AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054358

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054358.t1 MTR_6g051425 30.182 275 175 6 50 311 19 289 1.82e-35 138
MS.gene054358.t1 MTR_0856s0010 49.612 129 64 1 46 173 32 160 2.21e-33 126
MS.gene054358.t1 MTR_4g035820 30.068 296 181 12 9 288 39 324 3.75e-23 105
MS.gene054358.t1 MTR_0558s0020 25.260 289 182 8 30 284 8 296 6.04e-22 97.4
MS.gene054358.t1 MTR_1g070355 28.936 235 152 7 54 278 80 309 1.12e-20 97.1
MS.gene054358.t1 MTR_7g446060 50.602 83 41 0 129 211 6 88 4.77e-20 87.4
MS.gene054358.t1 MTR_8g446020 24.576 236 157 4 52 284 39 256 2.95e-17 82.8
MS.gene054358.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 3.17e-17 84.3
MS.gene054358.t1 MTR_6g022070 28.966 145 99 1 338 482 1 141 4.81e-17 83.6
MS.gene054358.t1 MTR_1g008290 32.331 133 88 1 108 240 14 144 7.49e-17 78.6
MS.gene054358.t1 MTR_7g446480 31.395 172 117 1 122 292 143 314 2.51e-16 81.3
MS.gene054358.t1 MTR_7g446510 31.928 166 112 1 128 292 164 329 7.23e-16 80.1
MS.gene054358.t1 MTR_7g446520 25.424 236 163 2 52 286 92 315 9.46e-16 79.7
MS.gene054358.t1 MTR_7g115320 61.111 54 18 1 137 190 9 59 8.75e-15 70.9
MS.gene054358.t1 MTR_1g083640 23.162 272 175 8 18 255 11 282 2.54e-14 74.7
MS.gene054358.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.43e-13 67.4
MS.gene054358.t1 MTR_1g019850 32.331 133 79 4 48 175 70 196 1.56e-13 71.2
MS.gene054358.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 2.64e-13 67.4
MS.gene054358.t1 MTR_5g076070 23.552 259 185 7 23 272 28 282 4.25e-13 70.9
MS.gene054358.t1 MTR_6g090505 25.843 178 129 2 109 283 53 230 3.15e-12 69.3
MS.gene054358.t1 MTR_0402s0040 25.000 180 130 3 47 221 25 204 7.52e-11 65.9
MS.gene054358.t1 MTR_7g074790 24.419 172 110 3 42 210 4 158 8.80e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054358.t1 AT4G15090 32.240 732 459 14 48 771 51 753 1.63e-122 387
MS.gene054358.t1 AT4G15090 32.240 732 459 14 48 771 51 753 1.63e-122 387
MS.gene054358.t1 AT4G15090 32.240 732 459 14 48 771 51 753 1.63e-122 387
MS.gene054358.t1 AT4G15090 32.240 732 459 14 48 771 51 753 1.63e-122 387
MS.gene054358.t1 AT4G15090 32.240 732 459 14 48 771 51 753 1.63e-122 387
MS.gene054358.t1 AT4G38180 32.514 732 441 18 8 705 38 750 2.37e-120 381
MS.gene054358.t1 AT3G22170 29.653 779 472 15 18 770 35 763 1.49e-111 359
MS.gene054358.t1 AT3G22170 29.653 779 472 15 18 770 35 763 1.49e-111 359
MS.gene054358.t1 AT1G76320 32.198 587 374 9 52 633 1 568 1.26e-105 338
MS.gene054358.t1 AT1G76320 32.198 587 374 9 52 633 1 568 4.23e-105 339
MS.gene054358.t1 AT1G76320 32.198 587 374 9 52 633 1 568 4.23e-105 339
MS.gene054358.t1 AT1G76320 32.198 587 374 9 52 633 1 568 4.81e-105 339
MS.gene054358.t1 AT1G52520 33.040 569 360 11 47 607 84 639 2.23e-104 336
MS.gene054358.t1 AT2G27110 31.736 605 360 14 48 640 49 612 1.55e-93 311
MS.gene054358.t1 AT2G27110 31.736 605 360 14 48 640 49 612 1.55e-93 311
MS.gene054358.t1 AT3G06250 33.393 563 323 14 48 606 190 704 5.47e-93 308
MS.gene054358.t1 AT3G06250 33.393 563 323 14 48 606 190 704 5.47e-93 308
MS.gene054358.t1 AT3G06250 33.393 563 323 14 48 606 190 704 5.47e-93 308
MS.gene054358.t1 AT1G80010 32.428 589 354 12 48 610 95 665 1.08e-90 300
MS.gene054358.t1 AT2G27110 34.884 473 285 9 172 640 14 467 1.28e-88 295
MS.gene054358.t1 AT5G18960 31.894 602 355 16 28 622 192 745 1.02e-85 289
MS.gene054358.t1 AT5G18960 31.894 602 355 16 28 622 192 745 1.02e-85 289
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 135 564 5.28e-82 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 135 564 5.83e-82 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 6.42e-82 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 9.49e-82 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 9.49e-82 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.11e-81 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.11e-81 278
MS.gene054358.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.11e-81 278
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.72e-79 271
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.94e-79 271
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.94e-79 271
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.88e-79 271
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.88e-79 271
MS.gene054358.t1 AT4G19990 30.198 606 353 12 51 632 38 597 2.98e-79 271
MS.gene054358.t1 AT4G38170 34.021 388 245 4 221 606 21 399 3.09e-76 257
