Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054512.t1 | RHN51461.1 | 80.4 | 153 | 30 | 0 | 41 | 193 | 100 | 252 | 8.30E-68 | 267.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054512.t1 | Q8VZ17 | 55.2 | 96 | 42 | 1 | 285 | 380 | 696 | 790 | 7.4e-25 | 116.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054512.t1 | A0A396HFZ0 | 80.4 | 153 | 30 | 0 | 41 | 193 | 100 | 252 | 6.0e-68 | 267.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054512.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054512.t1 | MTR_7g450730 | 54.268 | 164 | 59 | 4 | 218 | 380 | 357 | 505 | 2.24e-43 | 157 |
| MS.gene054512.t1 | MTR_7g445710 | 69.912 | 113 | 27 | 3 | 269 | 380 | 437 | 543 | 2.70e-43 | 158 |
| MS.gene054512.t1 | MTR_5g013420 | 61.111 | 90 | 34 | 1 | 291 | 380 | 1001 | 1089 | 3.69e-32 | 129 |
| MS.gene054512.t1 | MTR_5g013420 | 60.000 | 90 | 35 | 1 | 291 | 380 | 1001 | 1089 | 7.55e-31 | 124 |
| MS.gene054512.t1 | MTR_4g010830 | 57.778 | 90 | 37 | 1 | 291 | 380 | 892 | 980 | 1.28e-29 | 121 |
| MS.gene054512.t1 | MTR_4g010550 | 57.778 | 90 | 37 | 1 | 291 | 380 | 376 | 464 | 2.47e-29 | 118 |
| MS.gene054512.t1 | MTR_7g445530 | 69.880 | 83 | 18 | 3 | 269 | 350 | 437 | 513 | 8.87e-27 | 111 |
| MS.gene054512.t1 | MTR_7g445600 | 67.105 | 76 | 23 | 2 | 276 | 350 | 282 | 356 | 2.48e-23 | 100 |
| MS.gene054512.t1 | MTR_7g084090 | 46.364 | 110 | 56 | 2 | 271 | 380 | 651 | 757 | 1.33e-22 | 100 |
| MS.gene054512.t1 | MTR_6g061200 | 50.000 | 90 | 44 | 1 | 291 | 380 | 577 | 665 | 1.68e-22 | 99.8 |
| MS.gene054512.t1 | MTR_7g052480 | 46.667 | 90 | 47 | 1 | 291 | 380 | 468 | 556 | 1.47e-21 | 96.7 |
| MS.gene054512.t1 | MTR_6g061270 | 50.000 | 90 | 44 | 1 | 291 | 380 | 606 | 694 | 2.01e-21 | 96.7 |
| MS.gene054512.t1 | MTR_1g048950 | 42.718 | 103 | 53 | 2 | 278 | 380 | 437 | 533 | 3.05e-17 | 83.6 |
| MS.gene054512.t1 | MTR_8g078490 | 45.652 | 92 | 42 | 3 | 289 | 380 | 1170 | 1253 | 7.51e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054512.t1 | AT2G35160 | 56.250 | 96 | 41 | 1 | 285 | 380 | 700 | 794 | 1.70e-29 | 120 |
| MS.gene054512.t1 | AT2G35160 | 56.250 | 96 | 41 | 1 | 285 | 380 | 700 | 794 | 1.70e-29 | 120 |
| MS.gene054512.t1 | AT2G35160 | 56.250 | 96 | 41 | 1 | 285 | 380 | 700 | 794 | 1.70e-29 | 120 |
| MS.gene054512.t1 | AT2G35160 | 56.250 | 96 | 41 | 1 | 285 | 380 | 700 | 794 | 1.70e-29 | 120 |
| MS.gene054512.t1 | AT2G35160 | 56.250 | 96 | 41 | 1 | 285 | 380 | 664 | 758 | 1.79e-29 | 120 |
| MS.gene054512.t1 | AT2G22740 | 54.639 | 97 | 43 | 1 | 284 | 380 | 695 | 790 | 5.95e-29 | 119 |
| MS.gene054512.t1 | AT2G22740 | 54.639 | 97 | 43 | 1 | 284 | 380 | 695 | 790 | 5.95e-29 | 119 |
| MS.gene054512.t1 | AT5G13960 | 48.889 | 90 | 45 | 1 | 291 | 380 | 536 | 624 | 1.05e-20 | 94.4 |
| MS.gene054512.t1 | AT5G13960 | 48.889 | 90 | 45 | 1 | 291 | 380 | 402 | 490 | 1.25e-20 | 93.6 |
Find 84 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTCGCCATGTTGTCTTT+TGG | 0.236683 | 7.4:+55014469 | MS.gene054512:CDS |
| GCTCGAGTTTAGTATACTTA+TGG | 0.246095 | 7.4:-55014359 | None:intergenic |
| TCTAAATATTTATCAGAAAA+TGG | 0.251055 | 7.4:-55016109 | None:intergenic |
| AACTTAAGGGAGTTATAATT+TGG | 0.252219 | 7.4:-55014303 | None:intergenic |
| CCACCACTGAGCTTCCTAAA+AGG | 0.257244 | 7.4:+55014700 | MS.gene054512:CDS |
| ATTCGAATGCATTGGGATAT+TGG | 0.275968 | 7.4:-55014447 | None:intergenic |
| GCTTCACCCCATGCGTGTTC+TGG | 0.288777 | 7.4:-55014192 | None:intergenic |
| ACCATTGATGCTGCTAAGTA+TGG | 0.290913 | 7.4:+55016951 | MS.gene054512:CDS |
| TTCGACCTTACTATCGTTGA+TGG | 0.298068 | 7.4:-55016865 | None:intergenic |
| CTCGAGTTTAGTATACTTAT+GGG | 0.322490 | 7.4:-55014358 | None:intergenic |
| AAGGGAGACGATTGATTATA+TGG | 0.337114 | 7.4:-55014230 | None:intergenic |
| TATAACTCCCTTAAGTTGTC+TGG | 0.351804 | 7.4:+55014309 | MS.gene054512:CDS |
| AAGCACAACCAGACAACTTA+AGG | 0.354122 | 7.4:-55014317 | None:intergenic |
| TATTTATCAGAAAATGGTAT+TGG | 0.375824 | 7.4:-55016103 | None:intergenic |
| CCATCGGCAGTGTGGATAGA+AGG | 0.386203 | 7.4:-55013448 | None:intergenic |
| CCATGGACTGGACAACTCAT+AGG | 0.402196 | 7.4:+55013636 | MS.gene054512:CDS |
| AGAGAGGAGTGGAAGTAGAC+GGG | 0.422706 | 7.4:-55014533 | None:intergenic |
| AACACAAAGGTTATCGATGT+TGG | 0.442481 | 7.4:+55014421 | MS.gene054512:CDS |
| AGGAAGAAAGAGTGTTATTG+TGG | 0.444866 | 7.4:+55017167 | MS.gene054512:CDS |
| AAAGTTGGAACAACATCATC+AGG | 0.449881 | 7.4:-55014663 | None:intergenic |
| CTTCATACCTCTATTCGTGC+AGG | 0.457367 | 7.4:+55016145 | MS.gene054512:CDS |
| CGTCTCCCTTCCTCTGTCCT+TGG | 0.469527 | 7.4:+55014243 | MS.gene054512:CDS |
