AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054190.t1 MTR_6g047570 77.914 326 31 5 1 299 23 334 5.31e-175 487
MS.gene054190.t1 MTR_0250s0040 65.677 303 60 5 1 299 1 263 1.71e-132 377
MS.gene054190.t1 MTR_0011s0260 60.117 341 89 4 1 299 23 358 8.14e-132 379
MS.gene054190.t1 MTR_0011s0210 59.531 341 91 4 1 299 23 358 1.68e-129 373
MS.gene054190.t1 MTR_4g067010 60.703 313 92 8 1 299 24 319 2.01e-118 343
MS.gene054190.t1 MTR_4g066460 58.559 333 73 6 1 298 24 326 1.99e-116 338
MS.gene054190.t1 MTR_6g047550 75.000 232 26 5 1 202 23 252 3.66e-107 313
MS.gene054190.t1 MTR_4g066380 61.146 314 95 7 1 299 23 324 1.87e-106 313
MS.gene054190.t1 MTR_0246s0020 54.622 357 101 8 1 299 24 377 1.17e-105 313
MS.gene054190.t1 MTR_0246s0050 50.305 328 123 9 1 299 3 319 3.97e-95 284
MS.gene054190.t1 MTR_4g098035 50.305 328 123 9 1 299 24 340 9.88e-95 283
MS.gene054190.t1 MTR_0246s0020 51.282 351 108 9 1 293 24 369 2.56e-90 273
MS.gene054190.t1 MTR_5g014520 42.675 314 146 9 3 299 36 332 2.24e-60 195
MS.gene054190.t1 MTR_5g014560 51.500 200 86 4 107 299 111 306 6.03e-58 188
MS.gene054190.t1 MTR_4g009540 41.667 240 122 5 74 297 94 331 4.77e-52 174
MS.gene054190.t1 MTR_2g010450 44.000 200 97 4 108 299 161 353 1.04e-45 158
MS.gene054190.t1 MTR_4g009540 41.553 219 110 5 74 276 94 310 1.70e-44 154
MS.gene054190.t1 MTR_4g097920 43.860 171 92 2 122 291 138 305 2.01e-44 153
MS.gene054190.t1 MTR_4g092700 42.857 217 111 4 89 299 124 333 2.29e-44 154
MS.gene054190.t1 MTR_4g097920 43.605 172 93 2 121 291 152 320 3.53e-44 153
MS.gene054190.t1 MTR_2g104490 42.786 201 108 4 96 291 104 302 1.95e-43 151
MS.gene054190.t1 MTR_4g009110 37.295 244 131 5 74 297 109 350 4.07e-43 151
MS.gene054190.t1 MTR_5g014600 39.095 243 126 6 68 296 100 334 5.80e-43 150
MS.gene054190.t1 MTR_4g097950 46.429 196 90 5 114 298 60 251 1.00e-42 147
MS.gene054190.t1 MTR_4g097940 43.605 172 93 3 121 291 152 320 1.62e-42 149
MS.gene054190.t1 MTR_2g104550 43.750 208 105 7 98 296 107 311 9.26e-41 144
MS.gene054190.t1 MTR_8g009020 35.124 242 132 6 79 297 84 323 3.02e-37 135
MS.gene054190.t1 MTR_2g104490 41.935 186 101 4 96 276 104 287 2.40e-36 132
MS.gene054190.t1 MTR_7g080780 40.104 192 105 3 101 292 130 311 3.86e-36 132
MS.gene054190.t1 MTR_7g080780 40.104 192 105 3 101 292 143 324 3.98e-36 132
MS.gene054190.t1 MTR_2g104560 34.454 238 134 7 70 298 2 226 9.40e-36 128
MS.gene054190.t1 MTR_5g014640 41.379 174 99 2 119 292 149 319 3.33e-35 129
MS.gene054190.t1 MTR_2g104650 35.849 265 148 7 46 295 10 267 1.68e-33 124
MS.gene054190.t1 MTR_2g104530 38.095 168 100 1 125 292 106 269 2.99e-30 115