MS.gene054358.t1 AT4G19990 30.983 539 318 10 104 632 32 526 2.50e-75 258
MS.gene054358.t1 AT1G10240 26.433 628 413 17 1 603 1 604 1.69e-63 225
MS.gene054358.t1 AT1G10240 26.433 628 413 17 1 603 1 604 1.69e-63 225
MS.gene054358.t1 AT5G28530 27.627 590 371 13 46 603 53 618 6.24e-62 221
MS.gene054358.t1 AT5G28530 27.119 590 370 12 46 603 53 614 5.15e-61 218
MS.gene054358.t1 AT5G28530 27.119 590 370 12 46 603 53 614 5.15e-61 218
MS.gene054358.t1 AT5G28530 26.829 328 202 7 290 603 252 555 1.13e-27 119
MS.gene054358.t1 AT5G28530 27.219 169 114 5 46 205 53 221 6.41e-11 66.2
MS.gene054358.t1 AT5G28530 25.915 328 201 6 290 603 252 551 6.34e-27 117
MS.gene054358.t1 AT5G28530 27.219 169 114 5 46 205 53 221 6.77e-11 66.2

Find 155 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 6.1:+23371791 MS.gene054358:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 6.1:-23372953 None:intergenic
GATCGCAAACCCTTGTTTCA+TGG 0.299904 6.1:-23371918 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 6.1:-23372599 None:intergenic
TTGCTTTAAAGAATGGTCTA+TGG 0.333513 6.1:+23372089 MS.gene054358:CDS
GTGTTGACGTTTCGGATTCC+GGG 0.344560 6.1:+23371792 MS.gene054358:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 6.1:+23372723 MS.gene054358:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 6.1:+23371784 MS.gene054358:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 6.1:+23372556 MS.gene054358:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 6.1:+23372157 MS.gene054358:CDS
AGTATTGTGTTGATTTCAAC+GGG 0.389824 6.1:+23373367 MS.gene054358:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 6.1:-23372754 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 6.1:+23373221 MS.gene054358:CDS
ATAACGGTTGCTTTAAAGAA+TGG 0.402331 6.1:+23372082 MS.gene054358:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 6.1:-23373789 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 6.1:+23372761 MS.gene054358:CDS
AAAGGATGATCAATCAATAT+AGG 0.408603 6.1:-23371731 None:intergenic
ACTTCGACAACCGAAACAAT+TGG 0.413255 6.1:-23373909 None:intergenic
ACATTACTTCCTATGTCTGA+TGG 0.423977 6.1:+23374041 MS.gene054358:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 6.1:-23373010 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 6.1:-23372567 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 6.1:-23372015 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 6.1:-23372559 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 6.1:-23372154 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 6.1:+23372923 MS.gene054358:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 6.1:+23374042 MS.gene054358:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 6.1:-23372568 None:intergenic
CCATCAGCTAGCTCTCCGTC+AGG 0.451558 6.1:-23371761 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 6.1:-23373354 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 6.1:+23372668 MS.gene054358:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 6.1:+23372380 MS.gene054358:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 6.1:+23371941 MS.gene054358:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 6.1:+23371942 MS.gene054358:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 6.1:+23373116 MS.gene054358:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 6.1:+23373686 MS.gene054358:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 6.1:+23372743 MS.gene054358:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 6.1:+23372331 MS.gene054358:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 6.1:-23372494 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.475674 6.1:+23372571 MS.gene054358:CDS
CCACACATAGAAAGATTTGA+AGG 0.478166 6.1:+23373582 MS.gene054358:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 6.1:+23373725 MS.gene054358:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 6.1:-23372052 None:intergenic
ATTTGTTGTTTCAAAGGTCC+CGG 0.482096 6.1:-23371810 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 6.1:+23371704 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 6.1:+23372350 MS.gene054358:CDS
TTGAAATTGTCTCTCGATTG+TGG 0.489013 6.1:-23373193 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 6.1:-23371907 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 6.1:-23374102 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 6.1:+23373809 MS.gene054358:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 6.1:-23373322 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 6.1:+23371908 MS.gene054358:CDS
