AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055272

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055272.t1 MTR_7g062220 95.455 286 13 0 1 286 11 296 0.0 571
MS.gene055272.t1 MTR_5g043880 41.509 159 74 5 114 263 124 272 1.73e-25 102
MS.gene055272.t1 MTR_4g094588 71.930 57 16 0 114 170 178 234 3.63e-23 97.4
MS.gene055272.t1 MTR_7g109800 38.854 157 71 5 114 258 145 288 5.20e-23 96.3
MS.gene055272.t1 MTR_2g033820 52.941 85 29 1 114 187 203 287 1.04e-22 96.7
MS.gene055272.t1 MTR_1g086790 66.667 57 19 0 114 170 158 214 4.95e-22 94.0
MS.gene055272.t1 MTR_1g015140 64.912 57 20 0 114 170 102 158 9.60e-22 89.7
MS.gene055272.t1 MTR_5g091390 66.667 57 19 0 114 170 157 213 2.81e-21 91.7
MS.gene055272.t1 MTR_3g104750 63.158 57 21 0 114 170 104 160 4.32e-21 87.8
MS.gene055272.t1 MTR_8g092140 64.912 57 20 0 114 170 160 216 4.85e-21 89.7
MS.gene055272.t1 MTR_3g095040 59.322 59 24 0 112 170 116 174 9.30e-21 88.2
MS.gene055272.t1 MTR_3g031220 64.912 57 20 0 114 170 365 421 1.06e-20 92.0
MS.gene055272.t1 MTR_3g031220 59.649 57 22 1 114 170 198 253 1.28e-14 73.9
MS.gene055272.t1 MTR_7g028415 61.404 57 22 0 114 170 93 149 1.29e-20 87.0
MS.gene055272.t1 MTR_7g028710 61.404 57 22 0 114 170 93 149 1.29e-20 87.0
MS.gene055272.t1 MTR_5g094430 63.158 57 21 0 114 170 252 308 1.39e-20 91.3
MS.gene055272.t1 MTR_5g094430 57.895 57 23 1 114 170 88 143 2.32e-13 70.1
MS.gene055272.t1 MTR_5g094430 63.158 57 21 0 114 170 230 286 1.42e-20 90.9
MS.gene055272.t1 MTR_5g094430 57.895 57 23 1 114 170 66 121 2.97e-13 69.7
MS.gene055272.t1 MTR_3g095080 64.912 57 20 0 114 170 168 224 1.63e-20 88.6
MS.gene055272.t1 MTR_5g094430 63.158 57 21 0 114 170 364 420 1.66e-20 91.7
MS.gene055272.t1 MTR_5g094430 57.895 57 23 1 114 170 200 255 2.70e-13 70.1
MS.gene055272.t1 MTR_3g095080 64.912 57 20 0 114 170 144 200 1.69e-20 87.8
MS.gene055272.t1 MTR_5g042920 62.712 59 22 0 112 170 318 376 1.93e-20 90.9
MS.gene055272.t1 MTR_5g042920 59.322 59 23 1 113 171 150 207 1.00e-14 74.3
MS.gene055272.t1 MTR_3g056100 63.158 57 21 0 114 170 402 458 2.29e-20 91.3
MS.gene055272.t1 MTR_3g056100 45.882 85 38 2 93 170 215 298 1.41e-13 70.9
MS.gene055272.t1 MTR_3g056100 63.158 57 21 0 114 170 415 471 2.37e-20 91.3
MS.gene055272.t1 MTR_3g056100 45.882 85 38 2 93 170 215 298 1.31e-13 71.2
MS.gene055272.t1 MTR_3g056100 63.158 57 21 0 114 170 258 314 2.53e-20 90.5
MS.gene055272.t1 MTR_3g056100 45.882 85 38 2 93 170 71 154 1.84e-13 70.5
MS.gene055272.t1 MTR_3g056100 63.158 57 21 0 114 170 271 327 2.72e-20 90.5
MS.gene055272.t1 MTR_3g056100 45.882 85 38 2 93 170 71 154 1.82e-13 70.5
MS.gene055272.t1 MTR_7g079010 63.158 57 21 0 114 170 141 197 2.80e-20 87.0
MS.gene055272.t1 MTR_4g122530 61.017 59 23 0 114 172 208 266 6.37e-20 89.4
MS.gene055272.t1 MTR_3g009470 46.226 106 44 3 114 213 495 593 1.33e-19 89.0
MS.gene055272.t1 MTR_3g009470 51.429 70 33 1 105 174 271 339 3.31e-14 73.2
