGG | 0.477697 | 5.3:+43051682 | MS.gene053913:CDS |
| TTTAAGGTTTACCTGGGGAA+TGG | 0.481491 | 5.3:-43052414 | None:intergenic |
| CATAAATAGAAAGGCTGGGT+TGG | 0.487379 | 5.3:-43053685 | None:intergenic |
| ATTGAAAATAATCCTGATGA+TGG | 0.487705 | 5.3:+43053530 | MS.gene053913:CDS |
| CTTTCTATTTATGCTCAGCT+AGG | 0.488398 | 5.3:+43053695 | MS.gene053913:CDS |
| TACAATCACAAAAGTGGATC+CGG | 0.490246 | 5.3:+43052310 | MS.gene053913:CDS |
| CTGAGCATAAATAGAAAGGC+TGG | 0.491378 | 5.3:-43053690 | None:intergenic |
| TGAAGCTACAATCACAAAAG+TGG | 0.498293 | 5.3:+43052304 | MS.gene053913:CDS |
| ACTCATCCTCAAAACTTGCC+AGG | 0.498733 | 5.3:+43051838 | MS.gene053913:CDS |
| CTGACAATTTGGGCAAGCCT+TGG | 0.506059 | 5.3:-43050569 | None:intergenic |
| TTTCTATATGCAGACCATCA+TGG | 0.507135 | 5.3:+43050458 | MS.gene053913:intron |
| GTTATGCATCAATATCATCT+AGG | 0.507798 | 5.3:+43052173 | MS.gene053913:CDS |
| CTTTCACTATAAGGAGGCTC+AGG | 0.512409 | 5.3:-43052353 | None:intergenic |
| TGCATCGGGAGCATGTGATC+CGG | 0.516041 | 5.3:+43050519 | MS.gene053913:CDS |
| CCAGTTTGACTTGCTGCTGT+TGG | 0.516424 | 5.3:-43052247 | None:intergenic |
| AAGGTTTACCTGGGGAATGG+CGG | 0.521012 | 5.3:-43052411 | None:intergenic |
| ATGTCAGGTGTTAAGCAAGA+TGG | 0.522325 | 5.3:+43051933 | MS.gene053913:intron |
| AATGAAAATAATGCTGATGA+TGG | 0.526709 | 5.3:+43053479 | MS.gene053913:CDS |
| AACCAAAATTAAAAGTGCAT+CGG | 0.530697 | 5.3:+43050504 | MS.gene053913:CDS |
| GTTCTGTATATGAGTAGTGC+AGG | 0.531845 | 5.3:+43052122 | MS.gene053913:CDS |
| TTGCTTGCAAAATGTGGTGT+TGG | 0.532555 | 5.3:+43051745 | MS.gene053913:CDS |
| TTTGCTTGCTCTTCACAATG+AGG | 0.533963 | 5.3:-43053407 | None:intergenic |
| CAATTTGGGCAAGCCTTGGT+AGG | 0.534551 | 5.3:-43050565 | None:intergenic |
| GTAGAAACTGAACATAATGA+AGG | 0.537204 | 5.3:+43053446 | MS.gene053913:CDS |
| ACTCTGCATTTGAAGGCTCA+AGG | 0.539581 | 5.3:-43053763 | None:intergenic |
| CTAGCTGAGCATAAATAGAA+AGG | 0.539748 | 5.3:-43053694 | None:intergenic |
| TAGTGAATCACAAAATCTGT+TGG | 0.540122 | 5.3:+43053568 | MS.gene053913:CDS |
| TACCATCTCTAGTAGGAGAC+TGG | 0.544929 | 5.3:-43053643 | None:intergenic |
| TAATTGCTCTGTGGAAGAAG+TGG | 0.556020 | 5.3:-43051965 | None:intergenic |
| GTTGTAAGGTTGTAAAAGAG+TGG | 0.556602 | 5.3:+43051665 | MS.gene053913:intron |
| CAAATTACCTCCTGATCAGA+TGG | 0.556689 | 5.3:-43051718 | None:intergenic |
| AGGACCAGAGCATCTGAAGA+AGG | 0.560183 | 5.3:+43053715 | MS.gene053913:CDS |
| AACTCGTCAACGAAAGGATG+AGG | 0.562435 | 5.3:-43051778 | None:intergenic |
| AGACACACCCGCCATTCCCC+AGG | 0.573342 | 5.3:+43052403 | MS.gene053913:CDS |
| TGTAGAGAATGACACACCTT+CGG | 0.575337 | 5.3:+43053790 | MS.gene053913:CDS |
| AGCCAGTCTCCTACTAGAGA+TGG | 0.577237 | 5.3:+43053641 | MS.gene053913:CDS |
| ATTATGTTCAGTTTCTACCA+TGG | 0.577859 | 5.3:-43053441 | None:intergenic |
| ATAATAAACTCGTCAACGAA+AGG | 0.582156 | 5.3:-43051784 | None:intergenic |
| TCCAGACAATTCATCTGAGG+AGG | 0.583627 | 5.3:-43053374 | None:intergenic |
| AAGGTTGTAAAAGAGTGGCC+TGG | 0.594766 | 5.3:+43051670 | MS.gene053913:intron |
| AGCAAAAGATGATCTATCCA+TGG | 0.596236 | 5.3:+43053424 | MS.gene053913:CDS |
| GTGATCCGGAAAATGTTACA+TGG | 0.597855 | 5.3:+43050533 | MS.gene053913:CDS |
| ATGCAGACCATCATGGCTAG+TGG | 0.599353 | 5.3:+43050465 | MS.gene053913:intron |
| CAACAGCAGCAAGTCAAACT+GGG | 0.602243 | 5.3:+43052248 | MS.gene053913:CDS |
| TATATGAGTAGTGCAGGAGG+AGG | 0.609676 | 5.3:+43052128 | MS.gene053913:CDS |
| TGGCACTTGCTTGCAAAATG+TGG | 0.618127 | 5.3:+43051739 | MS.gene053913:CDS |
| TAGAAACTGAACATAATGAA+GGG | 0.620128 | 5.3:+43053447 | MS.gene053913:CDS |
| TCATCCAGACAATTCATCTG+AGG | 0.620597 | 5.3:-43053377 | None:intergenic |
| TGAGCATAAATAGAAAGGCT+GGG | 0.624006 | 5.3:-43053689 | None:intergenic |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.629598 | 5.3:+43052197 | MS.gene053913:CDS |