TGTATGAAGAAATGATCAAA+TGG 0.501577 6.1:+23373670 MS.gene054358:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 6.1:-23371857 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 6.1:+23372957 MS.gene054358:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 6.1:-23372034 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 6.1:-23373217 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 6.1:-23372345 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 6.1:+23372647 MS.gene054358:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 6.1:+23373467 MS.gene054358:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 6.1:+23372678 MS.gene054358:CDS
GACAACATTTGTTGTTTCAA+AGG 0.508809 6.1:-23371816 None:intergenic
TCGGTTACAATTCCCATTGG+AGG 0.511504 6.1:-23372691 None:intergenic
TCTGATGGGTTTCAAGCGTC+CGG 0.512219 6.1:+23374056 MS.gene054358:CDS
TTACGAAAATCTAACATTTG+TGG 0.512305 6.1:+23372285 MS.gene054358:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 6.1:+23372222 MS.gene054358:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 6.1:+23372259 MS.gene054358:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 6.1:+23372309 MS.gene054358:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 6.1:+23372467 MS.gene054358:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 6.1:+23372332 MS.gene054358:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 6.1:-23373227 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 6.1:-23373582 None:intergenic
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 6.1:-23372383 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 6.1:+23373687 MS.gene054358:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 6.1:+23372246 MS.gene054358:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 6.1:-23372031 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 6.1:+23372221 MS.gene054358:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 6.1:+23373366 MS.gene054358:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 6.1:-23374103 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 6.1:+23372381 MS.gene054358:CDS
TGATCGGTTACAATTCCCAT+TGG 0.541217 6.1:-23372694 None:intergenic
CATCAGCTAGCTCTCCGTCA+GGG 0.541329 6.1:-23371760 None:intergenic
CTGCATAGCCTTGCACTGAT+CGG 0.542185 6.1:-23372710 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 6.1:+23372423 MS.gene054358:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 6.1:+23372066 MS.gene054358:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 6.1:+23371845 MS.gene054358:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 6.1:+23373414 MS.gene054358:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 6.1:-23373226 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 6.1:+23371989 MS.gene054358:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 6.1:+23372487 MS.gene054358:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 6.1:+23372340 MS.gene054358:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 6.1:+23373723 MS.gene054358:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 6.1:+23373720 MS.gene054358:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 6.1:-23372644 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 6.1:+23371950 MS.gene054358:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.562336 6.1:+23373724 MS.gene054358:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 6.1:+23373496 MS.gene054358:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 6.1:+23373243 MS.gene054358:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 6.1:-23372638 None:intergenic
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 6.1:+23372679 MS.gene054358:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 6.1:+23372749 MS.gene054358:CDS
TTGTTGGTGTCAATCATCAT+GGG 0.576932 6.1:+23372572 MS.gene054358:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 6.1:+23373281 MS.gene054358:CDS
ATCAGCTAGCTCTCCGTCAG+GGG 0.582853 6.1:-23371759 None:intergenic
TCAGACATAGGAAGTAATGT+AGG 0.589454 6.1:-23374038 None:intergenic
TTGTGTGTATGATTCTCTGC+GGG 0.590009 6.1:+23372858 MS.gene054358:CDS
GGATGATCAATCAATATAGG+AGG 0.595517 6.1:-23371728 None:intergenic
CATTTCTTCATACAAATCAG+AGG 0.596809 6.1:-23373661 None:intergenic
GCTTGAAACCCATCAGACAT+AGG 0.602294 6.1:-23374050 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 6.1:+23371909 MS.gene054358:CDS