MS.gene055272.t1 MTR_5g074400 63.158 57 21 0 114 170 420 476 1.45e-19 89.0
MS.gene055272.t1 MTR_5g074400 63.158 57 20 1 114 170 243 298 6.32e-16 78.2
MS.gene055272.t1 MTR_7g011820 61.017 59 23 0 112 170 408 466 1.47e-19 88.6
MS.gene055272.t1 MTR_7g011820 56.667 60 21 2 113 170 227 283 4.26e-13 69.3
MS.gene055272.t1 MTR_8g092010 55.932 59 26 0 112 170 106 164 4.76e-19 83.2
MS.gene055272.t1 MTR_4g082580 59.322 59 24 0 112 170 276 334 5.15e-19 86.3
MS.gene055272.t1 MTR_4g082580 30.667 150 90 5 24 170 63 201 1.40e-14 73.6
MS.gene055272.t1 MTR_8g007270 49.438 89 41 1 86 170 122 210 6.19e-19 83.6
MS.gene055272.t1 MTR_5g097490 57.377 61 26 0 110 170 248 308 8.54e-19 85.9
MS.gene055272.t1 MTR_4g130900 48.684 76 38 1 96 170 340 415 1.93e-18 85.5
MS.gene055272.t1 MTR_3g106060 33.918 171 92 6 31 198 72 224 2.45e-18 83.2
MS.gene055272.t1 MTR_1g009613 50.667 75 33 2 100 170 245 319 3.84e-18 83.6
MS.gene055272.t1 MTR_7g100510 60.714 56 22 0 115 170 362 417 3.87e-18 84.3
MS.gene055272.t1 MTR_7g100510 58.929 56 22 1 115 170 190 244 1.56e-13 70.5
MS.gene055272.t1 MTR_7g071120 59.649 57 23 0 114 170 324 380 5.03e-18 84.0
MS.gene055272.t1 MTR_7g071120 61.017 59 18 2 114 170 166 221 1.02e-15 77.4
MS.gene055272.t1 MTR_1g070455 49.367 79 36 2 100 174 276 354 7.14e-18 82.8
MS.gene055272.t1 MTR_4g013260 59.649 57 23 0 114 170 336 392 1.82e-17 82.4
MS.gene055272.t1 MTR_4g013260 59.649 57 23 0 114 170 184 240 3.72e-17 81.6
MS.gene055272.t1 MTR_7g109600 57.576 66 27 1 106 170 45 110 2.36e-17 80.1
MS.gene055272.t1 MTR_7g080020 57.895 57 24 0 114 170 493 549 2.75e-17 82.4
MS.gene055272.t1 MTR_7g080020 54.839 62 27 1 109 170 275 335 3.03e-13 70.1
MS.gene055272.t1 MTR_7g080000 57.895 57 24 0 114 170 432 488 2.94e-17 82.0
MS.gene055272.t1 MTR_7g080000 53.571 56 25 1 115 170 235 289 2.48e-11 64.3
MS.gene055272.t1 MTR_8g096730 50.877 57 28 0 114 170 70 126 3.61e-17 77.0
MS.gene055272.t1 MTR_1g013760 49.333 75 37 1 115 188 141 215 3.77e-17 80.1
MS.gene055272.t1 MTR_4g127040 36.220 127 69 4 54 170 178 302 4.45e-17 80.1
MS.gene055272.t1 MTR_8g087000 50.633 79 37 2 97 174 60 137 9.94e-17 78.2
MS.gene055272.t1 MTR_8g087000 50.633 79 37 2 97 174 59 136 1.14e-16 77.8
MS.gene055272.t1 MTR_3g108960 43.373 83 43 2 96 174 293 375 1.37e-16 79.3
MS.gene055272.t1 MTR_0117s0040 43.182 88 44 3 89 170 44 131 1.45e-16 77.8
MS.gene055272.t1 MTR_8g028565 48.718 78 37 2 96 172 139 214 1.54e-16 79.0
MS.gene055272.t1 MTR_6g053200 44.872 78 42 1 94 170 310 387 2.18e-16 79.3
MS.gene055272.t1 MTR_5g016610 45.570 79 39 2 96 170 178 256 2.47e-16 77.4
MS.gene055272.t1 MTR_2g032030 41.584 101 52 2 77 170 224 324 2.78e-16 78.6
MS.gene055272.t1 MTR_4g094908 45.570 79 39 2 96 170 245 323 3.22e-16 77.8
MS.gene055272.t1 MTR_8g099350 32.000 150 90 5 26 168 45 189 3.77e-16 77.8
MS.gene055272.t1 MTR_2g105060 52.632 57 26 1 115 170 95 151 4.22e-16 76.3
