Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054760.t1 | AES97184.2 | 96.1 | 437 | 17 | 0 | 1 | 437 | 64 | 500 | 2.10E-240 | 841.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054760.t1 | Q94JW8 | 34.7 | 461 | 188 | 15 | 1 | 421 | 1 | 388 | 5.9e-50 | 199.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054760.t1 | G7JX04 | 96.1 | 437 | 17 | 0 | 1 | 437 | 64 | 500 | 1.5e-240 | 841.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054760.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054760.t1 | MTR_5g046670 | 96.110 | 437 | 17 | 0 | 1 | 437 | 64 | 500 | 0.0 | 853 |
| MS.gene054760.t1 | MTR_2g461920 | 40.217 | 368 | 190 | 11 | 1 | 354 | 1 | 352 | 9.32e-62 | 209 |
| MS.gene054760.t1 | MTR_4g109770 | 49.333 | 225 | 82 | 8 | 111 | 322 | 56 | 261 | 4.62e-52 | 182 |
| MS.gene054760.t1 | MTR_3g099080 | 46.753 | 154 | 77 | 2 | 131 | 279 | 43 | 196 | 1.39e-37 | 140 |
| MS.gene054760.t1 | MTR_3g085180 | 49.265 | 136 | 66 | 1 | 121 | 256 | 108 | 240 | 3.10e-37 | 141 |
| MS.gene054760.t1 | MTR_8g096780 | 47.712 | 153 | 75 | 3 | 131 | 279 | 45 | 196 | 6.42e-36 | 136 |
| MS.gene054760.t1 | MTR_1g053715 | 59.434 | 106 | 42 | 1 | 179 | 283 | 72 | 177 | 1.40e-35 | 134 |
| MS.gene054760.t1 | MTR_4g088555 | 60.638 | 94 | 34 | 1 | 166 | 259 | 51 | 141 | 7.80e-35 | 127 |
| MS.gene054760.t1 | MTR_7g444860 | 73.077 | 78 | 21 | 0 | 181 | 258 | 149 | 226 | 1.45e-34 | 131 |
| MS.gene054760.t1 | MTR_2g014200 | 66.667 | 84 | 28 | 0 | 176 | 259 | 59 | 142 | 9.92e-34 | 124 |
| MS.gene054760.t1 | MTR_7g092930 | 70.130 | 77 | 23 | 0 | 179 | 255 | 66 | 142 | 2.50e-33 | 128 |
| MS.gene054760.t1 | MTR_8g005960 | 61.458 | 96 | 33 | 1 | 165 | 256 | 167 | 262 | 4.25e-33 | 127 |
| MS.gene054760.t1 | MTR_7g028740 | 57.000 | 100 | 43 | 0 | 180 | 279 | 76 | 175 | 6.04e-33 | 128 |
| MS.gene054760.t1 | MTR_2g046550 | 62.766 | 94 | 34 | 1 | 166 | 258 | 123 | 216 | 1.66e-32 | 131 |
| MS.gene054760.t1 | MTR_2g078770 | 68.831 | 77 | 24 | 0 | 178 | 254 | 55 | 131 | 1.04e-31 | 119 |
| MS.gene054760.t1 | MTR_1g086250 | 61.798 | 89 | 34 | 0 | 166 | 254 | 132 | 220 | 4.38e-31 | 127 |
| MS.gene054760.t1 | MTR_1g035010 | 63.441 | 93 | 33 | 1 | 167 | 258 | 89 | 181 | 9.63e-31 | 125 |
| MS.gene054760.t1 | MTR_8g463140 | 67.105 | 76 | 25 | 0 | 179 | 254 | 63 | 138 | 1.30e-30 | 116 |
| MS.gene054760.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 1.76e-30 | 125 |
| MS.gene054760.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 2.52e-30 | 124 |
| MS.gene054760.t1 | MTR_8g080680 | 42.063 | 126 | 72 | 1 | 130 | 254 | 80 | 205 | 1.59e-27 | 113 |
| MS.gene054760.t1 | MTR_8g080690 | 41.333 | 150 | 82 | 2 | 107 | 256 | 83 | 226 | 2.85e-27 | 112 |
| MS.gene054760.t1 | MTR_8g080670 | 60.000 | 75 | 30 | 0 | 179 | 253 | 160 | 234 | 9.55e-26 | 108 |
| MS.gene054760.t1 | MTR_2g020620 | 49.275 | 69 | 35 | 0 | 190 | 258 | 99 | 167 | 5.46e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054760.t1 | AT1G69170 | 34.707 | 461 | 188 | 16 | 1 | 421 | 1 | 388 | 1.13e-61 | 206 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 8.71e-35 | 132 |
| MS.gene054760.t1 | AT5G50670 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.72e-35 | 133 |
| MS.gene054760.t1 | AT5G50670 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.72e-35 | 133 |
| MS.gene054760.t1 | AT5G50570 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.72e-35 | 133 |
| MS.gene054760.t1 | AT5G50570 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.72e-35 | 133 |
| MS.gene054760.t1 | AT2G42200 | 74.359 | 78 | 20 | 0 | 179 | 256 | 72 | 149 | 1.49e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.29e-34 | 132 |
| MS.gene054760.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 2.49e-33 | 133 |
| MS.gene054760.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 2.63e-33 | 133 |
| MS.gene054760.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
| MS.gene054760.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
| MS.gene054760.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
| MS.gene054760.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 4.57e-33 | 129 |
| MS.gene054760.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 4.57e-33 | 129 |
| MS.gene054760.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 4.57e-33 | 129 |