MS.gene054190.t1 MTR_8g009010 33.766 231 99 5 80 292 73 267 1.19e-29 115
MS.gene054190.t1 MTR_2g104500 34.934 229 131 5 80 297 51 272 3.21e-29 112
MS.gene054190.t1 MTR_8g069740 37.500 176 105 3 104 275 91 265 1.28e-28 110
MS.gene054190.t1 MTR_2g104590 32.735 223 109 7 92 295 22 222 8.58e-28 107
MS.gene054190.t1 MTR_5g014550 46.032 126 60 3 154 275 54 175 8.58e-26 101
MS.gene054190.t1 MTR_4g009510 33.742 163 90 5 135 293 53 201 2.41e-23 95.5
MS.gene054190.t1 MTR_4g009420 34.839 155 69 2 147 294 65 194 1.09e-22 93.6
MS.gene054190.t1 MTR_7g451650 37.838 148 82 4 147 294 57 194 5.79e-22 91.7
MS.gene054190.t1 MTR_7g050350 36.620 142 80 4 153 294 1 132 4.66e-20 84.7
MS.gene054190.t1 MTR_7g451650 36.620 142 80 4 153 294 1 132 4.66e-20 84.7
MS.gene054190.t1 MTR_8g067280 33.333 150 85 3 124 260 462 609 8.76e-16 77.8
MS.gene054190.t1 MTR_4g009420 33.577 137 59 2 147 276 65 176 5.75e-15 72.4
MS.gene054190.t1 MTR_1g072320 28.723 188 105 5 124 291 470 648 1.01e-14 74.7
MS.gene054190.t1 MTR_7g451650 36.923 130 72 4 147 276 57 176 1.02e-14 71.6
MS.gene054190.t1 MTR_8g064700 22.182 275 184 8 17 273 136 398 5.38e-14 72.0
MS.gene054190.t1 MTR_8g024790 30.201 149 83 7 117 253 284 423 2.06e-13 70.5
MS.gene054190.t1 MTR_5g030430 30.625 160 76 4 124 260 493 640 2.08e-13 70.9
MS.gene054190.t1 MTR_3g498695 25.373 201 140 2 97 287 271 471 2.36e-13 70.5
MS.gene054190.t1 MTR_8g027495 50.000 64 32 0 124 187 458 521 4.76e-13 69.7
MS.gene054190.t1 MTR_7g117670 28.571 154 102 2 124 277 402 547 1.11e-12 68.6
MS.gene054190.t1 MTR_8g098275 40.000 80 48 0 108 187 385 464 1.65e-12 68.2
MS.gene054190.t1 MTR_8g098275 40.000 80 48 0 108 187 292 371 1.67e-12 67.8
MS.gene054190.t1 MTR_3g498695 25.373 201 139 3 97 287 271 470 1.80e-12 67.8
MS.gene054190.t1 MTR_8g098275 40.000 80 48 0 108 187 228 307 1.90e-12 67.8
MS.gene054190.t1 MTR_8g024770 30.075 133 74 4 115 233 265 392 2.60e-12 67.4
MS.gene054190.t1 MTR_3g030700 29.677 155 104 2 126 275 198 352 5.10e-12 66.2
MS.gene054190.t1 MTR_7g096350 50.000 54 27 0 124 177 355 408 9.48e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054190.t1 AT4G37850 39.916 238 117 7 68 299 111 328 1.10e-43 152
MS.gene054190.t1 AT4G37850 39.916 238 117 7 68 299 111 328 1.10e-43 152
MS.gene054190.t1 AT2G22760 43.077 195 98 6 114 296 102 295 9.89e-43 149
MS.gene054190.t1 AT2G22750 44.444 189 97 3 109 291 139 325 2.02e-37 135
MS.gene054190.t1 AT2G22750 44.444 189 97 3 109 291 111 297 2.16e-37 135
MS.gene054190.t1 AT2G22750 44.444 189 97 3 109 291 135 321 2.91e-37 135
MS.gene054190.t1 AT2G22760 43.103 174 87 5 114 276 102 274 8.17e-37 133
