AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05499

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05499.t1 MTR_6g085170 98.603 358 5 0 1 358 1 358 0.0 739
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05499.t1 AT1G43860 62.264 371 126 5 1 358 1 370 6.35e-167 471
MS.gene05499.t1 AT1G43860 57.101 345 125 6 27 358 1 335 9.83e-136 390

Find 82 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGACAATGTCTCGTTCTT+TGG 0.242477 6.2:+84185587 None:intergenic
GCACAGATTCAGAAGTTCTT+TGG 0.262575 6.2:-84190445 None:intergenic
ACAGGCTTTGGAGTTGATTC+AGG 0.278478 6.2:+84188988 MS.gene05499:intron
CACAGATTCAGAAGTTCTTT+GGG 0.286481 6.2:-84190444 None:intergenic
TCATTCCAGTATTTGTTTAG+AGG 0.301804 6.2:+84185920 MS.gene05499:CDS
AGGTGTTCTTGCTAAGTCTA+AGG 0.321336 6.2:+84185869 MS.gene05499:CDS
TGCTTCTTGGAGGTGCTGTT+TGG 0.331667 6.2:-84188876 None:intergenic
CAATGCTGTCTAGTCAGTTC+AGG 0.331986 6.2:+84188745 MS.gene05499:CDS
ACAAACCTCTAAACAAATAC+TGG 0.335979 6.2:-84185925 None:intergenic
ACCCTAACACCGTTCTTTCA+TGG 0.342417 6.2:+84185694 MS.gene05499:CDS
CGCCATGAAAGAACGGTGTT+AGG 0.353355 6.2:-84185696 None:intergenic
GGAGGAAGTACCTATCCTTT+TGG 0.369437 6.2:+84189072 MS.gene05499:CDS
TTTAAAGAAAGGGGAACTTC+AGG 0.373529 6.2:+84188701 MS.gene05499:CDS
CCCACTCTCTTTATGTGGAT+GGG 0.377962 6.2:+84190372 MS.gene05499:CDS
GCCCACTCTCTTTATGTGGA+TGG 0.378552 6.2:+84190371 MS.gene05499:CDS
AGAAGAGTGCACAGCAGATA+TGG 0.383434 6.2:+84190667 MS.gene05499:CDS
TGAATCAAAATCTGATTTGA+AGG 0.400506 6.2:+84190697 MS.gene05499:CDS
AGACTTAGCAAGAACACCTT+TGG 0.400926 6.2:-84185865 None:intergenic
TGGACAAGATACCTGCTTCT+TGG 0.403568 6.2:-84188889 None:intergenic
AAAGGGGAACTTCAGGTTGC+TGG 0.405808 6.2:+84188708 MS.gene05499:CDS
ACCGTTCTTTCATGGCGTTC+CGG 0.423741 6.2:+84185702 MS.gene05499:CDS
AGGATAGGTACTTCCTCCTC+AGG 0.427749 6.2:-84189067 None:intergenic
TGTTGTCCCTCAGTAGGCTT+AGG 0.430168 6.2:-84190512 None:intergenic
TTGAAGATGCTAAGTTGTAC+AGG 0.433138 6.2:+84190573 MS.gene05499:CDS
TGTCCCTTCTTTAGAAATAA+CGG 0.436135 6.2:-84189119 None:intergenic
TCAATCATGCTGATAGTGTA+AGG 0.442974 6.2:-84188819 None:intergenic
CAAAAGCAAACAATTTCGTC+TGG 0.443371 6.2:+84190488 MS.gene05499:CDS
GTTCTTTGGGGCAATGGTGC+AGG 0.445854 6.2:-84190431 None:intergenic
AAGGATTTGAATGCTGCGTT+TGG 0.446900 6.2:+84185888 MS.gene05499:CDS
TCTTGCCCACTCTCTTTATG+TGG 0.447874 6.2:+84190367 MS.gene05499:CDS
GCAACCGTTATTTCTAAAGA+AGG 0.452079 6.2:+84189115 MS.gene05499:CDS
TCAGAAGTTCTTTGGGGCAA+TGG 0.457008 6.2:-84190437 None:intergenic
CCACTCTCTTTATGTGGATG+GGG 0.478255 6.2:+84190373 MS.gene05499:CDS
GTGCACTCTTCTTCAGATAG+TGG 0.490526 6.2:-84190656 None:intergenic
TTTGGTTGTTGTCCCTCAGT+AGG 0.497330 6.2:-84190518 None:intergenic
GGAGGTGCTGTTTGGATCAA+CGG 0.498600 6.2:-84188868 None:intergenic
AGTGTAAGGGCGCTTAGTCT+CGG 0.500797 6.2:-84188805 None:intergenic
GCAGCAGCACGTACCCTCAA+TGG 0.503565 6.2:-84189043 None:intergenic
TGAAGTTTATCATTCAGCTC+AGG 0.508925 6.2:-84190467 None:intergenic
ATTGGAGCCTGGTCTGTACA+AGG 0.509232 6.2:+84190298 MS.gene05499:CDS
GCCATGAAAGAACGGTGTTA+GGG 0.509375 6.2:-84185695 None:intergenic
TGTTTGGATCAACGGCGAAA+TGG 0.514596 6.2:-84188860 None:intergenic
GTGTAAGGGCGCTTAGTCTC+GGG 0.522577 6.2:-84188804 None:intergenic
ACAAGATACCTGCTTCTTGG+AGG 0.523348 6.2:-84188886 None:intergenic
CGTTCTTTGGTTCAACCAGT+AGG 0.523435 6.2:+84185600 MS.gene05499:CDS
ACGTGCTGCTGCCCCTGAGG+AGG 0.534727 6.2:+84189054 MS.gene05499:CDS
CTATAAAACGGTGTCCATTG+AGG 0.535043 6.2:+84189029 MS.gene05499:CDS
AAACAGCACCTCCAAGAAGC+AGG 0.539561 6.2:+84188878 MS.gene05499:CDS
TATAAAACGGTGTCCATTGA+GGG 0.542061 6.2:+84189030 MS.gene05499:CDS
TGAAGTGTTGCAGTCACATA+CGG 0.542659 6.2:+84185827 MS.gene05499:CDS
AGAAGCACTACCCTATAAAA+CGG 0.553845 6.2:+84189017 MS.gene05499:CDS
AAAAGTCTTGTGCATTACAA+TGG 0.555238 6.2:-84188778 None:intergenic
AATGCTGTCTAGTCAGTTCA+GGG 0.557997 6.2:+84188746 MS.gene05499:CDS
GCTTGTGCCACTCACTCTTG+TGG 0.558268 6.2:-84190601 None:intergenic
CAACCGTTATTTCTAAAGAA+GGG 0.568663 6.2:+84189116 MS.gene05499:CDS
GCATGATTGAACGCCTCATG+AGG 0.570502 6.2:+84188832 MS.gene05499:CDS
GGAAAAGCTGAGCGAGTGGA+AGG 0.571341 6.2:+84189093 MS.gene05499:CDS
CCCCATCCACATAAAGAGAG+TGG 0.574291 6.2:-84190373 None:intergenic
GGATAGGTACTTCCTCCTCA+GGG 0.584943 6.2:-84189066 None:intergenic
TTCAGGTTGCTGGCAAAGAG+AGG 0.590857 6.2:+84188718 MS.gene05499:CDS
GCCGGAACGCCATGAAAGAA+CGG 0.596078 6.2:-84185703 None:intergenic
GTTTATACGAATGTTTCCAA+AGG 0.596362 6.2:+84185849 MS.gene05499:CDS
AGTCTTGTGCATTACAATGG+TGG 0.608471 6.2:-84188775 None:intergenic
CCCATCCACATAAAGAGAGT+GGG 0.610890 6.2:-84190372 None:intergenic
TCAGGTTGCTGGCAAAGAGA+GGG 0.612205 6.2:+84188719 MS.gene05499:CDS
CAATCATGCTGATAGTGTAA+GGG 0.615053 6.2:-84188818 None:intergenic
TGAAGATGCTAAGTTGTACA+GGG 0.615157 6.2:+84190574 MS.gene05499:CDS
TTCGTTATGAATAAGATGCA+CGG 0.618498 6.2:+84190332 MS.gene05499:CDS