| MS.gene054760.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 4.57e-33 | 129 |
| MS.gene054760.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 7.18e-33 | 132 |
| MS.gene054760.t1 | AT3G57920 | 63.265 | 98 | 34 | 1 | 181 | 276 | 59 | 156 | 1.21e-32 | 127 |
| MS.gene054760.t1 | AT2G33810 | 65.823 | 79 | 27 | 0 | 180 | 258 | 53 | 131 | 2.06e-32 | 120 |
| MS.gene054760.t1 | AT1G20980 | 46.043 | 139 | 53 | 2 | 167 | 305 | 106 | 222 | 2.08e-32 | 130 |
| MS.gene054760.t1 | AT3G60030 | 37.900 | 219 | 126 | 4 | 160 | 378 | 106 | 314 | 3.27e-32 | 130 |
| MS.gene054760.t1 | AT1G02065 | 52.174 | 115 | 51 | 1 | 144 | 254 | 147 | 261 | 5.04e-32 | 124 |
| MS.gene054760.t1 | AT2G47070 | 72.000 | 75 | 21 | 0 | 180 | 254 | 105 | 179 | 5.43e-31 | 126 |
| MS.gene054760.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 1.99e-29 | 113 |
| MS.gene054760.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 1.99e-29 | 113 |
| MS.gene054760.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 2.49e-29 | 113 |
| MS.gene054760.t1 | AT3G15270 | 64.000 | 75 | 27 | 0 | 180 | 254 | 62 | 136 | 3.01e-29 | 113 |
| MS.gene054760.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.46e-20 | 95.1 |
| MS.gene054760.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.67e-20 | 94.7 |
| MS.gene054760.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.77e-20 | 94.7 |
| MS.gene054760.t1 | AT2G47070 | 74.000 | 50 | 13 | 0 | 205 | 254 | 1 | 50 | 2.13e-18 | 88.2 |
| MS.gene054760.t1 | AT1G02065 | 46.154 | 91 | 41 | 2 | 144 | 228 | 147 | 235 | 8.12e-17 | 80.1 |
Find 80 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTGTATGCCAAGTTTA+TGG | 0.217464 | 5.3:-33896667 | MS.gene054760:CDS |
| AACAAATAGCTTCTCTCTTC+AGG | 0.222642 | 5.3:+33897177 | None:intergenic |
| TCTAGTTGAGGGCTGCAAAT+TGG | 0.232543 | 5.3:+33893496 | None:intergenic |
| CACTTCTAGCTTACCTGCTT+TGG | 0.255243 | 5.3:-33896689 | MS.gene054760:CDS |
| GATTTCCTATGGAGGCTTCT+AGG | 0.288922 | 5.3:-33897005 | MS.gene054760:CDS |
| TAGAGAGGTAGTTAAAAGTA+TGG | 0.306378 | 5.3:-33897043 | MS.gene054760:CDS |
| TCCATGTGGGATAAACTCTA+AGG | 0.320657 | 5.3:-33893260 | MS.gene054760:CDS |
| GAAGCAAAGAAATTCTGTTT+TGG | 0.338535 | 5.3:-33893167 | MS.gene054760:CDS |
| CTGATGGATTTCCTGCTGTT+TGG | 0.343509 | 5.3:+33893395 | None:intergenic |
| TTTGCTTCTCCACCCTTTGA+AGG | 0.344895 | 5.3:+33893182 | None:intergenic |
| CTAGTTGAGGGCTGCAAATT+GGG | 0.359645 | 5.3:+33893497 | None:intergenic |
| TTCTAGGACTGTTCGTGGTT+CGG | 0.369527 | 5.3:-33896989 | MS.gene054760:CDS |
| AAGTATGGAATTTGTGGACT+TGG | 0.383614 | 5.3:-33897028 | MS.gene054760:CDS |
| AATTTGTAGTAATGGAATCT+TGG | 0.388699 | 5.3:-33897209 | None:intergenic |
| AATTGTCTTCTAACCTTCAA+AGG | 0.400965 | 5.3:-33893195 | MS.gene054760:CDS |
| TCATTGATTGATTTGAAGCT+AGG | 0.417700 | 5.3:-33896814 | MS.gene054760:CDS |
| GACGATAACTTTAGCTGTCT+TGG | 0.422044 | 5.3:+33896579 | None:intergenic |
| TTAGTAGATTGTCAAGGTGT+GGG | 0.426117 | 5.3:-33896787 | MS.gene054760:CDS |
| TTCTTGAATTAGGTTCCATC+TGG | 0.429111 | 5.3:-33895988 | MS.gene054760:intron |
| GCTAGAAGTGCGGGATCTCT+TGG | 0.433355 | 5.3:+33896702 | None:intergenic |
| GCTAACACGCTTTGATGAAT+CGG | 0.443304 | 5.3:+33896724 | None:intergenic |
| TGTGGACTTGGGATTTCCTA+TGG | 0.444151 | 5.3:-33897016 | MS.gene054760:CDS |
| TAGAAAACCCTTAGTTGAAT+GGG | 0.448095 | 5.3:-33897112 | MS.gene054760:CDS |
| AGTTAAAAGTATGGAATTTG+TGG | 0.448427 | 5.3:-33897034 | MS.gene054760:CDS |
| GCTGTTTCTCAAACGTGTAA+AGG | 0.456116 | 5.3:-33893123 | None:intergenic |
| CAACCATAAACTTGGCATAC+AGG | 0.459443 | 5.3:+33896664 | None:intergenic |
| TCAAAGTGGACATATCAAAC+TGG | 0.462398 | 5.3:-33893527 | MS.gene054760:CDS |
| CCATGTTACAACCATAAACT+TGG | 0.470816 | 5.3:+33896656 | None:intergenic |
| GTAGAAAACCCTTAGTTGAA+TGG | 0.471526 | 5.3:-33897113 | MS.gene054760:CDS |
| AGTATGGAATTTGTGGACTT+GGG | 0.478417 | 5.3:-33897027 | MS.gene054760:CDS |
| TCAAAGGTGTTTCAGAAACT+TGG | 0.479177 | 5.3:+33893323 | None:intergenic |
| ACAAATAGCTTCTCTCTTCA+GGG | 0.479898 | 5.3:+33897178 | None:intergenic |
| AAAAGCAATAACATGGATAG+AGG | 0.481057 | 5.3:+33896912 | None:intergenic |
| ATTGTCTTCTAACCTTCAAA+GGG | 0.489133 | 5.3:-33893194 | MS.gene054760:CDS |
| TATCTTGAGTGCGGATGTCC+CGG | 0.493515 | 5.3:+33893353 | None:intergenic |
| CCTCGAAAGATTACCACAAA+AGG | 0.498780 | 5.3:-33896624 | MS.gene054760:CDS |