MS.gene054190.t1 AT2G22750 44.444 189 96 4 109 291 111 296 3.51e-36 132
MS.gene054190.t1 AT2G22750 44.444 189 96 4 109 291 139 324 4.12e-36 132
MS.gene054190.t1 AT2G22770 33.473 239 134 5 73 294 87 317 1.51e-33 125
MS.gene054190.t1 AT5G46760 29.670 182 99 8 124 280 415 592 3.47e-16 79.3
MS.gene054190.t1 AT4G17880 33.333 147 81 4 124 258 416 557 1.15e-15 77.8
MS.gene054190.t1 AT1G32640 33.333 135 85 2 124 255 452 584 1.91e-15 77.0
MS.gene054190.t1 AT1G63650 27.907 172 95 4 124 272 405 570 2.25e-14 73.6
MS.gene054190.t1 AT1G63650 27.907 172 95 4 124 272 405 570 2.25e-14 73.6
MS.gene054190.t1 AT1G63650 27.907 172 95 4 124 272 405 570 2.25e-14 73.6
MS.gene054190.t1 AT5G41315 28.108 185 104 6 113 272 436 616 2.54e-13 70.5
MS.gene054190.t1 AT5G41315 28.108 185 104 6 113 272 439 619 2.69e-13 70.5
MS.gene054190.t1 AT5G41315 28.108 185 104 6 113 272 431 611 2.85e-13 70.5
MS.gene054190.t1 AT1G01260 30.000 150 83 2 124 273 433 560 3.49e-13 70.1
MS.gene054190.t1 AT1G01260 30.000 150 83 2 124 273 433 560 3.49e-13 70.1
MS.gene054190.t1 AT1G01260 30.000 150 83 2 124 273 433 560 3.49e-13 70.1
MS.gene054190.t1 AT2G46510 48.333 60 31 0 124 183 395 454 2.65e-12 67.4
MS.gene054190.t1 AT4G16430 45.902 61 33 0 124 184 320 380 3.16e-12 67.0
MS.gene054190.t1 AT3G26744 29.091 165 107 2 125 279 308 472 5.48e-11 63.5
MS.gene054190.t1 AT3G26744 29.091 165 107 2 125 279 308 472 5.48e-11 63.5
MS.gene054190.t1 AT3G26744 29.091 165 107 2 125 279 308 472 5.48e-11 63.5
MS.gene054190.t1 AT2G16910 30.968 155 85 6 125 257 315 469 9.35e-11 62.8

Find 46 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTAGTAGTGGGTGAATT+TGG 0.150027 6.3:-41768474 None:intergenic
TCAGTTTCAAATTCCATCTT+TGG 0.246525 6.3:+41768443 MS.gene054190:CDS
AATAACAGTGTCTTACCTTT+TGG 0.250719 6.3:+41769085 MS.gene054190:CDS
AATTAGTAGTGGGTGAATTT+GGG 0.256712 6.3:-41768473 None:intergenic
GGGCCTTCTAGTTAAAATTA+TGG 0.305314 6.3:+41769030 MS.gene054190:CDS
CAAGTGGAAGCAAAAGTCTT+AGG 0.312510 6.3:+41768968 MS.gene054190:CDS
TTACTTAATGTACCTTCTTA+AGG 0.323115 6.3:-41768635 None:intergenic
CATCTGTATCAAGGAAATTC+AGG 0.330296 6.3:-41768179 None:intergenic
GACAGCATTGATTGTGTTGT+TGG 0.353641 6.3:+41768935 MS.gene054190:CDS
TACTAATTCCTCACAAAACT+TGG 0.378617 6.3:+41768488 MS.gene054190:CDS
GATGGTGATGAAGAAAGTTT+TGG 0.390876 6.3:-41768408 None:intergenic
TTGTCATCGTTGCAGAGGCC+TGG 0.407480 6.3:-41768896 None:intergenic
ATCGTTGCAGAGGCCTGGTT+TGG 0.420748 6.3:-41768891 None:intergenic
TAGGAAAACATATGTTGATT+CGG 0.438258 6.3:+41768987 MS.gene054190:CDS
CGACATTACTATTATTGCTC+AGG 0.443689 6.3:+41769120 MS.gene054190:CDS
TAATGTACCTTCTTAAGGTT+AGG 0.447983 6.3:-41768630 None:intergenic