| AATCAAGTGACTGATTCAAA+TGG | 0.475671 | 7.4:+55017137 | MS.gene054512:CDS |
| AAGAGAGGAGTGGAAGTAGA+CGG | 0.478939 | 7.4:-55014534 | None:intergenic |
| GGCGAGATATTCGAATGCAT+TGG | 0.479916 | 7.4:-55014455 | None:intergenic |
| GATTGACTTAAACTTTGATA+AGG | 0.480561 | 7.4:-55014511 | None:intergenic |
| CACCACTGAGCTTCCTAAAA+GGG | 0.484204 | 7.4:+55014701 | MS.gene054512:CDS |
| ACCATACTTAGCAGCATCAA+TGG | 0.484758 | 7.4:-55016952 | None:intergenic |
| GCGAGATATTCGAATGCATT+GGG | 0.486315 | 7.4:-55014454 | None:intergenic |
| AGAAACCATCAACGATAGTA+AGG | 0.486404 | 7.4:+55016860 | MS.gene054512:CDS |
| AGAGCAACCTGCACGAATAG+AGG | 0.486745 | 7.4:-55016152 | None:intergenic |
| ACACAAAGGTTATCGATGTT+GGG | 0.496437 | 7.4:+55014422 | MS.gene054512:CDS |
| CATGTGTGTCACTAGGAAAA+AGG | 0.504230 | 7.4:-55014575 | None:intergenic |
| TTCTTGTCCAGAACACGCAT+GGG | 0.508979 | 7.4:+55014185 | MS.gene054512:CDS |
| CTGATTCAAATGGAAAAGTA+AGG | 0.510505 | 7.4:+55017147 | MS.gene054512:CDS |
| CTTCTTGTCCAGAACACGCA+TGG | 0.516268 | 7.4:+55014184 | MS.gene054512:CDS |
| TGTCCGTAGCTGCATATAGC+AGG | 0.529365 | 7.4:-55017070 | None:intergenic |
| GATGGTACATGATCAAAAGT+TGG | 0.531029 | 7.4:-55014678 | None:intergenic |
| AGCACAACCAGACAACTTAA+GGG | 0.531186 | 7.4:-55014316 | None:intergenic |
| AAAAGAACAAAGAGAATGAG+AGG | 0.531414 | 7.4:+55016835 | MS.gene054512:CDS |
| CCTATGAGTTGTCCAGTCCA+TGG | 0.534893 | 7.4:-55013636 | None:intergenic |
| TTTCCTAGTGACACACATGC+AGG | 0.536283 | 7.4:+55014579 | MS.gene054512:CDS |
| TGGAACAACATCATCAGGAG+TGG | 0.537227 | 7.4:-55014658 | None:intergenic |
| TGTGGTAGTGGCAGTGATAG+TGG | 0.538029 | 7.4:+55016921 | MS.gene054512:CDS |
| ACTGGACAACTCATAGGGAC+TGG | 0.540192 | 7.4:+55013642 | MS.gene054512:CDS |
| ACATTACCAAGGACAGAGGA+AGG | 0.540464 | 7.4:-55014249 | None:intergenic |
| TAGTATACTTATGGGGCTGA+AGG | 0.545130 | 7.4:-55014350 | None:intergenic |
| ATTGATGATCGATGTGGTAG+TGG | 0.546467 | 7.4:+55016909 | MS.gene054512:CDS |
| CATCCTGCTATATGCAGCTA+CGG | 0.552116 | 7.4:+55017067 | MS.gene054512:CDS |
| AGTGGGTTGAACATCGGAAG+AGG | 0.557749 | 7.4:-55014640 | None:intergenic |
| CCTTCTATCCACACTGCCGA+TGG | 0.559110 | 7.4:+55013448 | MS.gene054512:CDS |
| TTAGGAAGCTCAGTGGTGGA+TGG | 0.561893 | 7.4:-55014696 | None:intergenic |
| GGTTGAACATCGGAAGAGGT+TGG | 0.562429 | 7.4:-55014636 | None:intergenic |
| CGAAGCTTCAAGTTGTAAAG+AGG | 0.564368 | 7.4:+55016884 | MS.gene054512:CDS |
| CATGGACTGGACAACTCATA+GGG | 0.567437 | 7.4:+55013637 | MS.gene054512:CDS |
| CTAAGTATGGTAACATGGCA+AGG | 0.577841 | 7.4:+55016964 | MS.gene054512:CDS |
| CTGGACAACTCATAGGGACT+GGG | 0.579307 | 7.4:+55013643 | MS.gene054512:CDS |
| GATGTCGTGTGCAGGATCCA+TGG | 0.581795 | 7.4:+55013619 | MS.gene054512:intron |
| TACGTGCATAAGAGATCCAT+CGG | 0.585210 | 7.4:-55013464 | None:intergenic |
| GAACCTGCATGTGTGTCACT+AGG | 0.585642 | 7.4:-55014582 | None:intergenic |
| CAGTCTACGAATGCATTCAA+AGG | 0.596308 | 7.4:-55017192 | None:intergenic |
| ATCAGGAGTGGGTTGAACAT+CGG | 0.605424 | 7.4:-55014646 | None:intergenic |
| AGGGTTAGTAAAGAGAGGAG+TGG | 0.605443 | 7.4:-55014544 | None:intergenic |
| CGTGTGCAGGATCCATGGAC+TGG | 0.616943 | 7.4:+55013624 | MS.gene054512:intron |
| ACATCAGGGTTAGTAAAGAG+AGG | 0.623863 | 7.4:-55014549 | None:intergenic |
| GGAACAACATCATCAGGAGT+GGG | 0.630931 | 7.4:-55014657 | None:intergenic |
| AAACAACACAGACGAGCACG+AGG | 0.632876 | 7.4:-55014381 | None:intergenic |
| TCGAGTTTAGTATACTTATG+GGG | 0.639262 | 7.4:-55014357 | None:intergenic |
| GTAGTGGCAGTGATAGTGGT+AGG | 0.642669 | 7.4:+55016925 | MS.gene054512:CDS |
| AAGCTGAGATAAGCATGGCA+CGG | 0.652982 | 7.4:-55014164 | None:intergenic |
| GCTGCATATAGCAGGATGTG+TGG | 0.654272 | 7.4:-55017062 | None:intergenic |
| TATATGGACAGCGGTAAGAG+CGG | 0.654610 | 7.4:-55014214 | None:intergenic |
| ACAAGAAGCTGAGATAAGCA+TGG | 0.658407 | 7.4:-55014169 | None:intergenic |
| TGCTGCTAAGTATGGTAACA+TGG | 0.662096 | 7.4:+55016959 | MS.gene054512:CDS |
| CATTACCAAGGACAGAGGAA+GGG | 0.665551 | 7.4:-55014248 | None:intergenic |
| TAAGAGATCCATCGGCAGTG+TGG | 0.675049 | 7.4:-55013456 | None:intergenic |
| TATGATCCCAAAAGACAACA+TGG | 0.678790 | 7.4:-55014476 | None:intergenic |
| GAGGTCATTGATGATCGATG+TGG | 0.693873 | 7.4:+55016903 | MS.gene054512:CDS |
| AGAGACATTACCAAGGACAG+AGG | 0.698181 | 7.4:-55014253 | None:intergenic |
| TCTTGTCCAGAACACGCATG+GGG | 0.700346 | 7.4:+55014186 | MS.gene054512:CDS |
| ACGATTGATTATATGGACAG+CGG | 0.721102 | 7.4:-55014223 | None:intergenic |
| GGTTATGGGACTGAACACAA+AGG | 0.726073 | 7.4:+55014408 | MS.gene054512:CDS |
| ACGTGTACGATGATGATCTG+AGG | 0.743706 | 7.4:+55017036 | MS.gene054512:CDS |
