Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054418.t1 | XP_003626181.1 | 75 | 904 | 28 | 2 | 1 | 706 | 1 | 904 | 0.00E+00 | 1175.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054418.t1 | Q9SGH2 | 43.1 | 51 | 28 | 1 | 312 | 361 | 1284 | 1334 | 2.6e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054418.t1 | G7KWI7 | 75.0 | 904 | 28 | 2 | 1 | 706 | 1 | 904 | 0.0e+00 | 1175.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054418.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054418.t1 | MTR_7g112410 | 90.801 | 674 | 25 | 3 | 68 | 706 | 233 | 904 | 0.0 | 1246 |
| MS.gene054418.t1 | MTR_7g112410 | 88.889 | 108 | 9 | 1 | 1 | 108 | 1 | 105 | 1.16e-48 | 184 |
| MS.gene054418.t1 | MTR_7g112410 | 89.951 | 617 | 25 | 3 | 68 | 649 | 233 | 847 | 0.0 | 1121 |
| MS.gene054418.t1 | MTR_7g112410 | 88.889 | 108 | 9 | 1 | 1 | 108 | 1 | 105 | 9.22e-49 | 184 |
| MS.gene054418.t1 | MTR_4g110090 | 40.650 | 123 | 68 | 3 | 263 | 381 | 68 | 189 | 6.56e-22 | 100 |
| MS.gene054418.t1 | MTR_4g110090 | 42.424 | 99 | 55 | 1 | 596 | 694 | 513 | 609 | 1.12e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054418.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 9.78e-125 | 392 |
| MS.gene054418.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 9.78e-125 | 392 |
| MS.gene054418.t1 | AT3G05670 | 44.464 | 569 | 244 | 18 | 178 | 706 | 346 | 882 | 9.78e-125 | 392 |
Find 189 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTATATGGCCTGGAATTT+TGG | 0.124200 | 7.4:+4292384 | MS.gene054418:CDS |
| CCTTGAATTGCTCATTCTTA+TGG | 0.185613 | 7.4:-4292311 | None:intergenic |
| TGAATAGCTCTGAAATTAAT+AGG | 0.202869 | 7.4:+4292173 | MS.gene054418:CDS |
| AGATGTGGTTAAAAGTATTT+TGG | 0.206841 | 7.4:+4292993 | MS.gene054418:CDS |
| CTTTCGTCTTCTCTTTCTCT+TGG | 0.260528 | 7.4:-4290868 | None:intergenic |
| CTGCTATTTGTTCTGATGGC+TGG | 0.262892 | 7.4:-4290951 | None:intergenic |
| CACACTTATTGTGTTGGTTT+GGG | 0.278946 | 7.4:+4291743 | MS.gene054418:CDS |
| GGGTCTCCATTCTGCATAAA+TGG | 0.287184 | 7.4:-4292283 | None:intergenic |
| TTCAAGGGGCCCAGTGGTTC+AGG | 0.296545 | 7.4:+4292327 | MS.gene054418:CDS |
| ATTGTCTCAAGATGCTGATT+TGG | 0.302977 | 7.4:+4292564 | MS.gene054418:CDS |
| ACATCAACCTTATCAGATTA+TGG | 0.305141 | 7.4:+4292409 | MS.gene054418:CDS |
| CGATGAGGATTATGTGGTTT+CGG | 0.319604 | 7.4:+4290104 | MS.gene054418:CDS |
| CAACTCAAAGCCTGCCTTCC+CGG | 0.326688 | 7.4:+4291864 | MS.gene054418:CDS |
| ATCCTTGAAGATGCCAATTC+CGG | 0.338850 | 7.4:+4291005 | MS.gene054418:CDS |
| CTTCTAGCAGAGGTCGAAAA+AGG | 0.347985 | 7.4:+4290820 | MS.gene054418:CDS |
| GTGCAGGCTTACTGATTGTT+TGG | 0.350078 | 7.4:-4291442 | None:intergenic |
| ACACACTTATTGTGTTGGTT+TGG | 0.353037 | 7.4:+4291742 | MS.gene054418:CDS |
| TTCAAATACCTGATCACGTT+CGG | 0.363155 | 7.4:-4291501 | None:intergenic |
| GAGAAGTACCTGAAGGTAAT+TGG | 0.364011 | 7.4:+4291768 | MS.gene054418:CDS |
| CTTTCTGCTATTTGTTCTGA+TGG | 0.368521 | 7.4:-4290955 | None:intergenic |
| CTCGCAATCTGAGCCGGAAT+TGG | 0.377934 | 7.4:-4291018 | None:intergenic |
| TTGTCTCAAGATGCTGATTT+GGG | 0.385700 | 7.4:+4292565 | MS.gene054418:CDS |
| CAGGTGATGGCCGGGAAGGC+AGG | 0.388209 | 7.4:-4291874 | None:intergenic |
| TTTCGTCTTCTCTTTCTCTT+GGG | 0.388977 | 7.4:-4290867 | None:intergenic |
| TCCGCTGTTGTTGATCGTGC+AGG | 0.389566 | 7.4:-4291458 | None:intergenic |
| CTGCTGCTGCATGGGTGGAT+TGG | 0.389809 | 7.4:-4292433 | None:intergenic |
| TCTTCACAGTGGTTACGATT+AGG | 0.391290 | 7.4:+4293027 | MS.gene054418:CDS |
| GAGTCCACAAGCAGCGAGTA+TGG | 0.405089 | 7.4:-4292842 | None:intergenic |
| AGCCTGTGAATGCAGCTATA+TGG | 0.405307 | 7.4:+4292371 | MS.gene054418:CDS |
| TCTACAACTGGCAGAACTAT+TGG | 0.405466 | 7.4:+4292121 | MS.gene054418:CDS |
| TAAATCAGATTCTTGAGCTT+GGG | 0.405889 | 7.4:-4291834 | None:intergenic |
| CTCCTGAGTTCTTCTTCAGT+TGG | 0.407979 | 7.4:-4291623 | None:intergenic |
| GTTGATGTCCCCAAAATTCC+AGG | 0.409316 | 7.4:-4292394 | None:intergenic |
| CCCCACATTGAATTAATTGC+TGG | 0.411682 | 7.4:+4292913 | MS.gene054418:CDS |
| TGCTATTTGTTCTGATGGCT+GGG | 0.413685 | 7.4:-4290950 | None:intergenic |
| ACAAGTGCCCGAACGTGATC+AGG | 0.415339 | 7.4:+4291493 | MS.gene054418:CDS |
| GAAGAGTGAGGTGGGAAAAC+AGG | 0.429247 | 7.4:+4291280 | MS.gene054418:CDS |
| GATAGAATGGCCTCTACAAC+TGG | 0.432623 | 7.4:+4292109 | MS.gene054418:CDS |
| GAAGGAGCTTCTCCGATGTC+TGG | 0.435810 | 7.4:+4292004 | MS.gene054418:CDS |
| GAATAGCTCTGAAATTAATA+GGG | 0.439609 | 7.4:+4292174 | MS.gene054418:CDS |
| GTGATTTGAGAAAGAGGGTT+AGG | 0.441305 | 7.4:+4290055 | MS.gene054418:CDS |
| AGAGGAATCTCAAGGAAGAA+AGG | 0.442305 | 7.4:+4291235 | MS.gene054418:CDS |
| GGACAAATGAGTATGATTAA+AGG | 0.442629 | 7.4:+4292937 | MS.gene054418:CDS |
| TTTAAAGATGCCAAAGCAAC+TGG | 0.442699 | 7.4:-4291809 | None:intergenic |
| GAACACATAACGGACTCATA+TGG | 0.444472 | 7.4:-4291656 | None:intergenic |
| ATACTTTCTCGTATATGAAC+AGG | 0.444823 | 7.4:-4291893 | None:intergenic |
| AGAAAGAGAAGACGAAAGAA+TGG | 0.448531 | 7.4:+4290873 | MS.gene054418:CDS |
| AGAAAGAGGGTTAGGTCAAA+GGG | 0.453596 | 7.4:+4290063 | MS.gene054418:CDS |
| GTTCTTATATGTTGAGAACT+TGG | 0.458529 | 7.4:-4292199 | None:intergenic |
| GGCCATATAGCTGCATTCAC+AGG | 0.459434 | 7.4:-4292373 | None:intergenic |
