Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055164.t1 | XP_003623151.1 | 94.6 | 519 | 24 | 3 | 1 | 518 | 1 | 516 | 5.30E-251 | 876.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055164.t1 | Q9LZM8 | 51.7 | 435 | 167 | 11 | 119 | 518 | 149 | 575 | 8.1e-91 | 335.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055164.t1 | G7L5K2 | 94.6 | 519 | 24 | 3 | 1 | 518 | 1 | 516 | 3.8e-251 | 876.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055164.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055164.t1 | MTR_7g065050 | 95.954 | 519 | 17 | 3 | 1 | 518 | 1 | 516 | 0.0 | 1020 |
| MS.gene055164.t1 | MTR_4g019450 | 50.493 | 608 | 201 | 19 | 2 | 518 | 3 | 601 | 6.23e-167 | 486 |
| MS.gene055164.t1 | MTR_2g095050 | 47.719 | 285 | 109 | 7 | 127 | 379 | 235 | 511 | 2.05e-76 | 252 |
| MS.gene055164.t1 | MTR_8g098815 | 35.535 | 439 | 215 | 12 | 140 | 515 | 185 | 618 | 5.35e-64 | 219 |
| MS.gene055164.t1 | MTR_8g078480 | 42.532 | 308 | 135 | 8 | 121 | 394 | 364 | 663 | 1.69e-63 | 222 |
| MS.gene055164.t1 | MTR_5g018860 | 42.606 | 284 | 136 | 7 | 136 | 394 | 330 | 611 | 1.50e-61 | 215 |
| MS.gene055164.t1 | MTR_1g023050 | 39.869 | 306 | 149 | 6 | 144 | 426 | 174 | 467 | 3.42e-61 | 212 |
| MS.gene055164.t1 | MTR_4g051532 | 43.772 | 281 | 120 | 7 | 140 | 394 | 217 | 485 | 1.80e-60 | 211 |
| MS.gene055164.t1 | MTR_3g112300 | 39.667 | 300 | 151 | 7 | 136 | 413 | 158 | 449 | 2.78e-59 | 206 |
| MS.gene055164.t1 | MTR_3g112300 | 40.909 | 264 | 128 | 6 | 136 | 377 | 158 | 415 | 6.81e-59 | 203 |
| MS.gene055164.t1 | MTR_1g057790 | 44.674 | 291 | 132 | 7 | 139 | 408 | 160 | 442 | 1.15e-58 | 206 |
| MS.gene055164.t1 | MTR_3g112290 | 41.264 | 269 | 134 | 6 | 137 | 385 | 162 | 426 | 1.16e-58 | 201 |
| MS.gene055164.t1 | MTR_7g106320 | 52.551 | 196 | 83 | 4 | 202 | 391 | 250 | 441 | 3.13e-58 | 204 |
| MS.gene055164.t1 | MTR_3g112300 | 36.820 | 239 | 127 | 4 | 136 | 354 | 158 | 392 | 6.76e-44 | 160 |
| MS.gene055164.t1 | MTR_1g016490 | 32.394 | 284 | 166 | 8 | 137 | 399 | 240 | 518 | 7.77e-38 | 146 |
| MS.gene055164.t1 | MTR_3g112300 | 33.486 | 218 | 121 | 4 | 136 | 333 | 158 | 371 | 1.30e-31 | 125 |
| MS.gene055164.t1 | MTR_7g100250 | 57.895 | 76 | 23 | 3 | 45 | 111 | 17 | 92 | 1.30e-17 | 78.6 |
| MS.gene055164.t1 | MTR_5g011070 | 37.778 | 90 | 51 | 2 | 296 | 380 | 201 | 290 | 4.23e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055164.t1 | AT5G02030 | 47.791 | 498 | 192 | 16 | 72 | 518 | 95 | 575 | 5.54e-115 | 352 |
| MS.gene055164.t1 | AT2G27990 | 50.794 | 252 | 115 | 4 | 130 | 379 | 252 | 496 | 8.25e-76 | 250 |
| MS.gene055164.t1 | AT1G75410 | 46.792 | 265 | 109 | 9 | 135 | 377 | 162 | 416 | 4.81e-67 | 225 |
| MS.gene055164.t1 | AT1G75410 | 46.792 | 265 | 109 | 9 | 135 | 377 | 162 | 416 | 4.81e-67 | 225 |
| MS.gene055164.t1 | AT1G19700 | 46.097 | 269 | 110 | 7 | 136 | 377 | 161 | 421 | 9.30e-67 | 225 |
| MS.gene055164.t1 | AT1G19700 | 46.097 | 269 | 110 | 7 | 136 | 377 | 161 | 421 | 9.30e-67 | 225 |
| MS.gene055164.t1 | AT1G19700 | 46.097 | 269 | 110 | 7 | 136 | 377 | 161 | 421 | 9.30e-67 | 225 |
| MS.gene055164.t1 | AT1G19700 | 46.097 | 269 | 110 | 7 | 136 | 377 | 161 | 421 | 9.30e-67 | 225 |
| MS.gene055164.t1 | AT1G19700 | 46.097 | 269 | 110 | 7 | 136 | 377 | 161 | 421 | 9.30e-67 | 225 |
| MS.gene055164.t1 | AT2G16400 | 37.562 | 402 | 205 | 13 | 135 | 518 | 109 | 482 | 4.80e-66 | 221 |
| MS.gene055164.t1 | AT4G34610 | 45.161 | 248 | 115 | 5 | 144 | 377 | 144 | 384 | 1.75e-60 | 208 |
| MS.gene055164.t1 | AT4G34610 | 45.161 | 248 | 115 | 5 | 144 | 377 | 144 | 384 | 1.75e-60 | 208 |
| MS.gene055164.t1 | AT4G34610 | 45.161 | 248 | 115 | 5 | 144 | 377 | 144 | 384 | 1.75e-60 | 208 |
| MS.gene055164.t1 | AT4G34610 | 45.161 | 248 | 115 | 5 | 144 | 377 | 144 | 384 | 1.75e-60 | 208 |
| MS.gene055164.t1 | AT5G41410 | 35.616 | 438 | 201 | 17 | 141 | 517 | 194 | 611 | 3.66e-58 | 203 |
| MS.gene055164.t1 | AT4G36870 | 45.136 | 257 | 116 | 8 | 140 | 374 | 312 | 565 | 1.51e-57 | 204 |
| MS.gene055164.t1 | AT4G36870 | 45.136 | 257 | 116 | 8 | 140 | 374 | 312 | 565 | 1.51e-57 | 204 |
| MS.gene055164.t1 | AT2G27220 | 40.074 | 272 | 134 | 6 | 146 | 408 | 82 | 333 | 2.26e-57 | 197 |
| MS.gene055164.t1 | AT2G27220 | 40.074 | 272 | 134 | 6 | 146 | 408 | 82 | 333 | 2.26e-57 | 197 |
| MS.gene055164.t1 | AT2G23760 | 42.803 | 264 | 113 | 7 | 140 | 374 | 237 | 491 | 5.71e-57 | 201 |
| MS.gene055164.t1 | AT2G23760 | 42.803 | 264 | 113 | 7 | 140 | 374 | 237 | 491 | 5.71e-57 | 201 |
| MS.gene055164.t1 | AT2G23760 | 42.803 | 264 | 113 | 7 | 140 | 374 | 237 | 491 | 5.71e-57 | 201 |
| MS.gene055164.t1 | AT2G35940 | 43.295 | 261 | 111 | 5 | 141 | 368 | 190 | 446 | 1.50e-54 | 195 |
| MS.gene055164.t1 | AT2G35940 | 43.295 | 261 | 111 | 5 | 141 | 368 | 190 | 446 | 1.50e-54 | 195 |
| MS.gene055164.t1 | AT2G35940 | 43.295 | 261 | 111 | 5 | 141 | 368 | 190 | 446 | 1.50e-54 | 195 |
| MS.gene055164.t1 | AT2G27220 | 38.380 | 284 | 140 | 6 | 146 | 408 | 82 | 351 | 8.87e-54 | 188 |
| MS.gene055164.t1 | AT1G75410 | 44.215 | 242 | 103 | 9 | 135 | 354 | 162 | 393 | 9.90e-53 | 184 |
| MS.gene055164.t1 | AT1G75430 | 37.500 | 272 | 143 | 4 | 141 | 389 | 17 | 284 | 1.20e-52 | 180 |
| MS.gene055164.t1 | AT2G23760 | 36.164 | 318 | 109 | 8 | 140 | 374 | 237 | 543 | 1.27e-47 | 176 |
| MS.gene055164.t1 | AT2G27990 | 42.718 | 206 | 109 | 4 | 130 | 333 | 252 | 450 | 1.70e-44 | 163 |
| MS.gene055164.t1 | AT4G36870 | 41.597 | 238 | 114 | 8 | 140 | 355 | 312 | 546 | 1.07e-43 | 163 |
| MS.gene055164.t1 | AT4G36870 | 41.102 | 236 | 114 | 8 | 140 | 353 | 312 | 544 | 1.87e-42 | 159 |
| MS.gene055164.t1 | AT4G32980 | 31.333 | 300 | 172 | 7 | 95 | 374 | 154 | 439 | 2.32e-38 | 146 |
| MS.gene055164.t1 | AT4G32980 | 31.333 | 300 | 172 | 7 | 95 | 374 | 154 | 439 | 2.32e-38 | 146 |
| MS.gene055164.t1 | AT1G75430 | 30.556 | 216 | 123 | 4 | 141 | 333 | 17 | 228 | 4.63e-25 | 105 |
| MS.gene055164.t1 | AT1G23380 | 50.909 | 55 | 27 | 0 | 314 | 368 | 253 | 307 | 3.59e-11 | 65.1 |
| MS.gene055164.t1 | AT1G23380 | 50.909 | 55 | 27 | 0 | 314 | 368 | 255 | 309 | 3.64e-11 | 65.1 |
| MS.gene055164.t1 | AT1G62990 | 40.789 | 76 | 40 | 2 | 296 | 366 | 200 | 275 | 3.70e-11 | 64.7 |
| MS.gene055164.t1 | AT1G70510 | 50.909 | 55 | 27 | 0 | 314 | 368 | 237 | 291 | 8.90e-11 | 63.5 |
| MS.gene055164.t1 | AT1G70510 | 50.909 | 55 | 27 | 0 | 314 | 368 | 241 | 295 | 9.52e-11 | 63.5 |
Find 111 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACCTGCACAACAATTAT+TGG | 0.152856 | 7.4:+39602579 | MS.gene055164:CDS |
| ACTTCATTTGAATATGTTTC+CGG | 0.224546 | 7.4:+39604573 | MS.gene055164:CDS |
| CAATTGCAGAATAGGCAATT+TGG | 0.234987 | 7.4:+39605904 | MS.gene055164:CDS |
| CTTCATCAAAATCATGGAAT+TGG | 0.260611 | 7.4:+39605799 | MS.gene055164:CDS |
| CTGTTGTTGATCATGTTTCT+AGG | 0.276539 | 7.4:+39602494 | MS.gene055164:CDS |
| CGCAGCTCCGTATGCAAGTT+TGG | 0.286462 | 7.4:+39604605 | MS.gene055164:CDS |
| TTTGAATATGTTTCCGGCCT+TGG | 0.297614 | 7.4:+39604579 | MS.gene055164:CDS |
| CCACTCGCGGCGTAACTATC+AGG | 0.305709 | 7.4:-39605877 | None:intergenic |
| CTTCAAGAATCTAAAATGTT+TGG | 0.306695 | 7.4:-39604643 | None:intergenic |
| TCATCTCTCTGTGATTCCTT+TGG | 0.313062 | 7.4:-39605559 | None:intergenic |
| AGCGTGCTGTCAGTGTTCTT+AGG | 0.318063 | 7.4:+39604838 | MS.gene055164:CDS |
| ATGAGTGCCGCGCAGCGTTT+TGG | 0.320408 | 7.4:+39605841 | MS.gene055164:CDS |
| TCTAGGAACACGGTTCCATT+AGG | 0.325865 | 7.4:+39602511 | MS.gene055164:CDS |
| CCAATCCTAAACAGGTTTGC+AGG | 0.327106 | 7.4:+39604511 | MS.gene055164:intron |
| GAAGGTAAAGGTGAATAGTT+AGG | 0.327476 | 7.4:-39602256 | None:intergenic |
| CAGCAGCACTCATCTGATTC+TGG | 0.330179 | 7.4:-39602453 | None:intergenic |
| GTTCCATTAGGGCCATTTAC+AGG | 0.333535 | 7.4:+39602523 | MS.gene055164:CDS |
| ACAGAAGCATAACCTGTAAA+TGG | 0.347909 | 7.4:-39602535 | None:intergenic |
| AATTGCAGAATAGGCAATTT+GGG | 0.349127 | 7.4:+39605905 | MS.gene055164:CDS |
| GATGATAAAGATAAAGATAA+AGG | 0.358607 | 7.4:-39602418 | None:intergenic |
| AAGATTCAATGAAACTTGTT+TGG | 0.360190 | 7.4:-39602219 | None:intergenic |
| ATGTGTTACAGGTGTCTAAT+TGG | 0.376653 | 7.4:+39605464 | MS.gene055164:intron |
| GCGTGCTGTCAGTGTTCTTA+GGG | 0.378409 | 7.4:+39604839 | MS.gene055164:CDS |
| TAACCTGTAAATGGCCCTAA+TGG | 0.383820 | 7.4:-39602526 | None:intergenic |
| GGTAACAGTGGAATGATTAA+TGG | 0.384759 | 7.4:+39602679 | MS.gene055164:CDS |
| TGCCGTTGATGCATCTTTGA+TGG | 0.387842 | 7.4:+39602645 | MS.gene055164:CDS |
| TTTCTCTTCTGCTTTGTTGT+GGG | 0.388583 | 7.4:-39602174 | None:intergenic |
| TTTGAGTTTGATAAAGAAAA+GGG | 0.396823 | 7.4:-39602327 | None:intergenic |
| TAAATGCAAGAGTAAGGCTT+TGG | 0.400143 | 7.4:+39605491 | MS.gene055164:CDS |
| CCTCTTTGAGGTCGCCAAAC+AGG | 0.409862 | 7.4:-39604807 | None:intergenic |
| TTCATCAAAATCATGGAATT+GGG | 0.411246 | 7.4:+39605800 | MS.gene055164:CDS |
| AACCCTGGCCTTTGACTGTA+AGG | 0.418297 | 7.4:-39604765 | None:intergenic |
| CTAGGAACACGGTTCCATTA+GGG | 0.419262 | 7.4:+39602512 | MS.gene055164:CDS |
| GGTTTATAAATGCAAGAGTA+AGG | 0.420041 | 7.4:+39605485 | MS.gene055164:CDS |
| AAATCATGGAATTGGGTTAT+CGG | 0.422366 | 7.4:+39605807 | MS.gene055164:CDS |
| TCATCCAATAATTGTTGTGC+AGG | 0.423901 | 7.4:-39602583 | None:intergenic |
| ATTTGAGTTTGATAAAGAAA+AGG | 0.427297 | 7.4:-39602328 | None:intergenic |
| CGCTCAGGGAGCCCTCTTTG+AGG | 0.433129 | 7.4:-39604819 | None:intergenic |
| ACTGACCAGCTTCAGTATAT+CGG | 0.436419 | 7.4:+39604675 | MS.gene055164:CDS |
| AGGTGAATAGTTAGGGTTAA+GGG | 0.439612 | 7.4:-39602248 | None:intergenic |
| CTAATGTTGGCTAAACAAAC+TGG | 0.446507 | 7.4:+39605341 | MS.gene055164:CDS |
| AAGGTGAATAGTTAGGGTTA+AGG | 0.455170 | 7.4:-39602249 | None:intergenic |
| AACATGTCCAACAACCTGTT+TGG | 0.456323 | 7.4:+39604793 | MS.gene055164:CDS |
| CTCGGTCTTCATCAAAATCA+TGG | 0.458609 | 7.4:+39605793 | MS.gene055164:CDS |
| AACTTGTCTGTGGAGGTAGA+TGG | 0.462590 | 7.4:-39605625 | None:intergenic |
| TTGCTTGCAATACTATGATT+CGG | 0.468293 | 7.4:-39605700 | None:intergenic |
| TTTGTTTAGTACTATGGCTG+AGG | 0.471781 | 7.4:+39602126 | None:intergenic |
| AATCAACAAGTTGGTAATGT+TGG | 0.479434 | 7.4:+39605721 | MS.gene055164:CDS |
| AAGGTAAAGGTGAATAGTTA+GGG | 0.487879 | 7.4:-39602255 | None:intergenic |
| GTTTAGTACTATGGCTGAGG+AGG | 0.493207 | 7.4:+39602129 | None:intergenic |
| GCCCCTTACAGTCAAAGGCC+AGG | 0.493461 | 7.4:+39604762 | MS.gene055164:CDS |
| AGAACACTGACAGCACGCTC+AGG | 0.494420 | 7.4:-39604834 | None:intergenic |
| GAGGTCGCCAAACAGGTTGT+TGG | 0.502990 | 7.4:-39604800 | None:intergenic |
| TTACTGTTTATAGCATCTAA+AGG | 0.509725 | 7.4:-39602304 | None:intergenic |
| GATGATACACTTGGTGATGA+TGG | 0.511653 | 7.4:+39602709 | MS.gene055164:CDS |
| ATGTGTATTTCCTCCACCAT+TGG | 0.521327 | 7.4:-39605517 | None:intergenic |
| CGGAGCTGCGTTACCAAGGC+CGG | 0.523680 | 7.4:-39604592 | None:intergenic |
| TTTAGTACTATGGCTGAGGA+GGG | 0.525078 | 7.4:+39602130 | None:intergenic |
| ATTAGCTTGTCAGTATCAGT+AGG | 0.534775 | 7.4:-39605323 | None:intergenic |
| CCATCGCCGTTGTGAAACCT+TGG | 0.538655 | 7.4:-39604738 | None:intergenic |
| TTATCAGATAAGCAATAGAA+AGG | 0.539123 | 7.4:+39604707 | MS.gene055164:CDS |
| CCAAGGTTTCACAACGGCGA+TGG | 0.539915 | 7.4:+39604738 | MS.gene055164:CDS |
| CTGTCAGTGTTCTTAGGGGA+TGG | 0.544619 | 7.4:+39604844 | MS.gene055164:CDS |
| CCCTGGCCTTTGACTGTAAG+GGG | 0.546356 | 7.4:-39604763 | None:intergenic |
| GGAGTGAGCATGATGAATAA+TGG | 0.547619 | 7.4:+39605742 | MS.gene055164:CDS |
| ATTGCAAGCAATCAACAAGT+TGG | 0.553658 | 7.4:+39605712 | MS.gene055164:CDS |
| TGCGCGGCACTCATGTTGAA+AGG | 0.555710 | 7.4:-39605832 | None:intergenic |
| ATGGAGCCCCTTACAGTCAA+AGG | 0.556822 | 7.4:+39604757 | MS.gene055164:CDS |
| CCTGATAGTTACGCCGCGAG+TGG | 0.560038 | 7.4:+39605877 | MS.gene055164:CDS |
| ACTTGCCGATATACTGAAGC+TGG | 0.560095 | 7.4:-39604680 | None:intergenic |
| AGTGAAGGATCGTAAAGAGA+AGG | 0.562891 | 7.4:-39602274 | None:intergenic |
| GGATCGTAAAGAGAAGGTAA+AGG | 0.570346 | 7.4:-39602268 | None:intergenic |
| TTGGATGAGATATGTGATGT+TGG | 0.571767 | 7.4:+39602598 | MS.gene055164:CDS |
| TTTATAGCCAAACTTGCATA+CGG | 0.572894 | 7.4:-39604612 | None:intergenic |
| TGATACTGACAAGCTAATGT+TGG | 0.576970 | 7.4:+39605328 | MS.gene055164:CDS |
| AACTGGTCTATCTCGTAACC+AGG | 0.577110 | 7.4:+39605358 | MS.gene055164:CDS |
| TCTTTGATGGAAACTAATCA+TGG | 0.579826 | 7.4:+39602658 | MS.gene055164:CDS |
| TGGACATGTTCTACAAACCC+TGG | 0.582558 | 7.4:-39604780 | None:intergenic |
| GCTTTGGAAGCCAATGGTGG+AGG | 0.582607 | 7.4:+39605507 | MS.gene055164:CDS |
| GAACACTGACAGCACGCTCA+GGG | 0.586445 | 7.4:-39604833 | None:intergenic |
| TTCCATCAAAGATGCATCAA+CGG | 0.593348 | 7.4:-39602647 | None:intergenic |
| CTGTTTGGCGACCTCAAAGA+GGG | 0.600827 | 7.4:+39604808 | MS.gene055164:CDS |
| GAATCTAAAATGTTTGGACA+TGG | 0.606211 | 7.4:-39604637 | None:intergenic |
| CCCCTTACAGTCAAAGGCCA+GGG | 0.608843 | 7.4:+39604763 | MS.gene055164:CDS |
| GAAACTAATCATGGTAACAG+TGG | 0.611291 | 7.4:+39602667 | MS.gene055164:CDS |
| AATAATGGTGCAACAAGCAA+TGG | 0.619469 | 7.4:+39605757 | MS.gene055164:CDS |
| TGAATAGTTAGGGTTAAGGG+TGG | 0.619527 | 7.4:-39602245 | None:intergenic |
| AGTAAGGCTTTGGAAGCCAA+TGG | 0.623632 | 7.4:+39605501 | MS.gene055164:CDS |
| ATCGATAAACTTGTCTGTGG+AGG | 0.624502 | 7.4:-39605632 | None:intergenic |
| TGATCATGTTTCTAGGAACA+CGG | 0.625288 | 7.4:+39602501 | MS.gene055164:CDS |
| ACCCTGGCCTTTGACTGTAA+GGG | 0.626110 | 7.4:-39604764 | None:intergenic |
| CCTGTTTGGCGACCTCAAAG+AGG | 0.626862 | 7.4:+39604807 | MS.gene055164:CDS |
| CATACGGAGCTGCGTTACCA+AGG | 0.627780 | 7.4:-39604596 | None:intergenic |
| AATGGTGTATCTCTGACGCT+CGG | 0.628944 | 7.4:+39605775 | MS.gene055164:CDS |
| TGAATCACAGCAATCTCCAA+AGG | 0.631385 | 7.4:+39605543 | MS.gene055164:CDS |
| ATTGTTAACAGTGCTTGATG+AGG | 0.636658 | 7.4:+39602750 | MS.gene055164:CDS |
| TCTAAAGGTGAAATGAGTGA+AGG | 0.639475 | 7.4:-39602289 | None:intergenic |
| ATACACTTGGTGATGATGGA+AGG | 0.640811 | 7.4:+39602713 | MS.gene055164:CDS |
| AAGGCTTTGGAAGCCAATGG+TGG | 0.647272 | 7.4:+39605504 | MS.gene055164:CDS |
| ATAGAAAGGATGAATCTCCA+AGG | 0.653144 | 7.4:+39604721 | MS.gene055164:CDS |
| ATGAATCATGTATACAACGA+TGG | 0.656023 | 7.4:+39602349 | MS.gene055164:CDS |
| CGTGCTGTCAGTGTTCTTAG+GGG | 0.662282 | 7.4:+39604840 | MS.gene055164:CDS |
| TTAGCTTGTCAGTATCAGTA+GGG | 0.670053 | 7.4:-39605322 | None:intergenic |
| TGCAAGACCAAAACGCTGCG+CGG | 0.670453 | 7.4:-39605848 | None:intergenic |
| ATCCTAAACAGGTTTGCAGG+AGG | 0.676212 | 7.4:+39604514 | MS.gene055164:intron |
| GAATAGTTAGGGTTAAGGGT+GGG | 0.680467 | 7.4:-39602244 | None:intergenic |
| CTGCAATTGAAAACCACTCG+CGG | 0.686077 | 7.4:-39605890 | None:intergenic |
| AATCATGTATACAACGATGG+TGG | 0.691205 | 7.4:+39602352 | MS.gene055164:CDS |
| GGTGTTGATGATGATACACT+TGG | 0.700349 | 7.4:+39602700 | MS.gene055164:CDS |
| AACATCGATAAACTTGTCTG+TGG | 0.700915 | 7.4:-39605635 | None:intergenic |
| GAATCTCCAAGGTTTCACAA+CGG | 0.755483 | 7.4:+39604732 | MS.gene055164:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAAAACAA+TGG | + | chr7.4:39603600-39603619 | MS.gene055164:intron | 10.0% |
| !! | GAAAAAAACAATATAAAAAT+TGG | + | chr7.4:39602918-39602937 | MS.gene055164:intron | 10.0% |
| !! | TGTTAAAAAAAAAAAAACAA+TGG | + | chr7.4:39603659-39603678 | MS.gene055164:intron | 10.0% |
| !!! | ATGAATTTAATATCTTTTTT+AGG | - | chr7.4:39603155-39603174 | None:intergenic | 10.0% |
| !!! | GCAAAAAAAAATTTTTTTTA+AGG | - | chr7.4:39604012-39604031 | None:intergenic | 10.0% |
| !!! | TTAATTTAGTTTATATTGTT+TGG | + | chr7.4:39603363-39603382 | MS.gene055164:intron | 10.0% |
| !! | AAAAAACATTAAAACTCATT+TGG | + | chr7.4:39603509-39603528 | MS.gene055164:intron | 15.0% |
| !! | AATGTAATTAAAAACATTGT+CGG | + | chr7.4:39603408-39603427 | MS.gene055164:intron | 15.0% |
| !! | TATAAACTAAATTAAAAACG+TGG | - | chr7.4:39603358-39603377 | None:intergenic | 15.0% |
| !! | TCACTTTAATAAAATACAAA+TGG | - | chr7.4:39603876-39603895 | None:intergenic | 15.0% |
| !!! | ATATAATCCAATGTAATTTT+TGG | + | chr7.4:39603007-39603026 | MS.gene055164:intron | 15.0% |
| !!! | ATTTAATATCTTTTTTAGGA+AGG | - | chr7.4:39603151-39603170 | None:intergenic | 15.0% |
| !!! | ATTTTATTAAAGTGATTGAT+TGG | + | chr7.4:39603881-39603900 | MS.gene055164:intron | 15.0% |
| !!! | TATTTTGATATCTTACAAAT+CGG | - | chr7.4:39604219-39604238 | None:intergenic | 15.0% |
| !!! | TTTTTTACCAAAAATTACAT+TGG | - | chr7.4:39603017-39603036 | None:intergenic | 15.0% |
| !! | AAGGGTTTAAAAAGAATATA+TGG | - | chr7.4:39605038-39605057 | None:intergenic | 20.0% |
| !! | GATGATAAAGATAAAGATAA+AGG | - | chr7.4:39602421-39602440 | None:intergenic | 20.0% |
| !! | TGAAACAATATATATTCTAC+CGG | - | chr7.4:39604296-39604315 | None:intergenic | 20.0% |
| !! | TTAATCATGAAAAATTTACC+TGG | - | chr7.4:39605379-39605398 | None:intergenic | 20.0% |
| !!! | ATTCAGATCACTTTTTTATT+TGG | + | chr7.4:39603046-39603065 | MS.gene055164:intron | 20.0% |
| !!! | ATTTGAGTTTGATAAAGAAA+AGG | - | chr7.4:39602331-39602350 | None:intergenic | 20.0% |
| !!! | TAAATCAATACACACTTTTT+TGG | - | chr7.4:39603935-39603954 | None:intergenic | 20.0% |
| !!! | TTCAGATCACTTTTTTATTT+GGG | + | chr7.4:39603047-39603066 | MS.gene055164:intron | 20.0% |
| !!! | TTGTTTCACTTTTATTTATC+CGG | + | chr7.4:39604308-39604327 | MS.gene055164:intron | 20.0% |
| !!! | TTTGAGTTTGATAAAGAAAA+GGG | - | chr7.4:39602330-39602349 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTCTTTCTCTTTT+AGG | + | chr7.4:39602792-39602811 | MS.gene055164:intron | 20.0% |
| !!! | TTTTTTTTGCCTAAAAAGAT+TGG | + | chr7.4:39604022-39604041 | MS.gene055164:intron | 20.0% |
| ! | AAACTTATCCCATAGTATAT+CGG | - | chr7.4:39603754-39603773 | None:intergenic | 25.0% |
| ! | AATGTCCAATCTCAAAATAT+CGG | + | chr7.4:39604156-39604175 | MS.gene055164:intron | 25.0% |
| ! | AATTTCATCTTGCATCAAAT+TGG | - | chr7.4:39604346-39604365 | None:intergenic | 25.0% |
| ! | AATTTGATGCAAGATGAAAT+TGG | + | chr7.4:39604345-39604364 | MS.gene055164:intron | 25.0% |
| ! | ACTTCATTTGAATATGTTTC+CGG | + | chr7.4:39604573-39604592 | MS.gene055164:CDS | 25.0% |
| ! | AGAAAAAGTTGAAACAACAA+CGG | + | chr7.4:39605120-39605139 | MS.gene055164:intron | 25.0% |
| ! | AGATTGAAATAACACACTTA+CGG | - | chr7.4:39604891-39604910 | None:intergenic | 25.0% |
| ! | ATAAAAGTTAGACATCGTAT+TGG | + | chr7.4:39602856-39602875 | MS.gene055164:intron | 25.0% |
| ! | ATAGAATCAGAATATGCAAA+TGG | + | chr7.4:39604095-39604114 | MS.gene055164:intron | 25.0% |
| ! | ATATATATAGTGACCGAATT+TGG | - | chr7.4:39605154-39605173 | None:intergenic | 25.0% |
| ! | ATGGTATAAAATCTTTGCTA+TGG | - | chr7.4:39603857-39603876 | None:intergenic | 25.0% |
| ! | CTCATCAATACTTTACAAAA+AGG | - | chr7.4:39603791-39603810 | None:intergenic | 25.0% |
| ! | GTTGTATTTATGTGACTATA+TGG | + | chr7.4:39603715-39603734 | MS.gene055164:intron | 25.0% |
| ! | TATTAAAGTGATTGATTGGT+AGG | + | chr7.4:39603885-39603904 | MS.gene055164:intron | 25.0% |
| ! | TCGCAACATAATAAAAATAC+TGG | + | chr7.4:39603111-39603130 | MS.gene055164:intron | 25.0% |
| ! | TCTAAACACGTCTTATAAAA+TGG | - | chr7.4:39605271-39605290 | None:intergenic | 25.0% |
| ! | TTACTGTTTATAGCATCTAA+AGG | - | chr7.4:39602307-39602326 | None:intergenic | 25.0% |
| ! | TTATCAGATAAGCAATAGAA+AGG | + | chr7.4:39604707-39604726 | MS.gene055164:CDS | 25.0% |
| ! | TTCATCAAAATCATGGAATT+GGG | + | chr7.4:39605800-39605819 | MS.gene055164:CDS | 25.0% |
| ! | TTCTATAGATGATCATAGAA+GGG | - | chr7.4:39605104-39605123 | None:intergenic | 25.0% |
| ! | TTTCTATAGATGATCATAGA+AGG | - | chr7.4:39605105-39605124 | None:intergenic | 25.0% |
| !! | AAGATTCAATGAAACTTGTT+TGG | - | chr7.4:39602222-39602241 | None:intergenic | 25.0% |
| !! | CTTCAAGAATCTAAAATGTT+TGG | - | chr7.4:39604646-39604665 | None:intergenic | 25.0% |
| !! | TGGTATAAAATCTTTGCTAT+GGG | - | chr7.4:39603856-39603875 | None:intergenic | 25.0% |
| !! | TTTCAGAAACCAATCTTTTT+AGG | - | chr7.4:39604034-39604053 | None:intergenic | 25.0% |
| !!! | AAGATTGGTTTCTGAAATTT+TGG | + | chr7.4:39604037-39604056 | MS.gene055164:intron | 25.0% |
| !!! | TTTGTAAAGTATTGATGAGA+AGG | + | chr7.4:39603792-39603811 | MS.gene055164:intron | 25.0% |
| !!! | TTTTTTAGAAATCACAGTTG+AGG | + | chr7.4:39604973-39604992 | MS.gene055164:intron | 25.0% |
| AAAAGCCTGAAATAGATAGA+CGG | - | chr7.4:39605218-39605237 | None:intergenic | 30.0% | |
| AAATCATGGAATTGGGTTAT+CGG | + | chr7.4:39605807-39605826 | MS.gene055164:CDS | 30.0% | |
| AAATTGGTCATAGTAATTGC+CGG | - | chr7.4:39604330-39604349 | None:intergenic | 30.0% | |
| AACACGTCTTATAAAATGGT+TGG | - | chr7.4:39605267-39605286 | None:intergenic | 30.0% | |
| AACTTATCCCATAGTATATC+GGG | - | chr7.4:39603753-39603772 | None:intergenic | 30.0% | |
| AAGGAATATATGCTGAAGAA+TGG | + | chr7.4:39603811-39603830 | MS.gene055164:intron | 30.0% | |
| AAGGTAAAGGTGAATAGTTA+GGG | - | chr7.4:39602258-39602277 | None:intergenic | 30.0% | |
| AATGATACTGTGTAGTTTGA+GGG | + | chr7.4:39604375-39604394 | MS.gene055164:intron | 30.0% | |
| AATTGCAGAATAGGCAATTT+GGG | + | chr7.4:39605905-39605924 | MS.gene055164:CDS | 30.0% | |
| AGGAATATATGCTGAAGAAT+GGG | + | chr7.4:39603812-39603831 | MS.gene055164:intron | 30.0% | |
| ATGAATCATGTATACAACGA+TGG | + | chr7.4:39602349-39602368 | MS.gene055164:CDS | 30.0% | |
| CTTCATCAAAATCATGGAAT+TGG | + | chr7.4:39605799-39605818 | MS.gene055164:CDS | 30.0% | |
| GAAAAAGTTGAAACAACAAC+GGG | + | chr7.4:39605121-39605140 | MS.gene055164:intron | 30.0% | |
| GATTTATTCATCTTGCTCAA+AGG | + | chr7.4:39603949-39603968 | MS.gene055164:intron | 30.0% | |
| GGACATGACATTAATAACAA+TGG | + | chr7.4:39603563-39603582 | MS.gene055164:intron | 30.0% | |
| GGTTTATAAATGCAAGAGTA+AGG | + | chr7.4:39605485-39605504 | MS.gene055164:CDS | 30.0% | |
| TAGATAACTCCATTGAACTA+AGG | - | chr7.4:39603539-39603558 | None:intergenic | 30.0% | |
| TCTTTGATGGAAACTAATCA+TGG | + | chr7.4:39602658-39602677 | MS.gene055164:CDS | 30.0% | |
| TTCAATGGAGTTATCTACTT+GGG | + | chr7.4:39603542-39603561 | MS.gene055164:intron | 30.0% | |
| TTCTAGTAGTGACATGTATA+TGG | + | chr7.4:39605236-39605255 | MS.gene055164:intron | 30.0% | |
| TTCTGATTCTATCACTACTT+TGG | - | chr7.4:39604087-39604106 | None:intergenic | 30.0% | |
| TTGATTTCTTGATGTAGAAG+TGG | + | chr7.4:39604445-39604464 | MS.gene055164:intron | 30.0% | |
| TTGCTTGCAATACTATGATT+CGG | - | chr7.4:39605703-39605722 | None:intergenic | 30.0% | |
| TTTATAGCCAAACTTGCATA+CGG | - | chr7.4:39604615-39604634 | None:intergenic | 30.0% | |
| ! | ACTTTTTACCCGATATACTA+TGG | + | chr7.4:39603742-39603761 | MS.gene055164:intron | 30.0% |
| ! | CAATTTGGGAGAGATTTTAT+TGG | + | chr7.4:39605919-39605938 | MS.gene055164:CDS | 30.0% |
| ! | CTCTTTTTGTGGATAGATTT+TGG | + | chr7.4:39603687-39603706 | MS.gene055164:intron | 30.0% |
| ! | CTTTTTACCCGATATACTAT+GGG | + | chr7.4:39603743-39603762 | MS.gene055164:intron | 30.0% |
| ! | GAATCTAAAATGTTTGGACA+TGG | - | chr7.4:39604640-39604659 | None:intergenic | 30.0% |
| ! | GGAGCAAAAATCTTTTCTAA+AGG | - | chr7.4:39603914-39603933 | None:intergenic | 30.0% |
| ! | TTTTTCCGTCTATCTATTTC+AGG | + | chr7.4:39605210-39605229 | MS.gene055164:intron | 30.0% |
| !! | AATCAACAAGTTGGTAATGT+TGG | + | chr7.4:39605721-39605740 | MS.gene055164:CDS | 30.0% |
| !!! | CTTTTTTATTTGGGTTGGTT+TGG | + | chr7.4:39603056-39603075 | MS.gene055164:intron | 30.0% |
| !!! | GATCACTTTTTTATTTGGGT+TGG | + | chr7.4:39603051-39603070 | MS.gene055164:intron | 30.0% |
| AACATCGATAAACTTGTCTG+TGG | - | chr7.4:39605638-39605657 | None:intergenic | 35.0% | |
| AACATTGTCGGAAACATTGT+TGG | + | chr7.4:39603420-39603439 | MS.gene055164:intron | 35.0% | |
| AAGGTGAATAGTTAGGGTTA+AGG | - | chr7.4:39602252-39602271 | None:intergenic | 35.0% | |
| AATAATGGTGCAACAAGCAA+TGG | + | chr7.4:39605757-39605776 | MS.gene055164:CDS | 35.0% | |
| AATCATGTATACAACGATGG+TGG | + | chr7.4:39602352-39602371 | MS.gene055164:CDS | 35.0% | |
| AGGTGAATAGTTAGGGTTAA+GGG | - | chr7.4:39602251-39602270 | None:intergenic | 35.0% | |
| ATAGAAAGGATGAATCTCCA+AGG | + | chr7.4:39604721-39604740 | MS.gene055164:CDS | 35.0% | |
| ATGTGTTACAGGTGTCTAAT+TGG | + | chr7.4:39605464-39605483 | MS.gene055164:intron | 35.0% | |
| ATTGCAAGCAATCAACAAGT+TGG | + | chr7.4:39605712-39605731 | MS.gene055164:CDS | 35.0% | |
| ATTGTTAACAGTGCTTGATG+AGG | + | chr7.4:39602750-39602769 | MS.gene055164:CDS | 35.0% | |
| CAACACCGTATGTATGAATA+GGG | - | chr7.4:39602947-39602966 | None:intergenic | 35.0% | |
| CAATGATACTGTGTAGTTTG+AGG | + | chr7.4:39604374-39604393 | MS.gene055164:intron | 35.0% | |
| CAATTGCAGAATAGGCAATT+TGG | + | chr7.4:39605904-39605923 | MS.gene055164:CDS | 35.0% | |
| CTCAAACTACACAGTATCAT+TGG | - | chr7.4:39604376-39604395 | None:intergenic | 35.0% | |
| CTGTTGTTGATCATGTTTCT+AGG | + | chr7.4:39602494-39602513 | MS.gene055164:CDS | 35.0% | |
| CTGTTTCATTTCATGCTTGA+GGG | + | chr7.4:39605410-39605429 | MS.gene055164:intron | 35.0% | |
| CTTAGCGACAGAAATTATAG+AGG | + | chr7.4:39605176-39605195 | MS.gene055164:intron | 35.0% | |
| GAAACCTGCACAACAATTAT+TGG | + | chr7.4:39602579-39602598 | MS.gene055164:CDS | 35.0% | |
| GAAACTAATCATGGTAACAG+TGG | + | chr7.4:39602667-39602686 | MS.gene055164:CDS | 35.0% | |
| GAAGGTAAAGGTGAATAGTT+AGG | - | chr7.4:39602259-39602278 | None:intergenic | 35.0% | |
| GGAAACCCTATTCATACATA+CGG | + | chr7.4:39602939-39602958 | MS.gene055164:intron | 35.0% | |
| GGTAACAGTGGAATGATTAA+TGG | + | chr7.4:39602679-39602698 | MS.gene055164:CDS | 35.0% | |
| GTTCAATGGAGTTATCTACT+TGG | + | chr7.4:39603541-39603560 | MS.gene055164:intron | 35.0% | |
| TAAATGCAAGAGTAAGGCTT+TGG | + | chr7.4:39605491-39605510 | MS.gene055164:CDS | 35.0% | |
| TCAACACCGTATGTATGAAT+AGG | - | chr7.4:39602948-39602967 | None:intergenic | 35.0% | |
| TCAGCTGTGATATACACATT+GGG | + | chr7.4:39605073-39605092 | MS.gene055164:intron | 35.0% | |
| TCATCCAATAATTGTTGTGC+AGG | - | chr7.4:39602586-39602605 | None:intergenic | 35.0% | |
| TCCAATCTCAAAATATCGGT+CGG | + | chr7.4:39604160-39604179 | MS.gene055164:intron | 35.0% | |
| TCTAAAGGTGAAATGAGTGA+AGG | - | chr7.4:39602292-39602311 | None:intergenic | 35.0% | |
| TCTGTTTCATTTCATGCTTG+AGG | + | chr7.4:39605409-39605428 | MS.gene055164:intron | 35.0% | |
| TGACTATGTCTATGTGTTAC+AGG | + | chr7.4:39605453-39605472 | MS.gene055164:intron | 35.0% | |
| TGATACTGACAAGCTAATGT+TGG | + | chr7.4:39605328-39605347 | MS.gene055164:CDS | 35.0% | |
| TTCAGCTGTGATATACACAT+TGG | + | chr7.4:39605072-39605091 | MS.gene055164:intron | 35.0% | |
| TTCCATCAAAGATGCATCAA+CGG | - | chr7.4:39602650-39602669 | None:intergenic | 35.0% | |
| TTGGATGAGATATGTGATGT+TGG | + | chr7.4:39602598-39602617 | MS.gene055164:CDS | 35.0% | |
| ! | ACAGAAGCATAACCTGTAAA+TGG | - | chr7.4:39602538-39602557 | None:intergenic | 35.0% |
| ! | CAATGGTTGTACTCTTTTTG+TGG | + | chr7.4:39603676-39603695 | MS.gene055164:intron | 35.0% |
| ! | CTAATGTTGGCTAAACAAAC+TGG | + | chr7.4:39605341-39605360 | MS.gene055164:CDS | 35.0% |
| ! | CTTCTTTTCCAATCCTAAAC+AGG | + | chr7.4:39604503-39604522 | MS.gene055164:intron | 35.0% |
| ! | GTGGTTTTCAATTGCAGAAT+AGG | + | chr7.4:39605896-39605915 | MS.gene055164:CDS | 35.0% |
| ! | TTGGGAGAGATTTTATTGGT+GGG | + | chr7.4:39605923-39605942 | MS.gene055164:CDS | 35.0% |
| ! | TTTCTCTTCTGCTTTGTTGT+GGG | - | chr7.4:39602177-39602196 | None:intergenic | 35.0% |
| ! | TTTGGGAGAGATTTTATTGG+TGG | + | chr7.4:39605922-39605941 | MS.gene055164:CDS | 35.0% |
| !! | AGGTTATGCTTCTGTTTTGA+AGG | + | chr7.4:39602543-39602562 | MS.gene055164:CDS | 35.0% |
| !! | ATTAGCTTGTCAGTATCAGT+AGG | - | chr7.4:39605326-39605345 | None:intergenic | 35.0% |
| !! | GGTTATGCTTCTGTTTTGAA+GGG | + | chr7.4:39602544-39602563 | MS.gene055164:CDS | 35.0% |
| !! | TGATCATGTTTCTAGGAACA+CGG | + | chr7.4:39602501-39602520 | MS.gene055164:CDS | 35.0% |
| !! | TTAGCTTGTCAGTATCAGTA+GGG | - | chr7.4:39605325-39605344 | None:intergenic | 35.0% |
| !! | TTTGGTGTTCCTTAGTTCAA+TGG | + | chr7.4:39603527-39603546 | MS.gene055164:intron | 35.0% |
| !! | TTTTCTCTTCTGCTTTGTTG+TGG | - | chr7.4:39602178-39602197 | None:intergenic | 35.0% |
| AACATGTCCAACAACCTGTT+TGG | + | chr7.4:39604793-39604812 | MS.gene055164:CDS | 40.0% | |
| ACTGACCAGCTTCAGTATAT+CGG | + | chr7.4:39604675-39604694 | MS.gene055164:CDS | 40.0% | |
| AGTGAAGGATCGTAAAGAGA+AGG | - | chr7.4:39602277-39602296 | None:intergenic | 40.0% | |
| ATCGATAAACTTGTCTGTGG+AGG | - | chr7.4:39605635-39605654 | None:intergenic | 40.0% | |
| ATGTGTATTTCCTCCACCAT+TGG | - | chr7.4:39605520-39605539 | None:intergenic | 40.0% | |
| CCAATCTCAAAATATCGGTC+GGG | + | chr7.4:39604161-39604180 | MS.gene055164:intron | 40.0% | |
| CTCGGTCTTCATCAAAATCA+TGG | + | chr7.4:39605793-39605812 | MS.gene055164:CDS | 40.0% | |
| GAATAGTTAGGGTTAAGGGT+GGG | - | chr7.4:39602247-39602266 | None:intergenic | 40.0% | |
| GAATCTCCAAGGTTTCACAA+CGG | + | chr7.4:39604732-39604751 | MS.gene055164:CDS | 40.0% | |
| GGAGTGAGCATGATGAATAA+TGG | + | chr7.4:39605742-39605761 | MS.gene055164:CDS | 40.0% | |
| GGATCGTAAAGAGAAGGTAA+AGG | - | chr7.4:39602271-39602290 | None:intergenic | 40.0% | |
| TAACCTGTAAATGGCCCTAA+TGG | - | chr7.4:39602529-39602548 | None:intergenic | 40.0% | |
| TCATCTCTCTGTGATTCCTT+TGG | - | chr7.4:39605562-39605581 | None:intergenic | 40.0% | |
| TGAAGCGTGACTTGATAGAA+GGG | - | chr7.4:39605056-39605075 | None:intergenic | 40.0% | |
| TGAATAGTTAGGGTTAAGGG+TGG | - | chr7.4:39602248-39602267 | None:intergenic | 40.0% | |
| TGAATCACAGCAATCTCCAA+AGG | + | chr7.4:39605543-39605562 | MS.gene055164:CDS | 40.0% | |
| TTTGAATATGTTTCCGGCCT+TGG | + | chr7.4:39604579-39604598 | MS.gene055164:CDS | 40.0% | |
| ! | CAACTTTTGCGTGACTATGT+AGG | + | chr7.4:39605946-39605965 | MS.gene055164:CDS | 40.0% |
| !! | ATACACTTGGTGATGATGGA+AGG | + | chr7.4:39602713-39602732 | MS.gene055164:CDS | 40.0% |
| !! | ATTTGGGTTGGTTTGGTTTG+TGG | + | chr7.4:39603063-39603082 | MS.gene055164:intron | 40.0% |
| !! | GATGATACACTTGGTGATGA+TGG | + | chr7.4:39602709-39602728 | MS.gene055164:CDS | 40.0% |
| !! | GGTGTTGATGATGATACACT+TGG | + | chr7.4:39602700-39602719 | MS.gene055164:CDS | 40.0% |
| !! | TCATACATACGGTGTTGATG+TGG | + | chr7.4:39602950-39602969 | MS.gene055164:intron | 40.0% |
| AACTTGTCTGTGGAGGTAGA+TGG | - | chr7.4:39605628-39605647 | None:intergenic | 45.0% | |
| AATGGTGTATCTCTGACGCT+CGG | + | chr7.4:39605775-39605794 | MS.gene055164:CDS | 45.0% | |
| ACTTGCCGATATACTGAAGC+TGG | - | chr7.4:39604683-39604702 | None:intergenic | 45.0% | |
| ATCCTAAACAGGTTTGCAGG+AGG | + | chr7.4:39604514-39604533 | MS.gene055164:intron | 45.0% | |
| CCAATCCTAAACAGGTTTGC+AGG | + | chr7.4:39604511-39604530 | MS.gene055164:intron | 45.0% | |
| CTAGGAACACGGTTCCATTA+GGG | + | chr7.4:39602512-39602531 | MS.gene055164:CDS | 45.0% | |
| CTGAAGCGTGACTTGATAGA+AGG | - | chr7.4:39605057-39605076 | None:intergenic | 45.0% | |
| CTGCAATTGAAAACCACTCG+CGG | - | chr7.4:39605893-39605912 | None:intergenic | 45.0% | |
| GTTCCATTAGGGCCATTTAC+AGG | + | chr7.4:39602523-39602542 | MS.gene055164:CDS | 45.0% | |
| TACCTCCTGCAAACCTGTTT+AGG | - | chr7.4:39604519-39604538 | None:intergenic | 45.0% | |
| TACTCTTGCGAATCGAGATC+CGG | + | chr7.4:39604274-39604293 | MS.gene055164:intron | 45.0% | |
| TCTAGGAACACGGTTCCATT+AGG | + | chr7.4:39602511-39602530 | MS.gene055164:CDS | 45.0% | |
| TGCCGTTGATGCATCTTTGA+TGG | + | chr7.4:39602645-39602664 | MS.gene055164:CDS | 45.0% | |
| TGGACATGTTCTACAAACCC+TGG | - | chr7.4:39604783-39604802 | None:intergenic | 45.0% | |
| ! | AACGGGTTCGTCACCAAATT+CGG | + | chr7.4:39605138-39605157 | MS.gene055164:intron | 45.0% |
| ! | AACTGGTCTATCTCGTAACC+AGG | + | chr7.4:39605358-39605377 | MS.gene055164:CDS | 45.0% |
| ! | CCTGCAAACCTGTTTAGGAT+TGG | - | chr7.4:39604514-39604533 | None:intergenic | 45.0% |
| !! | AGTAAGGCTTTGGAAGCCAA+TGG | + | chr7.4:39605501-39605520 | MS.gene055164:CDS | 45.0% |
| !!! | CCCGACCGATATTTTGAGAT+TGG | - | chr7.4:39604164-39604183 | None:intergenic | 45.0% |
| !!! | CTTCTGTTTTGAAGGGATCG+AGG | + | chr7.4:39602551-39602570 | MS.gene055164:CDS | 45.0% |
| !!! | GCTGCTGATTTTCAGCGTTA+TGG | + | chr7.4:39602469-39602488 | MS.gene055164:CDS | 45.0% |
| AGCGTGCTGTCAGTGTTCTT+AGG | + | chr7.4:39604838-39604857 | MS.gene055164:CDS | 50.0% | |
| ATGGAGCCCCTTACAGTCAA+AGG | + | chr7.4:39604757-39604776 | MS.gene055164:CDS | 50.0% | |
| CAGCAGCACTCATCTGATTC+TGG | - | chr7.4:39602456-39602475 | None:intergenic | 50.0% | |
| CGTGCTGTCAGTGTTCTTAG+GGG | + | chr7.4:39604840-39604859 | MS.gene055164:CDS | 50.0% | |
| CTGTCAGTGTTCTTAGGGGA+TGG | + | chr7.4:39604844-39604863 | MS.gene055164:CDS | 50.0% | |
| CTGTTTGGCGACCTCAAAGA+GGG | + | chr7.4:39604808-39604827 | MS.gene055164:CDS | 50.0% | |
| GCGTGCTGTCAGTGTTCTTA+GGG | + | chr7.4:39604839-39604858 | MS.gene055164:CDS | 50.0% | |
| GCTGCAGTAATTGCATCACG+CGG | + | chr7.4:39604122-39604141 | MS.gene055164:intron | 50.0% | |
| ! | AACCCTGGCCTTTGACTGTA+AGG | - | chr7.4:39604768-39604787 | None:intergenic | 50.0% |
| ! | ACCCTGGCCTTTGACTGTAA+GGG | - | chr7.4:39604767-39604786 | None:intergenic | 50.0% |
| !! | AAGGCTTTGGAAGCCAATGG+TGG | + | chr7.4:39605504-39605523 | MS.gene055164:CDS | 50.0% |
| AGAACACTGACAGCACGCTC+AGG | - | chr7.4:39604837-39604856 | None:intergenic | 55.0% | |
| CATACGGAGCTGCGTTACCA+AGG | - | chr7.4:39604599-39604618 | None:intergenic | 55.0% | |
| CCAAGGTTTCACAACGGCGA+TGG | + | chr7.4:39604738-39604757 | MS.gene055164:CDS | 55.0% | |
| CCATCGCCGTTGTGAAACCT+TGG | - | chr7.4:39604741-39604760 | None:intergenic | 55.0% | |
| CCCCTTACAGTCAAAGGCCA+GGG | + | chr7.4:39604763-39604782 | MS.gene055164:CDS | 55.0% | |
| CCTGTTTGGCGACCTCAAAG+AGG | + | chr7.4:39604807-39604826 | MS.gene055164:CDS | 55.0% | |
| CGCAGCTCCGTATGCAAGTT+TGG | + | chr7.4:39604605-39604624 | MS.gene055164:CDS | 55.0% | |
| GAACACTGACAGCACGCTCA+GGG | - | chr7.4:39604836-39604855 | None:intergenic | 55.0% | |
| GAGGTCGCCAAACAGGTTGT+TGG | - | chr7.4:39604803-39604822 | None:intergenic | 55.0% | |
| TGCAAGACCAAAACGCTGCG+CGG | - | chr7.4:39605851-39605870 | None:intergenic | 55.0% | |
| TGCGCGGCACTCATGTTGAA+AGG | - | chr7.4:39605835-39605854 | None:intergenic | 55.0% | |
| ! | CCCTGGCCTTTGACTGTAAG+GGG | - | chr7.4:39604766-39604785 | None:intergenic | 55.0% |
| !! | CCTCTTTGAGGTCGCCAAAC+AGG | - | chr7.4:39604810-39604829 | None:intergenic | 55.0% |
| !! | GCTTTGGAAGCCAATGGTGG+AGG | + | chr7.4:39605507-39605526 | MS.gene055164:CDS | 55.0% |
| CCACTCGCGGCGTAACTATC+AGG | - | chr7.4:39605880-39605899 | None:intergenic | 60.0% | |
| CCTGATAGTTACGCCGCGAG+TGG | + | chr7.4:39605877-39605896 | MS.gene055164:CDS | 60.0% | |
| GCCCCTTACAGTCAAAGGCC+AGG | + | chr7.4:39604762-39604781 | MS.gene055164:CDS | 60.0% | |
| !! | ATGAGTGCCGCGCAGCGTTT+TGG | + | chr7.4:39605841-39605860 | MS.gene055164:CDS | 60.0% |
| CGCTCAGGGAGCCCTCTTTG+AGG | - | chr7.4:39604822-39604841 | None:intergenic | 65.0% | |
| CGGAGCTGCGTTACCAAGGC+CGG | - | chr7.4:39604595-39604614 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 39602139 | 39605972 | 39602139 | ID=MS.gene055164 |
| chr7.4 | mRNA | 39602139 | 39605972 | 39602139 | ID=MS.gene055164.t1;Parent=MS.gene055164 |
| chr7.4 | exon | 39602139 | 39602771 | 39602139 | ID=MS.gene055164.t1.exon1;Parent=MS.gene055164.t1 |
| chr7.4 | CDS | 39602139 | 39602771 | 39602139 | ID=cds.MS.gene055164.t1;Parent=MS.gene055164.t1 |
| chr7.4 | exon | 39604525 | 39604889 | 39604525 | ID=MS.gene055164.t1.exon2;Parent=MS.gene055164.t1 |
| chr7.4 | CDS | 39604525 | 39604889 | 39604525 | ID=cds.MS.gene055164.t1;Parent=MS.gene055164.t1 |
| chr7.4 | exon | 39605319 | 39605379 | 39605319 | ID=MS.gene055164.t1.exon3;Parent=MS.gene055164.t1 |
| chr7.4 | CDS | 39605319 | 39605379 | 39605319 | ID=cds.MS.gene055164.t1;Parent=MS.gene055164.t1 |
| chr7.4 | exon | 39605475 | 39605972 | 39605475 | ID=MS.gene055164.t1.exon4;Parent=MS.gene055164.t1 |
| chr7.4 | CDS | 39605475 | 39605972 | 39605475 | ID=cds.MS.gene055164.t1;Parent=MS.gene055164.t1 |
| Gene Sequence |
| Protein sequence |