| CAAAAGGAGAGACATTACCA+AGG | 0.757116 | 7.4:-55014260 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAGCTTAAATTAGATA+GGG | - | chr7.4:55013508-55013527 | None:intergenic | 15.0% |
| !! | TATTTAAGCTTAAATTAGAT+AGG | - | chr7.4:55013509-55013528 | None:intergenic | 15.0% |
| !! | TCTAAATATTTATCAGAAAA+TGG | - | chr7.4:55016112-55016131 | None:intergenic | 15.0% |
| !! | TTGTTGAATAAAATTGAAAA+TGG | + | chr7.4:55015786-55015805 | MS.gene054512:intron | 15.0% |
| !!! | AATAAAATTGAAAATGGATT+TGG | + | chr7.4:55015792-55015811 | MS.gene054512:intron | 15.0% |
| !!! | ATAAGGTTAAAATTTAGTTT+AGG | - | chr7.4:55013546-55013565 | None:intergenic | 15.0% |
| !!! | TAAGGTTAAAATTTAGTTTA+GGG | - | chr7.4:55013545-55013564 | None:intergenic | 15.0% |
| !! | AATTACACTTCAATTAGATA+GGG | - | chr7.4:55015512-55015531 | None:intergenic | 20.0% |
| !! | AGAAAATAATTTCATAACCA+AGG | - | chr7.4:55013590-55013609 | None:intergenic | 20.0% |
| !! | ATTATAAGAGTAGTTTATCA+GGG | + | chr7.4:55015592-55015611 | MS.gene054512:intron | 20.0% |
| !! | TAACTCTAGTTATATAAACA+CGG | - | chr7.4:55016437-55016456 | None:intergenic | 20.0% |
| !! | TATTTATCAGAAAATGGTAT+TGG | - | chr7.4:55016106-55016125 | None:intergenic | 20.0% |
| !! | TTTACTTGGAAAACAAAAAA+TGG | + | chr7.4:55015320-55015339 | MS.gene054512:intron | 20.0% |
| !!! | AAAATGCTTTATTTAGACAT+TGG | - | chr7.4:55016083-55016102 | None:intergenic | 20.0% |
| !!! | AACATTTAGAGCAAAAAAAT+TGG | - | chr7.4:55017012-55017031 | None:intergenic | 20.0% |
| !!! | ACATTTAGAGCAAAAAAATT+GGG | - | chr7.4:55017011-55017030 | None:intergenic | 20.0% |
| !!! | ATTAATGTCATTTTTGGATA+GGG | - | chr7.4:55013428-55013447 | None:intergenic | 20.0% |
| ! | AAAAATTGGGAGAAAAACTA+TGG | - | chr7.4:55016998-55017017 | None:intergenic | 25.0% |
| ! | AACTTAAGGGAGTTATAATT+TGG | - | chr7.4:55014306-55014325 | None:intergenic | 25.0% |
| ! | AATAACAATGGTAATCATGA+AGG | - | chr7.4:55014746-55014765 | None:intergenic | 25.0% |
| ! | AATCTTAGTCATTTAGTGAT+TGG | - | chr7.4:55016587-55016606 | None:intergenic | 25.0% |
| ! | AGAAACTTTGTGAAACAAAT+TGG | + | chr7.4:55015687-55015706 | MS.gene054512:intron | 25.0% |
| ! | CAATTACACTTCAATTAGAT+AGG | - | chr7.4:55015513-55015532 | None:intergenic | 25.0% |
| ! | CCAAGAAACTGAAATTAAAA+TGG | + | chr7.4:55016784-55016803 | MS.gene054512:intron | 25.0% |
| ! | CTATCTAATTGAAGTGTAAT+TGG | + | chr7.4:55015511-55015530 | MS.gene054512:intron | 25.0% |
| ! | GAAAGCCATTATAAAAATTG+CGG | + | chr7.4:55016183-55016202 | MS.gene054512:intron | 25.0% |
| ! | GATTATAAGAGTAGTTTATC+AGG | + | chr7.4:55015591-55015610 | MS.gene054512:intron | 25.0% |
| ! | GTTAAAAATGCATTTCTGAA+CGG | + | chr7.4:55015116-55015135 | MS.gene054512:intron | 25.0% |
| ! | TATATAACTAGAGTTAGTCA+AGG | + | chr7.4:55016441-55016460 | MS.gene054512:intron | 25.0% |
| ! | TATATGATATGTAGGAACAT+GGG | + | chr7.4:55015754-55015773 | MS.gene054512:intron | 25.0% |
| ! | TTATATGATATGTAGGAACA+TGG | + | chr7.4:55015753-55015772 | MS.gene054512:intron | 25.0% |
| !! | AGTACTTTTATTGAAAGACA+AGG | - | chr7.4:55013887-55013906 | None:intergenic | 25.0% |
| !! | ATGTGTTTTTCTTATATCTC+TGG | + | chr7.4:55015868-55015887 | MS.gene054512:intron | 25.0% |
| !! | ATTGAAAATGGATTTGGATT+TGG | + | chr7.4:55015798-55015817 | MS.gene054512:intron | 25.0% |
| !! | GATTGACTTAAACTTTGATA+AGG | - | chr7.4:55014514-55014533 | None:intergenic | 25.0% |
| !!! | AATTTTAACCTTATCTCTGT+TGG | + | chr7.4:55013552-55013571 | MS.gene054512:intron | 25.0% |
| !!! | AGAAGGATTAATGTCATTTT+TGG | - | chr7.4:55013434-55013453 | None:intergenic | 25.0% |
| !!! | CCATTTTAATTTCAGTTTCT+TGG | - | chr7.4:55016787-55016806 | None:intergenic | 25.0% |
| !!! | GATTAATGTCATTTTTGGAT+AGG | - | chr7.4:55013429-55013448 | None:intergenic | 25.0% |
| AAAAGAACAAAGAGAATGAG+AGG | + | chr7.4:55016835-55016854 | MS.gene054512:CDS | 30.0% | |
| AAAAGATATTTAGCATGAGC+TGG | - | chr7.4:55016259-55016278 | None:intergenic | 30.0% | |
| AAAATCAAGACACATTGAGA+TGG | + | chr7.4:55014933-55014952 | MS.gene054512:intron | 30.0% | |
| AAAGATATTTAGCATGAGCT+GGG | - | chr7.4:55016258-55016277 | None:intergenic | 30.0% | |
| ATATTCCGAACTGAATACTT+GGG | + | chr7.4:55015990-55016009 | MS.gene054512:intron | 30.0% | |
| ATCAAATGGTGAAACTGAAA+TGG | - | chr7.4:55013911-55013930 | None:intergenic | 30.0% | |
| ATCTAGTGCATTCTGATATT+TGG | + | chr7.4:55013929-55013948 | MS.gene054512:intron | 30.0% | |
| ATGATTATTCTCGCTTTACA+TGG | + | chr7.4:55014007-55014026 | MS.gene054512:intron | 30.0% | |
| CAACACAAAATCAGATTATG+CGG | + | chr7.4:55016311-55016330 | MS.gene054512:intron | 30.0% | |