AAGATACCAAGTCCTTTACC+TGG 0.605756 6.1:+23372632 MS.gene054358:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 6.1:-23374075 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 6.1:+23373107 MS.gene054358:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 6.1:+23373244 MS.gene054358:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 6.1:+23372336 MS.gene054358:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 6.1:-23373837 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 6.1:+23374136 MS.gene054358:CDS
ACCACCGGCATCACATACCA+TGG 0.613048 6.1:-23372263 None:intergenic
AAATGCAACTGTTATCTCGA+AGG 0.615193 6.1:+23373267 MS.gene054358:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 6.1:+23372752 MS.gene054358:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 6.1:+23373163 MS.gene054358:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 6.1:+23372653 MS.gene054358:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 6.1:-23373492 None:intergenic
AATTGTAACCGATCAGTGCA+AGG 0.620761 6.1:+23372702 MS.gene054358:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 6.1:+23372351 MS.gene054358:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 6.1:+23374098 MS.gene054358:CDS
CCTGACGGAGAGCTAGCTGA+TGG 0.623440 6.1:+23371761 MS.gene054358:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 6.1:+23373810 MS.gene054358:CDS
CGGCATCACATACCATGGAA+CGG 0.625469 6.1:-23372258 None:intergenic
TAGCCATGTTTCGAACAACC+AGG 0.627145 6.1:-23372650 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 6.1:-23373177 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 6.1:-23373822 None:intergenic
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 6.1:+23372346 MS.gene054358:CDS
TTTACAGCCACATTGTGGTG+TGG 0.632168 6.1:+23373719 MS.gene054358:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 6.1:+23371943 MS.gene054358:CDS
GGATCATAGCTTAAAGACGA+TGG 0.633198 6.1:+23373746 MS.gene054358:CDS
ATGAGTTTACAGCCACATTG+TGG 0.634509 6.1:+23373714 MS.gene054358:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 6.1:+23372814 MS.gene054358:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 6.1:+23373125 MS.gene054358:CDS
TACAAATCAGAGGTTTGACT+AGG 0.642589 6.1:-23373651 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 6.1:+23372146 MS.gene054358:CDS
TCAGCTAGCTCTCCGTCAGG+GGG 0.662037 6.1:-23371758 None:intergenic
CGGAGAGCTAGCTGATGGTG+CGG 0.662675 6.1:+23371766 MS.gene054358:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 6.1:-23372566 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 6.1:+23373327 MS.gene054358:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 6.1:+23373832 MS.gene054358:CDS
TTATGAAATTGCAGAATGTG+CGG 0.680769 6.1:+23373620 MS.gene054358:CDS
TCATAGCTTAAAGACGATGG+AGG 0.690980 6.1:+23373749 MS.gene054358:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 6.1:-23372530 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 6.1:+23373162 MS.gene054358:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 6.1:-23373726 None:intergenic
ATTGTGTGTATGATTCTCTG+CGG 0.733784 6.1:+23372857 MS.gene054358:CDS
TCCATGGTATGTGATGCCGG+TGG 0.764195 6.1:+23372262 MS.gene054358:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 6.1:+23373010 MS.gene054358:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 6.1:+23372188 MS.gene054358:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 6.1:+23373368 MS.gene054358:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG + chr6.1:23372987-23373006 MS.gene054358:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG - chr6.1:23372985-23373004 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG - chr6.1:23373948-23373967 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG + chr6.1:23372986-23373005 MS.gene054358:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG + chr6.1:23373899-23373918 MS.gene054358:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG + chr6.1:23372904-23372923 MS.gene054358:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG + chr6.1:23372909-23372928 MS.gene054358:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG + chr6.1:23372910-23372929 MS.gene054358:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG + chr6.1:23372796-23372815 MS.gene054358:CDS 25.0%
! AAAGGATGATCAATCAATAT+AGG - chr6.1:23371734-23371753 None:intergenic 25.0%