TGACAATCCTTGTACAGACC+AGG 0.622830 6.2:-84190305 None:intergenic
CACTCTTCTTCAGATAGTGG+AGG 0.623792 6.2:-84190653 None:intergenic
GGTACGTGCTGCTGCCCCTG+AGG 0.629720 6.2:+84189051 MS.gene05499:CDS
CGAAATGGATATCCCTCATG+AGG 0.631953 6.2:-84188845 None:intergenic
GGGAACACCACAAGAGTGAG+TGG 0.646994 6.2:+84190594 MS.gene05499:CDS
TGTGGATGGGGATACTCATG+TGG 0.649096 6.2:+84190385 MS.gene05499:CDS
ACAGATTCAGAAGTTCTTTG+GGG 0.650481 6.2:-84190443 None:intergenic
CATGATTGAACGCCTCATGA+GGG 0.655277 6.2:+84188833 MS.gene05499:CDS
GTCTGGACCTAAGCCTACTG+AGG 0.658281 6.2:+84190505 MS.gene05499:CDS
TCTGGACCTAAGCCTACTGA+GGG 0.681737 6.2:+84190506 MS.gene05499:CDS
ACAATATGAAGCGTAAAACG+AGG 0.684743 6.2:+84190624 MS.gene05499:CDS
GTTGTTCGTCTCAAGAAACA+CGG 0.697669 6.2:+84185648 MS.gene05499:CDS
GATAGGTACTTCCTCCTCAG+GGG 0.704780 6.2:-84189065 None:intergenic
TGTGGATTACAATGATCACG+AGG 0.749511 6.2:+84190403 MS.gene05499:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATCACAAAATATTA+GGG - chr6.2:84185747-84185766 None:intergenic 10.0%
!! ATTATTTATAATTAACAACA+GGG - chr6.2:84190159-84190178 None:intergenic 10.0%
!! TAATTTAAGAAAATGATAAA+TGG + chr6.2:84186481-84186500 MS.gene05499:intron 10.0%
!! AAGTTATAAATTGGTTATAA+GGG - chr6.2:84188519-84188538 None:intergenic 15.0%
!! CATAATAATCACAAAATATT+AGG - chr6.2:84185748-84185767 None:intergenic 15.0%
!! GATTATTTATAATTAACAAC+AGG - chr6.2:84190160-84190179 None:intergenic 15.0%
!!! ATTGTGATTTTTTTTTTTGT+TGG + chr6.2:84187967-84187986 MS.gene05499:intron 15.0%
!!! TTCTTTTTTGATGAATAAAA+AGG - chr6.2:84187941-84187960 None:intergenic 15.0%
!!! TTGACTTTTTTAATAAGTTT+AGG + chr6.2:84186371-84186390 MS.gene05499:intron 15.0%
!! AAAAATAAACTGGAAATACA+AGG + chr6.2:84189568-84189587 MS.gene05499:intron 20.0%
!! AACAGTAATAACATTTGAAA+TGG - chr6.2:84190133-84190152 None:intergenic 20.0%
!! AAGCATAAATTGCATAAATA+AGG - chr6.2:84186829-84186848 None:intergenic 20.0%
!! AATTGTTCTGATTTCTAATT+TGG + chr6.2:84190261-84190280 MS.gene05499:intron 20.0%
!! ACTAAATAATAATCTAATCC+TGG - chr6.2:84189486-84189505 None:intergenic 20.0%
!! AGCATAAATTGCATAAATAA+GGG - chr6.2:84186828-84186847 None:intergenic 20.0%
!! ATTAGTTATTATGCATAAAC+TGG - chr6.2:84188621-84188640 None:intergenic 20.0%
!! CAAGTTATAAATTGGTTATA+AGG - chr6.2:84188520-84188539 None:intergenic 20.0%
!! TCATGAAACATTTATAAACA+TGG - chr6.2:84190105-84190124 None:intergenic 20.0%
!! TTCTTAAATTATTAACGTGT+TGG - chr6.2:84186003-84186022 None:intergenic 20.0%
!!! AAAAAGTTGAAAAAAGTGTA+TGG - chr6.2:84188186-84188205 None:intergenic 20.0%
!!! AAGCTATTTTTCTTCAAAAA+AGG - chr6.2:84188153-84188172 None:intergenic 20.0%
!!! AATAACTAATTTTGAACTGT+TGG + chr6.2:84188631-84188650 MS.gene05499:intron 20.0%
!!! ACAAAATTTTCAATAAGCTT+AGG + chr6.2:84186612-84186631 MS.gene05499:intron 20.0%
!!! AGGTTTTTAGTTTCTATTTT+GGG + chr6.2:84187899-84187918 MS.gene05499:intron 20.0%
!!! AGTTAATTTGATGGATTAAT+CGG + chr6.2:84185778-84185797 MS.gene05499:intron 20.0%
!!! ATAGAATTATTTAGAATGAC+TGG - chr6.2:84188912-84188931 None:intergenic 20.0%
!!! GATTAATTGAGTTAATTTGA+TGG + chr6.2:84185769-84185788 MS.gene05499:intron 20.0%
!!! GTTTTAGGAAATGAATTATT+GGG + chr6.2:84186634-84186653 MS.gene05499:intron 20.0%
!!! TAATTCATTTTCTAAGCTTA+TGG - chr6.2:84187318-84187337 None:intergenic 20.0%
!!! TTTTAATAAGTTTAGGTGTT+AGG + chr6.2:84186378-84186397 MS.gene05499:intron 20.0%
!!! TTTTTTGTAACAAGTTATTC+AGG + chr6.2:84188201-84188220 MS.gene05499:intron 20.0%
! ACAAACAAACATTCAAAAGA+CGG - chr6.2:84189456-84189475 None:intergenic 25.0%
! ATAACCCATAAAAAAGCTAA+TGG + chr6.2:84190074-84190093 MS.gene05499:intron 25.0%
! GATTATGAAAGTTGTATTAC+AGG + chr6.2:84188970-84188989 MS.gene05499:intron 25.0%
! TAACCCATAAAAAAGCTAAT+GGG + chr6.2:84190075-84190094 MS.gene05499:intron 25.0%
! TATATCTGCATTTACGTATA+GGG + chr6.2:84190201-84190220 MS.gene05499:intron 25.0%
! TCATAAACCCTCAAATAATA+AGG - chr6.2:84187812-84187831 None:intergenic 25.0%
! TGATGAATAAAAAGGAGTTA+GGG - chr6.2:84187933-84187952 None:intergenic 25.0%
! TGGCGTATGATTAAATTATT+TGG + chr6.2:84187215-84187234 MS.gene05499:intron 25.0%
! TTATTTGGATTTATCTACTG+AGG + chr6.2:84187230-84187249 MS.gene05499:intron 25.0%
! TTGATGAATAAAAAGGAGTT+AGG - chr6.2:84187934-84187953 None:intergenic 25.0%
! TTTATGCAATTTATGCTTAG+AGG + chr6.2:84186831-84186850 MS.gene05499:intron 25.0%
! TTTGTCTGTTGGATAAAATT+TGG - chr6.2:84189427-84189446 None:intergenic 25.0%
!! AATACAAGGTGTATTTTATC+TGG + chr6.2:84189582-84189601 MS.gene05499:intron 25.0%
!! ATAACCAATTTATAACTTGC+AGG + chr6.2:84188521-84188540 MS.gene05499:intron 25.0%
!! ATTTTATCCAACACAAAAAC+AGG + chr6.2:84189340-84189359 MS.gene05499:intron 25.0%
!! ATTTTATTCTCGGTAACATT+GGG + chr6.2:84189197-84189216 MS.gene05499:intron 25.0%
!! TGAATCAAAATCTGATTTGA+AGG + chr6.2:84190697-84190716 MS.gene05499:CDS 25.0%
!! TTTCAATAAGCTTAGGTTTT+AGG + chr6.2:84186619-84186638 MS.gene05499:intron 25.0%