AAATTCAGGTTGCTTTCCTC+AGG 0.450905 6.3:-41768165 None:intergenic
TTTGGGGTGTTGTCCAAAGA+TGG 0.491872 6.3:-41768456 None:intergenic
AACTGAAAAGATGATTTAGA+TGG 0.501895 6.3:-41768426 None:intergenic
GGATCCAATGTCAAGAGCAC+AGG 0.507133 6.3:+41769008 MS.gene054190:CDS
AAATTATGGTAGAGATTGAA+AGG 0.513560 6.3:+41769044 MS.gene054190:CDS
CCGATAGTCTTGACCAAACC+AGG 0.516025 6.3:+41768878 MS.gene054190:CDS
GGCCCCTGTGCTCTTGACAT+TGG 0.522418 6.3:-41769012 None:intergenic
TCTTGTTCCTAACCTTAAGA+AGG 0.522439 6.3:+41768623 MS.gene054190:CDS
AAAAGGTCTCGTACTCATCA+TGG 0.528225 6.3:+41768531 MS.gene054190:CDS
TCAGAACTTCATTGCTCTTG+CGG 0.540285 6.3:+41768599 MS.gene054190:CDS
ACTCTACCACATCTGTATCA+AGG 0.544071 6.3:-41768188 None:intergenic
TGAATACAATTTATTTCCTG+AGG 0.546737 6.3:+41768149 MS.gene054190:CDS
CCTGGTTTGGTCAAGACTAT+CGG 0.562604 6.3:-41768878 None:intergenic
AATGCTGTCATCACATGATG+AGG 0.580177 6.3:-41768921 None:intergenic
TCATGGTCAAGATCATATCA+TGG 0.581035 6.3:+41768548 MS.gene054190:CDS
TCGAGGATAGAATCTCCAAA+AGG 0.583129 6.3:-41769100 None:intergenic
ATGCTGTCATCACATGATGA+GGG 0.591118 6.3:-41768920 None:intergenic
ATTAGTAGTGGGTGAATTTG+GGG 0.592448 6.3:-41768472 None:intergenic
GAGTTTCTCTCACATGACAT+AGG 0.592458 6.3:+41768207 MS.gene054190:CDS
GATGAGTTACTAAGAGATGC+GGG 0.594467 6.3:-41768282 None:intergenic
TGTTGGTTTACCATTTCAAG+TGG 0.603001 6.3:+41768952 MS.gene054190:CDS
GATCCAATGTCAAGAGCACA+GGG 0.607017 6.3:+41769009 MS.gene054190:CDS
ACTTCAATGCTGTCATGCGT+AGG 0.616461 6.3:-41769461 None:intergenic
TGATGAGTTACTAAGAGATG+CGG 0.617560 6.3:-41768283 None:intergenic
AGGGGTTGTCATCGTTGCAG+AGG 0.619523 6.3:-41768901 None:intergenic
GAGCAATAATAGTAATGTCG+AGG 0.636001 6.3:-41769117 None:intergenic
GAATTTCCTTGATACAGATG+TGG 0.638336 6.3:+41768182 MS.gene054190:CDS
AGGCTACAACATGAGCATCA+AGG 0.640216 6.3:+41769425 MS.gene054190:CDS
TGCTGTCATCACATGATGAG+GGG 0.701593 6.3:-41768919 None:intergenic
ATCCAATGTCAAGAGCACAG+GGG 0.815243 6.3:+41769010 MS.gene054190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAGAAATATTTTTATTCT+AGG + chr6.3:41769280-41769299 MS.gene054190:intron 10.0%
!!! TTTCACAATTTTTTAATTTT+TGG + chr6.3:41769189-41769208 MS.gene054190:intron 10.0%
!! AAGATTAATATTAAATACAG+TGG - chr6.3:41769379-41769398 None:intergenic 15.0%
!! ATTATATTGAGCAATTATAA+TGG - chr6.3:41769313-41769332 None:intergenic 15.0%
!! ATTGTGAAAAATAATGTTAA+TGG - chr6.3:41769178-41769197 None:intergenic 15.0%
!! TATAATAATAGTAATAGTGA+TGG - chr6.3:41769217-41769236 None:intergenic 15.0%
!!! ATTTTGTTGTCTTTTTATTT+TGG + chr6.3:41769334-41769353 MS.gene054190:intron 15.0%
!!! TTCTTTTTATGAAATAATCT+TGG + chr6.3:41768696-41768715 MS.gene054190:intron 15.0%
! AAATTATGGTAGAGATTGAA+AGG + chr6.3:41769044-41769063 MS.gene054190:CDS 25.0%
! AACTGAAAAGATGATTTAGA+TGG - chr6.3:41768429-41768448 None:intergenic 25.0%
! TACACGATCTTATTATCAAT+AGG - chr6.3:41768673-41768692 None:intergenic 25.0%
! TGAATACAATTTATTTCCTG+AGG + chr6.3:41768149-41768168 MS.gene054190:CDS 25.0%
! TTACTTAATGTACCTTCTTA+AGG - chr6.3:41768638-41768657 None:intergenic 25.0%
! TTTAAATGTAGATAGAGAGA+TGG - chr6.3:41769152-41769171 None:intergenic 25.0%
!! TAGGAAAACATATGTTGATT+CGG + chr6.3:41768987-41769006 MS.gene054190:CDS 25.0%
!!! ATTGTTGTTTGTTTTGTTCT+TGG - chr6.3:41768242-41768261 None:intergenic 25.0%
!!! ATTTTTTTCAGCTCCATATT+TGG - chr6.3:41768354-41768373 None:intergenic 25.0%
!!! CTACCATAATTTTAACTAGA+AGG - chr6.3:41769036-41769055 None:intergenic 25.0%
!!! TGATTTTGATAAGCCAAATA+TGG + chr6.3:41768338-41768357 MS.gene054190:CDS 25.0%
!!! TTTATTTTATAGTTGGGTGA+AGG + chr6.3:41769405-41769424 MS.gene054190:intron 25.0%
AAACAACAATGTTTCACTTC+AGG + chr6.3:41768252-41768271 MS.gene054190:intron 30.0%
AACAACAATGTTTCACTTCA+GGG + chr6.3:41768253-41768272 MS.gene054190:intron 30.0%
TAATGTACCTTCTTAAGGTT+AGG - chr6.3:41768633-41768652 None:intergenic 30.0%
TACTAATTCCTCACAAAACT+TGG + chr6.3:41768488-41768507 MS.gene054190:CDS 30.0%
TCAGTTTCAAATTCCATCTT+TGG + chr6.3:41768443-41768462 MS.gene054190:CDS 30.0%
! AATAACAGTGTCTTACCTTT+TGG + chr6.3:41769085-41769104 MS.gene054190:CDS 30.0%
! TTTTGTGAGGAATTAGTAGT+GGG - chr6.3:41768486-41768505 None:intergenic 30.0%
!! AATTAGTAGTGGGTGAATTT+GGG - chr6.3:41768476-41768495 None:intergenic 30.0%
!! TGAAGAAAGTTTTGGTGAAA+AGG - chr6.3:41768403-41768422 None:intergenic 30.0%
!! TTTTGTTTCCAAGTTTTGTG+AGG - chr6.3:41768499-41768518 None:intergenic 30.0%
CATCTGTATCAAGGAAATTC+AGG - chr6.3:41768182-41768201 None:intergenic 35.0%
CCATTGTGTAACAATCTGTT+AGG + chr6.3:41768751-41768770 MS.gene054190:intron 35.0%
CCTAACAGATTGTTACACAA+TGG - chr6.3:41768754-41768773 None:intergenic 35.0%
CGACATTACTATTATTGCTC+AGG + chr6.3:41769120-41769139 MS.gene054190:CDS 35.0%
GAATTTCCTTGATACAGATG+TGG + chr6.3:41768182-41768201 MS.gene054190:CDS 35.0%
GAGCAATAATAGTAATGTCG+AGG - chr6.3:41769120-41769139 None:intergenic 35.0%
TCATGGTCAAGATCATATCA+TGG + chr6.3:41768548-41768567 MS.gene054190:CDS 35.0%
TCTTGTTCCTAACCTTAAGA+AGG + chr6.3:41768623-41768642 MS.gene054190:CDS 35.0%
TGATGAGTTACTAAGAGATG+CGG - chr6.3:41768286-41768305 None:intergenic 35.0%
TTGTGTAACAATCTGTTAGG+TGG + chr6.3:41768754-41768773 MS.gene054190:intron 35.0%
! ACTTTTGCTTCCACTTGAAA+TGG - chr6.3:41768965-41768984 None:intergenic 35.0%
! GGGCCTTCTAGTTAAAATTA+TGG + chr6.3:41769030-41769049 MS.gene054190:CDS 35.0%
! GTTTTGTGAGGAATTAGTAG+TGG - chr6.3:41768487-41768506 None:intergenic 35.0%
!! ATTAGTAGTGGGTGAATTTG+GGG - chr6.3:41768475-41768494 None:intergenic 35.0%
!! GAATTAGTAGTGGGTGAATT+TGG - chr6.3:41768477-41768496 None:intergenic 35.0%
!! GATGGTGATGAAGAAAGTTT+TGG - chr6.3:41768411-41768430 None:intergenic 35.0%
!! TGTTGGTTTACCATTTCAAG+TGG + chr6.3:41768952-41768971 MS.gene054190:CDS 35.0%
AAAAGGTCTCGTACTCATCA+TGG + chr6.3:41768531-41768550 MS.gene054190:CDS 40.0%
AATGCTGTCATCACATGATG+AGG - chr6.3:41768924-41768943 None:intergenic 40.0%
ACTCTACCACATCTGTATCA+AGG - chr6.3:41768191-41768210 None:intergenic 40.0%
ATGCTGTCATCACATGATGA+GGG - chr6.3:41768923-41768942 None:intergenic 40.0%
CAAAAACCTCAGAGAGCAAA+AGG + chr6.3:41768514-41768533 MS.gene054190:CDS 40.0%
CAAGTGGAAGCAAAAGTCTT+AGG + chr6.3:41768968-41768987 MS.gene054190:CDS 40.0%
GAGTTTCTCTCACATGACAT+AGG + chr6.3:41768207-41768226 MS.gene054190:CDS 40.0%
GATGAGTTACTAAGAGATGC+GGG - chr6.3:41768285-41768304 None:intergenic 40.0%
TCAGAACTTCATTGCTCTTG+CGG + chr6.3:41768599-41768618 MS.gene054190:CDS 40.0%
TCGAGGATAGAATCTCCAAA+AGG - chr6.3:41769103-41769122 None:intergenic 40.0%
!! AAATTCAGGTTGCTTTCCTC+AGG - chr6.3:41768168-41768187 None:intergenic 40.0%
!! GACAGCATTGATTGTGTTGT+TGG + chr6.3:41768935-41768954 MS.gene054190:CDS 40.0%
ACTTCAATGCTGTCATGCGT+AGG - chr6.3:41769464-41769483 None:intergenic 45.0%
AGGCTACAACATGAGCATCA+AGG + chr6.3:41769425-41769444 MS.gene054190:CDS 45.0%
TGCTGTCATCACATGATGAG+GGG - chr6.3:41768922-41768941 None:intergenic 45.0%
! ATCCAATGTCAAGAGCACAG+GGG + chr6.3:41769010-41769029 MS.gene054190:CDS 45.0%
! GATCCAATGTCAAGAGCACA+GGG + chr6.3:41769009-41769028 MS.gene054190:CDS 45.0%
!! CCTGGTTTGGTCAAGACTAT+CGG - chr6.3:41768881-41768900 None:intergenic 45.0%
!! TTTGGGGTGTTGTCCAAAGA+TGG - chr6.3:41768459-41768478 None:intergenic 45.0%
!!! AATTATTTTATTTTATAGTT+GGG + chr6.3:41769399-41769418 MS.gene054190:intron 5.0%
!!! TAATTATTTTATTTTATAGT+TGG + chr6.3:41769398-41769417 MS.gene054190:intron 5.0%
! ACGAGACCTTTTGCTCTCTG+AGG - chr6.3:41768523-41768542 None:intergenic 50.0%
! CCGATAGTCTTGACCAAACC+AGG + chr6.3:41768878-41768897 MS.gene054190:CDS 50.0%
! GGATCCAATGTCAAGAGCAC+AGG + chr6.3:41769008-41769027 MS.gene054190:CDS 50.0%
AGGGGTTGTCATCGTTGCAG+AGG - chr6.3:41768904-41768923 None:intergenic 55.0%
ATCGTTGCAGAGGCCTGGTT+TGG - chr6.3:41768894-41768913 None:intergenic 55.0%
TTGTCATCGTTGCAGAGGCC+TGG - chr6.3:41768899-41768918 None:intergenic 55.0%
GGCCCCTGTGCTCTTGACAT+TGG - chr6.3:41769015-41769034 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 41768144 41769491 41768144 ID=MS.gene054190
chr6.3 mRNA 41768144 41769491 41768144 ID=MS.gene054190.t1;Parent=MS.gene054190
chr6.3 exon 41768144 41768228 41768144 ID=MS.gene054190.t1.exon1;Parent=MS.gene054190.t1
chr6.3 CDS 41768144 41768228 41768144 ID=cds.MS.gene054190.t1;Parent=MS.gene054190.t1
chr6.3 exon 41768274 41768644 41768274 ID=MS.gene054190.t1.exon2;Parent=MS.gene054190.t1
chr6.3 CDS 41768274 41768644 41768274 ID=cds.MS.gene054190.t1;Parent=MS.gene054190.t1
chr6.3 exon 41768773 41769141 41768773 ID=MS.gene054190.t1.exon3;Parent=MS.gene054190.t1
chr6.3 CDS 41768773 41769141 41768773 ID=cds.MS.gene054190.t1;Parent=MS.gene054190.t1
chr6.3 exon 41769417 41769491 41769417 ID=MS.gene054190.t1.exon4;Parent=MS.gene054190.t1
chr6.3 CDS 41769417 41769491 41769417 ID=cds.MS.gene054190.t1;Parent=MS.gene054190.t1
Gene Sequence

>MS.gene054190

ATGGATGAATACAATTTATTTCCTGAGGAAAGCAACCTGAATTTCCTTGATACAGATGTGGTAGAGTTTCTCTCACATGACATAGGTAATGTATTCCAAGAACAAAACAAACAACAATGTTTCACTTCAGGGTGCACTCCCGCATCTCTTAGTAACTCATCAAGTTATGAAACAAATTTGAACTCTTTTGACTTTGATTTTGATAAGCCAAATATGGAGCTGAAAAAAATTGATCATAGCAACAAAATCAATGAAACCTTTTCACCAAAACTTTCTTCATCACCATCTAAATCATCTTTTCAGTTTCAAATTCCATCTTTGGACAACACCCCAAATTCACCCACTACTAATTCCTCACAAAACTTGGAAACAAAAACCTCAGAGAGCAAAAGGTCTCGTACTCATCATGGTCAAGATCATATCATGGCTGAGAGAAAGAGAAGAGAGAAACTCACTCAGAACTTCATTGCTCTTGCGGCTCTTGTTCCTAACCTTAAGAAGGTACATTAAGTAATTCTCTCACTTACCTATTGATAATAAGATCGTGTATTTTTCTTTTTATGAAATAATCTTGGTTACTCTATTTTGTGTCACACTACTCATTGATCCATTGTGTAACAATCTGTTAGGTGGACAAGTATTCTGTATTAGTTGAAACTATCAAATACTTAAAAGAGCTTAAAAAGCGTCTGAAAGTTTTCGAAGAACAAAATGAGAAAACAAAAATAGAGTCACCGATAGTCTTGACCAAACCAGGCCTCTGCAACGATGACAACCCCTCATCATGTGATGACAGCATTGATTGTGTTGTTGGTTTACCATTTCAAGTGGAAGCAAAAGTCTTAGGAAAACATATGTTGATTCGGATCCAATGTCAAGAGCACAGGGGCCTTCTAGTTAAAATTATGGTAGAGATTGAAAGGTTTCAACTATTTGTTATCAATAACAGTGTCTTACCTTTTGGAGATTCTATCCTCGACATTACTATTATTGCTCAGGTATATACCATCTCTCTATCTACATTTAAATTGCCATTAACATTATTTTTCACAATTTTTTAATTTTTGGTGCCATCACTATTACTATTATTATATTGACAAATATTTTTTAATTATTATTATAATTGTTATCATCTTATAAGAAATATTTTTATTCTAGGTTGCTTTCCATTATAATTGCTCAATATAATCATTTTGTTGTCTTTTTATTTTGGTGTTTTTTTATATTATTTACCACTGTATTTAATATTAATCTTAATTATTTTATTTTATAGTTGGGTGAAGGCTACAACATGAGCATCAAGGAACTTGTGAAGAACCTACGCATGACAGCATTGAAGTTTATGTGA
Protein sequence

>MS.gene054190.t1

MDEYNLFPEESNLNFLDTDVVEFLSHDIGCTPASLSNSSSYETNLNSFDFDFDKPNMELKKIDHSNKINETFSPKLSSSPSKSSFQFQIPSLDNTPNSPTTNSSQNLETKTSESKRSRTHHGQDHIMAERKRREKLTQNFIALAALVPNLKKVDKYSVLVETIKYLKELKKRLKVFEEQNEKTKIESPIVLTKPGLCNDDNPSSCDDSIDCVVGLPFQVEAKVLGKHMLIRIQCQEHRGLLVKIMVEIERFQLFVINNSVLPFGDSILDITIIAQLGEGYNMSIKELVKNLRMTALKFM