! TGTATGAAGAAATGATCAAA+TGG + chr6.1:23373670-23373689 MS.gene054358:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG + chr6.1:23372285-23372304 MS.gene054358:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG + chr6.1:23371941-23371960 MS.gene054358:CDS 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG + chr6.1:23371942-23371961 MS.gene054358:CDS 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG + chr6.1:23371862-23371881 MS.gene054358:CDS 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG + chr6.1:23373366-23373385 MS.gene054358:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG - chr6.1:23373801-23373820 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG - chr6.1:23371969-23371988 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG - chr6.1:23373865-23373884 None:intergenic 25.0%
ACACAATACTTAGTTTCGTT+CGG - chr6.1:23373357-23373376 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG + chr6.1:23372146-23372165 MS.gene054358:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG + chr6.1:23373244-23373263 MS.gene054358:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG - chr6.1:23373664-23373683 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG - chr6.1:23373229-23373248 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG - chr6.1:23371860-23371879 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG + chr6.1:23373620-23373639 MS.gene054358:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG - chr6.1:23372497-23372516 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG + chr6.1:23371943-23371962 MS.gene054358:CDS 30.0%
! CTTTTTCTATGAGATTGACA+TGG + chr6.1:23372417-23372436 MS.gene054358:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG + chr6.1:23372450-23372469 MS.gene054358:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG - chr6.1:23372806-23372825 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG + chr6.1:23372991-23373010 MS.gene054358:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG + chr6.1:23372449-23372468 MS.gene054358:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG + chr6.1:23373367-23373386 MS.gene054358:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+TGG + chr6.1:23372082-23372101 MS.gene054358:CDS 30.0%
!! GACAACATTTGTTGTTTCAA+AGG - chr6.1:23371819-23371838 None:intergenic 30.0%
!! GACAATTTTGATAAACGATC+AGG + chr6.1:23372210-23372229 MS.gene054358:CDS 30.0%
!! TTGCTTTAAAGAATGGTCTA+TGG + chr6.1:23372089-23372108 MS.gene054358:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG + chr6.1:23373039-23373058 MS.gene054358:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG - chr6.1:23373571-23373590 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG - chr6.1:23374105-23374124 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG + chr6.1:23372814-23372833 MS.gene054358:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG + chr6.1:23373267-23373286 MS.gene054358:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG + chr6.1:23373687-23373706 MS.gene054358:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG + chr6.1:23374041-23374060 MS.gene054358:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG + chr6.1:23372743-23372762 MS.gene054358:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG - chr6.1:23372533-23372552 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG + chr6.1:23372381-23372400 MS.gene054358:CDS 35.0%
ATTGTGTGTATGATTCTCTG+CGG + chr6.1:23372857-23372876 MS.gene054358:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG + chr6.1:23374042-23374061 MS.gene054358:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG + chr6.1:23373582-23373601 MS.gene054358:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG - chr6.1:23373585-23373604 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG - chr6.1:23373495-23373514 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG + chr6.1:23373496-23373515 MS.gene054358:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG - chr6.1:23371910-23371929 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG + chr6.1:23373243-23373262 MS.gene054358:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG + chr6.1:23371845-23371864 MS.gene054358:CDS 35.0%
GGATGATCAATCAATATAGG+AGG - chr6.1:23371731-23371750 None:intergenic 35.0%
GGATTAAGAATTGGTTGATC+AGG - chr6.1:23373792-23373811 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG - chr6.1:23373230-23373249 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG + chr6.1:23371909-23371928 MS.gene054358:CDS 35.0%