| ATCTCTCCATTTATGCAGAA+TGG | 0.461478 | 7.4:+4292277 | MS.gene054418:CDS |
| GCTTCTCCGATGTCTGGAGG+TGG | 0.461950 | 7.4:+4292010 | MS.gene054418:CDS |
| AGAAGATGAGGATTCGGAAA+AGG | 0.463173 | 7.4:+4290215 | MS.gene054418:CDS |
| TTAAATCAGATTCTTGAGCT+TGG | 0.463615 | 7.4:-4291835 | None:intergenic |
| CCTGCACACACTTATTGTGT+TGG | 0.464630 | 7.4:+4291737 | MS.gene054418:CDS |
| TCTTCTTCTTTGACAGTAGC+GGG | 0.465078 | 7.4:-4292484 | None:intergenic |
| AATAGATCGAGGGCTAAAAC+TGG | 0.465701 | 7.4:+4290264 | MS.gene054418:CDS |
| TTCAGGTTATAGTACTTTCA+AGG | 0.466528 | 7.4:+4292795 | MS.gene054418:intron |
| TCAAATACCTGATCACGTTC+GGG | 0.467441 | 7.4:-4291500 | None:intergenic |
| GAGGACTTGAAGAGTGAGGT+GGG | 0.468611 | 7.4:+4291272 | MS.gene054418:CDS |
| TGGACAATCAGACACATTCC+CGG | 0.469120 | 7.4:-4290133 | None:intergenic |
| CACAGGCTCGTTCGAAAACA+TGG | 0.469763 | 7.4:-4292356 | None:intergenic |
| TGTTTGATCTGCTGCTGCAT+GGG | 0.470031 | 7.4:-4292441 | None:intergenic |
| ATGGTTGAATCCTGAACCAC+TGG | 0.473286 | 7.4:-4292337 | None:intergenic |
| ATGTTTGATCTGCTGCTGCA+TGG | 0.473519 | 7.4:-4292442 | None:intergenic |
| GCAAACGTGATTTGAGAAAG+AGG | 0.473708 | 7.4:+4290049 | MS.gene054418:CDS |
| CTTCTCCGATGTCTGGAGGT+GGG | 0.475968 | 7.4:+4292011 | MS.gene054418:CDS |
| GAGGTGAAGACATCAGGTTC+AGG | 0.479499 | 7.4:-4291919 | None:intergenic |
| GTTTATAGAAGATGAGGATT+CGG | 0.480320 | 7.4:+4290209 | MS.gene054418:CDS |
| GGAATCTCTGCTTACACAAA+GGG | 0.482495 | 7.4:-4291421 | None:intergenic |
| ATGTATGAGGTGAAGACATC+AGG | 0.483949 | 7.4:-4291925 | None:intergenic |
| AGACATCGGAGAAGCTCCTT+CGG | 0.486565 | 7.4:-4292002 | None:intergenic |
| ATGTGGTTTCGGATGATGCC+GGG | 0.487381 | 7.4:+4290115 | MS.gene054418:CDS |
| GAGAAAGAGGGTTAGGTCAA+AGG | 0.488109 | 7.4:+4290062 | MS.gene054418:CDS |
| TGGTTGTAGACCAGTTGCTT+TGG | 0.490683 | 7.4:+4291799 | MS.gene054418:CDS |
| GCTACGTTCAATTGATAGAA+TGG | 0.491112 | 7.4:+4292096 | MS.gene054418:CDS |
| TTTGTAGCTGCTGAACTTGA+CGG | 0.493087 | 7.4:-4292066 | None:intergenic |
| TTCTCCGATGTCTGGAGGTG+GGG | 0.496212 | 7.4:+4292012 | MS.gene054418:CDS |
| GAAAGAGATCAGTCCTGAAA+AGG | 0.496295 | 7.4:+4290973 | MS.gene054418:CDS |
| CCATAAGAATGAGCAATTCA+AGG | 0.500298 | 7.4:+4292311 | MS.gene054418:CDS |
| GATTGGTCCATAATCTGATA+AGG | 0.500628 | 7.4:-4292416 | None:intergenic |
| TCACAGTACCAATTACCTTC+AGG | 0.502598 | 7.4:-4291776 | None:intergenic |
| AAAGGAGCGATTGCAGTCAA+TGG | 0.505261 | 7.4:+4292522 | MS.gene054418:CDS |
| ACAGATGGTAAAGGGAAGAA+AGG | 0.505504 | 7.4:+4290020 | None:intergenic |
| AGCCGGAATTGGCATCTTCA+AGG | 0.506290 | 7.4:-4291007 | None:intergenic |
| ACGATCAACAACAGCGGAAG+AGG | 0.506659 | 7.4:+4291463 | MS.gene054418:CDS |
| TTGATCTGCTGCTGCATGGG+TGG | 0.507527 | 7.4:-4292438 | None:intergenic |
| GTATATGAACAGGTGATGGC+CGG | 0.507755 | 7.4:-4291883 | None:intergenic |
| TTGCTCATTCTTATGGAGAA+GGG | 0.514261 | 7.4:-4292304 | None:intergenic |
| TATGTGGTTTCGGATGATGC+CGG | 0.515722 | 7.4:+4290114 | MS.gene054418:CDS |
| GTGAATGCAGCTATATGGCC+TGG | 0.517468 | 7.4:+4292376 | MS.gene054418:CDS |
| AGATAACTTGCACATTGTAA+AGG | 0.517805 | 7.4:+4292504 | MS.gene054418:CDS |
| GTGGTTACGATTAGGACTTT+AGG | 0.519386 | 7.4:+4293035 | MS.gene054418:CDS |
| GAGGAATCTCAAGGAAGAAA+GGG | 0.523223 | 7.4:+4291236 | MS.gene054418:CDS |
| GGAAAAGGAGGTGATTCAAC+GGG | 0.526113 | 7.4:+4290230 | MS.gene054418:CDS |
| ATCTCAAGGAAGAAAGGGTA+AGG | 0.528597 | 7.4:+4291241 | MS.gene054418:CDS |
| ATTGCTCATTCTTATGGAGA+AGG | 0.529056 | 7.4:-4292305 | None:intergenic |
| CACCGTCTCTCTGATAAAGT+TGG | 0.530129 | 7.4:-4292037 | None:intergenic |
| TCTTCGAATGGAAAATGAAG+TGG | 0.531620 | 7.4:+4291148 | MS.gene054418:CDS |
| TCAAACATTGTCACTGAGGT+TGG | 0.532392 | 7.4:+4292457 | MS.gene054418:CDS |
| AGATGAGGATTCGGAAAAGG+AGG | 0.533006 | 7.4:+4290218 | MS.gene054418:CDS |
| AGAGGACTTGAAGAGTGAGG+TGG | 0.533578 | 7.4:+4291271 | MS.gene054418:CDS |
| GAGGAGAGCTTCTCTTCGAA+TGG | 0.534382 | 7.4:+4291136 | MS.gene054418:CDS |
| CACATTGAATTAATTGCTGG+TGG | 0.534434 | 7.4:+4292916 | MS.gene054418:CDS |
| TTTGGATGGATGTGCGGCTG+AGG | 0.536263 | 7.4:+4290173 | MS.gene054418:CDS |
| TAATTCAATGTGGGGACAGA+CGG | 0.539650 | 7.4:-4292905 | None:intergenic |
| ACTATTGGTGTTTCAGCTAC+CGG | 0.540250 | 7.4:+4292136 | MS.gene054418:CDS |
| TGATGGGTTTATAGAAGATG+AGG | 0.541115 | 7.4:+4290203 | MS.gene054418:CDS |
| ATGGAAGCCTCCAGCACGGA+AGG | 0.541330 | 7.4:+4291199 | MS.gene054418:CDS |
| GCCTCCAGCACGGAAGGGTA+AGG | 0.541396 | 7.4:+4291205 | MS.gene054418:CDS |
| ATCTTCTTCTTTGACAGTAG+CGG | 0.541489 | 7.4:-4292485 | None:intergenic |
| TCCTTACCCTTCCGTGCTGG+AGG | 0.542762 | 7.4:-4291206 | None:intergenic |
| CATAAGAATGAGCAATTCAA+GGG | 0.546538 | 7.4:+4292312 | MS.gene054418:CDS |
| GAAATATAAGAAGGAACTTG+AGG | 0.547708 | 7.4:+4291117 | MS.gene054418:CDS |
| CGAGGGCTAAAACTGGTGTA+AGG | 0.548094 | 7.4:+4290271 | MS.gene054418:CDS |
| TCTAGACTCGCAATCTGAGC+CGG | 0.548400 | 7.4:-4291024 | None:intergenic |
| CCAACACAATAAGTGTGTGC+AGG | 0.549150 | 7.4:-4291737 | None:intergenic |
| GATCAGTCCTGAAAAGGAGA+AGG | 0.552181 | 7.4:+4290979 | MS.gene054418:CDS |
| TGGGGACAGACGGATGGTGG+AGG | 0.552215 | 7.4:-4292895 | None:intergenic |
| ATGACACTCTGAACACATAA+CGG | 0.553670 | 7.4:-4291666 | None:intergenic |