!!! AGAGACTTTTTAATTAGCTT+AGG + chr6.2:84187042-84187061 MS.gene05499:intron 25.0%
!!! CTGTTGTTTTTGATTTTTCT+TGG + chr6.2:84189705-84189724 MS.gene05499:intron 25.0%
!!! GAGGTTTTTAGTTTCTATTT+TGG + chr6.2:84187898-84187917 MS.gene05499:intron 25.0%
!!! GGTTTTAGGAAATGAATTAT+TGG + chr6.2:84186633-84186652 MS.gene05499:intron 25.0%
!!! GGTTTTTAGTTTCTATTTTG+GGG + chr6.2:84187900-84187919 MS.gene05499:intron 25.0%
!!! TGTTGCAGATTTTAAAGAAA+GGG + chr6.2:84188691-84188710 MS.gene05499:intron 25.0%
AACACCACATACAACTTATA+TGG + chr6.2:84188234-84188253 MS.gene05499:intron 30.0%
AATTATATATGCCATTGTCG+TGG + chr6.2:84186041-84186060 MS.gene05499:intron 30.0%
ACAAACCTCTAAACAAATAC+TGG - chr6.2:84185928-84185947 None:intergenic 30.0%
ACTATCACAATCAACTAGTA+AGG - chr6.2:84187865-84187884 None:intergenic 30.0%
ACTTCCATATAAGTTGTATG+TGG - chr6.2:84188241-84188260 None:intergenic 30.0%
AGCTCAACCTTATTATTTGA+GGG + chr6.2:84187802-84187821 MS.gene05499:intron 30.0%
AGTTCCTGCAAGTTATAAAT+TGG - chr6.2:84188528-84188547 None:intergenic 30.0%
ATTCAGTTAGCATTATCACA+TGG + chr6.2:84187587-84187606 MS.gene05499:intron 30.0%
CAATGTTACCGAGAATAAAA+TGG - chr6.2:84189198-84189217 None:intergenic 30.0%
GATATACAAGACACAACTTA+TGG - chr6.2:84190187-84190206 None:intergenic 30.0%
GATGAATAAAAAGGAGTTAG+GGG - chr6.2:84187932-84187951 None:intergenic 30.0%
GCAGAATTCAGATTCATTTA+TGG + chr6.2:84190019-84190038 MS.gene05499:intron 30.0%
GCTCATTGGTAAAAATAAAC+TGG + chr6.2:84189558-84189577 MS.gene05499:intron 30.0%
GTATATCTGCATTTACGTAT+AGG + chr6.2:84190200-84190219 MS.gene05499:intron 30.0%
GTTTATACGAATGTTTCCAA+AGG + chr6.2:84185849-84185868 MS.gene05499:CDS 30.0%
TAACATTGAATCGATCAAGT+AGG - chr6.2:84186866-84186885 None:intergenic 30.0%
TAATTCATTTCCTGAGCTTA+TGG - chr6.2:84187417-84187436 None:intergenic 30.0%
TACAGAAATAATGCCAAAAG+TGG + chr6.2:84187538-84187557 MS.gene05499:intron 30.0%
TAGCTCAACCTTATTATTTG+AGG + chr6.2:84187801-84187820 MS.gene05499:intron 30.0%
TCAACATTTGTGATAGTTAC+AGG + chr6.2:84189371-84189390 MS.gene05499:intron 30.0%
TCATTCCAGTATTTGTTTAG+AGG + chr6.2:84185920-84185939 MS.gene05499:CDS 30.0%
TGTTTGTTTGTGATAATTCC+AGG + chr6.2:84189465-84189484 MS.gene05499:intron 30.0%
TTATATCATAAACCTACCCA+TGG - chr6.2:84187694-84187713 None:intergenic 30.0%
TTCGTTATGAATAAGATGCA+CGG + chr6.2:84190332-84190351 MS.gene05499:CDS 30.0%
TTGATTCTGCTAAAATTTCG+AGG + chr6.2:84190236-84190255 MS.gene05499:intron 30.0%
TTTACCTGGTTATTGTATAC+AGG + chr6.2:84189524-84189543 MS.gene05499:intron 30.0%
TTTGTTAAGCAGATTGAATG+TGG - chr6.2:84189979-84189998 None:intergenic 30.0%
! AAAAGTCTTGTGCATTACAA+TGG - chr6.2:84188781-84188800 None:intergenic 30.0%
! AGCATGGAAGAACTTTAAAA+TGG - chr6.2:84187738-84187757 None:intergenic 30.0%
! CATTTTATTCTCGGTAACAT+TGG + chr6.2:84189196-84189215 MS.gene05499:intron 30.0%
! GATTCATTTATGGACTTTTC+TGG + chr6.2:84190029-84190048 MS.gene05499:intron 30.0%
! TCATGGTTCCATTTTATTCT+CGG + chr6.2:84189187-84189206 MS.gene05499:intron 30.0%
! TGACTAGCAATTTCTTCTTT+TGG - chr6.2:84186698-84186717 None:intergenic 30.0%
! TGTCCCTTCTTTAGAAATAA+CGG - chr6.2:84189122-84189141 None:intergenic 30.0%
! TTTTATCCAACAGACAAAAC+AGG + chr6.2:84189429-84189448 MS.gene05499:intron 30.0%
!! AGAAGCATTGTTATAGTTGA+CGG + chr6.2:84189231-84189250 MS.gene05499:intron 30.0%
!! ATCAAAAGTGTTGGTACTAT+AGG + chr6.2:84186574-84186593 MS.gene05499:intron 30.0%
!! CAACCGTTATTTCTAAAGAA+GGG + chr6.2:84189116-84189135 MS.gene05499:CDS 30.0%
!! CATGGAAGAACTTTAAAATG+GGG - chr6.2:84187736-84187755 None:intergenic 30.0%
!! CTGTTGCAGATTTTAAAGAA+AGG + chr6.2:84188690-84188709 MS.gene05499:intron 30.0%
!! GCATGGAAGAACTTTAAAAT+GGG - chr6.2:84187737-84187756 None:intergenic 30.0%
!! GTATTTTATCTGGTTTCTCA+GGG + chr6.2:84189592-84189611 MS.gene05499:intron 30.0%
!! GTTGCAGATTTTAAAGAAAG+GGG + chr6.2:84188692-84188711 MS.gene05499:intron 30.0%
!! TAATTTGATGGATTAATCGG+TGG + chr6.2:84185781-84185800 MS.gene05499:intron 30.0%
!! TAATTTTGAACTGTTGGTTG+AGG + chr6.2:84188637-84188656 MS.gene05499:intron 30.0%
!! TCAAAAGTGTTGGTACTATA+GGG + chr6.2:84186575-84186594 MS.gene05499:intron 30.0%
!! TGTATTTTATCTGGTTTCTC+AGG + chr6.2:84189591-84189610 MS.gene05499:intron 30.0%
!!! GTTTTTGATTTTTCTTGGCA+TGG + chr6.2:84189710-84189729 MS.gene05499:intron 30.0%
AAATAATGCCAAAAGTGGCT+GGG + chr6.2:84187543-84187562 MS.gene05499:intron 35.0%
AACAGCGGCAAATGAATATT+TGG - chr6.2:84189910-84189929 None:intergenic 35.0%
AATGAATCTGAATTCTGCAC+AGG - chr6.2:84190017-84190036 None:intergenic 35.0%
ACAAGACACAACTTATGGAA+AGG - chr6.2:84190182-84190201 None:intergenic 35.0%
ACAATATGAAGCGTAAAACG+AGG + chr6.2:84190624-84190643 MS.gene05499:CDS 35.0%
ACAGATTCAGAAGTTCTTTG+GGG - chr6.2:84190446-84190465 None:intergenic 35.0%
ACGAAACACTGATACAAACA+CGG + chr6.2:84186186-84186205 MS.gene05499:intron 35.0%
AGCTATAATCAGAGACAATG+TGG - chr6.2:84188450-84188469 None:intergenic 35.0%