TAAAACCACTAGTTGACTGT+TGG - chr6.1:23374106-23374125 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG - chr6.1:23373654-23373673 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG + chr6.1:23372380-23372399 MS.gene054358:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG - chr6.1:23374041-23374060 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG - chr6.1:23372571-23372590 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG + chr6.1:23372066-23372085 MS.gene054358:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG + chr6.1:23372749-23372768 MS.gene054358:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG - chr6.1:23373196-23373215 None:intergenic 35.0%
! ATCTACATACACCGTTTTAG+AGG + chr6.1:23373311-23373330 MS.gene054358:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG + chr6.1:23372923-23372942 MS.gene054358:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG + chr6.1:23371989-23372008 MS.gene054358:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG + chr6.1:23372595-23372614 MS.gene054358:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG - chr6.1:23373325-23373344 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG + chr6.1:23372947-23372966 MS.gene054358:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG - chr6.1:23372281-23372300 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG - chr6.1:23373513-23373532 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG - chr6.1:23372018-23372037 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG - chr6.1:23373862-23373881 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG - chr6.1:23371813-23371832 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG + chr6.1:23372214-23372233 MS.gene054358:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG + chr6.1:23373368-23373387 MS.gene054358:CDS 35.0%
!! TTGTTGGTGTCAATCATCAT+GGG + chr6.1:23372572-23372591 MS.gene054358:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG + chr6.1:23372571-23372590 MS.gene054358:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG + chr6.1:23372878-23372897 MS.gene054358:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG + chr6.1:23372881-23372900 MS.gene054358:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG - chr6.1:23372602-23372621 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG + chr6.1:23372632-23372651 MS.gene054358:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG + chr6.1:23372702-23372721 MS.gene054358:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG + chr6.1:23372157-23372176 MS.gene054358:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG - chr6.1:23373912-23373931 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG + chr6.1:23372188-23372207 MS.gene054358:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG + chr6.1:23372487-23372506 MS.gene054358:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG - chr6.1:23373220-23373239 None:intergenic 40.0%
ATGAGTTTACAGCCACATTG+TGG + chr6.1:23373714-23373733 MS.gene054358:CDS 40.0%
ATGATTGACACCAACAAACG+GGG - chr6.1:23372569-23372588 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG + chr6.1:23372332-23372351 MS.gene054358:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG + chr6.1:23373686-23373705 MS.gene054358:CDS 40.0%
CGTGAATATGCCATGAAACA+AGG + chr6.1:23371908-23371927 MS.gene054358:CDS 40.0%
GAACAAAAGTTTCCGTTCCA+TGG + chr6.1:23372246-23372265 MS.gene054358:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG - chr6.1:23374078-23374097 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG + chr6.1:23372309-23372328 MS.gene054358:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG - chr6.1:23372055-23372074 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG - chr6.1:23372570-23372589 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG + chr6.1:23372331-23372350 MS.gene054358:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG - chr6.1:23372157-23372176 None:intergenic 40.0%
GGATCATAGCTTAAAGACGA+TGG + chr6.1:23373746-23373765 MS.gene054358:CDS 40.0%
GTACACCCATGACAAGTATA+TGG + chr6.1:23373221-23373240 MS.gene054358:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG - chr6.1:23372037-23372056 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG + chr6.1:23373162-23373181 MS.gene054358:CDS 40.0%