MS.gene055272.t1 MTR_2g105060 52.632 57 26 1 115 170 170 226 5.36e-16 77.0
MS.gene055272.t1 MTR_2g032030 42.268 97 49 2 81 170 228 324 5.64e-16 78.2
MS.gene055272.t1 MTR_1g099600 53.968 63 28 1 109 170 180 242 7.92e-16 76.6
MS.gene055272.t1 MTR_1g077780 54.237 59 27 0 112 170 60 118 8.37e-16 73.2
MS.gene055272.t1 MTR_1g078260 56.897 58 24 1 114 170 247 304 1.75e-15 76.6
MS.gene055272.t1 MTR_6g086555 55.172 58 25 1 114 170 206 263 1.75e-15 76.3
MS.gene055272.t1 MTR_2g016770 54.098 61 27 1 115 174 36 96 2.32e-15 73.6
MS.gene055272.t1 MTR_4g107970 58.621 58 23 1 114 170 178 235 2.71e-15 76.3
MS.gene055272.t1 MTR_2g088000 42.857 91 48 3 85 174 323 410 2.83e-15 76.3
MS.gene055272.t1 MTR_2g016770 54.098 61 27 1 115 174 28 88 3.13e-15 73.2
MS.gene055272.t1 MTR_4g107970 58.621 58 23 1 114 170 255 312 3.31e-15 75.9
MS.gene055272.t1 MTR_7g009730 48.611 72 35 2 100 170 206 276 3.86e-15 75.9
MS.gene055272.t1 MTR_3g053330 42.353 85 33 2 115 198 252 321 4.49e-15 75.5
MS.gene055272.t1 MTR_8g098945 53.226 62 28 1 110 170 125 186 6.51e-15 73.6
MS.gene055272.t1 MTR_4g132430 40.000 100 44 2 72 170 100 184 6.90e-15 74.3
MS.gene055272.t1 MTR_7g079040 39.130 115 65 3 112 221 152 266 7.33e-15 73.9
MS.gene055272.t1 MTR_4g094412 47.222 72 36 2 100 170 221 291 7.50e-15 74.7
MS.gene055272.t1 MTR_4g094412 47.222 72 36 2 100 170 230 300 8.28e-15 74.7
MS.gene055272.t1 MTR_3g031220 59.649 57 22 1 114 170 198 253 8.36e-15 74.3
MS.gene055272.t1 MTR_2g083870 57.895 57 23 1 115 170 81 137 1.02e-14 72.8
MS.gene055272.t1 MTR_7g110720 45.556 90 33 2 82 170 199 273 1.19e-14 73.9
MS.gene055272.t1 MTR_4g132430 52.308 65 30 1 114 177 261 325 1.19e-14 73.9
MS.gene055272.t1 MTR_7g110720 45.556 90 33 2 82 170 172 246 1.20e-14 73.9
MS.gene055272.t1 MTR_2g023930 38.938 113 52 3 60 170 265 362 1.23e-14 74.3
MS.gene055272.t1 MTR_3g090860 57.377 61 23 1 111 168 130 190 1.47e-14 73.2
MS.gene055272.t1 MTR_4g007060 52.632 57 26 1 115 170 129 185 2.69e-14 72.0
MS.gene055272.t1 MTR_3g009470 51.429 70 33 1 105 174 271 339 3.10e-14 72.8
MS.gene055272.t1 MTR_4g007060 52.632 57 26 1 115 170 163 219 3.22e-14 72.0
MS.gene055272.t1 MTR_5g067680 52.542 59 25 1 114 169 202 260 4.37e-14 72.0
MS.gene055272.t1 MTR_2g024380 50.000 76 32 3 112 182 249 323 6.47e-14 72.0
MS.gene055272.t1 MTR_8g067635 47.368 76 39 1 96 170 331 406 7.59e-14 71.6
MS.gene055272.t1 MTR_1g013790 50.877 57 27 1 115 170 102 158 7.89e-14 70.1
MS.gene055272.t1 MTR_2g024350 53.333 60 27 1 112 170 6 65 8.93e-14 69.3
MS.gene055272.t1 MTR_8g067650 53.333 60 27 1 112 170 337 396 4.71e-13 69.3
MS.gene055272.t1 MTR_2g045360 52.632 57 26 1 115 170 212 268 5.94e-13 68.9
MS.gene055272.t1 MTR_7g117200 49.275 69 28 2 107 168 107 175 1.25e-12 67.4
MS.gene055272.t1 MTR_8g069935 49.153 59 29 1 113 170 330 388 3.25e-12 66.6