ATCAGACTTTGTCCAATAGT+TGG - chr6.2:84187618-84187637 None:intergenic 35.0%
CAAAAGCAAACAATTTCGTC+TGG + chr6.2:84190488-84190507 MS.gene05499:CDS 35.0%
CAAACCTGTATACAATAACC+AGG - chr6.2:84189531-84189550 None:intergenic 35.0%
CACAGATTCAGAAGTTCTTT+GGG - chr6.2:84190447-84190466 None:intergenic 35.0%
CTGATTTCTAATTTGGTTGC+AGG + chr6.2:84190268-84190287 MS.gene05499:intron 35.0%
GAAAGTTGTATTACAGGCTT+TGG + chr6.2:84188976-84188995 MS.gene05499:intron 35.0%
GATAGTACTCTCTTTCTAAG+AGG + chr6.2:84187879-84187898 MS.gene05499:intron 35.0%
GGTGTTTACAGAGAAGTTAA+AGG - chr6.2:84187168-84187187 None:intergenic 35.0%
GTTTATTCGCAGTTGACATT+AGG + chr6.2:84187998-84188017 MS.gene05499:intron 35.0%
GTTTGGGTAGAATTTGATCA+TGG + chr6.2:84189640-84189659 MS.gene05499:intron 35.0%
TAAAATGGGGACTTAAGTCA+CGG - chr6.2:84187723-84187742 None:intergenic 35.0%
TACAAACACGGAAACCAAAA+CGG + chr6.2:84186198-84186217 MS.gene05499:intron 35.0%
TACAGAAATCATGCCAAAAG+TGG + chr6.2:84187340-84187359 MS.gene05499:intron 35.0%
TATAAAACGGTGTCCATTGA+GGG + chr6.2:84189030-84189049 MS.gene05499:CDS 35.0%
TATCACATGTTCATAAGCTC+AGG + chr6.2:84187503-84187522 MS.gene05499:intron 35.0%
TGAAGATGCTAAGTTGTACA+GGG + chr6.2:84190574-84190593 MS.gene05499:CDS 35.0%
TGAAGTTTATCATTCAGCTC+AGG - chr6.2:84190470-84190489 None:intergenic 35.0%
TGCAATTTATGCTTAGAGGT+TGG + chr6.2:84186835-84186854 MS.gene05499:intron 35.0%
TGTCAAGTTTCAGTGTTTCA+TGG - chr6.2:84186902-84186921 None:intergenic 35.0%
TTGAAGATGCTAAGTTGTAC+AGG + chr6.2:84190573-84190592 MS.gene05499:CDS 35.0%
TTTAAAGAAAGGGGAACTTC+AGG + chr6.2:84188701-84188720 MS.gene05499:CDS 35.0%
TTTCGAAATTACTTACACGC+CGG - chr6.2:84185724-84185743 None:intergenic 35.0%
! CAATCATGCTGATAGTGTAA+GGG - chr6.2:84188821-84188840 None:intergenic 35.0%
! CAGGTGCAATAGTTTTTCTT+GGG + chr6.2:84189682-84189701 MS.gene05499:intron 35.0%
! CATGCATTTTCTGTAAGTTG+TGG + chr6.2:84189953-84189972 MS.gene05499:intron 35.0%
! TCAATCATGCTGATAGTGTA+AGG - chr6.2:84188822-84188841 None:intergenic 35.0%
! TCAATGGACACCGTTTTATA+GGG - chr6.2:84189030-84189049 None:intergenic 35.0%
! TCAGGTGCAATAGTTTTTCT+TGG + chr6.2:84189681-84189700 MS.gene05499:intron 35.0%
! TGTGTTGCTCAGTTATTTCA+TGG + chr6.2:84189170-84189189 MS.gene05499:intron 35.0%
! TTCTTTTATCGCAGTTTACC+TGG + chr6.2:84189510-84189529 MS.gene05499:intron 35.0%
! TTGGTTGCAGGTTTTTGAAT+TGG + chr6.2:84190280-84190299 MS.gene05499:intron 35.0%
!! AGAAGCACTACCCTATAAAA+CGG + chr6.2:84189017-84189036 MS.gene05499:CDS 35.0%
!! GCAACCGTTATTTCTAAAGA+AGG + chr6.2:84189115-84189134 MS.gene05499:CDS 35.0%
!! GGGTTATTTTGTTGAGATGA+GGG - chr6.2:84190061-84190080 None:intergenic 35.0%
!! GGTTATTTTGTTGAGATGAG+GGG - chr6.2:84190060-84190079 None:intergenic 35.0%
!! TGGGTTATTTTGTTGAGATG+AGG - chr6.2:84190062-84190081 None:intergenic 35.0%
!!! AACATGACCTGTTTTTGTGT+TGG - chr6.2:84189350-84189369 None:intergenic 35.0%
!!! ACCTCCCATTAGCTTTTTTA+TGG - chr6.2:84190082-84190101 None:intergenic 35.0%
!!! CCTCCCATTAGCTTTTTTAT+GGG - chr6.2:84190081-84190100 None:intergenic 35.0%
!!! TAGTTTTGATGCCTTGTACT+TGG + chr6.2:84189817-84189836 MS.gene05499:intron 35.0%
AAAGTTCTTCCATGCTCTTG+AGG + chr6.2:84187742-84187761 MS.gene05499:intron 40.0%
AAGGATTTGAATGCTGCGTT+TGG + chr6.2:84185888-84185907 MS.gene05499:CDS 40.0%
AATCACATGTGTCAATGTCG+TGG + chr6.2:84186959-84186978 MS.gene05499:intron 40.0%
AATGCTGTCTAGTCAGTTCA+GGG + chr6.2:84188746-84188765 MS.gene05499:CDS 40.0%
ACAAACACGGAAACCAAAAC+GGG + chr6.2:84186199-84186218 MS.gene05499:intron 40.0%
ACACTCACTTAGGGCATATT+TGG - chr6.2:84188366-84188385 None:intergenic 40.0%
AGACTTAGCAAGAACACCTT+TGG - chr6.2:84185868-84185887 None:intergenic 40.0%
AGGTGTTCTTGCTAAGTCTA+AGG + chr6.2:84185869-84185888 MS.gene05499:CDS 40.0%
AGGTTTGAGAAGTTGCTCAT+TGG + chr6.2:84189544-84189563 MS.gene05499:intron 40.0%
ATCAACTAGTAAGGCTAGGT+AGG - chr6.2:84187856-84187875 None:intergenic 40.0%
CACAATCAACTAGTAAGGCT+AGG - chr6.2:84187860-84187879 None:intergenic 40.0%
CAGAAATGATCAGCTAACAG+CGG - chr6.2:84189925-84189944 None:intergenic 40.0%
CCAACTAAAACAAGGAAACC+AGG - chr6.2:84189777-84189796 None:intergenic 40.0%
CCCATAAAAAAGCTAATGGG+AGG + chr6.2:84190078-84190097 MS.gene05499:intron 40.0%
CTATAAAACGGTGTCCATTG+AGG + chr6.2:84189029-84189048 MS.gene05499:CDS 40.0%
GAAATAATGCCAAAAGTGGC+TGG + chr6.2:84187542-84187561 MS.gene05499:intron 40.0%
GACACTAATATCCACGACAA+TGG - chr6.2:84186055-84186074 None:intergenic 40.0%
GCACAGATTCAGAAGTTCTT+TGG - chr6.2:84190448-84190467 None:intergenic 40.0%
GCGATCAACTTTATTCAGCA+AGG + chr6.2:84187647-84187666 MS.gene05499:intron 40.0%
GGTAGAATTTGATCATGGCA+GGG + chr6.2:84189645-84189664 MS.gene05499:intron 40.0%
GTAGAATTTGATCATGGCAG+GGG + chr6.2:84189646-84189665 MS.gene05499:intron 40.0%
GTTCCAAACACACTCACTTA+GGG - chr6.2:84188375-84188394 None:intergenic 40.0%
GTTGTTCGTCTCAAGAAACA+CGG + chr6.2:84185648-84185667 MS.gene05499:CDS 40.0%