| TTTCCTGCTGTTTGGTGCGA+CGG | 0.501630 | 5.3:+33893403 | None:intergenic |
| ACAGCTAAAGTTATCGTCAA+TGG | 0.504384 | 5.3:-33896574 | MS.gene054760:CDS |
| ACTTTGAAATATGTCTTGAA+AGG | 0.507641 | 5.3:+33893585 | None:intergenic |
| CATTGATTGATTTGAAGCTA+GGG | 0.508340 | 5.3:-33896813 | MS.gene054760:CDS |
| GAGGCTTCTAGGACTGTTCG+TGG | 0.514115 | 5.3:-33896994 | MS.gene054760:CDS |
| TTCGCAGAGCTTGTCATCAA+AGG | 0.516063 | 5.3:+33893307 | None:intergenic |
| AGCAGGTAAGCTAGAAGTGC+GGG | 0.516979 | 5.3:+33896693 | None:intergenic |
| ATGGTAAGCGCAGTTGTCGC+AGG | 0.518129 | 5.3:-33895950 | MS.gene054760:CDS |
| TAGCGGGCACTTCTAGTTGA+GGG | 0.519257 | 5.3:+33893485 | None:intergenic |
| AATTCGTGTCCATGTGTAGC+GGG | 0.520740 | 5.3:+33893469 | None:intergenic |
| TCCTTAGAGTTTATCCCACA+TGG | 0.525879 | 5.3:+33893259 | None:intergenic |
| GACATCCGCACTCAAGATAG+AGG | 0.528344 | 5.3:-33893349 | MS.gene054760:CDS |
| AATCGAACTGAGGTTTCCTT+CGG | 0.529739 | 5.3:+33895904 | None:intergenic |
| AAAGTACTGGCAGTAGCTGA+TGG | 0.532169 | 5.3:+33893379 | None:intergenic |
| TCAGACATCTAGCTGTGAGC+TGG | 0.532209 | 5.3:-33896965 | MS.gene054760:CDS |
| AGTTGTCGCAGGCGTCTAGC+TGG | 0.532617 | 5.3:-33895939 | MS.gene054760:CDS |
| TAGTAGATTGTCAAGGTGTG+GGG | 0.537134 | 5.3:-33896786 | MS.gene054760:CDS |
| AAGATTCTTCAGTCATATCA+AGG | 0.537497 | 5.3:-33895861 | MS.gene054760:intron |
| TGGACATATCAAACTGGAAG+AGG | 0.540218 | 5.3:-33893521 | MS.gene054760:CDS |
| CCAAGTTTATGGTTGTAACA+TGG | 0.549560 | 5.3:-33896656 | MS.gene054760:CDS |
| CTAGAAGTGCCCGCTACACA+TGG | 0.550524 | 5.3:-33893478 | MS.gene054760:CDS |
| GTAGCGGGCACTTCTAGTTG+AGG | 0.554616 | 5.3:+33893484 | None:intergenic |
| AATCCGTCGCACCAAACAGC+AGG | 0.562264 | 5.3:-33893406 | MS.gene054760:CDS |
| ATTAGTAGATTGTCAAGGTG+TGG | 0.566271 | 5.3:-33896788 | MS.gene054760:CDS |
| TTTCAAGACATATTTCAAAG+TGG | 0.566498 | 5.3:-33893583 | MS.gene054760:CDS |
| CTGGACACAATGAGCGCCGA+AGG | 0.574137 | 5.3:-33895920 | MS.gene054760:CDS |
| TGGCATACAGGAGCCAAAGC+AGG | 0.579602 | 5.3:+33896676 | None:intergenic |
| CATGATCAAATCTCTCAAAG+TGG | 0.581788 | 5.3:-33893541 | MS.gene054760:CDS |
| TCATGTAACTTTGAACGAGA+CGG | 0.583364 | 5.3:-33897078 | MS.gene054760:CDS |
| CTGACAGAAGAGAGAGAGCA+TGG | 0.588418 | 5.3:+33893440 | None:intergenic |
| GTCTTCTAACCTTCAAAGGG+TGG | 0.588488 | 5.3:-33893191 | MS.gene054760:CDS |
| CGTCGAACTCAGTTACCAGA+TGG | 0.604322 | 5.3:+33895973 | None:intergenic |
| GGACTTGGGATTTCCTATGG+AGG | 0.614398 | 5.3:-33897013 | MS.gene054760:CDS |
| ACAGTCCTAGAAGCCTCCAT+AGG | 0.615388 | 5.3:+33897000 | None:intergenic |
| ATGAATCAAAAGCAATAACA+TGG | 0.620760 | 5.3:+33896905 | None:intergenic |
| CTAGTCATGTAATCGAACTG+AGG | 0.637565 | 5.3:+33895894 | None:intergenic |
| TCGTCAATGGTGTTGAACAG+AGG | 0.637850 | 5.3:-33896561 | MS.gene054760:CDS |
| GAAATTATTAAATCTGAACA+TGG | 0.656589 | 5.3:-33893238 | MS.gene054760:CDS |
| GGTCGCCTCTATCTTGAGTG+CGG | 0.658611 | 5.3:+33893344 | None:intergenic |
| TAATTCGTGTCCATGTGTAG+CGG | 0.666143 | 5.3:+33893468 | None:intergenic |
| GGGAGATTAGTAGATTGTCA+AGG | 0.666785 | 5.3:-33896793 | MS.gene054760:CDS |
| CTGGTAACTGAGTTCGACGA+TGG | 0.666961 | 5.3:-33895969 | MS.gene054760:CDS |
| AAGCAGGTAAGCTAGAAGTG+CGG | 0.678203 | 5.3:+33896692 | None:intergenic |
| CAATTGAAACAGATCAACAG+TGG | 0.725111 | 5.3:+33893213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATAAATGATTTAAATAA+TGG | + | chr5.3:33895861-33895880 | None:intergenic | 10.0% |
| !! | AGAAATAATAAGATTATAAC+AGG | + | chr5.3:33896624-33896643 | None:intergenic | 15.0% |
| !! | ATAAATGATTTAAATAATGG+TGG | + | chr5.3:33895858-33895877 | None:intergenic | 15.0% |
| !! | TAATAGAAAAATATACCATA+TGG | + | chr5.3:33895242-33895261 | None:intergenic | 15.0% |
| !! | TAATATCTTAGAATTGTTAA+TGG | - | chr5.3:33894239-33894258 | MS.gene054760:intron | 15.0% |
| !! | TATTTCATACAAATTTAGTT+AGG | + | chr5.3:33895433-33895452 | None:intergenic | 15.0% |
| !! | TCAATTACTATAAGAAATTT+GGG | - | chr5.3:33895518-33895537 | MS.gene054760:intron | 15.0% |
| !!! | AAATGTTATTTTAATTCCAA+AGG | + | chr5.3:33893824-33893843 | None:intergenic | 15.0% |
| !!! | TATATTTTTCTATTAGCTTA+TGG | - | chr5.3:33895247-33895266 | MS.gene054760:intron | 15.0% |
| !!! | TTTCAGTTTTTAATAAGATT+TGG | - | chr5.3:33894899-33894918 | MS.gene054760:intron | 15.0% |