| ATGTGTTCAGAGTGTCATCT+AGG | 0.555373 | 7.4:+4291671 | MS.gene054418:CDS |
| TGCTCATTCTTATGGAGAAG+GGG | 0.556205 | 7.4:-4292303 | None:intergenic |
| GAAGGGTAAGGAAAAGATAG+AGG | 0.556670 | 7.4:+4291217 | MS.gene054418:CDS |
| GTGTGAGAACAGATGGTAAA+GGG | 0.557092 | 7.4:+4290012 | None:intergenic |
| CAACACAATAAGTGTGTGCA+GGG | 0.558064 | 7.4:-4291736 | None:intergenic |
| TGATTCCGATGAGGATTATG+TGG | 0.558363 | 7.4:+4290098 | MS.gene054418:CDS |
| CATACCATACTCGCTGCTTG+TGG | 0.558512 | 7.4:+4292838 | MS.gene054418:CDS |
| AGTAGAGGACTTGAAGAGTG+AGG | 0.559366 | 7.4:+4291268 | MS.gene054418:CDS |
| AATAGTTCTGCCAGTTGTAG+AGG | 0.561661 | 7.4:-4292119 | None:intergenic |
| ACACTTATTGTGTTGGTTTG+GGG | 0.561817 | 7.4:+4291744 | MS.gene054418:CDS |
| ATTCAAGTTACTTACTGTAC+CGG | 0.563595 | 7.4:-4292155 | None:intergenic |
| TACAAAAGAATCAAAACAAG+AGG | 0.565655 | 7.4:-4292968 | None:intergenic |
| ACCAGCAATTAATTCAATGT+GGG | 0.568218 | 7.4:-4292914 | None:intergenic |
| ATGTGGGGACAGACGGATGG+TGG | 0.575769 | 7.4:-4292898 | None:intergenic |
| CCTTGACTAAAAGATGTATG+AGG | 0.577067 | 7.4:-4291938 | None:intergenic |
| ATCAGTCCTGAAAAGGAGAA+GGG | 0.579310 | 7.4:+4290980 | MS.gene054418:CDS |
| CAAACGTGATTTGAGAAAGA+GGG | 0.579793 | 7.4:+4290050 | MS.gene054418:CDS |
| ATGAAGATCTACATCAGCAA+TGG | 0.581305 | 7.4:+4291180 | MS.gene054418:CDS |
| AGAACAGGTGAGAGAAGCCG+TGG | 0.582933 | 7.4:+4291085 | MS.gene054418:CDS |
| CGGAAAAGGAGGTGATTCAA+CGG | 0.587891 | 7.4:+4290229 | MS.gene054418:CDS |
| CACCAGCAATTAATTCAATG+TGG | 0.590559 | 7.4:-4292915 | None:intergenic |
| TATATGAACAGGTGATGGCC+GGG | 0.592446 | 7.4:-4291882 | None:intergenic |
| TGACTAAATTTAATAGATCG+AGG | 0.593160 | 7.4:+4290253 | MS.gene054418:CDS |
| TATATTTCCACACAACTCCA+CGG | 0.596331 | 7.4:-4291102 | None:intergenic |
| AGTTGTGTGGAAATATAAGA+AGG | 0.598804 | 7.4:+4291108 | MS.gene054418:CDS |
| ATAGTAAACTCATAATCAGA+TGG | 0.599794 | 7.4:-4291047 | None:intergenic |
| GGAGCTTCTCCGATGTCTGG+AGG | 0.601337 | 7.4:+4292007 | MS.gene054418:CDS |
| GTACTTTCAAGGACATTGCA+AGG | 0.602317 | 7.4:+4292806 | MS.gene054418:CDS |
| TGAACAGGTGATGGCCGGGA+AGG | 0.603021 | 7.4:-4291878 | None:intergenic |
| AGGGTTAGGTCAAAGGGCAG+TGG | 0.607527 | 7.4:+4290069 | MS.gene054418:CDS |
| TGGAATCTCTGCTTACACAA+AGG | 0.608667 | 7.4:-4291422 | None:intergenic |
| TCTCGTATATGAACAGGTGA+TGG | 0.613237 | 7.4:-4291887 | None:intergenic |
| CGAATGGAAAATGAAGTGGT+TGG | 0.613778 | 7.4:+4291152 | MS.gene054418:CDS |
| GAAAAGATAGAGGAATCTCA+AGG | 0.614767 | 7.4:+4291227 | MS.gene054418:CDS |
| GGTGCCCCACCTCCAGACAT+CGG | 0.618253 | 7.4:-4292016 | None:intergenic |
| CGAAACCACATAATCCTCAT+CGG | 0.618800 | 7.4:-4290103 | None:intergenic |
| GACTAAATTTAATAGATCGA+GGG | 0.620528 | 7.4:+4290254 | MS.gene054418:CDS |
| AGCCAACTGAAGAAGAACTC+AGG | 0.620739 | 7.4:+4291621 | MS.gene054418:CDS |
| GTTTCTGCAACTTCTAGCAG+AGG | 0.621858 | 7.4:+4290810 | MS.gene054418:CDS |
| TCAATGTGGGGACAGACGGA+TGG | 0.622245 | 7.4:-4292901 | None:intergenic |
| CACCAACTTTATCAGAGAGA+CGG | 0.623622 | 7.4:+4292035 | MS.gene054418:CDS |
| ATCAACAACAGCGGAAGAGG+CGG | 0.624079 | 7.4:+4291466 | MS.gene054418:CDS |
| AAACTGGTGTAAGGCGTCAG+CGG | 0.637909 | 7.4:+4290280 | MS.gene054418:CDS |
| TGTGTGAGAACAGATGGTAA+AGG | 0.641607 | 7.4:+4290011 | None:intergenic |
| GAGCAATTCAAGGGGCCCAG+TGG | 0.643280 | 7.4:+4292321 | MS.gene054418:CDS |
| TTCTCAACATATAAGAACAC+AGG | 0.644148 | 7.4:+4292204 | MS.gene054418:CDS |
| AGAGAAGCCGTGGAGTTGTG+TGG | 0.645101 | 7.4:+4291095 | MS.gene054418:CDS |
| AGCAATGGAAGCCTCCAGCA+CGG | 0.653022 | 7.4:+4291195 | MS.gene054418:CDS |
| CATATAAGAACACAGGACGT+AGG | 0.654634 | 7.4:+4292211 | MS.gene054418:CDS |
| AAGAGAAGACGAAAGAATGG+AGG | 0.656131 | 7.4:+4290876 | MS.gene054418:CDS |
| TGGAAGCCTCCAGCACGGAA+GGG | 0.661115 | 7.4:+4291200 | MS.gene054418:CDS |
| TGTCATCTAGGTGGAGACGA+TGG | 0.665066 | 7.4:+4291683 | MS.gene054418:CDS |
| TGTTCAGAGTGTCATCTAGG+TGG | 0.667853 | 7.4:+4291674 | MS.gene054418:CDS |
| CCAGCAATTAATTCAATGTG+GGG | 0.670551 | 7.4:-4292913 | None:intergenic |
| CAACTTTATCAGAGAGACGG+TGG | 0.672641 | 7.4:+4292038 | MS.gene054418:CDS |
| GAAGGTAATTGGTACTGTGA+TGG | 0.672974 | 7.4:+4291779 | MS.gene054418:CDS |
| TTGGGGAGAGAAGTACCTGA+AGG | 0.674115 | 7.4:+4291761 | MS.gene054418:CDS |
| TGGTTCTGATGATTCCGATG+AGG | 0.681336 | 7.4:+4290089 | MS.gene054418:CDS |
| TGGTTGAATCCTGAACCACT+GGG | 0.690869 | 7.4:-4292336 | None:intergenic |
| TCAAGAATCTGATTTAAGAG+CGG | 0.691879 | 7.4:+4291841 | MS.gene054418:CDS |
| CAGATCAAACATTGTCACTG+AGG | 0.704891 | 7.4:+4292453 | MS.gene054418:CDS |
| ATAAGAATGAGCAATTCAAG+GGG | 0.716344 | 7.4:+4292313 | MS.gene054418:CDS |
| ATATATCACAGAGTAGCATG+AGG | 0.719343 | 7.4:-4291706 | None:intergenic |
| GAATGTGTCTGATTGTCCAG+AGG | 0.723141 | 7.4:+4290137 | MS.gene054418:CDS |
| AACACAATAAGTGTGTGCAG+GGG | 0.725731 | 7.4:-4291735 | None:intergenic |
| ACTCGAGCACAATACGAGTG+AGG | 0.731655 | 7.4:+4292861 | MS.gene054418:CDS |
| GCCTGCACGATCAACAACAG+CGG | 0.731925 | 7.4:+4291457 | MS.gene054418:CDS |
| GAAAGAATGGAGGATCAACG+AGG | 0.744731 | 7.4:+4290886 | MS.gene054418:CDS |