| CAACTTACCAATTGAACTAT+GGG | - | chr7.4:55013778-55013797 | None:intergenic | 30.0% | |
| CACATTAATCCATTCAACTT+TGG | + | chr7.4:55013739-55013758 | MS.gene054512:intron | 30.0% | |
| CTCGAGTTTAGTATACTTAT+GGG | - | chr7.4:55014361-55014380 | None:intergenic | 30.0% | |
| CTGATTCAAATGGAAAAGTA+AGG | + | chr7.4:55017147-55017166 | MS.gene054512:CDS | 30.0% | |
| GAAGCATAGTAGAATAACAA+TGG | - | chr7.4:55014758-55014777 | None:intergenic | 30.0% | |
| GGAAACAACAATCAAAAACT+TGG | + | chr7.4:55016746-55016765 | MS.gene054512:intron | 30.0% | |
| GTACAATCAAATGACTCATT+AGG | - | chr7.4:55013838-55013857 | None:intergenic | 30.0% | |
| TAGGTGTTAGATGATATGTA+TGG | + | chr7.4:55015726-55015745 | MS.gene054512:intron | 30.0% | |
| TAGTCATTTAGTGATTGGTA+TGG | - | chr7.4:55016582-55016601 | None:intergenic | 30.0% | |
| TATATTCCGAACTGAATACT+TGG | + | chr7.4:55015989-55016008 | MS.gene054512:intron | 30.0% | |
| TCGAGTTTAGTATACTTATG+GGG | - | chr7.4:55014360-55014379 | None:intergenic | 30.0% | |
| TCTAGTGCATTCTGATATTT+GGG | + | chr7.4:55013930-55013949 | MS.gene054512:intron | 30.0% | |
| TCTTGATTGCAAAGTGTATA+TGG | - | chr7.4:55016553-55016572 | None:intergenic | 30.0% | |
| TGGAGGATTATATGATATGT+AGG | + | chr7.4:55015746-55015765 | MS.gene054512:intron | 30.0% | |
| TGGTTGTGATTGATTAACAT+AGG | + | chr7.4:55015707-55015726 | MS.gene054512:intron | 30.0% | |
| TTCTTGTTGGAGAATTGAAA+TGG | - | chr7.4:55016646-55016665 | None:intergenic | 30.0% | |
| ! | AAATGTTATTGATTGACACC+TGG | + | chr7.4:55015962-55015981 | MS.gene054512:intron | 30.0% |
| ! | AATCAAGTGACTGATTCAAA+TGG | + | chr7.4:55017137-55017156 | MS.gene054512:CDS | 30.0% |
| ! | AATTGAAATGGTTTGTGTTG+TGG | - | chr7.4:55016634-55016653 | None:intergenic | 30.0% |
| ! | ACTTCTAAGAGTAGTTTATC+AGG | + | chr7.4:55015534-55015553 | MS.gene054512:intron | 30.0% |
| ! | ATGATTCTGCTCTTTTTACT+TGG | + | chr7.4:55015306-55015325 | MS.gene054512:intron | 30.0% |
| ! | ATTGAAATGGTTTGTGTTGT+GGG | - | chr7.4:55016633-55016652 | None:intergenic | 30.0% |
| ! | CTTCTAAGAGTAGTTTATCA+GGG | + | chr7.4:55015535-55015554 | MS.gene054512:intron | 30.0% |
| ! | CTTTTATTGAAAGACAAGGT+AGG | - | chr7.4:55013883-55013902 | None:intergenic | 30.0% |
| ! | GAAATTATTTTCTCTTCCTC+TGG | + | chr7.4:55013597-55013616 | MS.gene054512:intron | 30.0% |
| ! | TAAGTCAGCTCATTCATTTT+CGG | - | chr7.4:55017098-55017117 | None:intergenic | 30.0% |
| ! | TATGATGATTGGTTGGATTA+AGG | + | chr7.4:55016216-55016235 | MS.gene054512:intron | 30.0% |
| !! | AAGTTGAATGGATTAATGTG+TGG | - | chr7.4:55013739-55013758 | None:intergenic | 30.0% |
| !! | GTTGATGACATGATTATTAC+TGG | + | chr7.4:55015365-55015384 | MS.gene054512:intron | 30.0% |
| !!! | GTTTTTGATTGTTGTTTCCT+TGG | - | chr7.4:55016745-55016764 | None:intergenic | 30.0% |
| !!! | TGTGTTGTTTTCTTGGTTAT+GGG | + | chr7.4:55014394-55014413 | MS.gene054512:CDS | 30.0% |
| AAAGTTGGAACAACATCATC+AGG | - | chr7.4:55014666-55014685 | None:intergenic | 35.0% | |
| AAATAACCTTGAGACACTAG+AGG | - | chr7.4:55013804-55013823 | None:intergenic | 35.0% | |
| AACACAAAGGTTATCGATGT+TGG | + | chr7.4:55014421-55014440 | MS.gene054512:CDS | 35.0% | |
| AAGGGAGACGATTGATTATA+TGG | - | chr7.4:55014233-55014252 | None:intergenic | 35.0% | |
| AATTTAGCAAACCAAGTCTG+AGG | - | chr7.4:55015245-55015264 | None:intergenic | 35.0% | |
| ACACAAAGGTTATCGATGTT+GGG | + | chr7.4:55014422-55014441 | MS.gene054512:CDS | 35.0% | |
| ACGATTGATTATATGGACAG+CGG | - | chr7.4:55014226-55014245 | None:intergenic | 35.0% | |
| ACTTGTCAGGAAAACAAAGT+TGG | + | chr7.4:55015182-55015201 | MS.gene054512:intron | 35.0% | |
| AGAAACCATCAACGATAGTA+AGG | + | chr7.4:55016860-55016879 | MS.gene054512:CDS | 35.0% | |
| ATAAAAATTGCGGTGCTCTT+CGG | + | chr7.4:55016193-55016212 | MS.gene054512:intron | 35.0% | |
| ATCTATAGAGGCTTCCTTAT+AGG | - | chr7.4:55014799-55014818 | None:intergenic | 35.0% | |
| ATGTTCCCAAGTATTCAGTT+CGG | - | chr7.4:55015998-55016017 | None:intergenic | 35.0% | |
| ATTAGAGAATACCCACACAT+GGG | + | chr7.4:55014857-55014876 | MS.gene054512:intron | 35.0% | |
| ATTCGAATGCATTGGGATAT+TGG | - | chr7.4:55014450-55014469 | None:intergenic | 35.0% | |
| ATTGCAAAGTGTATATGGCT+GGG | - | chr7.4:55016548-55016567 | None:intergenic | 35.0% | |
| CACTTCAATTAGATAGGGTT+AGG | - | chr7.4:55015507-55015526 | None:intergenic | 35.0% | |
| CCATACACATCTCAACAAAA+TGG | + | chr7.4:55014102-55014121 | MS.gene054512:intron | 35.0% | |
| CTAGTGCATTCTGATATTTG+GGG | + | chr7.4:55013931-55013950 | MS.gene054512:intron | 35.0% | |
| CTAGTGTCTCAAGGTTATTT+AGG | + | chr7.4:55013804-55013823 | MS.gene054512:intron | 35.0% | |
| GATGGTACATGATCAAAAGT+TGG | - | chr7.4:55014681-55014700 | None:intergenic | 35.0% | |
| GCAACTTACCAATTGAACTA+TGG | - | chr7.4:55013779-55013798 | None:intergenic | 35.0% | |
| GCTCGAGTTTAGTATACTTA+TGG | - | chr7.4:55014362-55014381 | None:intergenic | 35.0% | |
| GTAAAAAGAGCAGAATCATG+AGG | - | chr7.4:55015305-55015324 | None:intergenic | 35.0% | |
| GTGAGATAAAAACGCTCAAA+AGG | - | chr7.4:55014279-55014298 | None:intergenic | 35.0% | |
| GTGTTAGATGATATGTATGG+AGG | + | chr7.4:55015729-55015748 | MS.gene054512:intron | 35.0% | |
| TAATCATGAAGGTAAGAAGG+TGG | - | chr7.4:55014735-55014754 | None:intergenic | 35.0% | |
| TACAAGTCTGAATTCCAGTT+GGG | - | chr7.4:55016282-55016301 | None:intergenic | 35.0% | |
| TATGATCCCAAAAGACAACA+TGG | - | chr7.4:55014479-55014498 | None:intergenic | 35.0% | |
| TATTAGATGGAGGATCAACA+AGG | - | chr7.4:55014884-55014903 | None:intergenic | 35.0% | |
| TCAGAATGCACTAGATCAAA+TGG | - | chr7.4:55013925-55013944 | None:intergenic | 35.0% | |
| TCTTTCAGTAAGGTTCTTGT+TGG | - | chr7.4:55016659-55016678 | None:intergenic | 35.0% | |
| TGGTAATCATGAAGGTAAGA+AGG | - | chr7.4:55014738-55014757 | None:intergenic | 35.0% | |
| TGTTTCGTACTCAAAGGAAT+TGG | - | chr7.4:55015484-55015503 | None:intergenic | 35.0% | |
| TTCAAGAAACACTGAAACCA+AGG | + | chr7.4:55016725-55016744 | MS.gene054512:intron | 35.0% | |
| ! | AGTGTTTTCCACCTTAGTTT+GGG | + | chr7.4:55015829-55015848 | MS.gene054512:intron | 35.0% |
| ! | ATTACTGGTAATGACTCTGT+TGG | + | chr7.4:55015380-55015399 | MS.gene054512:intron | 35.0% |
| ! | CCATTTTGTTGAGATGTGTA+TGG | - | chr7.4:55014105-55014124 | None:intergenic | 35.0% |
| ! | GCTAAATATCTTTTCCCAAC+TGG | + | chr7.4:55016265-55016284 | MS.gene054512:intron | 35.0% |
| ! | TATAACTCCCTTAAGTTGTC+TGG | + | chr7.4:55014309-55014328 | MS.gene054512:CDS | 35.0% |
| ! | TCTGATTTTGTGTTGTCAGA+TGG | - | chr7.4:55016306-55016325 | None:intergenic | 35.0% |
| ! | TGAATAAACTTTTGCTCCTG+TGG | + | chr7.4:55015022-55015041 | MS.gene054512:intron | 35.0% |
| ! | TTGTCATTTCTTAGTGAGCA+GGG | + | chr7.4:55014057-55014076 | MS.gene054512:intron | 35.0% |
| ! | TTTTCCTGACAAGTATAACC+TGG | - | chr7.4:55015176-55015195 | None:intergenic | 35.0% |
| !! | AGCTGGGATTTTGGAAAATA+AGG | - | chr7.4:55016242-55016261 | None:intergenic | 35.0% |
| !! | AGGAAGAAAGAGTGTTATTG+TGG | + | chr7.4:55017167-55017186 | MS.gene054512:CDS | 35.0% |
| !! | GAGCACCGCAATTTTTATAA+TGG | - | chr7.4:55016191-55016210 | None:intergenic | 35.0% |
| !!! | CTGTGTTGTTTTCTTGGTTA+TGG | + | chr7.4:55014393-55014412 | MS.gene054512:CDS | 35.0% |
| AAAGGCTTCACTCAAGAGTA+TGG | + | chr7.4:55014990-55015009 | MS.gene054512:intron | 40.0% | |
| AAGCACAACCAGACAACTTA+AGG | - | chr7.4:55014320-55014339 | None:intergenic | 40.0% | |
| AAGCCTCTATAGATCCTCAT+TGG | + | chr7.4:55014805-55014824 | MS.gene054512:intron | 40.0% | |
| ACAACAACGCTCTTTCAGTA+AGG | - | chr7.4:55016669-55016688 | None:intergenic | 40.0% | |
| ACAAGAAGCTGAGATAAGCA+TGG | - | chr7.4:55014172-55014191 | None:intergenic | 40.0% | |
| ACCATACTTAGCAGCATCAA+TGG | - | chr7.4:55016955-55016974 | None:intergenic | 40.0% | |
| ACCATTGATGCTGCTAAGTA+TGG | + | chr7.4:55016951-55016970 | MS.gene054512:CDS | 40.0% | |
| AGAATTGGCCAACAGAGATA+AGG | - | chr7.4:55013563-55013582 | None:intergenic | 40.0% | |
| AGCACAACCAGACAACTTAA+GGG | - | chr7.4:55014319-55014338 | None:intergenic | 40.0% | |
| ATACTCTTGAGTGAAGCCTT+TGG | - | chr7.4:55014991-55015010 | None:intergenic | 40.0% | |
| CAAAAGGAGAGACATTACCA+AGG | - | chr7.4:55014263-55014282 | None:intergenic | 40.0% | |
| CAAACTAAGGTGGAAAACAC+TGG | - | chr7.4:55015830-55015849 | None:intergenic | 40.0% | |
| CACAAAATCAGATTATGCGG+CGG | + | chr7.4:55016314-55016333 | MS.gene054512:intron | 40.0% | |
| CACAGTACTGTAAGTCAGTT+GGG | + | chr7.4:55015266-55015285 | MS.gene054512:intron | 40.0% | |
| CAGTCTACGAATGCATTCAA+AGG | - | chr7.4:55017195-55017214 | None:intergenic | 40.0% | |
| CATAACCAAGGTCACAGAAT+TGG | - | chr7.4:55013578-55013597 | None:intergenic | 40.0% | |
| CATCAAACACACACTGATGA+TGG | - | chr7.4:55016055-55016074 | None:intergenic | 40.0% | |
| CATTAGAGAATACCCACACA+TGG | + | chr7.4:55014856-55014875 | MS.gene054512:intron | 40.0% | |
| CTAAGTATGGTAACATGGCA+AGG | + | chr7.4:55016964-55016983 | MS.gene054512:CDS | 40.0% | |
| CTACAAGTCTGAATTCCAGT+TGG | - | chr7.4:55016283-55016302 | None:intergenic | 40.0% | |
| CTACCAATGAGGATCTATAG+AGG | - | chr7.4:55014811-55014830 | None:intergenic | 40.0% | |
| GATAGGGAGATAGAACTGTA+TGG | - | chr7.4:55013492-55013511 | None:intergenic | 40.0% | |
| GATTGCAAAGTGTATATGGC+TGG | - | chr7.4:55016549-55016568 | None:intergenic | 40.0% | |
| GCGAGATATTCGAATGCATT+GGG | - | chr7.4:55014457-55014476 | None:intergenic | 40.0% | |
| GTTAGGTGTTTCGTACTCAA+AGG | - | chr7.4:55015490-55015509 | None:intergenic | 40.0% | |
| TACGTGCATAAGAGATCCAT+CGG | - | chr7.4:55013467-55013486 | None:intergenic | 40.0% | |
| TAGGAAAAAGGTCGACATCA+GGG | - | chr7.4:55014566-55014585 | None:intergenic | 40.0% | |
| TAGTATACTTATGGGGCTGA+AGG | - | chr7.4:55014353-55014372 | None:intergenic | 40.0% | |
| TATAGGTCTGCAGTTCATGA+AGG | - | chr7.4:55014782-55014801 | None:intergenic | 40.0% | |
| TCACAGTACTGTAAGTCAGT+TGG | + | chr7.4:55015265-55015284 | MS.gene054512:intron | 40.0% | |
| TCATGAACTGCAGACCTATA+AGG | + | chr7.4:55014782-55014801 | MS.gene054512:intron | 40.0% | |
| TCTTCGGTATGATGATTGGT+TGG | + | chr7.4:55016209-55016228 | MS.gene054512:intron | 40.0% | |
| TGCTGCTAAGTATGGTAACA+TGG | + | chr7.4:55016959-55016978 | MS.gene054512:CDS | 40.0% | |
| TGTATAACATTTGCCGCTGT+TGG | - | chr7.4:55015919-55015938 | None:intergenic | 40.0% | |
| TGTTCAAGAATGTCAGCACA+AGG | + | chr7.4:55016686-55016705 | MS.gene054512:intron | 40.0% | |
| TTCGACCTTACTATCGTTGA+TGG | - | chr7.4:55016868-55016887 | None:intergenic | 40.0% | |
| ! | AAATGGTTTGTGTTGTGGGT+TGG | - | chr7.4:55016629-55016648 | None:intergenic | 40.0% |
| ! | ACATCAGGGTTAGTAAAGAG+AGG | - | chr7.4:55014552-55014571 | None:intergenic | 40.0% |
| ! | ATCTCGCCATGTTGTCTTTT+GGG | + | chr7.4:55014470-55014489 | MS.gene054512:CDS | 40.0% |
| ! | ATGAAGTGCTTCCCAAACTA+AGG | - | chr7.4:55015843-55015862 | None:intergenic | 40.0% |
| ! | ATTGATGATCGATGTGGTAG+TGG | + | chr7.4:55016909-55016928 | MS.gene054512:CDS | 40.0% |
| ! | CAGTGTTTTCCACCTTAGTT+TGG | + | chr7.4:55015828-55015847 | MS.gene054512:intron | 40.0% |
| ! | CATGTGTGTCACTAGGAAAA+AGG | - | chr7.4:55014578-55014597 | None:intergenic | 40.0% |
| ! | CTTGTCATTTCTTAGTGAGC+AGG | + | chr7.4:55014056-55014075 | MS.gene054512:intron | 40.0% |
| ! | TACTCAAAGGAATTGGCTCA+GGG | - | chr7.4:55015477-55015496 | None:intergenic | 40.0% |
| ! | TATCTCGCCATGTTGTCTTT+TGG | + | chr7.4:55014469-55014488 | MS.gene054512:CDS | 40.0% |
| ! | TTTAGCATGAGCTGGGATTT+TGG | - | chr7.4:55016251-55016270 | None:intergenic | 40.0% |
| !! | ACACACACTGATGATGGTAT+AGG | - | chr7.4:55016049-55016068 | None:intergenic | 40.0% |
| !! | CACAAGGAGAGTATTGTCAA+AGG | + | chr7.4:55016702-55016721 | MS.gene054512:intron | 40.0% |
| !! | CACACACTGATGATGGTATA+GGG | - | chr7.4:55016048-55016067 | None:intergenic | 40.0% |
| !! | CGAAGCTTCAAGTTGTAAAG+AGG | + | chr7.4:55016884-55016903 | MS.gene054512:CDS | 40.0% |
| !! | CGTTCTGAAGATGTAACTTC+AGG | + | chr7.4:55016807-55016826 | MS.gene054512:intron | 40.0% |
| !! | GGTGGATTTCTTACCCTTTT+AGG | - | chr7.4:55014717-55014736 | None:intergenic | 40.0% |
| AAAATACCGAGAACCTCCCA+TGG | - | chr7.4:55013974-55013993 | None:intergenic | 45.0% | |
| AACGCAAGTTACTCCAACAG+CGG | + | chr7.4:55015903-55015922 | MS.gene054512:intron | 45.0% | |
| AAGAGAGGAGTGGAAGTAGA+CGG | - | chr7.4:55014537-55014556 | None:intergenic | 45.0% | |
| AAGCTGAGATAAGCATGGCA+CGG | - | chr7.4:55014167-55014186 | None:intergenic | 45.0% | |
| AAGTGCTTCCCAAACTAAGG+TGG | - | chr7.4:55015840-55015859 | None:intergenic | 45.0% | |
| ACATTACCAAGGACAGAGGA+AGG | - | chr7.4:55014252-55014271 | None:intergenic | 45.0% | |
| ACCAGAGGCTTATTAGATGG+AGG | - | chr7.4:55014894-55014913 | None:intergenic | 45.0% | |
| ACGACGATGCCAAAGTTGAA+TGG | - | chr7.4:55013751-55013770 | None:intergenic | 45.0% | |
| ACGTGTACGATGATGATCTG+AGG | + | chr7.4:55017036-55017055 | MS.gene054512:CDS | 45.0% | |
| AGAGACATTACCAAGGACAG+AGG | - | chr7.4:55014256-55014275 | None:intergenic | 45.0% | |
| ATCAACAAGGTCCCATGTGT+GGG | - | chr7.4:55014871-55014890 | None:intergenic | 45.0% | |
| CACCACTGAGCTTCCTAAAA+GGG | + | chr7.4:55014701-55014720 | MS.gene054512:CDS | 45.0% | |
| CAGTTCGGAATATATCTGCC+AGG | - | chr7.4:55015983-55016002 | None:intergenic | 45.0% | |
| CATCCTGCTATATGCAGCTA+CGG | + | chr7.4:55017067-55017086 | MS.gene054512:CDS | 45.0% | |
| CATTACCAAGGACAGAGGAA+GGG | - | chr7.4:55014251-55014270 | None:intergenic | 45.0% | |
| CCAATGGGCACTTACACAAA+TGG | + | chr7.4:55015091-55015110 | MS.gene054512:intron | 45.0% | |
| CCATCTAATAAGCCTCTGGT+AGG | + | chr7.4:55014894-55014913 | MS.gene054512:intron | 45.0% | |
| CCATTTGTGTAAGTGCCCAT+TGG | - | chr7.4:55015094-55015113 | None:intergenic | 45.0% | |
| CCTACCAGAGGCTTATTAGA+TGG | - | chr7.4:55014897-55014916 | None:intergenic | 45.0% | |