TAAACACCTCTTAAGCACTC+AGG + chr6.2:84187180-84187199 MS.gene05499:intron 40.0%
TAAGCACTCAGGCTTAGTTT+GGG + chr6.2:84187191-84187210 MS.gene05499:intron 40.0%
TAGCAGAGCCAACTAAAACA+AGG - chr6.2:84189785-84189804 None:intergenic 40.0%
TATCACATGTCCATAAGCTC+AGG + chr6.2:84187404-84187423 MS.gene05499:intron 40.0%
TCAACTAGTAAGGCTAGGTA+GGG - chr6.2:84187855-84187874 None:intergenic 40.0%
TGTCGAACATTGACATGTGT+AGG + chr6.2:84186533-84186552 MS.gene05499:intron 40.0%
TGTTCCAAACACACTCACTT+AGG - chr6.2:84188376-84188395 None:intergenic 40.0%
TGTTGGACACTAACATGTGT+GGG + chr6.2:84186288-84186307 MS.gene05499:intron 40.0%
TTAAGCACTCAGGCTTAGTT+TGG + chr6.2:84187190-84187209 MS.gene05499:intron 40.0%
! ACAACTTGCTTCCAAGTACA+AGG - chr6.2:84189831-84189850 None:intergenic 40.0%
! ACCTTTTCGATCAGTAGTGT+CGG + chr6.2:84186106-84186125 MS.gene05499:intron 40.0%
! AGTCTTGTGCATTACAATGG+TGG - chr6.2:84188778-84188797 None:intergenic 40.0%
! ATTGGTTATAAGGGTGTGCT+TGG - chr6.2:84188510-84188529 None:intergenic 40.0%
! CACATGGCTTTTCCAACTAT+TGG + chr6.2:84187603-84187622 MS.gene05499:intron 40.0%
! CTCAATGGACACCGTTTTAT+AGG - chr6.2:84189031-84189050 None:intergenic 40.0%
! CTCAGCTTTTCCAAAAGGAT+AGG - chr6.2:84189085-84189104 None:intergenic 40.0%
! GAATCAAGTTGCGGATTCAT+TGG + chr6.2:84187766-84187785 MS.gene05499:intron 40.0%
! GTACCAACACTTTTGATCGA+AGG - chr6.2:84186571-84186590 None:intergenic 40.0%
! TGTGGATTACAATGATCACG+AGG + chr6.2:84190403-84190422 MS.gene05499:CDS 40.0%
! TTGATTTTTCTTGGCATGGC+AGG + chr6.2:84189714-84189733 MS.gene05499:intron 40.0%
! TTGGTTATAAGGGTGTGCTT+GGG - chr6.2:84188509-84188528 None:intergenic 40.0%
!! GCTTATAACTCAGCCACTTT+TGG - chr6.2:84187455-84187474 None:intergenic 40.0%
!! GTTAATCGCTTTTGACCTAC+TGG - chr6.2:84185618-84185637 None:intergenic 40.0%
!! TGAAGTGTTGCAGTCACATA+CGG + chr6.2:84185827-84185846 MS.gene05499:CDS 40.0%
!!! AGGGTTGTTTCTTGTCCTTT+TGG + chr6.2:84189611-84189630 MS.gene05499:intron 40.0%
!!! CCTGGTTTCCTTGTTTTAGT+TGG + chr6.2:84189774-84189793 MS.gene05499:intron 40.0%
!!! GGGTTGTTTCTTGTCCTTTT+GGG + chr6.2:84189612-84189631 MS.gene05499:intron 40.0%
!!! GTGTTGCACTTGTTTTGCTT+TGG - chr6.2:84190539-84190558 None:intergenic 40.0%
!!! TCGGTGGTTTTGTAGTGAAA+AGG + chr6.2:84185797-84185816 MS.gene05499:intron 40.0%
AAATGCAGCCTGAGTGCTTA+AGG - chr6.2:84188044-84188063 None:intergenic 45.0%
ACAAGATACCTGCTTCTTGG+AGG - chr6.2:84188889-84188908 None:intergenic 45.0%
ACACCAGACATGCCTTCAAT+CGG + chr6.2:84186311-84186330 MS.gene05499:intron 45.0%
ACCCTAACACCGTTCTTTCA+TGG + chr6.2:84185694-84185713 MS.gene05499:CDS 45.0%
ACCGACACTACTGATCGAAA+AGG - chr6.2:84186110-84186129 None:intergenic 45.0%
ACTAAGCCTGAGTGCTTAAG+AGG - chr6.2:84187189-84187208 None:intergenic 45.0%
AGGTAGGGTAATGCAATCAG+TGG - chr6.2:84187840-84187859 None:intergenic 45.0%
ATGCCCTAAGTGAGTGTGTT+TGG + chr6.2:84188369-84188388 MS.gene05499:intron 45.0%
ATGCCTTCAATCGGACAAGT+TGG + chr6.2:84186320-84186339 MS.gene05499:intron 45.0%
CAAACACGGAAACCAAAACG+GGG + chr6.2:84186200-84186219 MS.gene05499:intron 45.0%
CAATGCTGTCTAGTCAGTTC+AGG + chr6.2:84188745-84188764 MS.gene05499:CDS 45.0%
CAGGGGTTAATCGTTTGTTC+AGG + chr6.2:84189663-84189682 MS.gene05499:intron 45.0%
CATGATTGAACGCCTCATGA+GGG + chr6.2:84188833-84188852 MS.gene05499:CDS 45.0%
CATTGACATGTGTAGGACAC+CGG + chr6.2:84186540-84186559 MS.gene05499:intron 45.0%
CCACTCTCTTTATGTGGATG+GGG + chr6.2:84190373-84190392 MS.gene05499:CDS 45.0%
CCCACTCTCTTTATGTGGAT+GGG + chr6.2:84190372-84190391 MS.gene05499:CDS 45.0%
CCCATCCACATAAAGAGAGT+GGG - chr6.2:84190375-84190394 None:intergenic 45.0%
CGAAATGGATATCCCTCATG+AGG - chr6.2:84188848-84188867 None:intergenic 45.0%
GACACTACTGATCGAAAAGG+TGG - chr6.2:84186107-84186126 None:intergenic 45.0%
GCCAAAAGTGGCTGAGTTAT+AGG + chr6.2:84187352-84187371 MS.gene05499:intron 45.0%
GGGTAGAATTTGATCATGGC+AGG + chr6.2:84189644-84189663 MS.gene05499:intron 45.0%
GTGCACTCTTCTTCAGATAG+TGG - chr6.2:84190659-84190678 None:intergenic 45.0%
GTGTATGTGTGTGTCTGTGT+TGG + chr6.2:84186271-84186290 MS.gene05499:intron 45.0%
GTGTTGGACACTAACATGTG+TGG + chr6.2:84186287-84186306 MS.gene05499:intron 45.0%
TAAGCACTCAGGCTGCATTT+GGG + chr6.2:84188044-84188063 MS.gene05499:intron 45.0%
TACCCAAACACTTGCCCAAA+AGG - chr6.2:84189629-84189648 None:intergenic 45.0%
TACTGATCGAAAAGGTGGTC+AGG - chr6.2:84186102-84186121 None:intergenic 45.0%
TCTTGCCCACTCTCTTTATG+TGG + chr6.2:84190367-84190386 MS.gene05499:CDS 45.0%
TGACAATCCTTGTACAGACC+AGG - chr6.2:84190308-84190327 None:intergenic 45.0%
TGGACAAGATACCTGCTTCT+TGG - chr6.2:84188892-84188911 None:intergenic 45.0%
TGTAAGCACCTTAAGCACTC+AGG + chr6.2:84188033-84188052 MS.gene05499:intron 45.0%
TGTCGTGGATATTAGTGTCG+TGG + chr6.2:84186056-84186075 MS.gene05499:intron 45.0%
TGTTTGGATCAACGGCGAAA+TGG - chr6.2:84188863-84188882 None:intergenic 45.0%
TTAAGCACTCAGGCTGCATT+TGG + chr6.2:84188043-84188062 MS.gene05499:intron 45.0%