| ATTTGATCCATCTGATCAGG+AGG | 0.636045 | 5.3:+43051711 | MS.gene053913:CDS |
| AATTGCTCTGTGGAAGAAGT+GGG | 0.639626 | 5.3:-43051964 | None:intergenic |
| TACTGTCTTTCACTATAAGG+AGG | 0.644386 | 5.3:-43052359 | None:intergenic |
| ATATCATCTAGGAACAGAAG+AGG | 0.646141 | 5.3:+43052184 | MS.gene053913:CDS |
| ATGGAAAAGCAATCCTACCA+AGG | 0.655385 | 5.3:+43050552 | MS.gene053913:CDS |
| CTGTATATGAGTAGTGCAGG+AGG | 0.660155 | 5.3:+43052125 | MS.gene053913:CDS |
| AGGCTTATAATACTGGCACT+CGG | 0.668317 | 5.3:+43051988 | MS.gene053913:CDS |
| TATAAGCCTTAATTGCTCTG+TGG | 0.669172 | 5.3:-43051974 | None:intergenic |
| TAAGCCAGTAATCTTGAATG+GGG | 0.669245 | 5.3:+43052073 | MS.gene053913:CDS |
| TGACTTAGTCGAAACTCCGA+AGG | 0.670660 | 5.3:-43053806 | None:intergenic |
| TATAGCATTTGGTTACAACA+AGG | 0.688806 | 5.3:+43053935 | MS.gene053913:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTCAATATTTGTAA+AGG | - | chr5.3:43051147-43051166 | None:intergenic | 15.0% |
| !! | AATTGTTCAATATTTGTAAA+GGG | - | chr5.3:43051146-43051165 | None:intergenic | 15.0% |
| !! | ATTGTTTATAACTATCAATA+TGG | - | chr5.3:43051623-43051642 | None:intergenic | 15.0% |
| !!! | ACATTTTTGTTTATTAATCA+AGG | + | chr5.3:43053194-43053213 | MS.gene053913:intron | 15.0% |
| !!! | TTTTTCTTGATGATTTTTTA+GGG | + | chr5.3:43050646-43050665 | MS.gene053913:intron | 15.0% |
| !! | AAAGCATATATCCTATAAAT+AGG | + | chr5.3:43050776-43050795 | MS.gene053913:intron | 20.0% |
| !! | AACTATCAATATGGTATATA+TGG | - | chr5.3:43051614-43051633 | None:intergenic | 20.0% |
| !! | ATAAACAAAAATGTGTAGAA+TGG | - | chr5.3:43053188-43053207 | None:intergenic | 20.0% |
| !! | ATATATCCTATAAATAGGAA+TGG | + | chr5.3:43050781-43050800 | MS.gene053913:intron | 20.0% |
| !! | ATTAAAATCTAAATACTCAG+TGG | - | chr5.3:43052659-43052678 | None:intergenic | 20.0% |
| !! | TATATCCTATAAATAGGAAT+GGG | + | chr5.3:43050782-43050801 | MS.gene053913:intron | 20.0% |
| !! | TTTGTGTTTATATAGGAATT+TGG | + | chr5.3:43053897-43053916 | MS.gene053913:intron | 20.0% |
| !!! | AACAAGAAAAAATGGTTTTA+AGG | - | chr5.3:43052433-43052452 | None:intergenic | 20.0% |
| !!! | AGGTTTTGTTTTTTTTTTGA+AGG | + | chr5.3:43052744-43052763 | MS.gene053913:intron | 20.0% |
| !!! | CTTTTTCTTGATGATTTTTT+AGG | + | chr5.3:43050645-43050664 | MS.gene053913:intron | 20.0% |
| !!! | TCATTTAAGATAGGTTTTTA+TGG | + | chr5.3:43052695-43052714 | MS.gene053913:intron | 20.0% |
| !!! | TCTTTGATAACAAGAAAAAA+TGG | - | chr5.3:43052441-43052460 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTTCTGTTGTA+AGG | + | chr5.3:43051651-43051670 | MS.gene053913:intron | 20.0% |
| ! | AAAAATACATGATCAGGATT+TGG | + | chr5.3:43052019-43052038 | MS.gene053913:CDS | 25.0% |
| ! | AAAAGCTGAGAAAACTAATT+GGG | + | chr5.3:43052151-43052170 | MS.gene053913:CDS | 25.0% |
| ! | AAAAGGCTGTAAAAAGATTA+TGG | + | chr5.3:43052100-43052119 | MS.gene053913:CDS | 25.0% |
| ! | AAAATACATGATCAGGATTT+GGG | + | chr5.3:43052020-43052039 | MS.gene053913:CDS | 25.0% |
| ! | AATCCATTGTAAGTTAGTTA+AGG | + | chr5.3:43050724-43050743 | MS.gene053913:intron | 25.0% |
| ! | AATGAAAATAATGCTGATGA+TGG | + | chr5.3:43053479-43053498 | MS.gene053913:CDS | 25.0% |
| ! | AATTAGATGGAATAATACTG+CGG | - | chr5.3:43051072-43051091 | None:intergenic | 25.0% |
| ! | AATTCTGTTGGAAAAAGATA+GGG | + | chr5.3:43050934-43050953 | MS.gene053913:intron | 25.0% |
| ! | AGCATTATTAAAGCCATTAA+GGG | - | chr5.3:43053153-43053172 | None:intergenic | 25.0% |
| ! | ATAAAAACTCATTGAGAACA+TGG | - | chr5.3:43053842-43053861 | None:intergenic | 25.0% |
| ! | ATAATACTGCGGTATATTAA+TGG | - | chr5.3:43051061-43051080 | None:intergenic | 25.0% |
| ! | ATAGAACACAAAAATAGATC+AGG | - | chr5.3:43053340-43053359 | None:intergenic | 25.0% |