| ACACAAGAATGTCTTCACAG+TGG | 0.768688 | 7.4:+4293016 | MS.gene054418:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTCTATCATTTATATATCA+TGG | + | chr7.4:4292594-4292613 | MS.gene054418:intron | 20.0% |
| !!! | AATATTTTGATTTTACATGC+AGG | + | chr7.4:4291592-4291611 | MS.gene054418:intron | 20.0% |
| ! | AAATTCTTCGTCTTCATAAA+TGG | - | chr7.4:4290682-4290701 | None:intergenic | 25.0% |
| ! | AGGAAAATAAAAGAAGAGTA+AGG | + | chr7.4:4291324-4291343 | MS.gene054418:intron | 25.0% |
| ! | ATAGTAAACTCATAATCAGA+TGG | - | chr7.4:4291050-4291069 | None:intergenic | 25.0% |
| ! | ATGATACTAGAAATCTGTAA+TGG | + | chr7.4:4292681-4292700 | MS.gene054418:intron | 25.0% |
| ! | CGCATTAAGAAGAAAAATAA+TGG | + | chr7.4:4290750-4290769 | MS.gene054418:intron | 25.0% |
| ! | GAAAATAAAAGAAGAGTAAG+GGG | + | chr7.4:4291326-4291345 | MS.gene054418:intron | 25.0% |
| ! | GACTAAATTTAATAGATCGA+GGG | + | chr7.4:4290254-4290273 | MS.gene054418:CDS | 25.0% |
| ! | GGAAAATAAAAGAAGAGTAA+GGG | + | chr7.4:4291325-4291344 | MS.gene054418:intron | 25.0% |
| ! | TACAAAAGAATCAAAACAAG+AGG | - | chr7.4:4292971-4292990 | None:intergenic | 25.0% |
| ! | TCATCATTCATTACATCATA+AGG | + | chr7.4:4292621-4292640 | MS.gene054418:intron | 25.0% |
| ! | TGACTAAATTTAATAGATCG+AGG | + | chr7.4:4290253-4290272 | MS.gene054418:CDS | 25.0% |
| !!! | AAATTTTGACCATTTGCTTA+TGG | + | chr7.4:4291538-4291557 | MS.gene054418:intron | 25.0% |
| !!! | AGATGTGGTTAAAAGTATTT+TGG | + | chr7.4:4292993-4293012 | MS.gene054418:CDS | 25.0% |
| !!! | GAATAGCTCTGAAATTAATA+GGG | + | chr7.4:4292174-4292193 | MS.gene054418:CDS | 25.0% |
| !!! | TCTTGTTTTGATTCTTTTGT+AGG | + | chr7.4:4292970-4292989 | MS.gene054418:CDS | 25.0% |
| !!! | TGAATAGCTCTGAAATTAAT+AGG | + | chr7.4:4292173-4292192 | MS.gene054418:CDS | 25.0% |
| !!! | TGTCTTTTATGTATTGATTC+AGG | + | chr7.4:4292778-4292797 | MS.gene054418:intron | 25.0% |
| !!! | TTACAGATTTCTAGTATCAT+AGG | - | chr7.4:4292681-4292700 | None:intergenic | 25.0% |
| AAAAATAATGGCACGAAGAT+GGG | + | chr7.4:4290762-4290781 | MS.gene054418:intron | 30.0% | |
| AAAGAAAAACAATCATCCTC+TGG | - | chr7.4:4290156-4290175 | None:intergenic | 30.0% | |
| ACATCAACCTTATCAGATTA+TGG | + | chr7.4:4292409-4292428 | MS.gene054418:CDS | 30.0% | |
| ACCAGCAATTAATTCAATGT+GGG | - | chr7.4:4292917-4292936 | None:intergenic | 30.0% | |
| AGTTGTGTGGAAATATAAGA+AGG | + | chr7.4:4291108-4291127 | MS.gene054418:CDS | 30.0% | |
| ATAAGAATGAGCAATTCAAG+GGG | + | chr7.4:4292313-4292332 | MS.gene054418:CDS | 30.0% | |
| ATACTTTCTCGTATATGAAC+AGG | - | chr7.4:4291896-4291915 | None:intergenic | 30.0% | |
| ATTGCAAAACCATAAGCAAA+TGG | - | chr7.4:4291550-4291569 | None:intergenic | 30.0% | |
| CATAAGAATGAGCAATTCAA+GGG | + | chr7.4:4292312-4292331 | MS.gene054418:CDS | 30.0% | |
| CCATTACTAGAAATCTGTAA+TGG | + | chr7.4:4292650-4292669 | MS.gene054418:intron | 30.0% | |
| GAAATATAAGAAGGAACTTG+AGG | + | chr7.4:4291117-4291136 | MS.gene054418:CDS | 30.0% | |
| GAACAACAAGATGAAGAAAA+AGG | + | chr7.4:4290375-4290394 | MS.gene054418:intron | 30.0% | |
| GGACAAATGAGTATGATTAA+AGG | + | chr7.4:4292937-4292956 | MS.gene054418:CDS | 30.0% | |
| GTTCTTATATGTTGAGAACT+TGG | - | chr7.4:4292202-4292221 | None:intergenic | 30.0% | |
| GTTTATAGAAGATGAGGATT+CGG | + | chr7.4:4290209-4290228 | MS.gene054418:CDS | 30.0% | |
| TAAATCAGATTCTTGAGCTT+GGG | - | chr7.4:4291837-4291856 | None:intergenic | 30.0% | |
| TCAAGAATCTGATTTAAGAG+CGG | + | chr7.4:4291841-4291860 | MS.gene054418:CDS | 30.0% | |
| TGAAGACGAAGAATTTAAAC+CGG | + | chr7.4:4290686-4290705 | MS.gene054418:intron | 30.0% | |
| TTAAATCAGATTCTTGAGCT+TGG | - | chr7.4:4291838-4291857 | None:intergenic | 30.0% | |
| TTCTCAACATATAAGAACAC+AGG | + | chr7.4:4292204-4292223 | MS.gene054418:CDS | 30.0% | |
| ! | AGATAACTTGCACATTGTAA+AGG | + | chr7.4:4292504-4292523 | MS.gene054418:CDS | 30.0% |
| ! | ATTCAAGTTACTTACTGTAC+CGG | - | chr7.4:4292158-4292177 | None:intergenic | 30.0% |
| ! | CTCATACATCTTTTAGTCAA+GGG | + | chr7.4:4291939-4291958 | MS.gene054418:CDS | 30.0% |
| ! | CTTTCATCTTCTAGATTTTC+TGG | + | chr7.4:4291971-4291990 | MS.gene054418:CDS | 30.0% |
| ! | TCAACGAAGATTCTTTTCAT+AGG | - | chr7.4:4292712-4292731 | None:intergenic | 30.0% |
| ! | TTACAATGATGTTGATGAAG+AGG | + | chr7.4:4290452-4290471 | MS.gene054418:intron | 30.0% |
| ! | TTCAGGTTATAGTACTTTCA+AGG | + | chr7.4:4292795-4292814 | MS.gene054418:intron | 30.0% |
| ! | TTTTTGCTTTGCTTGCATTA+TGG | + | chr7.4:4291373-4291392 | MS.gene054418:intron | 30.0% |
| !! | AGAGGATGATTGTTTTTCTT+TGG | + | chr7.4:4290155-4290174 | MS.gene054418:CDS | 30.0% |
| !! | CCATTACAGATTTCTAGTAA+TGG | - | chr7.4:4292653-4292672 | None:intergenic | 30.0% |
| !! | GATGATTGTTTTTCTTTGGA+TGG | + | chr7.4:4290159-4290178 | MS.gene054418:CDS | 30.0% |
| !!! | ACATTTTTTGAGGAGAGATT+AGG | + | chr7.4:4292247-4292266 | MS.gene054418:CDS | 30.0% |
| !!! | ATCCTATCACACATTTTTTG+AGG | + | chr7.4:4292237-4292256 | MS.gene054418:CDS | 30.0% |
| !!! | TGATGATGCTGATGATTTTT+TGG | + | chr7.4:4290920-4290939 | MS.gene054418:CDS | 30.0% |
| AAAGGGTAAGGAAAAAGTAG+AGG | + | chr7.4:4291253-4291272 | MS.gene054418:CDS | 35.0% | |
| AGAAAAAGAAGAAGTGGAAG+TGG | + | chr7.4:4290548-4290567 | MS.gene054418:intron | 35.0% | |
| AGAAAGAGAAGACGAAAGAA+TGG | + | chr7.4:4290873-4290892 | MS.gene054418:CDS | 35.0% | |