TTTGGTTGTTGTCCCTCAGT+AGG - chr6.2:84190521-84190540 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr6.2:84189272-84189291 MS.gene05499:intron 45.0%
! ACGCCTTCGATCAAAAGTGT+TGG + chr6.2:84186565-84186584 MS.gene05499:intron 45.0%
! ACTCGCTCAGCTTTTCCAAA+AGG - chr6.2:84189090-84189109 None:intergenic 45.0%
! AGAAGAGTGCACAGCAGATA+TGG + chr6.2:84190667-84190686 MS.gene05499:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr6.2:84189271-84189290 MS.gene05499:intron 45.0%
! CACTCTTCTTCAGATAGTGG+AGG - chr6.2:84190656-84190675 None:intergenic 45.0%
! CAGGTTTTTGAATTGGAGCC+TGG + chr6.2:84190287-84190306 MS.gene05499:intron 45.0%
! CGTTCTTTGGTTCAACCAGT+AGG + chr6.2:84185600-84185619 MS.gene05499:CDS 45.0%
! CTAGTATCAATGCCCCGTTT+TGG - chr6.2:84186215-84186234 None:intergenic 45.0%
! GCCATGAAAGAACGGTGTTA+GGG - chr6.2:84185698-84185717 None:intergenic 45.0%
! GGGTTATGGGCTATACATCA+AGG + chr6.2:84187563-84187582 MS.gene05499:intron 45.0%
! GTCCTTTTGGGCAAGTGTTT+GGG + chr6.2:84189624-84189643 MS.gene05499:intron 45.0%
! TCTTGAGGCGAATCAAGTTG+CGG + chr6.2:84187757-84187776 MS.gene05499:intron 45.0%
! TGTCCTTTTGGGCAAGTGTT+TGG + chr6.2:84189623-84189642 MS.gene05499:intron 45.0%
! TTCTTGGCATGGCAGGTTTT+TGG + chr6.2:84189721-84189740 MS.gene05499:intron 45.0%
!! ACAGGCTTTGGAGTTGATTC+AGG + chr6.2:84188988-84189007 MS.gene05499:intron 45.0%
!! GCCTATAACTCAGCCACTTT+TGG - chr6.2:84187356-84187375 None:intergenic 45.0%
!! TCAGAAGTTCTTTGGGGCAA+TGG - chr6.2:84190440-84190459 None:intergenic 45.0%
!! TTTTGGAAAAGCTGAGCGAG+TGG + chr6.2:84189089-84189108 MS.gene05499:CDS 45.0%
!!! CTTTTGGCTTCCTTAACCAG+TGG - chr6.2:84186682-84186701 None:intergenic 45.0%
!!! GGAGGAAGTACCTATCCTTT+TGG + chr6.2:84189072-84189091 MS.gene05499:CDS 45.0%
!! AAAATATTTACAAATTATTT+CGG + chr6.2:84188395-84188414 MS.gene05499:intron 5.0%
AAACAGCACCTCCAAGAAGC+AGG + chr6.2:84188878-84188897 MS.gene05499:CDS 50.0%
AAATGTTAACCAGTGCCCCG+GGG - chr6.2:84186805-84186824 None:intergenic 50.0%
AAGTAGCCAACCCCACTTAG+TGG - chr6.2:84189285-84189304 None:intergenic 50.0%
ACCGTTCTTTCATGGCGTTC+CGG + chr6.2:84185702-84185721 MS.gene05499:CDS 50.0%
AGGATAGGTACTTCCTCCTC+AGG - chr6.2:84189070-84189089 None:intergenic 50.0%
AGTAGCCAACCCCACTTAGT+GGG - chr6.2:84189284-84189303 None:intergenic 50.0%
ATTGGAGCCTGGTCTGTACA+AGG + chr6.2:84190298-84190317 MS.gene05499:CDS 50.0%
CAACCCCACTTAGTGGGATA+AGG - chr6.2:84189278-84189297 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr6.2:84189273-84189292 None:intergenic 50.0%
CCCCATCCACATAAAGAGAG+TGG - chr6.2:84190376-84190395 None:intergenic 50.0%
CGCCATGAAAGAACGGTGTT+AGG - chr6.2:84185699-84185718 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+TGG + chr6.2:84189276-84189295 MS.gene05499:intron 50.0%
GAAATGTTAACCAGTGCCCC+GGG - chr6.2:84186806-84186825 None:intergenic 50.0%
GATAGGTACTTCCTCCTCAG+GGG - chr6.2:84189068-84189087 None:intergenic 50.0%
GCACCAACTTGTCCGATTGA+AGG - chr6.2:84186326-84186345 None:intergenic 50.0%
GCATGATTGAACGCCTCATG+AGG + chr6.2:84188832-84188851 MS.gene05499:CDS 50.0%
GCCAAAAGTGGCTGGGTTAT+GGG + chr6.2:84187550-84187569 MS.gene05499:intron 50.0%
GCCCACTCTCTTTATGTGGA+TGG + chr6.2:84190371-84190390 MS.gene05499:CDS 50.0%
GCGGATTCATTGGCGAAGAT+TGG + chr6.2:84187776-84187795 MS.gene05499:intron 50.0%
GGAAATGTTAACCAGTGCCC+CGG - chr6.2:84186807-84186826 None:intergenic 50.0%
GGATAGGTACTTCCTCCTCA+GGG - chr6.2:84189069-84189088 None:intergenic 50.0%
GGTCATGTTAACTAGTGCCC+CGG + chr6.2:84186655-84186674 MS.gene05499:intron 50.0%
GTCATGTTAACTAGTGCCCC+GGG + chr6.2:84186656-84186675 MS.gene05499:intron 50.0%
GTCCAGTGTCCTGCAAATGT+CGG - chr6.2:84186988-84187007 None:intergenic 50.0%
TCATAAACCTACCCATGGCG+TGG - chr6.2:84187689-84187708 None:intergenic 50.0%
TCTGGACCTAAGCCTACTGA+GGG + chr6.2:84190506-84190525 MS.gene05499:CDS 50.0%
TGCCAAAAGTGGCTGGGTTA+TGG + chr6.2:84187549-84187568 MS.gene05499:intron 50.0%
TGTGGATGGGGATACTCATG+TGG + chr6.2:84190385-84190404 MS.gene05499:CDS 50.0%
TGTTGTCCCTCAGTAGGCTT+AGG - chr6.2:84190515-84190534 None:intergenic 50.0%
! ATAAGGGTGTGCTTGGGACT+TGG - chr6.2:84188503-84188522 None:intergenic 50.0%
! CACTCAGGCTTAGTTTGGGT+TGG + chr6.2:84187195-84187214 MS.gene05499:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr6.2:84189270-84189289 MS.gene05499:intron 50.0%
! CTTGATTCGCCTCAAGAGCA+TGG - chr6.2:84187754-84187773 None:intergenic 50.0%
! GACGGTCCTGTTTTGTCTGT+TGG - chr6.2:84189438-84189457 None:intergenic 50.0%
! GCACTGAGAGTTCTGATCGA+AGG - chr6.2:84187014-84187033 None:intergenic 50.0%
! TAAGGGTGTGCTTGGGACTT+GGG - chr6.2:84188502-84188521 None:intergenic 50.0%
! TCAGGTTGCTGGCAAAGAGA+GGG + chr6.2:84188719-84188738 MS.gene05499:CDS 50.0%
! TGTCCGATTGAAGGCATGTC+TGG - chr6.2:84186317-84186336 None:intergenic 50.0%
!! AAAGGGGAACTTCAGGTTGC+TGG + chr6.2:84188708-84188727 MS.gene05499:CDS 50.0%