TCATAGCTTAAAGACGATGG+AGG + chr6.1:23373749-23373768 MS.gene054358:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG - chr6.1:23372697-23372716 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG + chr6.1:23374136-23374155 MS.gene054358:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG + chr6.1:23373467-23373486 MS.gene054358:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG - chr6.1:23372647-23372666 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG + chr6.1:23372647-23372666 MS.gene054358:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG - chr6.1:23372386-23372405 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG + chr6.1:23372752-23372771 MS.gene054358:CDS 40.0%
TTGTGTGTATGATTCTCTGC+GGG + chr6.1:23372858-23372877 MS.gene054358:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG + chr6.1:23373916-23373935 MS.gene054358:intron 40.0%
! AGGAATACGAGGCAGATTTT+CGG + chr6.1:23373136-23373155 MS.gene054358:CDS 40.0%
! CATGGGCAATCCATTTTACT+AGG + chr6.1:23372589-23372608 MS.gene054358:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG - chr6.1:23373813-23373832 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG + chr6.1:23372948-23372967 MS.gene054358:CDS 40.0%
!! AGACATGCGCTTTTTGTACT+TGG + chr6.1:23373447-23373466 MS.gene054358:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG - chr6.1:23373122-23373141 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG + chr6.1:23373810-23373829 MS.gene054358:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG + chr6.1:23373809-23373828 MS.gene054358:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG + chr6.1:23373414-23373433 MS.gene054358:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG + chr6.1:23373327-23373346 MS.gene054358:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG + chr6.1:23372877-23372896 MS.gene054358:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG + chr6.1:23373116-23373135 MS.gene054358:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG - chr6.1:23373180-23373199 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG + chr6.1:23373163-23373182 MS.gene054358:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG + chr6.1:23373125-23373144 MS.gene054358:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG - chr6.1:23372757-23372776 None:intergenic 45.0%
CATCCTTTATTACCCCCTGA+CGG + chr6.1:23371746-23371765 MS.gene054358:CDS 45.0%
CTATGAGATTGACATGGACG+AGG + chr6.1:23372423-23372442 MS.gene054358:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG - chr6.1:23372641-23372660 None:intergenic 45.0%
GCTTGAAACCCATCAGACAT+AGG - chr6.1:23374053-23374072 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG - chr6.1:23372034-23372053 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG + chr6.1:23372723-23372742 MS.gene054358:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG + chr6.1:23372653-23372672 MS.gene054358:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG + chr6.1:23372221-23372240 MS.gene054358:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG - chr6.1:23372653-23372672 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG + chr6.1:23374098-23374117 MS.gene054358:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG - chr6.1:23372694-23372713 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG - chr6.1:23372956-23372975 None:intergenic 45.0%
TTACAGCCACATTGTGGTGT+GGG + chr6.1:23373720-23373739 MS.gene054358:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG + chr6.1:23373719-23373738 MS.gene054358:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG + chr6.1:23372957-23372976 MS.gene054358:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG - chr6.1:23373013-23373032 None:intergenic 45.0%
! GATCGCAAACCCTTGTTTCA+TGG - chr6.1:23371921-23371940 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG + chr6.1:23373281-23373300 MS.gene054358:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG + chr6.1:23372956-23372975 MS.gene054358:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG + chr6.1:23372222-23372241 MS.gene054358:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG - chr6.1:23372562-23372581 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG + chr6.1:23372336-23372355 MS.gene054358:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG + chr6.1:23372679-23372698 MS.gene054358:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG + chr6.1:23373010-23373029 MS.gene054358:CDS 50.0%