| AGAGGAAGAAAAAGAAGAAG+TGG | + | chr7.4:4290542-4290561 | MS.gene054418:intron | 35.0% | |
| ATATATCACAGAGTAGCATG+AGG | - | chr7.4:4291709-4291728 | None:intergenic | 35.0% | |
| ATCTCTCCATTTATGCAGAA+TGG | + | chr7.4:4292277-4292296 | MS.gene054418:CDS | 35.0% | |
| ATCTTCTTCTTTGACAGTAG+CGG | - | chr7.4:4292488-4292507 | None:intergenic | 35.0% | |
| ATGAAGATCTACATCAGCAA+TGG | + | chr7.4:4291180-4291199 | MS.gene054418:CDS | 35.0% | |
| ATGACACTCTGAACACATAA+CGG | - | chr7.4:4291669-4291688 | None:intergenic | 35.0% | |
| ATTGCTCATTCTTATGGAGA+AGG | - | chr7.4:4292308-4292327 | None:intergenic | 35.0% | |
| CAAACGTGATTTGAGAAAGA+GGG | + | chr7.4:4290050-4290069 | MS.gene054418:CDS | 35.0% | |
| CACATTGAATTAATTGCTGG+TGG | + | chr7.4:4292916-4292935 | MS.gene054418:CDS | 35.0% | |
| CACCAGCAATTAATTCAATG+TGG | - | chr7.4:4292918-4292937 | None:intergenic | 35.0% | |
| CCAGCAATTAATTCAATGTG+GGG | - | chr7.4:4292916-4292935 | None:intergenic | 35.0% | |
| CCATAAGAATGAGCAATTCA+AGG | + | chr7.4:4292311-4292330 | MS.gene054418:CDS | 35.0% | |
| CCTTGAATTGCTCATTCTTA+TGG | - | chr7.4:4292314-4292333 | None:intergenic | 35.0% | |
| CCTTGACTAAAAGATGTATG+AGG | - | chr7.4:4291941-4291960 | None:intergenic | 35.0% | |
| CTCCTCAAAAAATGTGTGAT+AGG | - | chr7.4:4292242-4292261 | None:intergenic | 35.0% | |
| GAAAAATAATGGCACGAAGA+TGG | + | chr7.4:4290761-4290780 | MS.gene054418:intron | 35.0% | |
| GAAAAGATAGAGGAATCTCA+AGG | + | chr7.4:4291227-4291246 | MS.gene054418:CDS | 35.0% | |
| GCTACGTTCAATTGATAGAA+TGG | + | chr7.4:4292096-4292115 | MS.gene054418:CDS | 35.0% | |
| GGATGATGAATTTAAACCAG+AGG | + | chr7.4:4290593-4290612 | MS.gene054418:intron | 35.0% | |
| TATATTTCCACACAACTCCA+CGG | - | chr7.4:4291105-4291124 | None:intergenic | 35.0% | |
| TCTTCGAATGGAAAATGAAG+TGG | + | chr7.4:4291148-4291167 | MS.gene054418:CDS | 35.0% | |
| TGTTCTTCTTCTTCTTCTTC+TGG | - | chr7.4:4290360-4290379 | None:intergenic | 35.0% | |
| TTCAAATACCTGATCACGTT+CGG | - | chr7.4:4291504-4291523 | None:intergenic | 35.0% | |
| TTGCTCATTCTTATGGAGAA+GGG | - | chr7.4:4292307-4292326 | None:intergenic | 35.0% | |
| TTTAAAGATGCCAAAGCAAC+TGG | - | chr7.4:4291812-4291831 | None:intergenic | 35.0% | |
| TTTCGTCTTCTCTTTCTCTT+GGG | - | chr7.4:4290870-4290889 | None:intergenic | 35.0% | |
| ! | ACATCTTTTAGTCAAGGGTT+CGG | + | chr7.4:4291944-4291963 | MS.gene054418:CDS | 35.0% |
| ! | ATTGTCTCAAGATGCTGATT+TGG | + | chr7.4:4292564-4292583 | MS.gene054418:CDS | 35.0% |
| ! | CCTCATACATCTTTTAGTCA+AGG | + | chr7.4:4291938-4291957 | MS.gene054418:CDS | 35.0% |
| ! | CTCTGAAGAAGAAAAAGAAC+AGG | + | chr7.4:4291070-4291089 | MS.gene054418:CDS | 35.0% |
| ! | CTTTCTGCTATTTGTTCTGA+TGG | - | chr7.4:4290958-4290977 | None:intergenic | 35.0% |
| ! | GATTGGTCCATAATCTGATA+AGG | - | chr7.4:4292419-4292438 | None:intergenic | 35.0% |
| ! | TGATTCTTTTGTAGGAGATG+TGG | + | chr7.4:4292978-4292997 | MS.gene054418:CDS | 35.0% |
| ! | TTTTTCTTTGGATGGATGTG+CGG | + | chr7.4:4290167-4290186 | MS.gene054418:CDS | 35.0% |
| !! | ACACACTTATTGTGTTGGTT+TGG | + | chr7.4:4291742-4291761 | MS.gene054418:CDS | 35.0% |
| !! | ACACTTATTGTGTTGGTTTG+GGG | + | chr7.4:4291744-4291763 | MS.gene054418:CDS | 35.0% |
| !! | AGAAGAAGGCTTTGAAGAAA+AGG | + | chr7.4:4290787-4290806 | MS.gene054418:intron | 35.0% |
| !! | CACACTTATTGTGTTGGTTT+GGG | + | chr7.4:4291743-4291762 | MS.gene054418:CDS | 35.0% |
| !! | GAAGAAGGCTTTGAAGAAAA+GGG | + | chr7.4:4290788-4290807 | MS.gene054418:intron | 35.0% |
| !! | TGATGGGTTTATAGAAGATG+AGG | + | chr7.4:4290203-4290222 | MS.gene054418:CDS | 35.0% |
| !! | TTGTCTCAAGATGCTGATTT+GGG | + | chr7.4:4292565-4292584 | MS.gene054418:CDS | 35.0% |
| AACACAATAAGTGTGTGCAG+GGG | - | chr7.4:4291738-4291757 | None:intergenic | 40.0% | |
| AAGAGAAGACGAAAGAATGG+AGG | + | chr7.4:4290876-4290895 | MS.gene054418:CDS | 40.0% | |
| AAGGGGCAGAAAGAAGAAAA+AGG | + | chr7.4:4290650-4290669 | MS.gene054418:intron | 40.0% | |
| AATAGATCGAGGGCTAAAAC+TGG | + | chr7.4:4290264-4290283 | MS.gene054418:CDS | 40.0% | |
| ACACAAGAATGTCTTCACAG+TGG | + | chr7.4:4293016-4293035 | MS.gene054418:CDS | 40.0% | |
| AGAAAGAGGGTTAGGTCAAA+GGG | + | chr7.4:4290063-4290082 | MS.gene054418:CDS | 40.0% | |
| AGAAGAAGTGGAAGTGGAAA+TGG | + | chr7.4:4290506-4290525 | MS.gene054418:intron | 40.0% | |
| AGAAGATGAGGATTCGGAAA+AGG | + | chr7.4:4290215-4290234 | MS.gene054418:CDS | 40.0% | |
| AGAAGATTTCACAGATGAGG+AGG | + | chr7.4:4290617-4290636 | MS.gene054418:intron | 40.0% | |
| AGACGAAGAATTTAAACCGG+AGG | + | chr7.4:4290689-4290708 | MS.gene054418:intron | 40.0% | |
| AGAGGAAGAAGTAGAAGAAG+AGG | + | chr7.4:4290404-4290423 | MS.gene054418:intron | 40.0% | |
| AGAGGAATCTCAAGGAAGAA+AGG | + | chr7.4:4291235-4291254 | MS.gene054418:CDS | 40.0% | |
| AGAGGTAGGTGAAAATGATG+AGG | + | chr7.4:4290572-4290591 | MS.gene054418:intron | 40.0% | |
| ATCAGTCCTGAAAAGGAGAA+GGG | + | chr7.4:4290980-4290999 | MS.gene054418:CDS | 40.0% | |
| ATCCTTGAAGATGCCAATTC+CGG | + | chr7.4:4291005-4291024 | MS.gene054418:CDS | 40.0% | |
| ATCTCAAGGAAGAAAGGGTA+AGG | + | chr7.4:4291241-4291260 | MS.gene054418:CDS | 40.0% | |
| ATGAGGAGGAAGAAGAAACA+AGG | + | chr7.4:4290631-4290650 | MS.gene054418:intron | 40.0% | |