MS.gene055272.t1 MTR_8g027860 44.737 76 35 2 100 168 118 193 3.41e-12 66.2
MS.gene055272.t1 MTR_5g074200 50.000 58 28 1 114 171 220 276 8.47e-12 65.1
MS.gene055272.t1 MTR_4g049760 50.877 57 27 1 115 170 291 347 1.78e-11 64.7
MS.gene055272.t1 MTR_2g075610 50.000 60 27 1 112 168 27 86 1.84e-11 62.4
MS.gene055272.t1 MTR_8g005750 53.448 58 24 1 114 168 103 160 2.40e-11 63.2
MS.gene055272.t1 MTR_0002s1250 51.724 58 25 1 114 168 111 168 3.21e-11 62.8
MS.gene055272.t1 MTR_2g075750 50.000 60 27 1 112 168 26 85 4.81e-11 60.8
MS.gene055272.t1 MTR_2g075700 49.231 65 30 1 112 173 142 206 5.97e-11 62.4
MS.gene055272.t1 MTR_3g093830 52.632 57 24 1 115 168 128 184 9.72e-11 61.6
MS.gene055272.t1 MTR_7g073430 51.724 58 25 1 114 168 122 179 9.88e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055272.t1 AT5G43290 42.146 261 121 11 20 265 21 266 4.53e-52 172
MS.gene055272.t1 AT1G69310 41.558 154 74 4 114 264 147 287 2.11e-28 110
MS.gene055272.t1 AT1G69310 41.558 154 74 4 114 264 147 287 2.11e-28 110
MS.gene055272.t1 AT1G69310 41.558 154 74 4 114 264 147 287 2.11e-28 110
MS.gene055272.t1 AT5G49520 32.597 181 100 3 114 275 221 398 1.88e-24 102
MS.gene055272.t1 AT1G69310 38.961 154 74 5 114 264 147 283 6.32e-23 95.9
MS.gene055272.t1 AT4G39410 55.844 77 34 0 114 190 223 299 9.92e-23 95.9
MS.gene055272.t1 AT2G47260 66.102 59 20 0 114 172 174 232 1.08e-22 96.3
MS.gene055272.t1 AT1G29860 68.421 57 18 0 114 170 136 192 2.78e-22 94.0
MS.gene055272.t1 AT4G18170 68.421 57 18 0 114 170 172 228 5.22e-22 94.0
MS.gene055272.t1 AT2G25000 33.702 181 101 7 3 170 29 203 7.92e-22 92.4
MS.gene055272.t1 AT1G64000 64.912 57 20 0 114 170 114 170 9.91e-22 90.5
MS.gene055272.t1 AT5G46350 66.667 57 19 0 114 170 183 239 3.30e-21 92.0
MS.gene055272.t1 AT2G04880 63.077 65 24 0 114 178 283 347 4.15e-21 92.8
MS.gene055272.t1 AT2G04880 67.500 40 13 0 114 153 111 150 1.45e-11 64.7
MS.gene055272.t1 AT2G03340 62.712 59 22 0 112 170 413 471 4.21e-21 93.2
MS.gene055272.t1 AT2G03340 45.833 96 40 3 83 170 214 305 7.06e-15 74.7
MS.gene055272.t1 AT1G13960 62.712 59 22 0 112 170 254 312 4.32e-21 92.0
MS.gene055272.t1 AT1G13960 62.069 58 21 1 113 170 75 131 3.21e-15 75.5
MS.gene055272.t1 AT2G04880 63.077 65 24 0 114 178 307 371 5.48e-21 92.8
MS.gene055272.t1 AT2G04880 67.500 40 13 0 114 153 111 150 1.31e-11 65.1
MS.gene055272.t1 AT1G13960 62.712 59 22 0 112 170 407 465 6.24e-21 92.8
MS.gene055272.t1 AT1G13960 62.069 58 21 1 113 170 228 284 2.84e-15 75.9
MS.gene055272.t1 AT5G41570 63.158 57 21 0 114 170 98 154 9.51e-21 87.4
MS.gene055272.t1 AT2G25000 34.132 167 92 6 17 170 21 182 2.15e-20 88.2
MS.gene055272.t1 AT5G13080 61.404 57 22 0 114 170 67 123 2.74e-20 85.5
MS.gene055272.t1 AT3G62340 64.912 57 20 0 114 170 118 174 3.20e-20 88.2
MS.gene055272.t1 AT5G07100 63.158 57 21 0 114 170 141 197 3.76e-20 87.0
MS.gene055272.t1 AT5G07100 39.450 109 48 2 110 218 20 110 1.04e-14 72.0