| !! | AAAACAATGAAAAAATTGGA+AGG | - | chr5.3:33896372-33896391 | MS.gene054760:intron | 20.0% |
| !! | AAACTAATTTACATCTACAT+AGG | + | chr5.3:33896151-33896170 | None:intergenic | 20.0% |
| !! | ATAAAATTTATAACCCAAGT+GGG | - | chr5.3:33894770-33894789 | MS.gene054760:intron | 20.0% |
| !! | CATATTGAAAGAAAATTGAT+AGG | - | chr5.3:33895140-33895159 | MS.gene054760:intron | 20.0% |
| !! | CATGTAATTTAAAAATCAGA+AGG | - | chr5.3:33895042-33895061 | MS.gene054760:intron | 20.0% |
| !! | GAAATTATTAAATCTGAACA+TGG | - | chr5.3:33897086-33897105 | MS.gene054760:CDS | 20.0% |
| !! | GTCAATTACTATAAGAAATT+TGG | - | chr5.3:33895517-33895536 | MS.gene054760:intron | 20.0% |
| !! | TATAAAATTTATAACCCAAG+TGG | - | chr5.3:33894769-33894788 | MS.gene054760:intron | 20.0% |
| !! | TTAAAATGCAGTTATAAAGT+GGG | + | chr5.3:33896219-33896238 | None:intergenic | 20.0% |
| !! | TTAAACATTTCAAACAAAAG+AGG | - | chr5.3:33895638-33895657 | MS.gene054760:intron | 20.0% |
| !! | TTGTATGAAATATCAATCAT+TGG | - | chr5.3:33895441-33895460 | MS.gene054760:intron | 20.0% |
| !! | TTTCATCGAGTTTATTTATT+AGG | + | chr5.3:33895967-33895986 | None:intergenic | 20.0% |
| !!! | AAACAATTACACTTGTTAAA+TGG | + | chr5.3:33895736-33895755 | None:intergenic | 20.0% |
| !!! | AAACTCTTAAATTCTTTTTC+TGG | + | chr5.3:33893974-33893993 | None:intergenic | 20.0% |
| !!! | AACTCTATTATATTTTGAAG+TGG | + | chr5.3:33894964-33894983 | None:intergenic | 20.0% |
| !!! | AATTTTGCAGTTATTTTCAA+TGG | + | chr5.3:33896486-33896505 | None:intergenic | 20.0% |
| !!! | ATTTTCATTGGATAAGTTAA+AGG | - | chr5.3:33896510-33896529 | MS.gene054760:intron | 20.0% |
| !!! | CGTATTATTTTACTTTCTTA+TGG | - | chr5.3:33894024-33894043 | MS.gene054760:intron | 20.0% |
| !!! | CTTAATTTGAAGTTTTAAAC+TGG | - | chr5.3:33896271-33896290 | MS.gene054760:intron | 20.0% |
| !!! | CTTATTTTTGTTCTTGAATT+AGG | - | chr5.3:33894326-33894345 | MS.gene054760:intron | 20.0% |
| !!! | GAAATATAATTCTAGTTGTT+AGG | + | chr5.3:33894667-33894686 | None:intergenic | 20.0% |
| !!! | GCAAAATTATGAATTTTCAT+TGG | - | chr5.3:33896498-33896517 | MS.gene054760:intron | 20.0% |
| !!! | TATAACTGCATTTTAAAACT+AGG | - | chr5.3:33896223-33896242 | MS.gene054760:intron | 20.0% |
| !!! | TCTGATTTTTAAATTACATG+TGG | + | chr5.3:33895042-33895061 | None:intergenic | 20.0% |
| !!! | TTCCAATTTTTTCATTGTTT+TGG | + | chr5.3:33896373-33896392 | None:intergenic | 20.0% |
| !!! | TTTAAAATGCAGTTATAAAG+TGG | + | chr5.3:33896220-33896239 | None:intergenic | 20.0% |
| !!! | TTTTATCAAAGTCAATATGA+AGG | + | chr5.3:33894858-33894877 | None:intergenic | 20.0% |
| ! | AAATTAAGTTAAAGAATCCC+TGG | + | chr5.3:33896259-33896278 | None:intergenic | 25.0% |
| ! | ACACAAAATCCTAACTAATA+TGG | + | chr5.3:33895092-33895111 | None:intergenic | 25.0% |
| ! | AGAAAGTAAAATAATACGAG+AGG | + | chr5.3:33894022-33894041 | None:intergenic | 25.0% |
| ! | ATAGATAAGACAGCAAAAAT+TGG | - | chr5.3:33894521-33894540 | MS.gene054760:intron | 25.0% |
| ! | ATGAACTGAAATTAAAACCT+TGG | - | chr5.3:33895589-33895608 | MS.gene054760:intron | 25.0% |
| ! | ATGAATCAAAAGCAATAACA+TGG | + | chr5.3:33893422-33893441 | None:intergenic | 25.0% |
| ! | CAATTCATGATTTCAATAGA+AGG | - | chr5.3:33895879-33895898 | MS.gene054760:CDS | 25.0% |
| ! | GAATTGTCAAATAAACTAGA+CGG | + | chr5.3:33894104-33894123 | None:intergenic | 25.0% |
| ! | GTCCAAAACAATGAAAAAAT+TGG | - | chr5.3:33896368-33896387 | MS.gene054760:intron | 25.0% |
| ! | GTTTCTTAACCATATTAGTT+AGG | - | chr5.3:33895080-33895099 | MS.gene054760:intron | 25.0% |
| ! | TCATAGTCTAAATTCTAACA+TGG | - | chr5.3:33894216-33894235 | MS.gene054760:intron | 25.0% |
| ! | TTATGTCTGATAATTAGTTG+CGG | - | chr5.3:33894573-33894592 | MS.gene054760:intron | 25.0% |
| ! | TTGACTTTGATAAAAATCTG+TGG | - | chr5.3:33894863-33894882 | MS.gene054760:intron | 25.0% |
| ! | TTTCAAGACATATTTCAAAG+TGG | - | chr5.3:33896741-33896760 | MS.gene054760:CDS | 25.0% |
| !! | ACTTTCTTATGGTTTTCTTA+GGG | - | chr5.3:33894035-33894054 | MS.gene054760:intron | 25.0% |
| !! | AGTTAAAAGTATGGAATTTG+TGG | - | chr5.3:33893290-33893309 | MS.gene054760:CDS | 25.0% |
| !! | CTTCTTTGATTTATTCGAAT+AGG | - | chr5.3:33893931-33893950 | MS.gene054760:intron | 25.0% |
| !! | CTTTTTAAACGTCAAAATTG+TGG | - | chr5.3:33896328-33896347 | MS.gene054760:intron | 25.0% |
| !! | GATTTTTAAATTACATGTGG+TGG | + | chr5.3:33895039-33895058 | None:intergenic | 25.0% |