!! AGTGTAAGGGCGCTTAGTCT+CGG - chr6.2:84188808-84188827 None:intergenic 50.0%
!! CTTTTGATCGAAGGCGTGTC+CGG - chr6.2:84186562-84186581 None:intergenic 50.0%
!! GCTGCATTTGGGTTGGCTTA+TGG + chr6.2:84188055-84188074 MS.gene05499:intron 50.0%
!! GGAGGTGCTGTTTGGATCAA+CGG - chr6.2:84188871-84188890 None:intergenic 50.0%
!! GTGTCAGGCTTTGTTAGCTC+TGG + chr6.2:84189745-84189764 MS.gene05499:intron 50.0%
!! TCGGACAAGTTGGTGCTACA+AGG + chr6.2:84186330-84186349 MS.gene05499:intron 50.0%
!! TGCTTCTTGGAGGTGCTGTT+TGG - chr6.2:84188879-84188898 None:intergenic 50.0%
!! TGTTAGCTCTGGTTTGTGCC+TGG + chr6.2:84189756-84189775 MS.gene05499:intron 50.0%
!! TTCAGGTTGCTGGCAAAGAG+AGG + chr6.2:84188718-84188737 MS.gene05499:CDS 50.0%
!!! TGGCAGGTTTTTGGTGTGTC+AGG + chr6.2:84189730-84189749 MS.gene05499:intron 50.0%
AATGTTAACCAGTGCCCCGG+GGG - chr6.2:84186804-84186823 None:intergenic 55.0%
CACCGACATTTGCAGGACAC+TGG + chr6.2:84186983-84187002 MS.gene05499:intron 55.0%
CACTCAGGCTGCATTTGGGT+TGG + chr6.2:84188048-84188067 MS.gene05499:intron 55.0%
CAGTGTCCTGCAAATGTCGG+TGG - chr6.2:84186985-84187004 None:intergenic 55.0%
CTGCTACTCATCCACGCCAT+GGG + chr6.2:84187675-84187694 MS.gene05499:intron 55.0%
GCCGGAACGCCATGAAAGAA+CGG - chr6.2:84185706-84185725 None:intergenic 55.0%
GGAAAAGCTGAGCGAGTGGA+AGG + chr6.2:84189093-84189112 MS.gene05499:CDS 55.0%
GGGAACACCACAAGAGTGAG+TGG + chr6.2:84190594-84190613 MS.gene05499:CDS 55.0%
GTCTGGACCTAAGCCTACTG+AGG + chr6.2:84190505-84190524 MS.gene05499:CDS 55.0%
TACTCATCCACGCCATGGGT+AGG + chr6.2:84187679-84187698 MS.gene05499:intron 55.0%
TCTGCTACTCATCCACGCCA+TGG + chr6.2:84187674-84187693 MS.gene05499:intron 55.0%
! GCTTGTGCCACTCACTCTTG+TGG - chr6.2:84190604-84190623 None:intergenic 55.0%
!! GCCCATAACCCAGCCACTTT+TGG - chr6.2:84187554-84187573 None:intergenic 55.0%
!! GTGTAAGGGCGCTTAGTCTC+GGG - chr6.2:84188807-84188826 None:intergenic 55.0%
!! GTTCTTTGGGGCAATGGTGC+AGG - chr6.2:84190434-84190453 None:intergenic 55.0%
CTTCCTTAACCAGTGCCCCC+GGG + chr6.2:84186786-84186805 MS.gene05499:intron 60.0%
CTTCCTTAACCAGTGGCCCG+GGG - chr6.2:84186675-84186694 None:intergenic 60.0%
GCAGCAGCACGTACCCTCAA+TGG - chr6.2:84189046-84189065 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+CGG + chr6.2:84186785-84186804 MS.gene05499:intron 60.0%
GCTTCCTTAACCAGTGGCCC+GGG - chr6.2:84186676-84186695 None:intergenic 60.0%
GGCTTCCTTAACCAGTGGCC+CGG - chr6.2:84186677-84186696 None:intergenic 60.0%
TCGTGGCCACCGACATTTGC+AGG + chr6.2:84186976-84186995 MS.gene05499:intron 60.0%
TTCCTTAACCAGTGCCCCCG+GGG + chr6.2:84186787-84186806 MS.gene05499:intron 60.0%
TAACTAGTGCCCCGGGCCAC+TGG + chr6.2:84186663-84186682 MS.gene05499:intron 65.0%
! ACGTGCTGCTGCCCCTGAGG+AGG + chr6.2:84189054-84189073 MS.gene05499:CDS 70.0%
! GGTACGTGCTGCTGCCCCTG+AGG + chr6.2:84189051-84189070 MS.gene05499:CDS 70.0%
! GTGCCCCGGGCCACTGGTTA+AGG + chr6.2:84186669-84186688 MS.gene05499:intron 70.0%
!! TGCCCCGGGGGCACTGGTTA+AGG - chr6.2:84186792-84186811 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr6.2:84186793-84186812 MS.gene05499:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr6.2:84186798-84186817 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 84185594 84190733 84185594 ID=MS.gene05499
chr6.2 mRNA 84185594 84190733 84185594 ID=MS.gene05499.t1;Parent=MS.gene05499
chr6.2 exon 84185594 84185727 84185594 ID=MS.gene05499.t1.exon1;Parent=MS.gene05499.t1
chr6.2 CDS 84185594 84185727 84185594 ID=cds.MS.gene05499.t1;Parent=MS.gene05499.t1
chr6.2 exon 84185812 84185941 84185812 ID=MS.gene05499.t1.exon2;Parent=MS.gene05499.t1
chr6.2 CDS 84185812 84185941 84185812 ID=cds.MS.gene05499.t1;Parent=MS.gene05499.t1
chr6.2 exon 84188699 84188899 84188699 ID=MS.gene05499.t1.exon3;Parent=MS.gene05499.t1
chr6.2 CDS 84188699 84188899 84188699 ID=cds.MS.gene05499.t1;Parent=MS.gene05499.t1
chr6.2 exon 84188992 84189159 84188992 ID=MS.gene05499.t1.exon4;Parent=MS.gene05499.t1
chr6.2 CDS 84188992 84189159 84188992 ID=cds.MS.gene05499.t1;Parent=MS.gene05499.t1
chr6.2 exon 84190290 84190733 84190290 ID=MS.gene05499.t1.exon5;Parent=MS.gene05499.t1
chr6.2 CDS 84190290 84190733 84190290 ID=cds.MS.gene05499.t1;Parent=MS.gene05499.t1
Gene Sequence

>MS.gene05499

ATGTCTCGTTCTTTGGTTCAACCAGTAGGTCAAAAGCGATTAACAAACGTAGCAGTTGTTCGTCTCAAGAAACACGGCATGCGTTTCGAAATCGCTTGTTACCCTAACACCGTTCTTTCATGGCGTTCCGGCGTGTAAGTAATTTCGAAACCCTAATATTTTGTGATTATTATGTGATTAATTGAGTTAATTTGATGGATTAATCGGTGGTTTTGTAGTGAAAAGGATATTGATGAAGTGTTGCAGTCACATACGGTTTATACGAATGTTTCCAAAGGTGTTCTTGCTAAGTCTAAGGATTTGAATGCTGCGTTTGGTACTGATGATCATTCCAGTATTTGTTTAGAGGTTTGTTGCTCGAAATGCTTAATCACTTCGATATTAGTTGTTTTGTTGCTATGAAACACCAACACGTTAATAATTTAAGAAAATGACTTGATTTAATGTAATTATATATGCCATTGTCGTGGATATTAGTGTCGTGGATATTGATACGTGTAGAATACCTGACCACCTTTTCGATCAGTAGTGTCGGTGTTGCAAATTTTTATAAAGTTAAACTTTCTTTTTATAGCTATGTCTTTTTATAGCTACGAAACACTGATACAAACACGGAAACCAAAACGGGGCATTGATACTAGTGATAATTTAAGAAAATCAATTAAATGTGATCACATGTGTATGTGTGTGTCTGTGTTGGACACTAACATGTGTGGGACACCAGACATGCCTTCAATCGGACAAGTTGGTGCTACAAGGTTTTATAGAGTTATTATATTGACTTTTTTAATAAGTTTAGGTGTTAGGAAATAAATTATTACATAAATTATGCAATTGTTGTTGAGTTTTTCTAGATAAAGTCTGCTCGAAGTTGAAAATTAGTTTAATAATTTAAGAAAATGATAAATGGAATGTAATCACGTGTTTGTGTCGCGTCTGTGTCGAACATTGACATGTGTAGGACACCGGACACGCCTTCGATCAAAAGTGTTGGTACTATAGGGTTTTATAGAGTTGTACAAAATTTTCAATAAGCTTAGGTTTTAGGAAATGAATTATTGGGTCATGTTAACTAGTGCCCCGGGCCACTGGTTAAGGAAGCCAAAAGAAGAAATTGCTAGTCAAAAAAGACACTTTTTAAGCTTTTAATGCATTGATTACACAACTTTCAATGCAAAAATTACTATATTTGCTTCCTTAACCAGTGCCCCCGGGGCACTGGTTAACATTTCCCTTATTTATGCAATTTATGCTTAGAGGTTGGTTATTCCTACTTGATCGATTCAATGTTAGTTGTTTTTATAGCCATGAAACACTGAAACTTGACACGACAATCAAAATTTAAGAAATGACATAATTGAATGTAATCACATGTGTCAATGTCGTGGCCACCGACATTTGCAGGACACTGGACACGCCTTCGATCAGAACTCTCAGTGCTACGAGTTAGAGACTTTTTAATTAGCTTAGGTGTTCAGAAATGAATTATTTACAAAAGTTATGCATATTATTGTTGCATTTTTTTGTAAAGAAAGTTTACTTTAAATTGAAATTAGTGTTGACGTTTCTCTCCTTTAACTTCTCTGTAAACACCTCTTAAGCACTCAGGCTTAGTTTGGGTTGGCGTATGATTAAATTATTTGGATTTATCTACTGAGGTATGCATTTATGAAGAGTGTTTGAGAGAGATTATAAAAAGTGTTTATCAAGTTATTACATGTCCATAAGCTTAGAAAATGAATTATTTACAGAAATCATGCCAAAAGTGGCTGAGTTATAGGCTATACATCATATAGAGTTTTTATCAAGTTATCACATGTCCATAAGCTCAGGAAATGAATTATTTACAGAAATCATGCCAAAAGTGGCTGAGTTATAAGCTATACATCATAAAGAGTGTTTATCAAGTTATCACATGTTCATAAGCTCAGGAAATGAATTATATACAGAAATAATGCCAAAAGTGGCTGGGTTATGGGCTATACATCAAGGTATTCAGTTAGCATTATCACATGGCTTTTCCAACTATTGGACAAAGTCTGATTCATTAGCTGCGATCAACTTTATTCAGCAAGGATGCTCTGCTACTCATCCACGCCATGGGTAGGTTTATGATATAAAAAAAACCGTGACTTAAGTCCCCATTTTAAAGTTCTTCCATGCTCTTGAGGCGAATCAAGTTGCGGATTCATTGGCGAAGATTGGCTTAGCTCAACCTTATTATTTGAGGGTTTATGATATTTCCACTGATTGCATTACCCTACCTAGCCTTACTAGTTGATTGTGATAGTACTCTCTTTCTAAGAGGTTTTTAGTTTCTATTTTGGGGTCTTAACCCCTAACTCCTTTTTATTCATCAAAAAAGAAAAAATAATTGTGATTTTTTTTTTTGTTGGAAAATAATGTTTATTCGCAGTTGACATTAGGTTTTGACTTCACTGTAAGCACCTTAAGCACTCAGGCTGCATTTGGGTTGGCTTATGGTTATTTATTTGAATAAGCACTGTCAAAAGTGTTTGAGTGAAACTGTTAAAATAGATTATGATATATTTTTTTCCTTTTTTGAAGAAAAATAGCTTACGATATTGTCCATACACTTTTTTCAACTTTTTTGTAACAAGTTATTCAGGATAGCTTATGAACACCACATACAACTTATATGGAAGTAGTTTAATCGCAATTTCTCTTTGATTATAGCGTTACTCATAGTTTATACATAAACGTACATGATAAACGTTTAATCAATAAGCACTTAAGTAATTTGTTTATCCAAATATGCCCTAAGTGAGTGTGTTTGGAACAAAATATTTACAAATTATTTCGGTTTATCTGATAATAATATAAGCAGTTTGACCACATTGTCTCTGATTATAGCTTATATATAAGTTTTTAATTGAGTTATTTACCCAAGTCCCAAGCACACCCTTATAACCAATTTATAACTTGCAGGAACTTTTTTATTACTGAAGAATCATAAATCTATTTTAATTGAAATGTTTTTTGAAGTTAGAAACTCATTCAAAACCAGTTTATGCATAATAACTAATTTTGAACTGTTGGTTGAGGACATTTGTGTGAATCTTATGAAATGTTTTTCTGTTGCAGATTTTAAAGAAAGGGGAACTTCAGGTTGCTGGCAAAGAGAGGGAGTCAATGCTGTCTAGTCAGTTCAGGGACATTGCCACCATTGTAATGCACAAGACTTTTAATCCCGAGACTAAGCGCCCTTACACTATCAGCATGATTGAACGCCTCATGAGGGATATCCATTTCGCCGTTGATCCAAACAGCACCTCCAAGAAGCAGGTATCTTGTCCAGTCATTCTAAATAATTCTATATAATGATTGTCTCATATAACTGTTATGACAATTTGATGATTATGAAAGTTGTATTACAGGCTTTGGAGTTGATTCAGGAGCTTCAGAAGCACTACCCTATAAAACGGTGTCCATTGAGGGTACGTGCTGCTGCCCCTGAGGAGGAAGTACCTATCCTTTTGGAAAAGCTGAGCGAGTGGAAGGCAACCGTTATTTCTAAAGAAGGGACAGCTGCTCAGCTATCTGTTGTAAGTATCTTGTGTTGCTCAGTTATTTCATGGTTCCATTTTATTCTCGGTAACATTGGGTTTTCTGTTCTAGAAGCATTGTTATAGTTGACGGTTTAATACAACAACAGCCAAGCCTTATCCCACTAAGTGGGGTTGGCTACTTAGTTGATGATTTAATGAGTTACTTATTTTTATCTCATTTTATCCAACACAAAAACAGGTCATGTTTTCAACATTTGTGATAGTTACAGGAATATGTTGATAGTCAGTTACTTTCTTTTACCAAATTTTATCCAACAGACAAAACAGGACCGTCTTTTGAATGTTTGTTTGTGATAATTCCAGGATTAGATTATTATTTAGTAACTTTCTTTTATCGCAGTTTACCTGGTTATTGTATACAGGTTTGAGAAGTTGCTCATTGGTAAAAATAAACTGGAAATACAAGGTGTATTTTATCTGGTTTCTCAGGGTTGTTTCTTGTCCTTTTGGGCAAGTGTTTGGGTAGAATTTGATCATGGCAGGGGTTAATCGTTTGTTCAGGTGCAATAGTTTTTCTTGGGCTGTTGTTTTTGATTTTTCTTGGCATGGCAGGTTTTTGGTGTGTCAGGCTTTGTTAGCTCTGGTTTGTGCCTGGTTTCCTTGTTTTAGTTGGCTCTGCTAATGCAGATTTTGTAGTTTTGATGCCTTGTACTTGGAAGCAAGTTGTTGTAGATTTTGCAAATTTTGCTGTTTCAAAAAAAAAAAAAACTAGAAATAACATGACCAAATATTCATTTGCCGCTGTTAGCTGATCATTTCTGATATTTGACATGCATTTTCTGTAAGTTGTGGCCACATTCAATCTGCTTAACAAAGAAAGTACTAACTAACCTGTGCAGAATTCAGATTCATTTATGGACTTTTCTGGTTTCACCCCTCATCTCAACAAAATAACCCATAAAAAAGCTAATGGGAGGTCCATGTTTATAAATGTTTCATGATTCTTCCATTTCAAATGTTATTACTGTTAGTCCCTGTTGTTAATTATAAATAATCCTTTCCATAAGTTGTGTCTTGTATATCTGCATTTACGTATAGGGTAAATTTTGATCTTGATTCTGCTAAAATTTCGAGGATAATTGTTCTGATTTCTAATTTGGTTGCAGGTTTTTGAATTGGAGCCTGGTCTGTACAAGGATTGTCATGACTTCGTTATGAATAAGATGCACGGAAGATTTGAAGTTCTTGCCCACTCTCTTTATGTGGATGGGGATACTCATGTGGATTACAATGATCACGAGGATATGCCTGCACCATTGCCCCAAAGAACTTCTGAATCTGTGCCTGAGCTGAATGATAAACTTCAAAAGCAAACAATTTCGTCTGGACCTAAGCCTACTGAGGGACAACAACCAAAGCAAAACAAGTGCAACACATGTGATGCGTGTTTTGAAGATGCTAAGTTGTACAGGGAACACCACAAGAGTGAGTGGCACAAGCACAATATGAAGCGTAAAACGAGGCAACTTCCTCCACTATCTGAAGAAGAGTGCACAGCAGATATGGAATTGTTTGAATCAAAATCTGATTTGAAGGAGTACTCATTTTGA
Protein sequence

>MS.gene05499.t1

MSRSLVQPVGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLNAAFGTDDHSSICLEILKKGELQVAGKERESMLSSQFRDIATIVMHKTFNPETKRPYTISMIERLMRDIHFAVDPNSTSKKQALELIQELQKHYPIKRCPLRVRAAAPEEEVPILLEKLSEWKATVISKEGTAAQLSVVFELEPGLYKDCHDFVMNKMHGRFEVLAHSLYVDGDTHVDYNDHEDMPAPLPQRTSESVPELNDKLQKQTISSGPKPTEGQQPKQNKCNTCDACFEDAKLYREHHKSEWHKHNMKRKTRQLPPLSEEECTADMELFESKSDLKEYSF