MS.gene055272.t1 AT5G07100 63.158 57 21 0 114 170 141 197 3.76e-20 87.0
MS.gene055272.t1 AT5G07100 39.450 109 48 2 110 218 20 110 1.04e-14 72.0
MS.gene055272.t1 AT5G07100 63.158 57 21 0 114 170 141 197 3.76e-20 87.0
MS.gene055272.t1 AT5G07100 39.450 109 48 2 110 218 20 110 1.04e-14 72.0
MS.gene055272.t1 AT5G07100 63.158 57 21 0 114 170 141 197 3.76e-20 87.0
MS.gene055272.t1 AT5G07100 39.450 109 48 2 110 218 20 110 1.04e-14 72.0
MS.gene055272.t1 AT2G25000 33.939 165 91 6 19 170 1 160 5.78e-20 86.7
MS.gene055272.t1 AT2G25000 33.939 165 91 6 19 170 1 160 5.78e-20 86.7
MS.gene055272.t1 AT2G46130 63.158 57 21 0 114 170 30 86 6.13e-20 83.2
MS.gene055272.t1 AT3G01970 59.649 57 23 0 114 170 65 121 8.49e-20 84.0
MS.gene055272.t1 AT5G07100 63.158 57 21 0 114 170 234 290 1.10e-19 87.4
MS.gene055272.t1 AT5G07100 39.450 109 48 2 110 218 113 203 1.14e-14 73.2
MS.gene055272.t1 AT5G56270 63.158 57 21 0 114 170 487 543 1.21e-19 89.4
MS.gene055272.t1 AT5G56270 57.576 66 27 1 109 174 268 332 2.09e-16 79.7
MS.gene055272.t1 AT3G01080 61.017 59 23 0 112 170 304 362 3.00e-19 87.4
MS.gene055272.t1 AT3G01080 58.621 58 23 1 113 170 166 222 2.36e-13 70.1
MS.gene055272.t1 AT3G01080 61.017 59 23 0 112 170 342 400 3.22e-19 87.4
MS.gene055272.t1 AT3G01080 59.649 57 22 1 114 170 205 260 2.32e-13 70.1
MS.gene055272.t1 AT5G26170 57.895 57 24 0 114 170 113 169 4.45e-19 82.8
MS.gene055272.t1 AT2G44745 63.793 58 21 0 114 171 145 202 4.99e-19 84.0
MS.gene055272.t1 AT4G26640 42.500 120 51 3 114 222 205 317 5.66e-19 86.3
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 33 90 4.93e-14 72.0
MS.gene055272.t1 AT4G26640 42.500 120 51 3 114 222 205 317 5.66e-19 86.3
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 33 90 4.93e-14 72.0
MS.gene055272.t1 AT4G26640 42.500 120 51 3 114 222 205 317 5.66e-19 86.3
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 33 90 4.93e-14 72.0
MS.gene055272.t1 AT4G26640 42.500 120 51 3 114 222 205 317 5.66e-19 86.3
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 33 90 4.93e-14 72.0
MS.gene055272.t1 AT4G26640 61.404 57 22 0 114 170 341 397 6.35e-19 87.0
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 169 226 4.26e-14 72.4
MS.gene055272.t1 AT4G26640 61.404 57 22 0 114 170 309 365 6.74e-19 86.7
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 137 194 4.44e-14 72.4
MS.gene055272.t1 AT4G26640 61.404 57 22 0 114 170 381 437 7.02e-19 86.7
MS.gene055272.t1 AT4G26640 59.322 59 23 1 112 170 209 266 4.49e-14 72.4
MS.gene055272.t1 AT2G38470 61.404 57 22 0 114 170 362 418 4.04e-18 84.3
MS.gene055272.t1 AT2G38470 62.069 58 21 1 113 170 183 239 7.82e-16 77.8
MS.gene055272.t1 AT5G64810 54.386 57 26 0 114 170 110 166 6.25e-18 80.5
MS.gene055272.t1 AT4G30935 46.835 79 41 1 93 170 309 387 6.89e-18 83.6
MS.gene055272.t1 AT4G30935 53.571 56 25 1 115 170 169 223 1.75e-11 64.7
MS.gene055272.t1 AT4G31550 50.667 75 33 2 100 170 228 302 8.31e-18 82.4
MS.gene055272.t1 AT4G31550 50.667 75 33 2 100 170 229 303 8.48e-18 82.4
MS.gene055272.t1 AT4G31800 54.237 59 26 1 115 172 112 170 8.56e-18 80.9
MS.gene055272.t1 AT2G21900 54.386 57 26 0 114 170 109 165 1.03e-17 80.1
MS.gene055272.t1 AT1G55600 54.098 61 28 0 114 174 307 367 1.06e-17 83.2
MS.gene055272.t1 AT2G30250 62.500 56 21 0 115 170 329 384 1.16e-17 82.8
MS.gene055272.t1 AT2G30250 56.140 57 24 1 114 170 166 221 1.27e-12 67.8
MS.gene055272.t1 AT4G31800 54.237 59 26 1 115 172 177 235 1.50e-17 81.6
MS.gene055272.t1 AT2G23320 46.835 79 38 2 96 170 219 297 1.66e-17 81.3
MS.gene055272.t1 AT2G34830 35.366 164 84 6 28 170 110 272 1.83e-17 82.4
MS.gene055272.t1 AT2G34830 35.366 164 84 6 28 170 119 281 2.13e-17 82.0
MS.gene055272.t1 AT2G37260 57.895 57 24 0 114 170 349 405 3.73e-17 81.3
MS.gene055272.t1 AT2G37260 58.929 56 22 1 115 170 166 220 3.81e-14 72.4
MS.gene055272.t1 AT2G37260 57.895 57 24 0 114 170 269 325 3.75e-17 80.9
MS.gene055272.t1 AT2G37260 58.929 56 22 1 115 170 86 140 4.22e-14 72.0
MS.gene055272.t1 AT2G37260 57.895 57 24 0 114 170 267 323 3.76e-17 80.9
MS.gene055272.t1 AT2G37260 58.929 56 22 1 115 170 84 138 4.25e-14 72.0
MS.gene055272.t1 AT4G26440 56.897 58 25 0 114 171 372 429 4.12e-17 81.6
MS.gene055272.t1 AT4G26440 46.154 91 33 2 114 204 178 252 3.31e-16 79.0
MS.gene055272.t1 AT5G28650 49.367 79 36 2 96 170 241 319 4.18e-17 80.5
MS.gene055272.t1 AT2G30590 42.708 96 49 3 83 174 281 374 8.12e-17 80.1
MS.gene055272.t1 AT5G52830 60.000 60 23 1 112 170 163 222 1.01e-16 79.7
MS.gene055272.t1 AT3G04670 48.101 79 37 2 96 170 241 319 1.43e-16 79.0
MS.gene055272.t1 AT1G30650 44.643 112 52 4 68 170 164 274 1.77e-16 79.3
MS.gene055272.t1 AT2G24570 49.333 75 34 2 100 170 226 300 2.98e-16 77.8
MS.gene055272.t1 AT1G80840 54.386 57 25 1 115 170 147 203 6.31e-16 76.6
MS.gene055272.t1 AT1G68150 44.578 83 44 2 89 170 211 292 7.58e-16 77.4
MS.gene055272.t1 AT1G29280 57.895 57 23 1 115 170 75 131 1.04e-15 75.5
MS.gene055272.t1 AT4G01250 48.718 78 37 2 96 172 112 187 1.18e-15 75.9
MS.gene055272.t1 AT1G62300 40.206 97 56 2 76 170 273 369 1.48e-15 77.0
MS.gene055272.t1 AT4G24240 41.758 91 47 3 84 170 250 338 2.09e-15 75.9
MS.gene055272.t1 AT2G46400 48.148 81 34 2 96 168 81 161 5.02e-15 73.9
MS.gene055272.t1 AT5G15130 56.897 58 24 1 114 170 227 284 5.16e-15 75.5
MS.gene055272.t1 AT5G15130 56.897 58 24 1 114 170 185 242 5.29e-15 75.1
MS.gene055272.t1 AT3G58710 59.649 57 22 1 115 170 71 127 6.73e-15 73.6
MS.gene055272.t1 AT3G58710 59.649 57 22 1 115 170 72 128 6.81e-15 73.6
MS.gene055272.t1 AT5G45050 46.429 84 42 2 90 170 1126 1209 1.20e-14 74.7
MS.gene055272.t1 AT5G45050 46.429 84 42 2 90 170 1154 1237 1.29e-14 74.3
MS.gene055272.t1 AT2G46130 56.140 57 21 1 114 170 30 82 1.30e-14 68.9
MS.gene055272.t1 AT5G45050 46.429 84 42 2 90 170 1015 1098 1.47e-14 74.3
MS.gene055272.t1 AT4G23550 55.000 60 26 1 112 170 138 197 1.99e-14 72.4
MS.gene055272.t1 AT4G04450 53.125 64 29 1 115 177 199 262 2.97e-14 72.8
MS.gene055272.t1 AT1G18860 45.783 83 42 3 89 170 216 296 3.76e-14 72.8
MS.gene055272.t1 AT2G40740 56.897 58 22 1 114 168 173 230 3.92e-14 71.6
MS.gene055272.t1 AT4G04450 53.125 64 29 1 115 177 293 356 4.69e-14 72.4
MS.gene055272.t1 AT2G40740 54.098 61 25 1 114 171 182 242 4.78e-14 71.2
MS.gene055272.t1 AT4G22070 57.895 57 23 1 115 170 298 354 6.81e-14 72.0
MS.gene055272.t1 AT4G22070 57.895 57 23 1 115 170 298 354 6.81e-14 72.0
MS.gene055272.t1 AT4G22070 57.895 57 23 1 115 170 298 354 6.81e-14 72.0
MS.gene055272.t1 AT4G22070 57.895 57 23 1 115 170 298 354 6.81e-14 72.0
MS.gene055272.t1 AT3G01080 59.649 57 22 1 114 170 205 260 1.13e-13 70.5
MS.gene055272.t1 AT4G01720 55.172 58 25 1 114 170 239 296 4.58e-13 69.3
MS.gene055272.t1 AT5G24110 35.897 117 58 4 69 168 54 170 1.03e-12 67.4
MS.gene055272.t1 AT4G11070 52.459 61 26 1 111 168 106 166 2.50e-12 66.2
MS.gene055272.t1 AT4G11070 52.459 61 26 1 111 168 138 198 2.56e-12 66.6
MS.gene055272.t1 AT1G66560 49.153 59 27 1 114 169 103 161 3.45e-12 65.5
MS.gene055272.t1 AT4G23810 50.820 61 27 1 111 168 155 215 1.45e-11 64.3
MS.gene055272.t1 AT5G01900 41.121 107 48 5 115 206 111 217 1.63e-11 63.5
MS.gene055272.t1 AT1G69810 49.153 59 28 2 114 170 203 261 1.97e-11 64.3
MS.gene055272.t1 AT2G40750 50.000 58 26 1 114 168 152 209 2.17e-11 63.9
MS.gene055272.t1 AT1G69810 49.153 59 28 2 114 170 145 203 2.33e-11 63.9
MS.gene055272.t1 AT1G66550 44.444 63 32 1 114 173 103 165 4.56e-11 62.0
MS.gene055272.t1 AT1G66550 44.444 63 32 1 114 173 108 170 5.17e-11 62.0

Find 70 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACTTCACTTGCTTTA+TGG 0.118410 7.4:-41655285 None:intergenic
AGAAAATAATTTCTTGTAAT+TGG 0.178549 7.4:+41652804 MS.gene055272:CDS
TTGTGTACGGTCCAATAAAA+TGG 0.226460 7.4:-41655371 None:intergenic
CTTCACTTGCTTTATGGTCT+TGG 0.238976 7.4:-41655279 None:intergenic
TTCATTTCAAATATTTATTC+AGG 0.250036 7.4:+41652956 MS.gene055272:CDS
TTGATGAAAATTGTTGAAAT+TGG 0.253295 7.4:-41653030 None:intergenic
TGAAGAGTTTACCTAGGATT+TGG 0.255247 7.4:-41653306 None:intergenic
AACCCAATCTAGTAATTCTT+TGG 0.266740 7.4:+41655336 MS.gene055272:CDS
AATTACTAGATTGGGTTTCA+TGG 0.303705 7.4:-41655330 None:intergenic
ATTGTTGAAATTGGTTACTA+TGG 0.305605 7.4:-41653021 None:intergenic
GATTGTCCCACTATGAAATA+AGG 0.327297 7.4:-41655193 None:intergenic
TTCACTTGCTTTATGGTCTT+GGG 0.328292 7.4:-41655278 None:intergenic
GGATATAGGTGGAGGAAGTA+TGG 0.340368 7.4:+41653261 MS.gene055272:CDS
ACTTTGAAAATCAAATGTTT+TGG 0.341685 7.4:+41653219 MS.gene055272:CDS
ACCTTTCTCCTCCAGCATAA+TGG 0.348390 7.4:+41655515 MS.gene055272:CDS
TCACTATCAACATTGTTTGT+AGG 0.350268 7.4:-41655463 None:intergenic
TTCCAAAGAATTACTAGATT+GGG 0.353886 7.4:-41655338 None:intergenic