| !! | TACTATAAGAAATTTGGGTT+AGG | - | chr5.3:33895523-33895542 | MS.gene054760:intron | 25.0% |
| !! | TACTTTCTTATGGTTTTCTT+AGG | - | chr5.3:33894034-33894053 | MS.gene054760:intron | 25.0% |
| !! | TTACATTTTTACTGTTACTC+TGG | - | chr5.3:33896407-33896426 | MS.gene054760:intron | 25.0% |
| !!! | AAAAACTAGTCTTACAACAT+TGG | + | chr5.3:33895803-33895822 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTGGTAAAGT+GGG | - | chr5.3:33897166-33897185 | MS.gene054760:CDS | 25.0% |
| !!! | AAGGTTTTAATTTCAGTTCA+TGG | + | chr5.3:33895590-33895609 | None:intergenic | 25.0% |
| !!! | ACTCCATCTTTTAATTTTTG+TGG | - | chr5.3:33895691-33895710 | MS.gene054760:intron | 25.0% |
| !!! | ACTTTGAAATATGTCTTGAA+AGG | + | chr5.3:33896742-33896761 | None:intergenic | 25.0% |
| !!! | ACTTTTATAATGGATTTCGA+AGG | + | chr5.3:33894828-33894847 | None:intergenic | 25.0% |
| !!! | ATAGAGTTGATAGATAGATT+AGG | - | chr5.3:33894976-33894995 | MS.gene054760:intron | 25.0% |
| !!! | ATCTTATAATTTAGCCTTAG+AGG | + | chr5.3:33895355-33895374 | None:intergenic | 25.0% |
| !!! | CTATTTGTTTTCTGATGAAA+TGG | - | chr5.3:33893161-33893180 | MS.gene054760:CDS | 25.0% |
| AAAAGCAATAACATGGATAG+AGG | + | chr5.3:33893415-33893434 | None:intergenic | 30.0% | |
| AAGATTCTTCAGTCATATCA+AGG | - | chr5.3:33894463-33894482 | MS.gene054760:intron | 30.0% | |
| AATCAGAAGGTTTCTATTTC+AGG | - | chr5.3:33895055-33895074 | MS.gene054760:intron | 30.0% | |
| AATTCTCAAAAGAACAGATG+AGG | + | chr5.3:33894554-33894573 | None:intergenic | 30.0% | |
| AATTGTCTTCTAACCTTCAA+AGG | - | chr5.3:33897129-33897148 | MS.gene054760:CDS | 30.0% | |
| ACGGAAATATCATTTGTTCA+TGG | + | chr5.3:33894625-33894644 | None:intergenic | 30.0% | |
| ATACTTCTCTTACAATCAGA+TGG | - | chr5.3:33893846-33893865 | MS.gene054760:intron | 30.0% | |
| ATAGCTTAAATCTCTCAAGT+TGG | - | chr5.3:33895282-33895301 | MS.gene054760:intron | 30.0% | |
| ATATTTCCAAATTGCCATCA+TGG | - | chr5.3:33894680-33894699 | MS.gene054760:intron | 30.0% | |
| ATTGTCTTCTAACCTTCAAA+GGG | - | chr5.3:33897130-33897149 | MS.gene054760:CDS | 30.0% | |
| CAAATATCTTATTCCTAGCA+TGG | + | chr5.3:33894740-33894759 | None:intergenic | 30.0% | |
| CTAAAATAAATCTTCCCGAT+GGG | - | chr5.3:33896642-33896661 | MS.gene054760:CDS | 30.0% | |
| CTCTGATCAATTAGTGTATA+TGG | - | chr5.3:33894130-33894149 | MS.gene054760:intron | 30.0% | |
| GGACCACAAAAATTAAAAGA+TGG | + | chr5.3:33895697-33895716 | None:intergenic | 30.0% | |
| TAGAAAACCCTTAGTTGAAT+GGG | - | chr5.3:33893212-33893231 | MS.gene054760:CDS | 30.0% | |
| TAGACTATGAATGACTACTA+TGG | + | chr5.3:33894206-33894225 | None:intergenic | 30.0% | |
| TAGAGAGGTAGTTAAAAGTA+TGG | - | chr5.3:33893281-33893300 | MS.gene054760:CDS | 30.0% | |
| TCTGCTATAAAAGTTTAACG+AGG | - | chr5.3:33896122-33896141 | MS.gene054760:intron | 30.0% | |
| TTCTCTTACACTAAATGTGT+AGG | - | chr5.3:33896702-33896721 | MS.gene054760:CDS | 30.0% | |
| TTGTCTTTCTGTTTGATGTT+TGG | - | chr5.3:33896091-33896110 | MS.gene054760:intron | 30.0% | |
| TTGTGCATAAAAAACTCTGA+TGG | + | chr5.3:33895763-33895782 | None:intergenic | 30.0% | |
| ! | AGATTTGATCATGCTTTTCT+GGG | + | chr5.3:33896776-33896795 | None:intergenic | 30.0% |
| ! | AGGATGCTACACTTTTATAA+TGG | + | chr5.3:33894838-33894857 | None:intergenic | 30.0% |
| ! | GAAGCAAAGAAATTCTGTTT+TGG | - | chr5.3:33897157-33897176 | MS.gene054760:CDS | 30.0% |
| ! | GTTAAACTTTTATAGCAGAC+AGG | + | chr5.3:33896121-33896140 | None:intergenic | 30.0% |
| ! | TAGATTCTTTGCTATATGTG+TGG | + | chr5.3:33896677-33896696 | None:intergenic | 30.0% |
| ! | TCTAAAATAAATCTTCCCGA+TGG | - | chr5.3:33896641-33896660 | MS.gene054760:CDS | 30.0% |
| ! | TCTATTAGCTTATGGTATAC+AGG | - | chr5.3:33895255-33895274 | MS.gene054760:intron | 30.0% |
| ! | TTAGTTAGGATTTTGTGTGA+AGG | - | chr5.3:33895094-33895113 | MS.gene054760:intron | 30.0% |
| ! | TTGTTTTCCCATTCAACTAA+GGG | + | chr5.3:33893222-33893241 | None:intergenic | 30.0% |
| ! | TTTTCTATTAGTAGCCTCTA+AGG | - | chr5.3:33895338-33895357 | MS.gene054760:intron | 30.0% |
| !! | AATAATACGAGAGGTATTGA+TGG | + | chr5.3:33894013-33894032 | None:intergenic | 30.0% |
| !! | CATTGATTGATTTGAAGCTA+GGG | - | chr5.3:33893511-33893530 | MS.gene054760:CDS | 30.0% |
| !! | TCATTGATTGATTTGAAGCT+AGG | - | chr5.3:33893510-33893529 | MS.gene054760:CDS | 30.0% |
| !! | TGCTTTTGATTCATCTTTTG+CGG | - | chr5.3:33893428-33893447 | MS.gene054760:CDS | 30.0% |
| !! | TTTGTTTTCCCATTCAACTA+AGG | + | chr5.3:33893223-33893242 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGACTTTGTGATG+TGG | - | chr5.3:33895214-33895233 | MS.gene054760:intron | 30.0% |
| !!! | GAAATTCTGTTTTGGTAAAG+TGG | - | chr5.3:33897165-33897184 | MS.gene054760:CDS | 30.0% |
| !!! | GGTATATTTTTTGGTTCCTT+TGG | - | chr5.3:33893805-33893824 | MS.gene054760:intron | 30.0% |
| !!! | TTTTAATTTCAGTTCATGGC+AGG | + | chr5.3:33895586-33895605 | None:intergenic | 30.0% |
| !!! | TTTTAATTTTTGTGGTCCCA+GGG | - | chr5.3:33895699-33895718 | MS.gene054760:intron | 30.0% |
| AACAAATAGCTTCTCTCTTC+AGG | + | chr5.3:33893150-33893169 | None:intergenic | 35.0% | |
| AAGTATGGAATTTGTGGACT+TGG | - | chr5.3:33893296-33893315 | MS.gene054760:CDS | 35.0% | |
| AATCCTCATAAACACCATGA+TGG | + | chr5.3:33894697-33894716 | None:intergenic | 35.0% | |
| ACAAATAGCTTCTCTCTTCA+GGG | + | chr5.3:33893149-33893168 | None:intergenic | 35.0% | |
| ACAGCTAAAGTTATCGTCAA+TGG | - | chr5.3:33893750-33893769 | MS.gene054760:intron | 35.0% | |
| AGTATGGAATTTGTGGACTT+GGG | - | chr5.3:33893297-33893316 | MS.gene054760:CDS | 35.0% | |
| ATGTGGTGGTTAAAGATTAG+AGG | + | chr5.3:33895025-33895044 | None:intergenic | 35.0% | |
| ATTAGTAGATTGTCAAGGTG+TGG | - | chr5.3:33893536-33893555 | MS.gene054760:CDS | 35.0% | |
| CAAATAAACTAGACGGCATT+TGG | + | chr5.3:33894097-33894116 | None:intergenic | 35.0% | |
| CATGATCAAATCTCTCAAAG+TGG | - | chr5.3:33896783-33896802 | MS.gene054760:CDS | 35.0% | |
| CATGGTGTTTATGAGGATTT+AGG | - | chr5.3:33894698-33894717 | MS.gene054760:intron | 35.0% | |
| CCAAGTTTATGGTTGTAACA+TGG | - | chr5.3:33893668-33893687 | MS.gene054760:intron | 35.0% | |
| CCATGTTACAACCATAAACT+TGG | + | chr5.3:33893671-33893690 | None:intergenic | 35.0% | |
| GAGTAAAGTGTGTGTACTTA+AGG | - | chr5.3:33896010-33896029 | MS.gene054760:intron | 35.0% | |
| GCAATGTAATGAGCTTTCAT+TGG | + | chr5.3:33896188-33896207 | None:intergenic | 35.0% | |
| GTACACACACTTTACTCTTA+CGG | + | chr5.3:33896007-33896026 | None:intergenic | 35.0% | |
| GTAGAAAACCCTTAGTTGAA+TGG | - | chr5.3:33893211-33893230 | MS.gene054760:CDS | 35.0% | |
| TAAACACCATGATGGCAATT+TGG | + | chr5.3:33894689-33894708 | None:intergenic | 35.0% | |
| TAACTCTATTGAACGCTTCA+CGG | + | chr5.3:33894644-33894663 | None:intergenic | 35.0% | |
| TCAAAGTGGACATATCAAAC+TGG | - | chr5.3:33896797-33896816 | MS.gene054760:CDS | 35.0% | |
| TCATGTAACTTTGAACGAGA+CGG | - | chr5.3:33893246-33893265 | MS.gene054760:CDS | 35.0% | |
| TGATTAATACTCTTCCCTTG+AGG | + | chr5.3:33895309-33895328 | None:intergenic | 35.0% | |
| TTAGTAGATTGTCAAGGTGT+GGG | - | chr5.3:33893537-33893556 | MS.gene054760:CDS | 35.0% | |
| TTCTTGAATTAGGTTCCATC+TGG | - | chr5.3:33894336-33894355 | MS.gene054760:intron | 35.0% | |
| ! | AGTTATAAAGTGGGCTTATG+TGG | + | chr5.3:33896210-33896229 | None:intergenic | 35.0% |
| ! | ATCAAAGAAGTGCAGAAATG+AGG | + | chr5.3:33893921-33893940 | None:intergenic | 35.0% |
| ! | GAAATGAGTCTTTTCCATGT+GGG | - | chr5.3:33897051-33897070 | MS.gene054760:CDS | 35.0% |
| ! | GAAATTTGGGTTAGGTAATG+CGG | - | chr5.3:33895531-33895550 | MS.gene054760:intron | 35.0% |
| ! | GAGATTTGATCATGCTTTTC+TGG | + | chr5.3:33896777-33896796 | None:intergenic | 35.0% |
| ! | TAGGATTTTGTGTGAAGGTA+GGG | - | chr5.3:33895099-33895118 | MS.gene054760:intron | 35.0% |
| ! | TAGGTCATATTTTCCCACTT+GGG | + | chr5.3:33894786-33894805 | None:intergenic | 35.0% |
| ! | TTAGGATTTTGTGTGAAGGT+AGG | - | chr5.3:33895098-33895117 | MS.gene054760:intron | 35.0% |
| ! | TTAGGTCATATTTTCCCACT+TGG | + | chr5.3:33894787-33894806 | None:intergenic | 35.0% |
| !! | TCAAAGGTGTTTCAGAAACT+TGG | + | chr5.3:33897004-33897023 | None:intergenic | 35.0% |
| !!! | AGTGCAGCAGGTATATTTTT+TGG | - | chr5.3:33893796-33893815 | MS.gene054760:intron | 35.0% |
| !!! | CGGTTTTAATTCAGATAGAG+AGG | - | chr5.3:33893266-33893285 | MS.gene054760:CDS | 35.0% |
| !!! | CTTTTAATTTTTGTGGTCCC+AGG | - | chr5.3:33895698-33895717 | MS.gene054760:intron | 35.0% |
| !!! | GAAGGTTTTTTCTGTCACTA+CGG | + | chr5.3:33894810-33894829 | None:intergenic | 35.0% |
| !!! | TTTTTTCTGTCACTACGGTT+AGG | + | chr5.3:33894805-33894824 | None:intergenic | 35.0% |
| AAGTTAAAGAATCCCTGGTG+TGG | + | chr5.3:33896254-33896273 | None:intergenic | 40.0% | |