| ATGTATGAGGTGAAGACATC+AGG | - | chr7.4:4291928-4291947 | None:intergenic | 40.0% | |
| CAACACAATAAGTGTGTGCA+GGG | - | chr7.4:4291739-4291758 | None:intergenic | 40.0% | |
| CACCAACTTTATCAGAGAGA+CGG | + | chr7.4:4292035-4292054 | MS.gene054418:CDS | 40.0% | |
| CAGATCAAACATTGTCACTG+AGG | + | chr7.4:4292453-4292472 | MS.gene054418:CDS | 40.0% | |
| CATATAAGAACACAGGACGT+AGG | + | chr7.4:4292211-4292230 | MS.gene054418:CDS | 40.0% | |
| CCCCACATTGAATTAATTGC+TGG | + | chr7.4:4292913-4292932 | MS.gene054418:CDS | 40.0% | |
| CGAAACCACATAATCCTCAT+CGG | - | chr7.4:4290106-4290125 | None:intergenic | 40.0% | |
| CGAATGGAAAATGAAGTGGT+TGG | + | chr7.4:4291152-4291171 | MS.gene054418:CDS | 40.0% | |
| CGATGAGGATTATGTGGTTT+CGG | + | chr7.4:4290104-4290123 | MS.gene054418:CDS | 40.0% | |
| CTAATGTAAGTAAAGCCTCG+AGG | + | chr7.4:4290304-4290323 | MS.gene054418:intron | 40.0% | |
| CTTTCGTCTTCTCTTTCTCT+TGG | - | chr7.4:4290871-4290890 | None:intergenic | 40.0% | |
| GAAAGAGATCAGTCCTGAAA+AGG | + | chr7.4:4290973-4290992 | MS.gene054418:CDS | 40.0% | |
| GAAGGGTAAGGAAAAGATAG+AGG | + | chr7.4:4291217-4291236 | MS.gene054418:CDS | 40.0% | |
| GAAGGTAATTGGTACTGTGA+TGG | + | chr7.4:4291779-4291798 | MS.gene054418:CDS | 40.0% | |
| GAGGAATCTCAAGGAAGAAA+GGG | + | chr7.4:4291236-4291255 | MS.gene054418:CDS | 40.0% | |
| GCAAACGTGATTTGAGAAAG+AGG | + | chr7.4:4290049-4290068 | MS.gene054418:CDS | 40.0% | |
| GGAAGAAGATTTCACAGATG+AGG | + | chr7.4:4290614-4290633 | MS.gene054418:intron | 40.0% | |
| GGAATCTCTGCTTACACAAA+GGG | - | chr7.4:4291424-4291443 | None:intergenic | 40.0% | |
| GTACTTTCAAGGACATTGCA+AGG | + | chr7.4:4292806-4292825 | MS.gene054418:CDS | 40.0% | |
| GTGATTTGAGAAAGAGGGTT+AGG | + | chr7.4:4290055-4290074 | MS.gene054418:CDS | 40.0% | |
| TAATTCAATGTGGGGACAGA+CGG | - | chr7.4:4292908-4292927 | None:intergenic | 40.0% | |
| TCAAACATTGTCACTGAGGT+TGG | + | chr7.4:4292457-4292476 | MS.gene054418:CDS | 40.0% | |
| TCAAATACCTGATCACGTTC+GGG | - | chr7.4:4291503-4291522 | None:intergenic | 40.0% | |
| TCACAGTACCAATTACCTTC+AGG | - | chr7.4:4291779-4291798 | None:intergenic | 40.0% | |
| TCTACAACTGGCAGAACTAT+TGG | + | chr7.4:4292121-4292140 | MS.gene054418:CDS | 40.0% | |
| TCTCGTATATGAACAGGTGA+TGG | - | chr7.4:4291890-4291909 | None:intergenic | 40.0% | |
| TCTGTGAAATCTTCTTCCTC+TGG | - | chr7.4:4290612-4290631 | None:intergenic | 40.0% | |
| TCTTCACAGTGGTTACGATT+AGG | + | chr7.4:4293027-4293046 | MS.gene054418:CDS | 40.0% | |
| TCTTCTTCTTTGACAGTAGC+GGG | - | chr7.4:4292487-4292506 | None:intergenic | 40.0% | |
| TGAAGAAAAAGGAGACGAAG+AGG | + | chr7.4:4290386-4290405 | MS.gene054418:intron | 40.0% | |
| TGAGGAGGAAGAAGAAACAA+GGG | + | chr7.4:4290632-4290651 | MS.gene054418:intron | 40.0% | |
| TGATTCCGATGAGGATTATG+TGG | + | chr7.4:4290098-4290117 | MS.gene054418:CDS | 40.0% | |
| TGCTCATTCTTATGGAGAAG+GGG | - | chr7.4:4292306-4292325 | None:intergenic | 40.0% | |
| TGGAATCTCTGCTTACACAA+AGG | - | chr7.4:4291425-4291444 | None:intergenic | 40.0% | |
| TTGCATTATGGAGTGGTCAA+AGG | + | chr7.4:4291385-4291404 | MS.gene054418:intron | 40.0% | |
| TTTGTAGCTGCTGAACTTGA+CGG | - | chr7.4:4292069-4292088 | None:intergenic | 40.0% | |
| ! | AATAGTTCTGCCAGTTGTAG+AGG | - | chr7.4:4292122-4292141 | None:intergenic | 40.0% |
| ! | ACTATTGGTGTTTCAGCTAC+CGG | + | chr7.4:4292136-4292155 | MS.gene054418:CDS | 40.0% |
| ! | AGCTATATGGCCTGGAATTT+TGG | + | chr7.4:4292384-4292403 | MS.gene054418:CDS | 40.0% |
| ! | ATGTGTTCAGAGTGTCATCT+AGG | + | chr7.4:4291671-4291690 | MS.gene054418:CDS | 40.0% |
| ! | CAATGATGTTGATGAAGAGG+AGG | + | chr7.4:4290455-4290474 | MS.gene054418:intron | 40.0% |
| ! | CATCTTTTAGTCAAGGGTTC+GGG | + | chr7.4:4291945-4291964 | MS.gene054418:CDS | 40.0% |
| ! | CTATATGGCCTGGAATTTTG+GGG | + | chr7.4:4292386-4292405 | MS.gene054418:CDS | 40.0% |
| ! | GCTATATGGCCTGGAATTTT+GGG | + | chr7.4:4292385-4292404 | MS.gene054418:CDS | 40.0% |
| ! | TGCTATTTGTTCTGATGGCT+GGG | - | chr7.4:4290953-4290972 | None:intergenic | 40.0% |
| !! | GAACACATAACGGACTCATA+TGG | - | chr7.4:4291659-4291678 | None:intergenic | 40.0% |
| !! | GAGAAGTACCTGAAGGTAAT+TGG | + | chr7.4:4291768-4291787 | MS.gene054418:CDS | 40.0% |
| AAAGGAGCGATTGCAGTCAA+TGG | + | chr7.4:4292522-4292541 | MS.gene054418:CDS | 45.0% | |
| AATGGAAGAGGAAGAGGAAG+AGG | + | chr7.4:4290524-4290543 | MS.gene054418:intron | 45.0% | |
| AGAAGAAGTGGAAGTGGAAG+AGG | + | chr7.4:4290554-4290573 | MS.gene054418:intron | 45.0% | |
| AGAAGTAGAAGAAGAGGAGG+AGG | + | chr7.4:4290410-4290429 | MS.gene054418:intron | 45.0% | |
| AGAGGAAGAAGAAGTGGAAG+TGG | + | chr7.4:4290500-4290519 | MS.gene054418:intron | 45.0% | |
| AGAGGAAGAGGAAGAAGAAG+TGG | + | chr7.4:4290494-4290513 | MS.gene054418:intron | 45.0% | |
| AGATGAGGATTCGGAAAAGG+AGG | + | chr7.4:4290218-4290237 | MS.gene054418:CDS | 45.0% | |
| AGCCAACTGAAGAAGAACTC+AGG | + | chr7.4:4291621-4291640 | MS.gene054418:CDS | 45.0% | |
| AGCCTGTGAATGCAGCTATA+TGG | + | chr7.4:4292371-4292390 | MS.gene054418:CDS | 45.0% | |
| AGTAGAGGACTTGAAGAGTG+AGG | + | chr7.4:4291268-4291287 | MS.gene054418:CDS | 45.0% | |
| AGTGGAAATGGAAGAGGAAG+AGG | + | chr7.4:4290518-4290537 | MS.gene054418:intron | 45.0% | |