| ! | ATCCATTGTAAGTTAGTTAA+GGG | + | chr5.3:43050725-43050744 | MS.gene053913:intron | 25.0% |
| ! | ATCTATCAAGTACTAAACTA+TGG | - | chr5.3:43050704-43050723 | None:intergenic | 25.0% |
| ! | ATTGAAAATAATCCTGATGA+TGG | + | chr5.3:43053530-43053549 | MS.gene053913:CDS | 25.0% |
| ! | CTATCTTAAATGATGTCTAA+AGG | - | chr5.3:43052688-43052707 | None:intergenic | 25.0% |
| ! | GAAAAACAAAATTGCAAAAG+AGG | - | chr5.3:43051033-43051052 | None:intergenic | 25.0% |
| ! | TAAAAACTCATTGAGAACAT+GGG | - | chr5.3:43053841-43053860 | None:intergenic | 25.0% |
| ! | TAAATCCCATTCCTATTTAT+AGG | - | chr5.3:43050790-43050809 | None:intergenic | 25.0% |
| ! | TAGAAACTGAACATAATGAA+GGG | + | chr5.3:43053447-43053466 | MS.gene053913:CDS | 25.0% |
| ! | TAGCATTATTAAAGCCATTA+AGG | - | chr5.3:43053154-43053173 | None:intergenic | 25.0% |
| ! | TTATAGTGAAAGACAGTATT+CGG | + | chr5.3:43052364-43052383 | MS.gene053913:CDS | 25.0% |
| !! | AACCAAAATTAAAAGTGCAT+CGG | + | chr5.3:43050504-43050523 | MS.gene053913:CDS | 25.0% |
| !! | AATCCTGATCATGTATTTTT+CGG | - | chr5.3:43052019-43052038 | None:intergenic | 25.0% |
| !! | ACGCATTTTTGTGTTTATAT+AGG | + | chr5.3:43053890-43053909 | MS.gene053913:intron | 25.0% |
| !! | CTTTAGACATCATTTAAGAT+AGG | + | chr5.3:43052686-43052705 | MS.gene053913:intron | 25.0% |
| !!! | CTAATTTTGGATTTGCTATA+AGG | + | chr5.3:43053245-43053264 | MS.gene053913:intron | 25.0% |
| !!! | TAGGAGGGAAATTTTTTTTT+TGG | - | chr5.3:43052888-43052907 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGGTACATTGTTA+TGG | + | chr5.3:43050659-43050678 | MS.gene053913:intron | 25.0% |
| !!! | TTTTTTCCTAAGACATTTGT+AGG | - | chr5.3:43051511-43051530 | None:intergenic | 25.0% |
| !!! | TTTTTTTGAAGGATGAGAAA+AGG | + | chr5.3:43052755-43052774 | MS.gene053913:intron | 25.0% |
| AAATGGTCTATCATTAGACT+TGG | + | chr5.3:43051299-43051318 | MS.gene053913:intron | 30.0% | |
| AACACACAAAACAACTTGTA+AGG | - | chr5.3:43053107-43053126 | None:intergenic | 30.0% | |
| AATCTAAATACTCAGTGGTT+TGG | - | chr5.3:43052654-43052673 | None:intergenic | 30.0% | |
| AATCTGTTGTTACATCAGTT+GGG | + | chr5.3:43051396-43051415 | MS.gene053913:intron | 30.0% | |
| AGTTAGTTAAGGGGTTATAT+AGG | + | chr5.3:43050735-43050754 | MS.gene053913:intron | 30.0% | |
| ATAATAAACTCGTCAACGAA+AGG | - | chr5.3:43051787-43051806 | None:intergenic | 30.0% | |
| ATCTAATCCATCAATTCTGT+TGG | + | chr5.3:43050922-43050941 | MS.gene053913:intron | 30.0% | |
| ATTACTCTTGAAGTGAATGA+TGG | + | chr5.3:43051805-43051824 | MS.gene053913:CDS | 30.0% | |
| ATTATGTTCAGTTTCTACCA+TGG | - | chr5.3:43053444-43053463 | None:intergenic | 30.0% | |
| CAATAGTATGCTGACAATTT+GGG | - | chr5.3:43050582-43050601 | None:intergenic | 30.0% | |
| CAATTCTGTTGGAAAAAGAT+AGG | + | chr5.3:43050933-43050952 | MS.gene053913:intron | 30.0% | |
| CTTTCTGTAGTATCTTTCTT+CGG | + | chr5.3:43052994-43053013 | MS.gene053913:intron | 30.0% | |
| GAAAAGCTGAGAAAACTAAT+TGG | + | chr5.3:43052150-43052169 | MS.gene053913:CDS | 30.0% | |
| GAATACTGTCTTTCACTATA+AGG | - | chr5.3:43052365-43052384 | None:intergenic | 30.0% | |
| GCAATTAAGGCTTATAATAC+TGG | + | chr5.3:43051981-43052000 | MS.gene053913:CDS | 30.0% | |
| GGGTTCAAACAAAAATTAGA+TGG | - | chr5.3:43051085-43051104 | None:intergenic | 30.0% | |
| GTAGAAACTGAACATAATGA+AGG | + | chr5.3:43053446-43053465 | MS.gene053913:CDS | 30.0% | |
| GTTATGCATCAATATCATCT+AGG | + | chr5.3:43052173-43052192 | MS.gene053913:CDS | 30.0% | |
| TAAGCTTCAATGAAAATGTC+AGG | + | chr5.3:43051918-43051937 | MS.gene053913:intron | 30.0% | |
| TAGTGAATCACAAAATCTGT+TGG | + | chr5.3:43053568-43053587 | MS.gene053913:CDS | 30.0% | |
| TATAGCATTTGGTTACAACA+AGG | + | chr5.3:43053935-43053954 | MS.gene053913:CDS | 30.0% | |