| AATCGAACTGAGGTTTCCTT+CGG | + | chr5.3:33894423-33894442 | None:intergenic | 40.0% | |
| CAACCATAAACTTGGCATAC+AGG | + | chr5.3:33893663-33893682 | None:intergenic | 40.0% | |
| CAAGACTGGACATTTACAAG+TGG | + | chr5.3:33894266-33894285 | None:intergenic | 40.0% | |
| CAATAGAAGGTCACTGTTGT+TGG | - | chr5.3:33895892-33895911 | MS.gene054760:CDS | 40.0% | |
| CAGAAGGTTTCTATTTCAGG+AGG | - | chr5.3:33895058-33895077 | MS.gene054760:intron | 40.0% | |
| CCTCGAAAGATTACCACAAA+AGG | - | chr5.3:33893700-33893719 | MS.gene054760:intron | 40.0% | |
| CTAGTCATGTAATCGAACTG+AGG | + | chr5.3:33894433-33894452 | None:intergenic | 40.0% | |
| GACGATAACTTTAGCTGTCT+TGG | + | chr5.3:33893748-33893767 | None:intergenic | 40.0% | |
| GCTAACACGCTTTGATGAAT+CGG | + | chr5.3:33893603-33893622 | None:intergenic | 40.0% | |
| GGGAGATTAGTAGATTGTCA+AGG | - | chr5.3:33893531-33893550 | MS.gene054760:CDS | 40.0% | |
| GTTTATGAGGATTTAGGTCC+TGG | - | chr5.3:33894704-33894723 | MS.gene054760:intron | 40.0% | |
| TAATTCGTGTCCATGTGTAG+CGG | + | chr5.3:33896859-33896878 | None:intergenic | 40.0% | |
| TAGCATGGAATAGATAGACC+AGG | + | chr5.3:33894725-33894744 | None:intergenic | 40.0% | |
| TAGTAGATTGTCAAGGTGTG+GGG | - | chr5.3:33893538-33893557 | MS.gene054760:CDS | 40.0% | |
| TCCATGTGGGATAAACTCTA+AGG | - | chr5.3:33897064-33897083 | MS.gene054760:CDS | 40.0% | |
| TCCTTAGAGTTTATCCCACA+TGG | + | chr5.3:33897068-33897087 | None:intergenic | 40.0% | |
| TGCTCTCTTTCTAGATTCCA+AGG | + | chr5.3:33895609-33895628 | None:intergenic | 40.0% | |
| TGGACATATCAAACTGGAAG+AGG | - | chr5.3:33896803-33896822 | MS.gene054760:CDS | 40.0% | |
| TGGTCTATCTATTCCATGCT+AGG | - | chr5.3:33894724-33894743 | MS.gene054760:intron | 40.0% | |
| TTGCCATCATGGTGTTTATG+AGG | - | chr5.3:33894691-33894710 | MS.gene054760:intron | 40.0% | |
| ! | CCTTTTGTGGTAATCTTTCG+AGG | + | chr5.3:33893703-33893722 | None:intergenic | 40.0% |
| ! | CGAAATGAGTCTTTTCCATG+TGG | - | chr5.3:33897050-33897069 | MS.gene054760:CDS | 40.0% |
| ! | TAGTTTTTCGCTATCGTGGT+AGG | - | chr5.3:33895815-33895834 | MS.gene054760:intron | 40.0% |
| ! | TGTGTGTACTTAAGGCACTA+GGG | - | chr5.3:33896018-33896037 | MS.gene054760:intron | 40.0% |
| !! | GATCATGCTTTTCTGGGAAA+AGG | + | chr5.3:33896770-33896789 | None:intergenic | 40.0% |
| !!! | AGACTAGTTTTTCGCTATCG+TGG | - | chr5.3:33895811-33895830 | MS.gene054760:intron | 40.0% |
| !!! | CTACTGCCAGTACTTTTTTC+CGG | - | chr5.3:33896952-33896971 | MS.gene054760:CDS | 40.0% |
| !!! | TACTGCCAGTACTTTTTTCC+GGG | - | chr5.3:33896953-33896972 | MS.gene054760:CDS | 40.0% |
| AAACTAGGCAAAACCACACC+AGG | - | chr5.3:33896238-33896257 | MS.gene054760:intron | 45.0% | |
| AAATGGTCCACATCATTCCC+TGG | + | chr5.3:33895719-33895738 | None:intergenic | 45.0% | |
| AACTAGGCAAAACCACACCA+GGG | - | chr5.3:33896239-33896258 | MS.gene054760:intron | 45.0% | |
| AAGCAGGTAAGCTAGAAGTG+CGG | + | chr5.3:33893635-33893654 | None:intergenic | 45.0% | |
| AATGGTCCACATCATTCCCT+GGG | + | chr5.3:33895718-33895737 | None:intergenic | 45.0% | |
| AATTCGTGTCCATGTGTAGC+GGG | + | chr5.3:33896858-33896877 | None:intergenic | 45.0% | |
| CTAGTTGAGGGCTGCAAATT+GGG | + | chr5.3:33896830-33896849 | None:intergenic | 45.0% | |
| CTTTGTGATGTGGAGCCATA+TGG | - | chr5.3:33895224-33895243 | MS.gene054760:intron | 45.0% | |
| GATTTCCTATGGAGGCTTCT+AGG | - | chr5.3:33893319-33893338 | MS.gene054760:CDS | 45.0% | |
| GCTCCTGTATGCCAAGTTTA+TGG | - | chr5.3:33893657-33893676 | MS.gene054760:intron | 45.0% | |
| GTCTTCTAACCTTCAAAGGG+TGG | - | chr5.3:33897133-33897152 | MS.gene054760:CDS | 45.0% | |
| GTTAAGCCAGAACTGCATCA+GGG | + | chr5.3:33896538-33896557 | None:intergenic | 45.0% | |
| TACAGAGCAGTTTGCAAGAC+TGG | + | chr5.3:33894280-33894299 | None:intergenic | 45.0% | |
| TCTAGTTGAGGGCTGCAAAT+TGG | + | chr5.3:33896831-33896850 | None:intergenic | 45.0% | |
| TGTGGACTTGGGATTTCCTA+TGG | - | chr5.3:33893308-33893327 | MS.gene054760:CDS | 45.0% | |
| TGTTAAGCCAGAACTGCATC+AGG | + | chr5.3:33896539-33896558 | None:intergenic | 45.0% | |
| TTAAGCCAGAACTGCATCAG+GGG | + | chr5.3:33896537-33896556 | None:intergenic | 45.0% | |
| TTCGCAGAGCTTGTCATCAA+AGG | + | chr5.3:33897020-33897039 | None:intergenic | 45.0% | |
| TTTGCTTCTCCACCCTTTGA+AGG | + | chr5.3:33897145-33897164 | None:intergenic | 45.0% | |
| ! | CGCAGACTTTATGCCTTTTG+TGG | + | chr5.3:33893716-33893735 | None:intergenic | 45.0% |
| ! | GATGTCCCGGAAAAAAGTAC+TGG | + | chr5.3:33896961-33896980 | None:intergenic | 45.0% |
| ! | GTGTGTGTACTTAAGGCACT+AGG | - | chr5.3:33896017-33896036 | MS.gene054760:intron | 45.0% |
| ! | TCGTCAATGGTGTTGAACAG+AGG | - | chr5.3:33893763-33893782 | MS.gene054760:intron | 45.0% |
| !! | AAAGTACTGGCAGTAGCTGA+TGG | + | chr5.3:33896948-33896967 | None:intergenic | 45.0% |
| !! | ATCTCTCAAGTTGGTCCTCA+AGG | - | chr5.3:33895291-33895310 | MS.gene054760:intron | 45.0% |
| !! | CACTTCTAGCTTACCTGCTT+TGG | - | chr5.3:33893635-33893654 | MS.gene054760:intron | 45.0% |
| !! | CTGATGGATTTCCTGCTGTT+TGG | + | chr5.3:33896932-33896951 | None:intergenic | 45.0% |
| !! | TCTCTCAAGTTGGTCCTCAA+GGG | - | chr5.3:33895292-33895311 | MS.gene054760:intron | 45.0% |
| !! | TTCTAGGACTGTTCGTGGTT+CGG | - | chr5.3:33893335-33893354 | MS.gene054760:CDS | 45.0% |
| !! | TTTATATCTAAAAAAATAAA+GGG | + | chr5.3:33896297-33896316 | None:intergenic | 5.0% |
| !!! | TTTTATATCTAAAAAAATAA+AGG | + | chr5.3:33896298-33896317 | None:intergenic | 5.0% |
| ACAGTCCTAGAAGCCTCCAT+AGG | + | chr5.3:33893327-33893346 | None:intergenic | 50.0% | |
| CGTCGAACTCAGTTACCAGA+TGG | + | chr5.3:33894354-33894373 | None:intergenic | 50.0% | |
| CTGACAGAAGAGAGAGAGCA+TGG | + | chr5.3:33896887-33896906 | None:intergenic | 50.0% | |
| CTGGTAACTGAGTTCGACGA+TGG | - | chr5.3:33894355-33894374 | MS.gene054760:intron | 50.0% | |
| GACATCCGCACTCAAGATAG+AGG | - | chr5.3:33896975-33896994 | MS.gene054760:CDS | 50.0% | |
| GGACTTGGGATTTCCTATGG+AGG | - | chr5.3:33893311-33893330 | MS.gene054760:CDS | 50.0% | |
| GTGTGGAACAACGTTCCCAT+CGG | + | chr5.3:33896660-33896679 | None:intergenic | 50.0% | |
| TATCTTGAGTGCGGATGTCC+CGG | + | chr5.3:33896974-33896993 | None:intergenic | 50.0% | |
| TCAGACATCTAGCTGTGAGC+TGG | - | chr5.3:33893359-33893378 | MS.gene054760:CDS | 50.0% | |
| TGTGGAACAACGTTCCCATC+GGG | + | chr5.3:33896659-33896678 | None:intergenic | 50.0% | |
| ! | AGCAGGTAAGCTAGAAGTGC+GGG | + | chr5.3:33893634-33893653 | None:intergenic | 50.0% |
| ! | TAGCGGGCACTTCTAGTTGA+GGG | + | chr5.3:33896842-33896861 | None:intergenic | 50.0% |
| !! | TTTCCTGCTGTTTGGTGCGA+CGG | + | chr5.3:33896924-33896943 | None:intergenic | 50.0% |
| AAGGACCCCTGATGCAGTTC+TGG | - | chr5.3:33896529-33896548 | MS.gene054760:intron | 55.0% | |
| AATCCGTCGCACCAAACAGC+AGG | - | chr5.3:33896918-33896937 | MS.gene054760:CDS | 55.0% | |
| ATGGTAAGCGCAGTTGTCGC+AGG | - | chr5.3:33894374-33894393 | MS.gene054760:intron | 55.0% | |
| GGTCGCCTCTATCTTGAGTG+CGG | + | chr5.3:33896983-33897002 | None:intergenic | 55.0% | |
| TGGCATACAGGAGCCAAAGC+AGG | + | chr5.3:33893651-33893670 | None:intergenic | 55.0% | |
| TGTGGTCCCAGGGAATGATG+TGG | - | chr5.3:33895709-33895728 | MS.gene054760:intron | 55.0% | |
| ! | GCTAGAAGTGCGGGATCTCT+TGG | + | chr5.3:33893625-33893644 | None:intergenic | 55.0% |
| !! | CTAGAAGTGCCCGCTACACA+TGG | - | chr5.3:33896846-33896865 | MS.gene054760:CDS | 55.0% |
| !! | GAGGCTTCTAGGACTGTTCG+TGG | - | chr5.3:33893330-33893349 | MS.gene054760:CDS | 55.0% |
| !! | GGTTTTGTCAGCAGTGCAGC+AGG | - | chr5.3:33893784-33893803 | MS.gene054760:intron | 55.0% |
| !! | GTAGCGGGCACTTCTAGTTG+AGG | + | chr5.3:33896843-33896862 | None:intergenic | 55.0% |
| AGTTGTCGCAGGCGTCTAGC+TGG | - | chr5.3:33894385-33894404 | MS.gene054760:intron | 60.0% | |
| !! | CTGGACACAATGAGCGCCGA+AGG | - | chr5.3:33894404-33894423 | MS.gene054760:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 33893126 | 33897220 | 33893126 | ID=MS.gene054760 |
| chr5.3 | mRNA | 33893126 | 33897220 | 33893126 | ID=MS.gene054760.t1;Parent=MS.gene054760 |
| chr5.3 | exon | 33896541 | 33897220 | 33896541 | ID=MS.gene054760.t1.exon1;Parent=MS.gene054760.t1 |
| chr5.3 | CDS | 33896541 | 33897220 | 33896541 | ID=cds.MS.gene054760.t1;Parent=MS.gene054760.t1 |
| chr5.3 | exon | 33895862 | 33895998 | 33895862 | ID=MS.gene054760.t1.exon2;Parent=MS.gene054760.t1 |
| chr5.3 | CDS | 33895862 | 33895998 | 33895862 | ID=cds.MS.gene054760.t1;Parent=MS.gene054760.t1 |
| chr5.3 | exon | 33893126 | 33893622 | 33893126 | ID=MS.gene054760.t1.exon3;Parent=MS.gene054760.t1 |
| chr5.3 | CDS | 33893126 | 33893622 | 33893126 | ID=cds.MS.gene054760.t1;Parent=MS.gene054760.t1 |
| Gene Sequence |
| Protein sequence |