| CGTCTAGCCCATAGTTCAAT+TGG | + | chr7.4:55013768-55013787 | MS.gene054512:intron | 45.0% | |
| CTAGGAAAAAGGTCGACATC+AGG | - | chr7.4:55014567-55014586 | None:intergenic | 45.0% | |
| CTTCATACCTCTATTCGTGC+AGG | + | chr7.4:55016145-55016164 | MS.gene054512:CDS | 45.0% | |
| GGAACAACATCATCAGGAGT+GGG | - | chr7.4:55014660-55014679 | None:intergenic | 45.0% | |
| GGCGAGATATTCGAATGCAT+TGG | - | chr7.4:55014458-55014477 | None:intergenic | 45.0% | |
| GGTTATGGGACTGAACACAA+AGG | + | chr7.4:55014408-55014427 | MS.gene054512:CDS | 45.0% | |
| GTGCAGGTTGCTCTTGTATT+TGG | + | chr7.4:55016161-55016180 | MS.gene054512:intron | 45.0% | |
| GTGCTCTTCGGTATGATGAT+TGG | + | chr7.4:55016205-55016224 | MS.gene054512:intron | 45.0% | |
| GTTTATATGCATCCTCCTCC+AGG | + | chr7.4:55015155-55015174 | MS.gene054512:intron | 45.0% | |
| TATATGGACAGCGGTAAGAG+CGG | - | chr7.4:55014217-55014236 | None:intergenic | 45.0% | |
| TCCTCCAGGTTATACTTGTC+AGG | + | chr7.4:55015169-55015188 | MS.gene054512:intron | 45.0% | |
| TCCTCCATCTAATAAGCCTC+TGG | + | chr7.4:55014890-55014909 | MS.gene054512:intron | 45.0% | |
| TCCTGACAAGTATAACCTGG+AGG | - | chr7.4:55015173-55015192 | None:intergenic | 45.0% | |
| TGACAAGTATAACCTGGAGG+AGG | - | chr7.4:55015170-55015189 | None:intergenic | 45.0% | |
| TGGAACAACATCATCAGGAG+TGG | - | chr7.4:55014661-55014680 | None:intergenic | 45.0% | |
| TGGACGCGAAAATTCAGACA+AGG | - | chr7.4:55014085-55014104 | None:intergenic | 45.0% | |
| TTAAGCAAGCACCTCAGACT+TGG | + | chr7.4:55015231-55015250 | MS.gene054512:intron | 45.0% | |
| TTCTTGTCCAGAACACGCAT+GGG | + | chr7.4:55014185-55014204 | MS.gene054512:CDS | 45.0% | |
| TTTCCTAGTGACACACATGC+AGG | + | chr7.4:55014579-55014598 | MS.gene054512:CDS | 45.0% | |
| ! | AGGGTTAGTAAAGAGAGGAG+TGG | - | chr7.4:55014547-55014566 | None:intergenic | 45.0% |
| ! | GAGGTCATTGATGATCGATG+TGG | + | chr7.4:55016903-55016922 | MS.gene054512:CDS | 45.0% |
| ! | GTACTCAAAGGAATTGGCTC+AGG | - | chr7.4:55015478-55015497 | None:intergenic | 45.0% |
| !! | ATCAGGAGTGGGTTGAACAT+CGG | - | chr7.4:55014649-55014668 | None:intergenic | 45.0% |
| !! | CATGGACTGGACAACTCATA+GGG | + | chr7.4:55013637-55013656 | MS.gene054512:CDS | 45.0% |
| !! | GTCATAGCTTGCTACCAATG+AGG | - | chr7.4:55014822-55014841 | None:intergenic | 45.0% |
| !! | TACCCTTTTAGGAAGCTCAG+TGG | - | chr7.4:55014706-55014725 | None:intergenic | 45.0% |
| !! | TTTGTGTTGTGGGTTGGTAG+TGG | - | chr7.4:55016623-55016642 | None:intergenic | 45.0% |
| !!! | GCTCGTCTGTGTTGTTTTCT+TGG | + | chr7.4:55014387-55014406 | MS.gene054512:CDS | 45.0% |
| AAACAACACAGACGAGCACG+AGG | - | chr7.4:55014384-55014403 | None:intergenic | 50.0% | |
| AAAGCTCGTCAAGTGGCCAA+AGG | + | chr7.4:55014972-55014991 | MS.gene054512:intron | 50.0% | |
| ACTGGACAACTCATAGGGAC+TGG | + | chr7.4:55013642-55013661 | MS.gene054512:CDS | 50.0% | |
| AGAGAGGAGTGGAAGTAGAC+GGG | - | chr7.4:55014536-55014555 | None:intergenic | 50.0% | |
| AGAGCAACCTGCACGAATAG+AGG | - | chr7.4:55016155-55016174 | None:intergenic | 50.0% | |
| CCACCACTGAGCTTCCTAAA+AGG | + | chr7.4:55014700-55014719 | MS.gene054512:CDS | 50.0% | |
| CCTATGAGTTGTCCAGTCCA+TGG | - | chr7.4:55013639-55013658 | None:intergenic | 50.0% | |
| CTGGACAACTCATAGGGACT+GGG | + | chr7.4:55013643-55013662 | MS.gene054512:CDS | 50.0% | |
| CTTCTTGTCCAGAACACGCA+TGG | + | chr7.4:55014184-55014203 | MS.gene054512:CDS | 50.0% | |
| GATCAACAAGGTCCCATGTG+TGG | - | chr7.4:55014872-55014891 | None:intergenic | 50.0% | |
| GCGATACAAAGCTCGTCAAG+TGG | + | chr7.4:55014965-55014984 | MS.gene054512:intron | 50.0% | |
| GCTGCATATAGCAGGATGTG+TGG | - | chr7.4:55017065-55017084 | None:intergenic | 50.0% | |
| GGCGAAAAGAGTTCGAACTG+AGG | - | chr7.4:55015057-55015076 | None:intergenic | 50.0% | |
| GGTTGAACATCGGAAGAGGT+TGG | - | chr7.4:55014639-55014658 | None:intergenic | 50.0% | |
| GTTGGCCAATTCTGTGACCT+TGG | + | chr7.4:55013570-55013589 | MS.gene054512:intron | 50.0% | |
| TAAGAGATCCATCGGCAGTG+TGG | - | chr7.4:55013459-55013478 | None:intergenic | 50.0% | |
| TCTTGTCCAGAACACGCATG+GGG | + | chr7.4:55014186-55014205 | MS.gene054512:CDS | 50.0% | |
| TGGCTCAGGGACAAAAGGAA+GGG | - | chr7.4:55015464-55015483 | None:intergenic | 50.0% | |
| TGTCCGTAGCTGCATATAGC+AGG | - | chr7.4:55017073-55017092 | None:intergenic | 50.0% | |
| TTGCGTCCTCTAGTGTCTCA+AGG | + | chr7.4:55013795-55013814 | MS.gene054512:intron | 50.0% | |
| TTGGCTCAGGGACAAAAGGA+AGG | - | chr7.4:55015465-55015484 | None:intergenic | 50.0% | |
| ! | CAAAGTTGGTCCTCTTCGCA+AGG | + | chr7.4:55015196-55015215 | MS.gene054512:intron | 50.0% |
| ! | CCATAAAGTGCCTTGCGAAG+AGG | - | chr7.4:55015209-55015228 | None:intergenic | 50.0% |