| AGTGGAAGTGGAAATGGAAG+AGG | + | chr7.4:4290512-4290531 | MS.gene054418:intron | 45.0% | |
| ATGGTTGAATCCTGAACCAC+TGG | - | chr7.4:4292340-4292359 | None:intergenic | 45.0% | |
| ATGTTTGATCTGCTGCTGCA+TGG | - | chr7.4:4292445-4292464 | None:intergenic | 45.0% | |
| CAACTTTATCAGAGAGACGG+TGG | + | chr7.4:4292038-4292057 | MS.gene054418:CDS | 45.0% | |
| CACCGTCTCTCTGATAAAGT+TGG | - | chr7.4:4292040-4292059 | None:intergenic | 45.0% | |
| CCAACACAATAAGTGTGTGC+AGG | - | chr7.4:4291740-4291759 | None:intergenic | 45.0% | |
| CCTGCACACACTTATTGTGT+TGG | + | chr7.4:4291737-4291756 | MS.gene054418:CDS | 45.0% | |
| CGAAGATTACACAGATGAGG+AGG | + | chr7.4:4290713-4290732 | MS.gene054418:intron | 45.0% | |
| CGGAAAAGGAGGTGATTCAA+CGG | + | chr7.4:4290229-4290248 | MS.gene054418:CDS | 45.0% | |
| CTCCTGAGTTCTTCTTCAGT+TGG | - | chr7.4:4291626-4291645 | None:intergenic | 45.0% | |
| CTTCTAGCAGAGGTCGAAAA+AGG | + | chr7.4:4290820-4290839 | MS.gene054418:CDS | 45.0% | |
| GAAAGAATGGAGGATCAACG+AGG | + | chr7.4:4290886-4290905 | MS.gene054418:CDS | 45.0% | |
| GAATGTGTCTGATTGTCCAG+AGG | + | chr7.4:4290137-4290156 | MS.gene054418:CDS | 45.0% | |
| GAGAAAGAGGGTTAGGTCAA+AGG | + | chr7.4:4290062-4290081 | MS.gene054418:CDS | 45.0% | |
| GAGGAGGAAGAAGAAACAAG+GGG | + | chr7.4:4290633-4290652 | MS.gene054418:intron | 45.0% | |
| GATAGAATGGCCTCTACAAC+TGG | + | chr7.4:4292109-4292128 | MS.gene054418:CDS | 45.0% | |
| GATCAGTCCTGAAAAGGAGA+AGG | + | chr7.4:4290979-4290998 | MS.gene054418:CDS | 45.0% | |
| GCTTTGCTTGCATTATGGAG+TGG | + | chr7.4:4291378-4291397 | MS.gene054418:intron | 45.0% | |
| GGAAAAGGAGGTGATTCAAC+GGG | + | chr7.4:4290230-4290249 | MS.gene054418:CDS | 45.0% | |
| GGAAGAAGTAGAAGAAGAGG+AGG | + | chr7.4:4290407-4290426 | MS.gene054418:intron | 45.0% | |
| GGACGAAGATTACACAGATG+AGG | + | chr7.4:4290710-4290729 | MS.gene054418:intron | 45.0% | |
| GGGTCTCCATTCTGCATAAA+TGG | - | chr7.4:4292286-4292305 | None:intergenic | 45.0% | |
| GTGTGGAATTTGTCTGTCTG+AGG | + | chr7.4:4291304-4291323 | MS.gene054418:intron | 45.0% | |
| GTTGATGTCCCCAAAATTCC+AGG | - | chr7.4:4292397-4292416 | None:intergenic | 45.0% | |
| GTTTCTGCAACTTCTAGCAG+AGG | + | chr7.4:4290810-4290829 | MS.gene054418:CDS | 45.0% | |
| TATGTGGTTTCGGATGATGC+CGG | + | chr7.4:4290114-4290133 | MS.gene054418:CDS | 45.0% | |
| TCTGTGTAATCTTCGTCCTC+CGG | - | chr7.4:4290708-4290727 | None:intergenic | 45.0% | |
| TGGACAATCAGACACATTCC+CGG | - | chr7.4:4290136-4290155 | None:intergenic | 45.0% | |
| TGGTTGAATCCTGAACCACT+GGG | - | chr7.4:4292339-4292358 | None:intergenic | 45.0% | |
| TGGTTGTAGACCAGTTGCTT+TGG | + | chr7.4:4291799-4291818 | MS.gene054418:CDS | 45.0% | |
| TGTTTGATCTGCTGCTGCAT+GGG | - | chr7.4:4292444-4292463 | None:intergenic | 45.0% | |
| ! | CTGCTATTTGTTCTGATGGC+TGG | - | chr7.4:4290954-4290973 | None:intergenic | 45.0% |
| ! | GGATAACCCTTCTCCTTTTC+AGG | - | chr7.4:4290989-4291008 | None:intergenic | 45.0% |
| ! | GTATATGAACAGGTGATGGC+CGG | - | chr7.4:4291886-4291905 | None:intergenic | 45.0% |
| ! | GTGCAGGCTTACTGATTGTT+TGG | - | chr7.4:4291445-4291464 | None:intergenic | 45.0% |
| ! | TATATGAACAGGTGATGGCC+GGG | - | chr7.4:4291885-4291904 | None:intergenic | 45.0% |
| ! | TGTTCAGAGTGTCATCTAGG+TGG | + | chr7.4:4291674-4291693 | MS.gene054418:CDS | 45.0% |
| ! | TGTTGATGAAGAGGAGGATG+AGG | + | chr7.4:4290461-4290480 | MS.gene054418:intron | 45.0% |
| !! | TGGTTCTGATGATTCCGATG+AGG | + | chr7.4:4290089-4290108 | MS.gene054418:CDS | 45.0% |
| !!! | CGGCTGAGGATAGTTTTGAT+GGG | + | chr7.4:4290187-4290206 | MS.gene054418:CDS | 45.0% |
| !!! | TTTTCTGGCAGAAGTACCGA+AGG | + | chr7.4:4291986-4292005 | MS.gene054418:CDS | 45.0% |
| ACGATCAACAACAGCGGAAG+AGG | + | chr7.4:4291463-4291482 | MS.gene054418:CDS | 50.0% | |
| ACTCGAGCACAATACGAGTG+AGG | + | chr7.4:4292861-4292880 | MS.gene054418:CDS | 50.0% | |
| AGACATCGGAGAAGCTCCTT+CGG | - | chr7.4:4292005-4292024 | None:intergenic | 50.0% | |
| AGAGGACTTGAAGAGTGAGG+TGG | + | chr7.4:4291271-4291290 | MS.gene054418:CDS | 50.0% | |
| AGCAGAGGTCGAAAAAGGAG+TGG | + | chr7.4:4290825-4290844 | MS.gene054418:CDS | 50.0% | |
| AGCCGGAATTGGCATCTTCA+AGG | - | chr7.4:4291010-4291029 | None:intergenic | 50.0% | |
| ATCAACAACAGCGGAAGAGG+CGG | + | chr7.4:4291466-4291485 | MS.gene054418:CDS | 50.0% | |
| ATGTGGTTTCGGATGATGCC+GGG | + | chr7.4:4290115-4290134 | MS.gene054418:CDS | 50.0% | |
| CACAGGCTCGTTCGAAAACA+TGG | - | chr7.4:4292359-4292378 | None:intergenic | 50.0% | |
| CACGAAGATGGGCAAGAAGA+AGG | + | chr7.4:4290773-4290792 | MS.gene054418:intron | 50.0% | |
| CATACCATACTCGCTGCTTG+TGG | + | chr7.4:4292838-4292857 | MS.gene054418:CDS | 50.0% | |
| CGAGGGCTAAAACTGGTGTA+AGG | + | chr7.4:4290271-4290290 | MS.gene054418:CDS | 50.0% | |
| GAAGAGTGAGGTGGGAAAAC+AGG | + | chr7.4:4291280-4291299 | MS.gene054418:CDS | 50.0% | |
| GAAGTGGAAGTGGAAGAGGT+AGG | + | chr7.4:4290558-4290577 | MS.gene054418:intron | 50.0% | |
| GAGGACTTGAAGAGTGAGGT+GGG | + | chr7.4:4291272-4291291 | MS.gene054418:CDS | 50.0% | |
| GAGGAGAGCTTCTCTTCGAA+TGG | + | chr7.4:4291136-4291155 | MS.gene054418:CDS | 50.0% | |
| GAGGTGAAGACATCAGGTTC+AGG | - | chr7.4:4291922-4291941 | None:intergenic | 50.0% | |
| GGCCATATAGCTGCATTCAC+AGG | - | chr7.4:4292376-4292395 | None:intergenic | 50.0% | |
| GTGAATGCAGCTATATGGCC+TGG | + | chr7.4:4292376-4292395 | MS.gene054418:CDS | 50.0% | |
| TCTAGACTCGCAATCTGAGC+CGG | - | chr7.4:4291027-4291046 | None:intergenic | 50.0% | |
| TGATGAAGAGGAGGATGAGG+AGG | + | chr7.4:4290464-4290483 | MS.gene054418:intron | 50.0% | |
| TGTCATCTAGGTGGAGACGA+TGG | + | chr7.4:4291683-4291702 | MS.gene054418:CDS | 50.0% | |
| ! | AAACTGGTGTAAGGCGTCAG+CGG | + | chr7.4:4290280-4290299 | MS.gene054418:CDS | 50.0% |
| ! | TTTTCCTTACCCTTCCGTGC+TGG | - | chr7.4:4291212-4291231 | None:intergenic | 50.0% |
| !! | TTGGGGAGAGAAGTACCTGA+AGG | + | chr7.4:4291761-4291780 | MS.gene054418:CDS | 50.0% |
| !!! | GCGGCTGAGGATAGTTTTGA+TGG | + | chr7.4:4290186-4290205 | MS.gene054418:CDS | 50.0% |
| AACCCTCTGTCTCTTCCTCG+AGG | - | chr7.4:4290322-4290341 | None:intergenic | 55.0% | |
| AAGCCTCGAGGAAGAGACAG+AGG | + | chr7.4:4290316-4290335 | MS.gene054418:intron | 55.0% | |
| ACAAGTGCCCGAACGTGATC+AGG | + | chr7.4:4291493-4291512 | MS.gene054418:CDS | 55.0% | |
| AGAACAGGTGAGAGAAGCCG+TGG | + | chr7.4:4291085-4291104 | MS.gene054418:CDS | 55.0% | |
| AGAGAAGCCGTGGAGTTGTG+TGG | + | chr7.4:4291095-4291114 | MS.gene054418:CDS | 55.0% | |
| AGAGGAGGATGAGGAGGAAG+AGG | + | chr7.4:4290470-4290489 | MS.gene054418:intron | 55.0% | |
| AGCAATGGAAGCCTCCAGCA+CGG | + | chr7.4:4291195-4291214 | MS.gene054418:CDS | 55.0% | |
| AGCCTCGAGGAAGAGACAGA+GGG | + | chr7.4:4290317-4290336 | MS.gene054418:intron | 55.0% | |
| AGGGTTAGGTCAAAGGGCAG+TGG | + | chr7.4:4290069-4290088 | MS.gene054418:CDS | 55.0% | |
| CAACTCAAAGCCTGCCTTCC+CGG | + | chr7.4:4291864-4291883 | MS.gene054418:CDS | 55.0% | |
| CTCGCAATCTGAGCCGGAAT+TGG | - | chr7.4:4291021-4291040 | None:intergenic | 55.0% | |
| CTTCTCCGATGTCTGGAGGT+GGG | + | chr7.4:4292011-4292030 | MS.gene054418:CDS | 55.0% | |
| GAAGGAGCTTCTCCGATGTC+TGG | + | chr7.4:4292004-4292023 | MS.gene054418:CDS | 55.0% | |
| GAGGTGGGAAAACAGGTGTG+TGG | + | chr7.4:4291287-4291306 | MS.gene054418:intron | 55.0% | |
| GAGTCCACAAGCAGCGAGTA+TGG | - | chr7.4:4292845-4292864 | None:intergenic | 55.0% | |
| GCCTGCACGATCAACAACAG+CGG | + | chr7.4:4291457-4291476 | MS.gene054418:CDS | 55.0% | |
| GGAGGAAGAGGAAGAGGAAG+AGG | + | chr7.4:4290482-4290501 | MS.gene054418:intron | 55.0% | |
| GGATGAGGAGGAAGAGGAAG+AGG | + | chr7.4:4290476-4290495 | MS.gene054418:intron | 55.0% | |
| TCAATGTGGGGACAGACGGA+TGG | - | chr7.4:4292904-4292923 | None:intergenic | 55.0% | |
| TCCGCTGTTGTTGATCGTGC+AGG | - | chr7.4:4291461-4291480 | None:intergenic | 55.0% | |
| TTCTCCGATGTCTGGAGGTG+GGG | + | chr7.4:4292012-4292031 | MS.gene054418:CDS | 55.0% | |
| TTGATCTGCTGCTGCATGGG+TGG | - | chr7.4:4292441-4292460 | None:intergenic | 55.0% | |
| TTTGGATGGATGTGCGGCTG+AGG | + | chr7.4:4290173-4290192 | MS.gene054418:CDS | 55.0% | |
| ATGGAAGCCTCCAGCACGGA+AGG | + | chr7.4:4291199-4291218 | MS.gene054418:CDS | 60.0% | |
| ATGTGGGGACAGACGGATGG+TGG | - | chr7.4:4292901-4292920 | None:intergenic | 60.0% | |
| CTGCTGCTGCATGGGTGGAT+TGG | - | chr7.4:4292436-4292455 | None:intergenic | 60.0% | |
| GAGCAATTCAAGGGGCCCAG+TGG | + | chr7.4:4292321-4292340 | MS.gene054418:CDS | 60.0% | |
| GCTTCTCCGATGTCTGGAGG+TGG | + | chr7.4:4292010-4292029 | MS.gene054418:CDS | 60.0% | |
| GGAGCTTCTCCGATGTCTGG+AGG | + | chr7.4:4292007-4292026 | MS.gene054418:CDS | 60.0% | |
| TCCTTACCCTTCCGTGCTGG+AGG | - | chr7.4:4291209-4291228 | None:intergenic | 60.0% | |
| TGGAAGCCTCCAGCACGGAA+GGG | + | chr7.4:4291200-4291219 | MS.gene054418:CDS | 60.0% | |
| TTCAAGGGGCCCAGTGGTTC+AGG | + | chr7.4:4292327-4292346 | MS.gene054418:CDS | 60.0% | |
| ! | TGAACAGGTGATGGCCGGGA+AGG | - | chr7.4:4291881-4291900 | None:intergenic | 60.0% |
| GCCTCCAGCACGGAAGGGTA+AGG | + | chr7.4:4291205-4291224 | MS.gene054418:CDS | 65.0% | |
| GGTGCCCCACCTCCAGACAT+CGG | - | chr7.4:4292019-4292038 | None:intergenic | 65.0% | |
| ! | TGGGGACAGACGGATGGTGG+AGG | - | chr7.4:4292898-4292917 | None:intergenic | 65.0% |
| ! | CAGGTGATGGCCGGGAAGGC+AGG | - | chr7.4:4291877-4291896 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4290024 | 4293056 | 4290024 | ID=MS.gene054418 |
| chr7.4 | mRNA | 4290024 | 4293056 | 4290024 | ID=MS.gene054418.t1;Parent=MS.gene054418 |
| chr7.4 | exon | 4290024 | 4290308 | 4290024 | ID=MS.gene054418.t1.exon1;Parent=MS.gene054418.t1 |
| chr7.4 | CDS | 4290024 | 4290308 | 4290024 | ID=cds.MS.gene054418.t1;Parent=MS.gene054418.t1 |
| chr7.4 | exon | 4290804 | 4291301 | 4290804 | ID=MS.gene054418.t1.exon2;Parent=MS.gene054418.t1 |
| chr7.4 | CDS | 4290804 | 4291301 | 4290804 | ID=cds.MS.gene054418.t1;Parent=MS.gene054418.t1 |
| chr7.4 | exon | 4291407 | 4291514 | 4291407 | ID=MS.gene054418.t1.exon3;Parent=MS.gene054418.t1 |
| chr7.4 | CDS | 4291407 | 4291514 | 4291407 | ID=cds.MS.gene054418.t1;Parent=MS.gene054418.t1 |
| chr7.4 | exon | 4291614 | 4292586 | 4291614 | ID=MS.gene054418.t1.exon4;Parent=MS.gene054418.t1 |
| chr7.4 | CDS | 4291614 | 4292586 | 4291614 | ID=cds.MS.gene054418.t1;Parent=MS.gene054418.t1 |
| chr7.4 | exon | 4292800 | 4293056 | 4292800 | ID=MS.gene054418.t1.exon5;Parent=MS.gene054418.t1 |
| chr7.4 | CDS | 4292800 | 4293056 | 4292800 | ID=cds.MS.gene054418.t1;Parent=MS.gene054418.t1 |
| Gene Sequence |
| Protein sequence |