CGGCATCACATACCATGGAA+CGG - chr6.1:23372261-23372280 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG + chr6.1:23372259-23372278 MS.gene054358:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG + chr6.1:23372761-23372780 MS.gene054358:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG + chr6.1:23373832-23373851 MS.gene054358:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG + chr6.1:23372668-23372687 MS.gene054358:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG + chr6.1:23372678-23372697 MS.gene054358:CDS 50.0%
TCTCCGTCAGGGGGTAATAA+AGG - chr6.1:23371752-23371771 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG + chr6.1:23371950-23371969 MS.gene054358:CDS 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG + chr6.1:23372556-23372575 MS.gene054358:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG + chr6.1:23371791-23371810 MS.gene054358:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG - chr6.1:23372713-23372732 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG - chr6.1:23373840-23373859 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG + chr6.1:23371792-23371811 MS.gene054358:CDS 50.0%
!! TCTGATGGGTTTCAAGCGTC+CGG + chr6.1:23374056-23374075 MS.gene054358:CDS 50.0%
ACCACCGGCATCACATACCA+TGG - chr6.1:23372266-23372285 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG + chr6.1:23372340-23372359 MS.gene054358:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG + chr6.1:23373724-23373743 MS.gene054358:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG - chr6.1:23372348-23372367 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG + chr6.1:23373107-23373126 MS.gene054358:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG + chr6.1:23372346-23372365 MS.gene054358:CDS 55.0%
TCCATGGTATGTGATGCCGG+TGG + chr6.1:23372262-23372281 MS.gene054358:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG + chr6.1:23372467-23372486 MS.gene054358:CDS 55.0%
! ATCAGCTAGCTCTCCGTCAG+GGG - chr6.1:23371762-23371781 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+GGG - chr6.1:23371763-23371782 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG + chr6.1:23371784-23371803 MS.gene054358:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG + chr6.1:23373723-23373742 MS.gene054358:CDS 60.0%
CCTGACGGAGAGCTAGCTGA+TGG + chr6.1:23371761-23371780 MS.gene054358:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG + chr6.1:23372351-23372370 MS.gene054358:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG + chr6.1:23373725-23373744 MS.gene054358:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG - chr6.1:23373825-23373844 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG - chr6.1:23373729-23373748 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG + chr6.1:23372350-23372369 MS.gene054358:CDS 60.0%
! CCATCAGCTAGCTCTCCGTC+AGG - chr6.1:23371764-23371783 None:intergenic 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG + chr6.1:23371766-23371785 MS.gene054358:CDS 60.0%
! TCAGCTAGCTCTCCGTCAGG+GGG - chr6.1:23371761-23371780 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 23371716 23374175 23371716 ID=MS.gene054358
chr6.1 mRNA 23371716 23374175 23371716 ID=MS.gene054358.t1;Parent=MS.gene054358
chr6.1 exon 23371716 23373929 23371716 ID=MS.gene054358.t1.exon1;Parent=MS.gene054358.t1
chr6.1 CDS 23371716 23373929 23371716 ID=cds.MS.gene054358.t1;Parent=MS.gene054358.t1
chr6.1 exon 23374038 23374175 23374038 ID=MS.gene054358.t1.exon2;Parent=MS.gene054358.t1
chr6.1 CDS 23374038 23374175 23374038 ID=cds.MS.gene054358.t1;Parent=MS.gene054358.t1
Gene Sequence

>MS.gene054358

ATGGCTGATGGTCCTCCTATATTGATTGATCATCCTTTATTACCCCCTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGTTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCGATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAATGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCATCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCGCTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGTTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATGAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAAGACGATGGAGGACTCATTATCACAGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene054358.t1

MADGPPILIDHPLLPPDGELADGAARVDVSDSGTFETTNVVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKNGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAVETPSQTSDLYEEMIKWSSKKLGKMSLQPHCGVGGDHSLKTMEDSLSQQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF