Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055028.t1 | XP_024632961.1 | 84.1 | 759 | 97 | 2 | 1 | 735 | 1 | 759 | 0.00E+00 | 1282.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055028.t1 | Q9SWG3 | 25.3 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 3.3e-53 | 211.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055028.t1 | D3YBB9 | 77.4 | 734 | 149 | 3 | 1 | 727 | 49 | 772 | 0.0e+00 | 1154.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene055028.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055028.t1 | MTR_0558s0020 | 86.149 | 296 | 40 | 1 | 1 | 295 | 1 | 296 | 0.0 | 536 |
MS.gene055028.t1 | MTR_1g083640 | 81.690 | 284 | 36 | 1 | 1 | 268 | 1 | 284 | 3.31e-168 | 485 |
MS.gene055028.t1 | MTR_8g446020 | 72.881 | 295 | 41 | 1 | 1 | 295 | 1 | 256 | 1.11e-149 | 436 |
MS.gene055028.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 1.14e-139 | 410 |
MS.gene055028.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 65 | 301 | 1 | 237 | 3.01e-138 | 411 |
MS.gene055028.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 396 | 495 | 230 | 306 | 1.60e-33 | 132 |
MS.gene055028.t1 | MTR_6g090505 | 79.592 | 49 | 10 | 0 | 567 | 615 | 314 | 362 | 2.43e-12 | 69.7 |
MS.gene055028.t1 | MTR_0337s0040 | 71.154 | 260 | 35 | 2 | 1 | 259 | 1 | 221 | 2.47e-121 | 362 |
MS.gene055028.t1 | MTR_3g008240 | 83.251 | 203 | 33 | 1 | 1 | 202 | 1 | 203 | 5.32e-117 | 350 |
MS.gene055028.t1 | MTR_4g040430 | 81.188 | 202 | 34 | 1 | 1 | 202 | 1 | 198 | 1.98e-112 | 338 |
MS.gene055028.t1 | MTR_0337s0060 | 56.014 | 291 | 31 | 3 | 447 | 737 | 21 | 214 | 3.86e-94 | 293 |
MS.gene055028.t1 | MTR_5g071590 | 72.222 | 180 | 37 | 2 | 1 | 167 | 1 | 180 | 7.92e-87 | 271 |
MS.gene055028.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 3.14e-84 | 263 |
MS.gene055028.t1 | MTR_0019s0290 | 80.921 | 152 | 29 | 0 | 82 | 233 | 9 | 160 | 2.72e-83 | 261 |
MS.gene055028.t1 | MTR_4g133495 | 73.810 | 126 | 30 | 1 | 576 | 698 | 88 | 213 | 4.33e-57 | 196 |
MS.gene055028.t1 | MTR_4g133340 | 73.810 | 126 | 30 | 1 | 576 | 698 | 88 | 213 | 4.33e-57 | 196 |
MS.gene055028.t1 | MTR_3g028680 | 82.727 | 110 | 19 | 0 | 618 | 727 | 1 | 110 | 5.09e-56 | 190 |
MS.gene055028.t1 | MTR_1281s0010 | 78.899 | 109 | 23 | 0 | 19 | 127 | 1 | 109 | 1.79e-54 | 183 |
MS.gene055028.t1 | MTR_2g067090 | 75.652 | 115 | 28 | 0 | 621 | 735 | 99 | 213 | 1.61e-50 | 178 |
MS.gene055028.t1 | MTR_6g051425 | 31.250 | 320 | 185 | 7 | 40 | 341 | 22 | 324 | 5.33e-37 | 142 |
MS.gene055028.t1 | MTR_4g008820 | 82.500 | 80 | 13 | 1 | 1 | 79 | 125 | 204 | 2.16e-31 | 131 |
MS.gene055028.t1 | MTR_8g046060 | 76.136 | 88 | 12 | 2 | 1 | 79 | 91 | 178 | 7.00e-31 | 121 |
MS.gene055028.t1 | MTR_1g070355 | 26.300 | 327 | 214 | 9 | 41 | 362 | 80 | 384 | 2.06e-18 | 89.7 |
MS.gene055028.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 2.31e-13 | 66.2 |
MS.gene055028.t1 | MTR_0402s0040 | 24.324 | 185 | 121 | 4 | 49 | 233 | 40 | 205 | 3.11e-12 | 70.1 |
MS.gene055028.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 4.58e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055028.t1 | AT4G38180 | 27.044 | 636 | 394 | 12 | 32 | 665 | 70 | 637 | 1.23e-66 | 235 |
MS.gene055028.t1 | AT4G15090 | 25.409 | 673 | 421 | 14 | 50 | 718 | 66 | 661 | 1.39e-58 | 213 |
MS.gene055028.t1 | AT4G15090 | 25.409 | 673 | 421 | 14 | 50 | 718 | 66 | 661 | 1.39e-58 | 213 |
MS.gene055028.t1 | AT4G15090 | 25.409 | 673 | 421 | 14 | 50 | 718 | 66 | 661 | 1.39e-58 | 213 |
MS.gene055028.t1 | AT4G15090 | 25.409 | 673 | 421 | 14 | 50 | 718 | 66 | 661 | 1.39e-58 | 213 |
MS.gene055028.t1 | AT4G15090 | 25.409 | 673 | 421 | 14 | 50 | 718 | 66 | 661 | 1.39e-58 | 213 |
MS.gene055028.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 1.75e-52 | 194 |
MS.gene055028.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 181 | 634 | 5.30e-52 | 194 |
MS.gene055028.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 181 | 634 | 5.30e-52 | 194 |
MS.gene055028.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 7.15e-50 | 187 |
MS.gene055028.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 7.15e-50 | 187 |
MS.gene055028.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 7.15e-50 | 187 |
MS.gene055028.t1 | AT1G76320 | 24.520 | 677 | 415 | 18 | 50 | 720 | 12 | 598 | 4.74e-49 | 184 |
MS.gene055028.t1 | AT1G76320 | 24.556 | 676 | 414 | 18 | 50 | 719 | 12 | 597 | 1.43e-48 | 183 |
MS.gene055028.t1 | AT1G76320 | 24.556 | 676 | 414 | 18 | 50 | 719 | 12 | 597 | 1.78e-48 | 183 |
MS.gene055028.t1 | AT1G76320 | 24.556 | 676 | 414 | 18 | 50 | 719 | 12 | 597 | 1.78e-48 | 183 |
MS.gene055028.t1 | AT3G22170 | 22.314 | 726 | 448 | 20 | 1 | 708 | 32 | 659 | 7.36e-45 | 173 |
MS.gene055028.t1 | AT3G22170 | 22.314 | 726 | 448 | 20 | 1 | 708 | 32 | 659 | 7.36e-45 | 173 |
MS.gene055028.t1 | AT5G18960 | 23.411 | 645 | 370 | 17 | 24 | 661 | 200 | 727 | 7.33e-44 | 170 |
MS.gene055028.t1 | AT5G18960 | 23.411 | 645 | 370 | 17 | 24 | 661 | 200 | 727 | 7.33e-44 | 170 |
MS.gene055028.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 2.56e-43 | 165 |
MS.gene055028.t1 | AT5G28530 | 24.257 | 639 | 387 | 18 | 40 | 660 | 60 | 619 | 1.90e-41 | 162 |
MS.gene055028.t1 | AT5G28530 | 24.100 | 639 | 384 | 19 | 40 | 660 | 60 | 615 | 1.21e-40 | 159 |
MS.gene055028.t1 | AT5G28530 | 24.100 | 639 | 384 | 19 | 40 | 660 | 60 | 615 | 1.21e-40 | 159 |
MS.gene055028.t1 | AT1G10240 | 23.734 | 632 | 390 | 17 | 40 | 659 | 53 | 604 | 5.85e-40 | 157 |
MS.gene055028.t1 | AT1G10240 | 23.734 | 632 | 390 | 17 | 40 | 659 | 53 | 604 | 5.85e-40 | 157 |
MS.gene055028.t1 | AT2G32250 | 23.034 | 725 | 424 | 21 | 1 | 718 | 8 | 605 | 6.75e-38 | 151 |
MS.gene055028.t1 | AT1G80010 | 23.944 | 639 | 391 | 21 | 41 | 662 | 101 | 661 | 9.03e-38 | 151 |
MS.gene055028.t1 | AT2G32250 | 23.310 | 725 | 422 | 21 | 1 | 718 | 8 | 605 | 1.17e-37 | 151 |
MS.gene055028.t1 | AT2G32250 | 23.310 | 725 | 422 | 21 | 1 | 718 | 8 | 605 | 1.17e-37 | 151 |
MS.gene055028.t1 | AT2G32250 | 23.310 | 725 | 422 | 21 | 1 | 718 | 8 | 605 | 1.17e-37 | 151 |
MS.gene055028.t1 | AT2G32250 | 23.538 | 701 | 404 | 20 | 25 | 718 | 30 | 605 | 1.47e-37 | 150 |
MS.gene055028.t1 | AT2G32250 | 23.538 | 701 | 404 | 20 | 25 | 718 | 30 | 605 | 1.47e-37 | 150 |
MS.gene055028.t1 | AT2G32250 | 23.521 | 676 | 387 | 19 | 50 | 718 | 12 | 564 | 2.30e-37 | 150 |
MS.gene055028.t1 | AT2G32250 | 23.521 | 676 | 387 | 19 | 50 | 718 | 12 | 564 | 2.41e-37 | 150 |
MS.gene055028.t1 | AT1G52520 | 23.259 | 632 | 391 | 20 | 41 | 662 | 91 | 638 | 2.54e-33 | 137 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 27 | 426 | 2.19e-28 | 122 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 495 | 615 | 1.74e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 27 | 426 | 2.19e-28 | 122 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 495 | 615 | 1.74e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 27 | 426 | 2.29e-28 | 122 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 495 | 615 | 1.82e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 41 | 440 | 2.31e-28 | 122 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 509 | 629 | 1.76e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 27 | 426 | 4.28e-28 | 121 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 495 | 615 | 1.78e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 25.000 | 456 | 273 | 12 | 41 | 483 | 27 | 426 | 4.28e-28 | 121 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 495 | 615 | 1.78e-11 | 68.2 |
MS.gene055028.t1 | AT4G19990 | 29.104 | 268 | 183 | 4 | 219 | 483 | 106 | 369 | 1.07e-27 | 119 |
MS.gene055028.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 591 | 721 | 438 | 558 | 1.75e-11 | 68.2 |
MS.gene055028.t1 | AT5G28530 | 22.099 | 629 | 350 | 21 | 40 | 660 | 60 | 556 | 1.73e-22 | 103 |
MS.gene055028.t1 | AT5G28530 | 21.940 | 629 | 347 | 22 | 40 | 660 | 60 | 552 | 8.75e-22 | 100 |
Find 109 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.4:-37480926 | MS.gene055028:CDS |
AGTCGCTTCTTTGACGTAAT+TGG | 0.173742 | 7.4:+37479791 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.4:-37480659 | MS.gene055028:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 7.4:-37481207 | MS.gene055028:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.4:-37481720 | MS.gene055028:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.4:-37481174 | MS.gene055028:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.4:+37481080 | None:intergenic |
TTCTTTGACGTAATTGGATT+TGG | 0.299426 | 7.4:+37479797 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 7.4:-37480362 | MS.gene055028:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7.4:-37480885 | MS.gene055028:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.324740 | 7.4:-37479945 | MS.gene055028:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7.4:+37481062 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.4:+37481670 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 7.4:-37480626 | MS.gene055028:CDS |
CTCAATGGTGTTCTTGAGGC+AGG | 0.359373 | 7.4:-37479953 | MS.gene055028:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 7.4:+37480069 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.4:-37480785 | MS.gene055028:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.4:-37481663 | MS.gene055028:intron |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 7.4:-37480617 | MS.gene055028:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.4:-37481671 | MS.gene055028:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.4:-37480786 | MS.gene055028:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.4:+37482200 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.4:-37480485 | MS.gene055028:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.4:-37479920 | MS.gene055028:intron |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 7.4:+37482439 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7.4:-37482429 | MS.gene055028:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.4:-37480237 | MS.gene055028:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7.4:+37480314 | None:intergenic |
CGAGAAGTAAATAAAGTTCA+AGG | 0.413853 | 7.4:-37482023 | MS.gene055028:CDS |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.4:-37482358 | MS.gene055028:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 7.4:-37480279 | MS.gene055028:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7.4:+37480313 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7.4:-37482141 | MS.gene055028:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 7.4:-37482109 | MS.gene055028:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7.4:+37481069 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.4:-37482158 | MS.gene055028:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7.4:-37482504 | MS.gene055028:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.4:-37480995 | MS.gene055028:CDS |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 7.4:+37482053 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.4:-37480236 | MS.gene055028:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 7.4:-37480831 | MS.gene055028:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.4:-37482309 | MS.gene055028:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7.4:-37481948 | MS.gene055028:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.4:+37480483 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.4:+37482164 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.4:-37482371 | MS.gene055028:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7.4:-37481880 | MS.gene055028:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.4:-37482315 | MS.gene055028:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.4:-37480469 | MS.gene055028:CDS |
TTTAAGTCTGAAAATCGAAA+AGG | 0.491010 | 7.4:+37481909 | None:intergenic |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.4:+37481194 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7.4:-37480884 | MS.gene055028:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.4:-37481867 | MS.gene055028:CDS |
CACTTTAAAACATATTGTGC+AGG | 0.492420 | 7.4:+37480136 | None:intergenic |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.4:-37480645 | MS.gene055028:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.4:+37480565 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7.4:-37481961 | MS.gene055028:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.4:+37481775 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.4:-37480798 | MS.gene055028:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.4:-37480300 | MS.gene055028:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.4:-37480780 | MS.gene055028:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7.4:+37480320 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.4:+37480677 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 7.4:-37482105 | MS.gene055028:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.4:-37480299 | MS.gene055028:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7.4:+37480488 | None:intergenic |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 7.4:-37480079 | MS.gene055028:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 7.4:-37482264 | MS.gene055028:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.4:+37480682 | None:intergenic |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 7.4:-37482275 | MS.gene055028:CDS |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.4:-37480468 | MS.gene055028:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 7.4:-37482439 | MS.gene055028:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.4:-37482263 | MS.gene055028:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 7.4:+37482065 | None:intergenic |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7.4:+37481049 | None:intergenic |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7.4:-37481813 | MS.gene055028:CDS |
GCATCTGAAATATTTCTCAA+TGG | 0.566996 | 7.4:-37479968 | MS.gene055028:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7.4:-37481945 | MS.gene055028:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.4:-37479993 | MS.gene055028:CDS |
ATTTCTCAATGGTGTTCTTG+AGG | 0.572762 | 7.4:-37479957 | MS.gene055028:CDS |
TCAATGGTGTTCTTGAGGCA+GGG | 0.576112 | 7.4:-37479952 | MS.gene055028:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.4:+37480564 | None:intergenic |
TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 7.4:-37480330 | MS.gene055028:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.4:+37480543 | None:intergenic |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7.4:-37481954 | MS.gene055028:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7.4:-37481063 | MS.gene055028:CDS |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7.4:-37481874 | MS.gene055028:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 7.4:+37480045 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7.4:-37481960 | MS.gene055028:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7.4:-37481871 | MS.gene055028:CDS |
TGACAATTCAGTTATTGATG+CGG | 0.605848 | 7.4:-37482480 | MS.gene055028:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.4:-37479990 | MS.gene055028:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.4:-37480567 | MS.gene055028:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.4:-37480482 | MS.gene055028:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 7.4:-37480384 | MS.gene055028:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 7.4:-37482515 | MS.gene055028:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 7.4:+37480829 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 7.4:-37480383 | MS.gene055028:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.4:+37482215 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7.4:-37481940 | MS.gene055028:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7.4:+37480315 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.4:-37480994 | MS.gene055028:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.4:-37480644 | MS.gene055028:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 7.4:-37482106 | MS.gene055028:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.4:+37480094 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.4:+37480523 | None:intergenic |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.4:+37480218 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7.4:-37481067 | MS.gene055028:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.4:-37480235 | MS.gene055028:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr7.4:37479997-37480016 | MS.gene055028:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | - | chr7.4:37480203-37480222 | MS.gene055028:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr7.4:37479941-37479960 | MS.gene055028:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | - | chr7.4:37480824-37480843 | MS.gene055028:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr7.4:37481456-37481475 | MS.gene055028:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr7.4:37480796-37480815 | MS.gene055028:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr7.4:37481294-37481313 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr7.4:37480003-37480022 | MS.gene055028:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr7.4:37480641-37480660 | MS.gene055028:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr7.4:37480667-37480686 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | - | chr7.4:37480206-37480225 | MS.gene055028:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr7.4:37481827-37481846 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr7.4:37481653-37481672 | MS.gene055028:intron | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr7.4:37480714-37480733 | MS.gene055028:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr7.4:37481792-37481811 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | - | chr7.4:37480207-37480226 | MS.gene055028:CDS | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr7.4:37481827-37481846 | MS.gene055028:CDS | 25.0% |
! | TTTAAGTCTGAAAATCGAAA+AGG | + | chr7.4:37480406-37480425 | None:intergenic | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr7.4:37481386-37481405 | MS.gene055028:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr7.4:37480816-37480835 | MS.gene055028:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr7.4:37481076-37481095 | MS.gene055028:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr7.4:37480554-37480573 | MS.gene055028:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | - | chr7.4:37480555-37480574 | MS.gene055028:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr7.4:37481928-37481947 | MS.gene055028:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr7.4:37479993-37480012 | None:intergenic | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr7.4:37481460-37481479 | MS.gene055028:intron | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr7.4:37481929-37481948 | MS.gene055028:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr7.4:37480887-37480906 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr7.4:37480049-37480068 | MS.gene055028:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr7.4:37480649-37480668 | MS.gene055028:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr7.4:37481427-37481446 | MS.gene055028:intron | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr7.4:37480352-37480371 | MS.gene055028:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr7.4:37481428-37481447 | MS.gene055028:intron | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr7.4:37481121-37481140 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr7.4:37482000-37482019 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr7.4:37480592-37480611 | MS.gene055028:CDS | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | + | chr7.4:37479876-37479895 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | - | chr7.4:37479873-37479892 | MS.gene055028:intron | 30.0% | |
CGAGAAGTAAATAAAGTTCA+AGG | - | chr7.4:37480289-37480308 | MS.gene055028:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr7.4:37481832-37481851 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr7.4:37480753-37480772 | MS.gene055028:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr7.4:37481830-37481849 | MS.gene055028:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr7.4:37481342-37481361 | MS.gene055028:intron | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr7.4:37482001-37482020 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr7.4:37480645-37480664 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr7.4:37480138-37480157 | MS.gene055028:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr7.4:37479883-37479902 | MS.gene055028:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr7.4:37481638-37481657 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr7.4:37480048-37480067 | MS.gene055028:CDS | 30.0% | |
TGACAATTCAGTTATTGATG+CGG | - | chr7.4:37479832-37479851 | MS.gene055028:intron | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr7.4:37480520-37480539 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr7.4:37481772-37481791 | None:intergenic | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | - | chr7.4:37480037-37480056 | MS.gene055028:CDS | 30.0% | |
TTCTTTGACGTAATTGGATT+TGG | + | chr7.4:37482518-37482537 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr7.4:37481035-37481054 | MS.gene055028:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr7.4:37480250-37480269 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr7.4:37480171-37480190 | MS.gene055028:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr7.4:37481887-37481906 | MS.gene055028:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+TGG | - | chr7.4:37482344-37482363 | MS.gene055028:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | - | chr7.4:37481950-37481969 | MS.gene055028:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr7.4:37481235-37481254 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr7.4:37481285-37481304 | MS.gene055028:intron | 30.0% |
! | TCTTTCAATTCTTTTCTTCG+TGG | - | chr7.4:37481597-37481616 | MS.gene055028:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7.4:37482500-37482519 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr7.4:37482112-37482131 | MS.gene055028:CDS | 30.0% |
!! | AGACATCAACTACTTTTGAT+TGG | - | chr7.4:37481181-37481200 | MS.gene055028:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr7.4:37482012-37482031 | MS.gene055028:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr7.4:37480728-37480747 | MS.gene055028:CDS | 30.0% |
!! | CACAAATTCTAAGGCAAAAT+AGG | + | chr7.4:37480854-37480873 | None:intergenic | 30.0% |
!! | CACTTTAAAACATATTGTGC+AGG | + | chr7.4:37482179-37482198 | None:intergenic | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr7.4:37482392-37482411 | MS.gene055028:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr7.4:37482013-37482032 | MS.gene055028:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr7.4:37482109-37482128 | MS.gene055028:CDS | 30.0% |
!!! | CACAATATGTTTTAAAGTGG+TGG | - | chr7.4:37482180-37482199 | MS.gene055028:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+TGG | - | chr7.4:37482177-37482196 | MS.gene055028:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr7.4:37481297-37481316 | MS.gene055028:intron | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr7.4:37481667-37481686 | MS.gene055028:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr7.4:37479954-37479973 | MS.gene055028:CDS | 35.0% | |
ATATCAACTTCATCTGAGAG+TGG | - | chr7.4:37479797-37479816 | MS.gene055028:CDS | 35.0% | |
ATTTCTCAATGGTGTTCTTG+AGG | - | chr7.4:37482355-37482374 | MS.gene055028:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr7.4:37481668-37481687 | MS.gene055028:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr7.4:37482002-37482021 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr7.4:37480137-37480156 | MS.gene055028:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr7.4:37481514-37481533 | MS.gene055028:intron | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | - | chr7.4:37482233-37482252 | MS.gene055028:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr7.4:37480132-37480151 | MS.gene055028:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr7.4:37480351-37480370 | MS.gene055028:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr7.4:37480074-37480093 | MS.gene055028:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr7.4:37480432-37480451 | MS.gene055028:CDS | 35.0% | |
TGTACAGAGCACAAATTCTA+AGG | + | chr7.4:37480863-37480882 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr7.4:37480115-37480134 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr7.4:37481138-37481157 | MS.gene055028:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr7.4:37480734-37480753 | MS.gene055028:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr7.4:37481310-37481329 | MS.gene055028:intron | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr7.4:37482446-37482465 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr7.4:37481527-37481546 | MS.gene055028:intron | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr7.4:37482119-37482138 | MS.gene055028:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr7.4:37481633-37481652 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr7.4:37480985-37481004 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACGTAAT+TGG | + | chr7.4:37482524-37482543 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr7.4:37479808-37479827 | MS.gene055028:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr7.4:37481844-37481863 | MS.gene055028:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr7.4:37482076-37482095 | MS.gene055028:CDS | 40.0% | |
ATTTGTGCTCTGTACAACCA+TGG | - | chr7.4:37480867-37480886 | MS.gene055028:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr7.4:37482075-37482094 | MS.gene055028:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr7.4:37482221-37482240 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr7.4:37482246-37482265 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | - | chr7.4:37481105-37481124 | MS.gene055028:CDS | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr7.4:37481843-37481862 | MS.gene055028:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr7.4:37481245-37481264 | MS.gene055028:intron | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr7.4:37480981-37481000 | MS.gene055028:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr7.4:37481246-37481265 | None:intergenic | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr7.4:37481982-37482001 | MS.gene055028:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr7.4:37482270-37482289 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | + | chr7.4:37481486-37481505 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | - | chr7.4:37481686-37481705 | MS.gene055028:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr7.4:37482438-37482457 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr7.4:37482122-37482141 | MS.gene055028:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr7.4:37481526-37481545 | MS.gene055028:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr7.4:37480088-37480107 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | - | chr7.4:37481695-37481714 | MS.gene055028:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr7.4:37480358-37480377 | MS.gene055028:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | - | chr7.4:37480562-37480581 | MS.gene055028:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr7.4:37480441-37480460 | MS.gene055028:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr7.4:37480499-37480518 | MS.gene055028:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr7.4:37480100-37480119 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr7.4:37481745-37481764 | MS.gene055028:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr7.4:37482097-37482116 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | - | chr7.4:37482468-37482487 | MS.gene055028:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr7.4:37480142-37480161 | MS.gene055028:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr7.4:37480438-37480457 | MS.gene055028:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr7.4:37481995-37482014 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | - | chr7.4:37481481-37481500 | MS.gene055028:intron | 45.0% | |
TCAATGGTGTTCTTGAGGCA+GGG | - | chr7.4:37482360-37482379 | MS.gene055028:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr7.4:37482077-37482096 | MS.gene055028:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr7.4:37480540-37480559 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr7.4:37482367-37482386 | MS.gene055028:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr7.4:37480151-37480170 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr7.4:37481549-37481568 | MS.gene055028:intron | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr7.4:37481532-37481551 | MS.gene055028:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7.4:37480154-37480173 | MS.gene055028:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr7.4:37481253-37481272 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr7.4:37481249-37481268 | MS.gene055028:intron | 50.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | + | chr7.4:37480262-37480281 | None:intergenic | 50.0% | |
CTCAATGGTGTTCTTGAGGC+AGG | - | chr7.4:37482359-37482378 | MS.gene055028:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr7.4:37481750-37481769 | None:intergenic | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | - | chr7.4:37482467-37482486 | MS.gene055028:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr7.4:37482033-37482052 | MS.gene055028:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr7.4:37481318-37481337 | MS.gene055028:intron | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr7.4:37482319-37482338 | MS.gene055028:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr7.4:37481317-37481336 | MS.gene055028:intron | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr7.4:37482482-37482501 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr7.4:37480364-37480383 | MS.gene055028:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr7.4:37481266-37481285 | None:intergenic | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr7.4:37481751-37481770 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr7.4:37482373-37482392 | MS.gene055028:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr7.4:37480445-37480464 | MS.gene055028:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr7.4:37480367-37480386 | MS.gene055028:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr7.4:37482322-37482341 | MS.gene055028:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr7.4:37480372-37480391 | MS.gene055028:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 37479788 | 37482546 | 37479788 | ID=MS.gene055028 |
chr7.4 | mRNA | 37479788 | 37482546 | 37479788 | ID=MS.gene055028.t1;Parent=MS.gene055028 |
chr7.4 | exon | 37481664 | 37482546 | 37481664 | ID=MS.gene055028.t1.exon1;Parent=MS.gene055028.t1 |
chr7.4 | CDS | 37481664 | 37482546 | 37481664 | ID=cds.MS.gene055028.t1;Parent=MS.gene055028.t1 |
chr7.4 | exon | 37479921 | 37481219 | 37479921 | ID=MS.gene055028.t1.exon2;Parent=MS.gene055028.t1 |
chr7.4 | CDS | 37479921 | 37481219 | 37479921 | ID=cds.MS.gene055028.t1;Parent=MS.gene055028.t1 |
chr7.4 | exon | 37479788 | 37479831 | 37479788 | ID=MS.gene055028.t1.exon3;Parent=MS.gene055028.t1 |
chr7.4 | CDS | 37479788 | 37479831 | 37479788 | ID=cds.MS.gene055028.t1;Parent=MS.gene055028.t1 |
Gene Sequence |
Protein sequence |