| TATTAAGTAAGAGATTCCTC+TGG | - | chr5.3:43050365-43050384 | None:intergenic | 30.0% | |
| TCAAACTATCTGGATTCAAA+TGG | + | chr5.3:43051282-43051301 | MS.gene053913:intron | 30.0% | |
| TCAATAGTATGCTGACAATT+TGG | - | chr5.3:43050583-43050602 | None:intergenic | 30.0% | |
| TCCATTGTAAGTTAGTTAAG+GGG | + | chr5.3:43050726-43050745 | MS.gene053913:intron | 30.0% | |
| TTAGTTCCTACAAATGTCTT+AGG | + | chr5.3:43051502-43051521 | MS.gene053913:intron | 30.0% | |
| TTATGAGATCGTTTGAGAAA+AGG | + | chr5.3:43051336-43051355 | MS.gene053913:intron | 30.0% | |
| ! | ACCAAAATTAAAAGTGCATC+GGG | + | chr5.3:43050505-43050524 | MS.gene053913:CDS | 30.0% |
| ! | CTTTTCCATGTAACATTTTC+CGG | - | chr5.3:43050541-43050560 | None:intergenic | 30.0% |
| ! | TCTTTTTCCAACAGAATTGA+TGG | - | chr5.3:43050932-43050951 | None:intergenic | 30.0% |
| ! | TTTCACATCCTCTAGAAATA+TGG | + | chr5.3:43053046-43053065 | MS.gene053913:intron | 30.0% |
| !! | CAAGATAGCTTTATAGCATT+TGG | + | chr5.3:43053924-43053943 | MS.gene053913:CDS | 30.0% |
| !! | GTTTTTAAGCGTGTATTAGA+TGG | + | chr5.3:43051249-43051268 | MS.gene053913:intron | 30.0% |
| !! | TCTTAAAGCCATATTTCTAG+AGG | - | chr5.3:43053057-43053076 | None:intergenic | 30.0% |
| !! | TTAGATTATGTGTGTTGACT+AGG | + | chr5.3:43050398-43050417 | MS.gene053913:intron | 30.0% |
| !! | TTGTTTTGTGTGTTTGAGTT+AGG | + | chr5.3:43053113-43053132 | MS.gene053913:intron | 30.0% |
| !!! | AAATGGTTTTAAGGTTTACC+TGG | - | chr5.3:43052424-43052443 | None:intergenic | 30.0% |
| !!! | AATGGTTTTAAGGTTTACCT+GGG | - | chr5.3:43052423-43052442 | None:intergenic | 30.0% |
| !!! | GAGGGAAATTTTTTTTTTGG+TGG | - | chr5.3:43052885-43052904 | None:intergenic | 30.0% |
| !!! | GGAAATTTTTTTTTTGGTGG+TGG | - | chr5.3:43052882-43052901 | None:intergenic | 30.0% |
| AACCCATCAGTTTACTTAGT+AGG | + | chr5.3:43051100-43051119 | MS.gene053913:intron | 35.0% | |
| AATATTTGTAAAGGGCCACA+TGG | - | chr5.3:43051138-43051157 | None:intergenic | 35.0% | |
| ACATTTGACTCTGCATTTGA+AGG | - | chr5.3:43053773-43053792 | None:intergenic | 35.0% | |
| ACCCATCAGTTTACTTAGTA+GGG | + | chr5.3:43051101-43051120 | MS.gene053913:intron | 35.0% | |
| ACCCCTTAACTAACTTACAA+TGG | - | chr5.3:43050730-43050749 | None:intergenic | 35.0% | |
| ACTAAGCCAGTAATCTTGAA+TGG | + | chr5.3:43052071-43052090 | MS.gene053913:CDS | 35.0% | |
| AGCAAAAGATGATCTATCCA+TGG | + | chr5.3:43053424-43053443 | MS.gene053913:CDS | 35.0% | |
| AGGAATGGGATTTATGTTGA+GGG | + | chr5.3:43050796-43050815 | MS.gene053913:intron | 35.0% | |
| AGGGTACATTGTTATGGAAT+GGG | + | chr5.3:43050665-43050684 | MS.gene053913:intron | 35.0% | |
| AGTTCATGGCAAGTCATAAT+AGG | - | chr5.3:43052477-43052496 | None:intergenic | 35.0% | |
| ATATCATCTAGGAACAGAAG+AGG | + | chr5.3:43052184-43052203 | MS.gene053913:CDS | 35.0% | |
| ATCTTGAATGGGGTTCAAAA+AGG | + | chr5.3:43052083-43052102 | MS.gene053913:CDS | 35.0% | |
| ATTGTAGCTTCAATAGCTTC+AGG | - | chr5.3:43052296-43052315 | None:intergenic | 35.0% | |
| CAAAACAACTTGTAAGGTAC+AGG | - | chr5.3:43053101-43053120 | None:intergenic | 35.0% | |
| CAAATTTGATCCATCTGATC+AGG | + | chr5.3:43051708-43051727 | MS.gene053913:CDS | 35.0% | |
| CAATCTGTTGTTACATCAGT+TGG | + | chr5.3:43051395-43051414 | MS.gene053913:intron | 35.0% | |
| CTAAGCCAGTAATCTTGAAT+GGG | + | chr5.3:43052072-43052091 | MS.gene053913:CDS | 35.0% | |
| CTAGCTGAGCATAAATAGAA+AGG | - | chr5.3:43053697-43053716 | None:intergenic | 35.0% | |
| CTTAGTTTCAATCCACCTAT+AGG | + | chr5.3:43052937-43052956 | MS.gene053913:intron | 35.0% | |
| CTTTCTATTTATGCTCAGCT+AGG | + | chr5.3:43053695-43053714 | MS.gene053913:CDS | 35.0% | |
| GATAATGAGTACTCAGTAGT+AGG | + | chr5.3:43052541-43052560 | MS.gene053913:intron | 35.0% | |
| GATCTCATAATGTCCTATGA+TGG | - | chr5.3:43051326-43051345 | None:intergenic | 35.0% | |
| GATTAGAATCGGAAAAGTCT+TGG | + | chr5.3:43050832-43050851 | MS.gene053913:intron | 35.0% | |
| GTTGTAAGGTTGTAAAAGAG+TGG | + | chr5.3:43051665-43051684 | MS.gene053913:intron | 35.0% | |
| TAAGCCAGTAATCTTGAATG+GGG | + | chr5.3:43052073-43052092 | MS.gene053913:CDS | 35.0% | |
| TAAGGGGTTATATAGGTAGT+TGG | + | chr5.3:43050742-43050761 | MS.gene053913:intron | 35.0% | |
| TACAATCACAAAAGTGGATC+CGG | + | chr5.3:43052310-43052329 | MS.gene053913:CDS | 35.0% | |
| TACTGTCTTTCACTATAAGG+AGG | - | chr5.3:43052362-43052381 | None:intergenic | 35.0% | |
| TAGGAATGGGATTTATGTTG+AGG | + | chr5.3:43050795-43050814 | MS.gene053913:intron | 35.0% | |
| TAGGGTACATTGTTATGGAA+TGG | + | chr5.3:43050664-43050683 | MS.gene053913:intron | 35.0% | |
| TATAAGCCTTAATTGCTCTG+TGG | - | chr5.3:43051977-43051996 | None:intergenic | 35.0% | |
| TCATCTTTACCATCTCTAGT+AGG | - | chr5.3:43053653-43053672 | None:intergenic | 35.0% | |
| TCTTGGTCTCTTGATATCTA+GGG | + | chr5.3:43050849-43050868 | MS.gene053913:intron | 35.0% | |
| TGAAGCTACAATCACAAAAG+TGG | + | chr5.3:43052304-43052323 | MS.gene053913:CDS | 35.0% | |
| TGAGCATAAATAGAAAGGCT+GGG | - | chr5.3:43053692-43053711 | None:intergenic | 35.0% | |
| TGCATAATCTATGCAATGTC+CGG | + | chr5.3:43052842-43052861 | MS.gene053913:intron | 35.0% | |
| TTTAAGCGTGTATTAGATGG+AGG | + | chr5.3:43051252-43051271 | MS.gene053913:intron | 35.0% | |
| TTTCTATATGCAGACCATCA+TGG | + | chr5.3:43050458-43050477 | MS.gene053913:intron | 35.0% | |
| ! | AAATTAGAAGTGTAGCCAAG+TGG | - | chr5.3:43053232-43053251 | None:intergenic | 35.0% |
| ! | ACAAAACCTTTTCTCACTAG+TGG | - | chr5.3:43052733-43052752 | None:intergenic | 35.0% |
| ! | ATTCACTATCCCACCATTTT+TGG | - | chr5.3:43053556-43053575 | None:intergenic | 35.0% |
| ! | CAAAACCTTTTCTCACTAGT+GGG | - | chr5.3:43052732-43052751 | None:intergenic | 35.0% |
| ! | CTTGGCTACACTTCTAATTT+TGG | + | chr5.3:43053232-43053251 | MS.gene053913:intron | 35.0% |
| ! | GGATCAAATTTGACACCTTT+TGG | - | chr5.3:43051700-43051719 | None:intergenic | 35.0% |
| ! | TTGTAAGGTACAGGCTTTTA+AGG | - | chr5.3:43053092-43053111 | None:intergenic | 35.0% |
| !! | ATCGAGAAGTATTGTTTGTG+AGG | + | chr5.3:43050960-43050979 | MS.gene053913:intron | 35.0% |
| !! | CTATAGGTGGATTGAAACTA+AGG | - | chr5.3:43052939-43052958 | None:intergenic | 35.0% |
| !! | TCGAGAAGTATTGTTTGTGA+GGG | + | chr5.3:43050961-43050980 | MS.gene053913:intron | 35.0% |
| !! | TTGACATTTAGCTTGTGAGT+TGG | - | chr5.3:43051431-43051450 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAAGGTTTACCTG+GGG | - | chr5.3:43052422-43052441 | None:intergenic | 35.0% |
| !!! | ATTTTTTTTTTGGTGGTGGC+CGG | - | chr5.3:43052878-43052897 | None:intergenic | 35.0% |
| !!! | TCCCGATGCACTTTTAATTT+TGG | - | chr5.3:43050509-43050528 | None:intergenic | 35.0% |
| AATTGCTCTGTGGAAGAAGT+GGG | - | chr5.3:43051967-43051986 | None:intergenic | 40.0% | |
| ACACTACACACTAGAGTTCA+TGG | - | chr5.3:43052491-43052510 | None:intergenic | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | + | chr5.3:43052197-43052216 | MS.gene053913:CDS | 40.0% | |
| ACCCCTACTAAGTAAACTGA+TGG | - | chr5.3:43051106-43051125 | None:intergenic | 40.0% | |
| ACTTCAACAGTCTCCCTTAA+TGG | + | chr5.3:43053137-43053156 | MS.gene053913:intron | 40.0% | |
| AGATTGCAGGCTAAATAGGT+GGG | - | chr5.3:43051381-43051400 | None:intergenic | 40.0% | |
| AGGAACAGAAGAGGATGAAA+AGG | + | chr5.3:43052193-43052212 | MS.gene053913:CDS | 40.0% | |
| AGGATAGAGGTCAAACTATC+TGG | + | chr5.3:43051272-43051291 | MS.gene053913:intron | 40.0% | |
| AGGCTTATAATACTGGCACT+CGG | + | chr5.3:43051988-43052007 | MS.gene053913:CDS | 40.0% | |
| ATATCCTTCTTCAGATGCTC+TGG | - | chr5.3:43053722-43053741 | None:intergenic | 40.0% | |
| ATGGAAAAGCAATCCTACCA+AGG | + | chr5.3:43050552-43050571 | MS.gene053913:CDS | 40.0% | |
| ATGGGATTTATGTTGAGGGT+AGG | + | chr5.3:43050800-43050819 | MS.gene053913:intron | 40.0% | |
| ATGTCAGGTGTTAAGCAAGA+TGG | + | chr5.3:43051933-43051952 | MS.gene053913:intron | 40.0% | |
| ATTTGATCCATCTGATCAGG+AGG | + | chr5.3:43051711-43051730 | MS.gene053913:CDS | 40.0% | |
| CAAATTACCTCCTGATCAGA+TGG | - | chr5.3:43051721-43051740 | None:intergenic | 40.0% | |
| CAACAGATTGCAGGCTAAAT+AGG | - | chr5.3:43051385-43051404 | None:intergenic | 40.0% | |
| CAGTATTCGGATGTAGATCT+AGG | + | chr5.3:43052377-43052396 | MS.gene053913:CDS | 40.0% | |
| CATAAATAGAAAGGCTGGGT+TGG | - | chr5.3:43053688-43053707 | None:intergenic | 40.0% | |
| CATAATCTATGCAATGTCCG+GGG | + | chr5.3:43052844-43052863 | MS.gene053913:intron | 40.0% | |
| CATCTGATCAGGAGGTAATT+TGG | + | chr5.3:43051719-43051738 | MS.gene053913:CDS | 40.0% | |
| CCCATCAGTTTACTTAGTAG+GGG | + | chr5.3:43051102-43051121 | MS.gene053913:intron | 40.0% | |
| CCCCTACTAAGTAAACTGAT+GGG | - | chr5.3:43051105-43051124 | None:intergenic | 40.0% | |
| CTGAGCATAAATAGAAAGGC+TGG | - | chr5.3:43053693-43053712 | None:intergenic | 40.0% | |
| CTGATGTAACAACAGATTGC+AGG | - | chr5.3:43051394-43051413 | None:intergenic | 40.0% | |
| CTTCTTCCACAGAGCAATTA+AGG | + | chr5.3:43051968-43051987 | MS.gene053913:CDS | 40.0% | |
| GCATAATCTATGCAATGTCC+GGG | + | chr5.3:43052843-43052862 | MS.gene053913:intron | 40.0% | |
| GGAGTTTCGACTAAGTCAAT+TGG | + | chr5.3:43053811-43053830 | MS.gene053913:CDS | 40.0% | |
| GTCTTGGTCTCTTGATATCT+AGG | + | chr5.3:43050848-43050867 | MS.gene053913:intron | 40.0% | |
| GTGATCCGGAAAATGTTACA+TGG | + | chr5.3:43050533-43050552 | MS.gene053913:CDS | 40.0% | |
| GTGTATTAGATGGAGGATAG+AGG | + | chr5.3:43051259-43051278 | MS.gene053913:intron | 40.0% | |
| GTTCTGTATATGAGTAGTGC+AGG | + | chr5.3:43052122-43052141 | MS.gene053913:CDS | 40.0% | |
| TAATTGCTCTGTGGAAGAAG+TGG | - | chr5.3:43051968-43051987 | None:intergenic | 40.0% | |
| TCATCCAGACAATTCATCTG+AGG | - | chr5.3:43053380-43053399 | None:intergenic | 40.0% | |
| TCTGTTGGATTCACAACAAC+TGG | + | chr5.3:43053583-43053602 | MS.gene053913:CDS | 40.0% | |
| TGAACCCCATTCAAGATTAC+TGG | - | chr5.3:43052080-43052099 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAGTTTGTA+GGG | + | chr5.3:43052815-43052834 | MS.gene053913:intron | 40.0% | |
| TGTAGAGAATGACACACCTT+CGG | + | chr5.3:43053790-43053809 | MS.gene053913:CDS | 40.0% | |
| TTAAGCCCACTAGTGAGAAA+AGG | + | chr5.3:43052724-43052743 | MS.gene053913:intron | 40.0% | |
| TTGCTTGCAAAATGTGGTGT+TGG | + | chr5.3:43051745-43051764 | MS.gene053913:CDS | 40.0% | |
| TTTATGTTGAGGGTAGGCAT+TGG | + | chr5.3:43050806-43050825 | MS.gene053913:intron | 40.0% | |
| TTTGCTTGCTCTTCACAATG+AGG | - | chr5.3:43053410-43053429 | None:intergenic | 40.0% | |
| ! | CATTAGACTTGGTCCATCAT+AGG | + | chr5.3:43051310-43051329 | MS.gene053913:intron | 40.0% |
| ! | CTGTTCCATCACACCATTTT+TGG | - | chr5.3:43053505-43053524 | None:intergenic | 40.0% |
| ! | TTTAAGGTTTACCTGGGGAA+TGG | - | chr5.3:43052417-43052436 | None:intergenic | 40.0% |
| !! | ATCCTGATGATGGCCAAAAA+TGG | + | chr5.3:43053540-43053559 | MS.gene053913:CDS | 40.0% |
| !! | ATGCTGATGATGGCCAAAAA+TGG | + | chr5.3:43053489-43053508 | MS.gene053913:CDS | 40.0% |
| !! | CGAGAAGTATTGTTTGTGAG+GGG | + | chr5.3:43050962-43050981 | MS.gene053913:intron | 40.0% |
| !! | GGCATTGGTGAGATTAGAAT+CGG | + | chr5.3:43050821-43050840 | MS.gene053913:intron | 40.0% |
| !! | TGATGATGGCCAAAAATGGT+GGG | + | chr5.3:43053493-43053512 | MS.gene053913:CDS | 40.0% |
| !! | TGGCTTTAAGAGTGCAGATA+AGG | + | chr5.3:43053066-43053085 | MS.gene053913:intron | 40.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+GGG | - | chr5.3:43052877-43052896 | None:intergenic | 40.0% |
| AACTCGTCAACGAAAGGATG+AGG | - | chr5.3:43051781-43051800 | None:intergenic | 45.0% | |
| AAGGTTGTAAAAGAGTGGCC+TGG | + | chr5.3:43051670-43051689 | MS.gene053913:intron | 45.0% | |
| ACAGTACGTACATGCTAGGA+GGG | - | chr5.3:43052903-43052922 | None:intergenic | 45.0% | |
| ACTCATCCTCAAAACTTGCC+AGG | + | chr5.3:43051838-43051857 | MS.gene053913:CDS | 45.0% | |
| ACTCTGCATTTGAAGGCTCA+AGG | - | chr5.3:43053766-43053785 | None:intergenic | 45.0% | |
| ATCCTCAAAACTTGCCAGGT+TGG | + | chr5.3:43051842-43051861 | MS.gene053913:intron | 45.0% | |
| ATGCCGCAATTAAGGCCTAT+AGG | - | chr5.3:43052955-43052974 | None:intergenic | 45.0% | |
| ATTGTTTGTGAGGGGCCATT+TGG | + | chr5.3:43050970-43050989 | MS.gene053913:intron | 45.0% | |
| CAACACAGTACGTACATGCT+AGG | - | chr5.3:43052907-43052926 | None:intergenic | 45.0% | |
| CAACAGCAGCAAGTCAAACT+GGG | + | chr5.3:43052248-43052267 | MS.gene053913:CDS | 45.0% | |
| CAATTCATCTGAGGAGGCTT+CGG | - | chr5.3:43053371-43053390 | None:intergenic | 45.0% | |
| CAGATTGCAGGCTAAATAGG+TGG | - | chr5.3:43051382-43051401 | None:intergenic | 45.0% | |
| CCACCTATAGGCCTTAATTG+CGG | + | chr5.3:43052949-43052968 | MS.gene053913:intron | 45.0% | |
| CTAGCATGTACGTACTGTGT+TGG | + | chr5.3:43052905-43052924 | MS.gene053913:intron | 45.0% | |
| CTGTAGTATCTTTCTTCGGC+TGG | + | chr5.3:43052998-43053017 | MS.gene053913:intron | 45.0% | |
| CTGTATATGAGTAGTGCAGG+AGG | + | chr5.3:43052125-43052144 | MS.gene053913:CDS | 45.0% | |
| CTTTCACTATAAGGAGGCTC+AGG | - | chr5.3:43052356-43052375 | None:intergenic | 45.0% | |
| GATGGCCAAAAATGGTGTGA+TGG | + | chr5.3:43053497-43053516 | MS.gene053913:CDS | 45.0% | |
| GCAAGTCAAACTGGGTGATA+AGG | + | chr5.3:43052256-43052275 | MS.gene053913:CDS | 45.0% | |
| GCGCCGAAAAATACATGATC+AGG | + | chr5.3:43052013-43052032 | MS.gene053913:CDS | 45.0% | |
| GCTCAAAGATGCCGCAATTA+AGG | - | chr5.3:43052963-43052982 | None:intergenic | 45.0% | |
| GTCACAGATTTGGGAGTAAC+CGG | - | chr5.3:43052332-43052351 | None:intergenic | 45.0% | |
| GTGAGCTTAGCTCAGTTTGT+AGG | + | chr5.3:43052814-43052833 | MS.gene053913:intron | 45.0% | |
| TAAAACGCAAGTCACCAACC+TGG | - | chr5.3:43051859-43051878 | None:intergenic | 45.0% | |
| TACCATCTCTAGTAGGAGAC+TGG | - | chr5.3:43053646-43053665 | None:intergenic | 45.0% | |
| TATATGAGTAGTGCAGGAGG+AGG | + | chr5.3:43052128-43052147 | MS.gene053913:CDS | 45.0% | |
| TCCAGACAATTCATCTGAGG+AGG | - | chr5.3:43053377-43053396 | None:intergenic | 45.0% | |
| TGACTTAGTCGAAACTCCGA+AGG | - | chr5.3:43053809-43053828 | None:intergenic | 45.0% | |
| TGGCACTTGCTTGCAAAATG+TGG | + | chr5.3:43051739-43051758 | MS.gene053913:CDS | 45.0% | |
| ! | AGGAGTGTAACATAGCCACT+TGG | + | chr5.3:43053214-43053233 | MS.gene053913:intron | 45.0% |
| ! | CTTTTGTCCACTAGCCATGA+TGG | - | chr5.3:43050475-43050494 | None:intergenic | 45.0% |
| ! | TTGACACCTTTTGGCAAACC+AGG | - | chr5.3:43051691-43051710 | None:intergenic | 45.0% |
| !! | CTGATGATGGCCAAAAATGG+TGG | + | chr5.3:43053492-43053511 | MS.gene053913:CDS | 45.0% |
| !! | TTCTTCCAGTTTTGTGCCAG+CGG | - | chr5.3:43052052-43052071 | None:intergenic | 45.0% |
| !!! | CACCATTTTTGGCCATCATC+AGG | - | chr5.3:43053494-43053513 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | - | chr5.3:43052876-43052895 | None:intergenic | 45.0% |
| AAGGTTTACCTGGGGAATGG+CGG | - | chr5.3:43052414-43052433 | None:intergenic | 50.0% | |
| AGCCAGTCTCCTACTAGAGA+TGG | + | chr5.3:43053641-43053660 | MS.gene053913:CDS | 50.0% | |
| AGGCTCAGGAGTCACAGATT+TGG | - | chr5.3:43052342-43052361 | None:intergenic | 50.0% | |
| ATGCAGACCATCATGGCTAG+TGG | + | chr5.3:43050465-43050484 | MS.gene053913:intron | 50.0% | |
| CAAACTGAGCTAAGCTCACG+AGG | - | chr5.3:43052813-43052832 | None:intergenic | 50.0% | |
| CAATTTGGGCAAGCCTTGGT+AGG | - | chr5.3:43050568-43050587 | None:intergenic | 50.0% | |
| CACAGTACGTACATGCTAGG+AGG | - | chr5.3:43052904-43052923 | None:intergenic | 50.0% | |
| CCAACAGCAGCAAGTCAAAC+TGG | + | chr5.3:43052247-43052266 | MS.gene053913:CDS | 50.0% | |
| CCGCAATTAAGGCCTATAGG+TGG | - | chr5.3:43052952-43052971 | None:intergenic | 50.0% | |
| CTCTACCAGACCAAGCCAAA+TGG | - | chr5.3:43050988-43051007 | None:intergenic | 50.0% | |
| CTGACAATTTGGGCAAGCCT+TGG | - | chr5.3:43050572-43050591 | None:intergenic | 50.0% | |
| GCCTCCTCAGATGAATTGTC+TGG | + | chr5.3:43053373-43053392 | MS.gene053913:intron | 50.0% | |
| GGCTCAGGAGTCACAGATTT+GGG | - | chr5.3:43052341-43052360 | None:intergenic | 50.0% | |
| ! | AGGACCAGAGCATCTGAAGA+AGG | + | chr5.3:43053715-43053734 | MS.gene053913:CDS | 50.0% |
| ! | CACCAACCTGGCAAGTTTTG+AGG | - | chr5.3:43051847-43051866 | None:intergenic | 50.0% |
| !! | AGGGGTTTTTGAGCACCATG+TGG | + | chr5.3:43051120-43051139 | MS.gene053913:intron | 50.0% |
| !! | CCAGTTTGACTTGCTGCTGT+TGG | - | chr5.3:43052250-43052269 | None:intergenic | 50.0% |
| AAGCTCACGAGGACGCTATG+AGG | - | chr5.3:43052802-43052821 | None:intergenic | 55.0% | |
| AATGTCCGGGGTTCAAACCC+CGG | + | chr5.3:43052856-43052875 | MS.gene053913:intron | 55.0% | |
| AGCTCACGAGGACGCTATGA+GGG | - | chr5.3:43052801-43052820 | None:intergenic | 55.0% | |
| AGGTTTACCTGGGGAATGGC+GGG | - | chr5.3:43052413-43052432 | None:intergenic | 55.0% | |
| TTGTGAGGGGCCATTTGGCT+TGG | + | chr5.3:43050975-43050994 | MS.gene053913:intron | 55.0% | |
| ! | GAGTGGCCTGGTTTGCCAAA+AGG | + | chr5.3:43051682-43051701 | MS.gene053913:CDS | 55.0% |
| ! | TGCATCGGGAGCATGTGATC+CGG | + | chr5.3:43050519-43050538 | MS.gene053913:CDS | 55.0% |
| AGGATTTGGGTGACGTCCGC+TGG | + | chr5.3:43052033-43052052 | MS.gene053913:CDS | 60.0% | |
| GACGTCCGCTGGCACAAAAC+TGG | + | chr5.3:43052044-43052063 | MS.gene053913:CDS | 60.0% | |
| !! | AGGGGCCATTTGGCTTGGTC+TGG | + | chr5.3:43050980-43050999 | MS.gene053913:intron | 60.0% |
| AGACACACCCGCCATTCCCC+AGG | + | chr5.3:43052403-43052422 | MS.gene053913:CDS | 65.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | - | chr5.3:43052864-43052883 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 43050351 | 43053968 | 43050351 | ID=MS.gene053913 |
| chr5.3 | mRNA | 43050351 | 43053968 | 43050351 | ID=MS.gene053913.t1;Parent=MS.gene053913 |
| chr5.3 | exon | 43050351 | 43050355 | 43050351 | ID=MS.gene053913.t1.exon1;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43050351 | 43050355 | 43050351 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| chr5.3 | exon | 43050471 | 43050612 | 43050471 | ID=MS.gene053913.t1.exon2;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43050471 | 43050612 | 43050471 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| chr5.3 | exon | 43051673 | 43051859 | 43051673 | ID=MS.gene053913.t1.exon3;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43051673 | 43051859 | 43051673 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| chr5.3 | exon | 43051940 | 43052424 | 43051940 | ID=MS.gene053913.t1.exon4;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43051940 | 43052424 | 43051940 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| chr5.3 | exon | 43053374 | 43053832 | 43053374 | ID=MS.gene053913.t1.exon5;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43053374 | 43053832 | 43053374 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| chr5.3 | exon | 43053912 | 43053968 | 43053912 | ID=MS.gene053913.t1.exon6;Parent=MS.gene053913.t1 |
| chr5.3 | CDS | 43053912 | 43053968 | 43053912 | ID=cds.MS.gene053913.t1;Parent=MS.gene053913.t1 |
| Gene Sequence |
| Protein sequence |