| ! | CCTCTTCGCAAGGCACTTTA+TGG | + | chr7.4:55015206-55015225 | MS.gene054512:intron | 50.0% |
| ! | GAACCTGCATGTGTGTCACT+AGG | - | chr7.4:55014585-55014604 | None:intergenic | 50.0% |
| ! | GGAATTGGCTCAGGGACAAA+AGG | - | chr7.4:55015469-55015488 | None:intergenic | 50.0% |
| ! | TTAGGAAGCTCAGTGGTGGA+TGG | - | chr7.4:55014699-55014718 | None:intergenic | 50.0% |
| !! | AGTGGGTTGAACATCGGAAG+AGG | - | chr7.4:55014643-55014662 | None:intergenic | 50.0% |
| !! | CCATGGACTGGACAACTCAT+AGG | + | chr7.4:55013636-55013655 | MS.gene054512:CDS | 50.0% |
| !! | CCTTTTAGGAAGCTCAGTGG+TGG | - | chr7.4:55014703-55014722 | None:intergenic | 50.0% |
| !! | GTAGTGGCAGTGATAGTGGT+AGG | + | chr7.4:55016925-55016944 | MS.gene054512:CDS | 50.0% |
| !! | TGTGGTAGTGGCAGTGATAG+TGG | + | chr7.4:55016921-55016940 | MS.gene054512:CDS | 50.0% |
| ACCCACTTGCATCCTACCAG+AGG | - | chr7.4:55014909-55014928 | None:intergenic | 55.0% | |
| AGAACCTCCCATGGTAGGTG+TGG | - | chr7.4:55013965-55013984 | None:intergenic | 55.0% | |
| AGCCTCTGGTAGGATGCAAG+TGG | + | chr7.4:55014904-55014923 | MS.gene054512:intron | 55.0% | |
| ATCCTGCACACGACATCCAG+AGG | - | chr7.4:55013616-55013635 | None:intergenic | 55.0% | |
| CACCTACCATGGGAGGTTCT+CGG | + | chr7.4:55013965-55013984 | MS.gene054512:intron | 55.0% | |
| CATTGCAGCCTCTCGCCAAT+GGG | + | chr7.4:55015076-55015095 | MS.gene054512:intron | 55.0% | |
| CCATCGGCAGTGTGGATAGA+AGG | - | chr7.4:55013451-55013470 | None:intergenic | 55.0% | |
| CCTTCTATCCACACTGCCGA+TGG | + | chr7.4:55013448-55013467 | MS.gene054512:CDS | 55.0% | |
| GAACCTCCCATGGTAGGTGT+GGG | - | chr7.4:55013964-55013983 | None:intergenic | 55.0% | |
| GATGTCGTGTGCAGGATCCA+TGG | + | chr7.4:55013619-55013638 | MS.gene054512:intron | 55.0% | |
| GCCTCTGGTAGGATGCAAGT+GGG | + | chr7.4:55014905-55014924 | MS.gene054512:intron | 55.0% | |
| GGACTGGGCGTAAGATCAGA+AGG | + | chr7.4:55013658-55013677 | MS.gene054512:intron | 55.0% | |
| TACCGAGAACCTCCCATGGT+AGG | - | chr7.4:55013970-55013989 | None:intergenic | 55.0% | |
| TGTAAGTGCCCATTGGCGAG+AGG | - | chr7.4:55015087-55015106 | None:intergenic | 55.0% | |
| TTCCTCTGGATGTCGTGTGC+AGG | + | chr7.4:55013611-55013630 | MS.gene054512:intron | 55.0% | |
| !! | GGGTTGGTAGTGGAAGACGA+GGG | - | chr7.4:55016613-55016632 | None:intergenic | 55.0% |
| !! | TGGGTTGGTAGTGGAAGACG+AGG | - | chr7.4:55016614-55016633 | None:intergenic | 55.0% |
| ACTGAGGTAATGCGCGCCAC+AGG | - | chr7.4:55015041-55015060 | None:intergenic | 60.0% | |
| CCATTGCAGCCTCTCGCCAA+TGG | + | chr7.4:55015075-55015094 | MS.gene054512:intron | 60.0% | |
| CCATTGGCGAGAGGCTGCAA+TGG | - | chr7.4:55015078-55015097 | None:intergenic | 60.0% | |
| CCTGCTCCCACACCTACCAT+GGG | + | chr7.4:55013955-55013974 | MS.gene054512:intron | 60.0% | |
| CGTCTCCCTTCCTCTGTCCT+TGG | + | chr7.4:55014243-55014262 | MS.gene054512:CDS | 60.0% | |
| CGTGTGCAGGATCCATGGAC+TGG | + | chr7.4:55013624-55013643 | MS.gene054512:intron | 60.0% | |
| GCTTCACCCCATGCGTGTTC+TGG | - | chr7.4:55014195-55014214 | None:intergenic | 60.0% | |
| TCCTGCTCCCACACCTACCA+TGG | + | chr7.4:55013954-55013973 | MS.gene054512:intron | 60.0% | |
| CCCATGGTAGGTGTGGGAGC+AGG | - | chr7.4:55013958-55013977 | None:intergenic | 65.0% | |
| GCTCCCACACCTACCATGGG+AGG | + | chr7.4:55013958-55013977 | MS.gene054512:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 55013397 | 55017220 | 55013397 | ID=MS.gene054512 |
| chr7.4 | mRNA | 55013397 | 55017220 | 55013397 | ID=MS.gene054512.t1;Parent=MS.gene054512 |
| chr7.4 | exon | 55013397 | 55013483 | 55013397 | ID=MS.gene054512.t1.exon1;Parent=MS.gene054512.t1 |
| chr7.4 | CDS | 55013397 | 55013483 | 55013397 | ID=cds.MS.gene054512.t1;Parent=MS.gene054512.t1 |
| chr7.4 | exon | 55013633 | 55013666 | 55013633 | ID=MS.gene054512.t1.exon2;Parent=MS.gene054512.t1 |
| chr7.4 | CDS | 55013633 | 55013666 | 55013633 | ID=cds.MS.gene054512.t1;Parent=MS.gene054512.t1 |
| chr7.4 | exon | 55014163 | 55014722 | 55014163 | ID=MS.gene054512.t1.exon3;Parent=MS.gene054512.t1 |
| chr7.4 | CDS | 55014163 | 55014722 | 55014163 | ID=cds.MS.gene054512.t1;Parent=MS.gene054512.t1 |
| chr7.4 | exon | 55016097 | 55016166 | 55016097 | ID=MS.gene054512.t1.exon4;Parent=MS.gene054512.t1 |
| chr7.4 | CDS | 55016097 | 55016166 | 55016097 | ID=cds.MS.gene054512.t1;Parent=MS.gene054512.t1 |
| chr7.4 | exon | 55016829 | 55017220 | 55016829 | ID=MS.gene054512.t1.exon5;Parent=MS.gene054512.t1 |
| chr7.4 | CDS | 55016829 | 55017220 | 55016829 | ID=cds.MS.gene054512.t1;Parent=MS.gene054512.t1 |
| Gene Sequence |
| Protein sequence |