GAAGAGTTTACCTAGGATTT+GGG 0.355592 7.4:-41653305 None:intergenic
AGGATTTGGGCTATTCTTGA+TGG 0.375798 7.4:-41653292 None:intergenic
AGAAGGGTTGCTTGAAGATA+TGG 0.390745 7.4:+41655420 MS.gene055272:CDS
TGCTTATCCTTATTTCATAG+TGG 0.391267 7.4:+41655186 MS.gene055272:CDS
GTTCCAAAGAATTACTAGAT+TGG 0.395321 7.4:-41655339 None:intergenic
AAATGAACCTATTAAAAGCT+TGG 0.401637 7.4:-41652940 None:intergenic
TGGACTTCTTCATTGGTGGA+TGG 0.401908 7.4:-41655231 None:intergenic
GCTTCTTAGCACCACACCTT+GGG 0.406138 7.4:-41655096 None:intergenic
CACTATCAACATTGTTTGTA+GGG 0.407829 7.4:-41655462 None:intergenic
TAAGTGATTATGAGAGTGTC+AGG 0.409746 7.4:-41655142 None:intergenic
GCCTTGGACTTCTTCATTGG+TGG 0.411270 7.4:-41655235 None:intergenic
TGAAGAATCATGACTTAAGT+TGG 0.411681 7.4:-41652912 None:intergenic
GATTGGGTGATGATGGATAT+AGG 0.412049 7.4:+41653247 MS.gene055272:CDS
GTAGCCTTGGACTTCTTCAT+TGG 0.412428 7.4:-41655238 None:intergenic
GATACGGTCCAAGAAAATTT+CGG 0.416624 7.4:+41655394 MS.gene055272:CDS
GGCAATGGATTGGGTGATGA+TGG 0.417116 7.4:+41653240 MS.gene055272:CDS
AGGAGAAAGGTGTGAGGAGA+AGG 0.422919 7.4:-41655503 None:intergenic
GGACTTCTTCATTGGTGGAT+GGG 0.423548 7.4:-41655230 None:intergenic
GAGAGTGTCAGGGTCTTCAT+TGG 0.440141 7.4:-41655131 None:intergenic
TGAAGATATGGTGCCATTCA+TGG 0.441742 7.4:+41655432 MS.gene055272:CDS
TCCTTGTGAAGAGGTAGCCT+TGG 0.445914 7.4:-41655251 None:intergenic
TCAGAGTTTCTATATTAGAA+AGG 0.451303 7.4:+41653169 MS.gene055272:intron
CAAGAAAATTTCGGCTCAGA+AGG 0.452520 7.4:+41655403 MS.gene055272:CDS
AAACCATAAATCCATTATGC+TGG 0.479881 7.4:-41655526 None:intergenic
GTAGGGTTTCTAACCATGAA+TGG 0.482456 7.4:-41655445 None:intergenic
TGTGTACGGTCCAATAAAAT+GGG 0.485883 7.4:-41655370 None:intergenic
CTTGCTTTATGGTCTTGGGT+TGG 0.490234 7.4:-41655274 None:intergenic
GCTTATCCTTATTTCATAGT+GGG 0.490566 7.4:+41655187 MS.gene055272:CDS
CTTGGACCGTATCTTGTGTA+CGG 0.501432 7.4:-41655384 None:intergenic
CTTAGCACCACACCTTGGGT+TGG 0.505309 7.4:-41655092 None:intergenic
TCAAGAATAGCCCAAATCCT+AGG 0.505398 7.4:+41653295 MS.gene055272:CDS
GAACAAACAGGAGTTACTAT+AGG 0.514245 7.4:+41655065 MS.gene055272:intron
TCCATTATGCTGGAGGAGAA+AGG 0.514937 7.4:-41655516 None:intergenic
ACTCTCATAATCACTTATGA+AGG 0.527480 7.4:+41655148 MS.gene055272:CDS
ATTGGACCGTACACAAGATA+CGG 0.536511 7.4:+41655378 MS.gene055272:CDS
TGCTTCTTAGCACCACACCT+TGG 0.538042 7.4:-41655097 None:intergenic
TTGGGTTGGTCCTTGTGAAG+AGG 0.546121 7.4:-41655260 None:intergenic
AAGGTGTGGTGCTAAGAAGC+AGG 0.570713 7.4:+41655099 MS.gene055272:CDS
AAGGATAAGCAAAGTGCAAG+TGG 0.571322 7.4:-41655174 None:intergenic
AAGAAAATTTCGGCTCAGAA+GGG 0.589966 7.4:+41655404 MS.gene055272:CDS
TGCTGGAGGAGAAAGGTGTG+AGG 0.602724 7.4:-41655509 None:intergenic
CCATAAATCCATTATGCTGG+AGG 0.605529 7.4:-41655523 None:intergenic
AATTTCTTGTAATTGGTCAG+AGG 0.607735 7.4:+41652811 MS.gene055272:CDS
AAAGCAAGTGAAGTTCATGA+AGG 0.612429 7.4:+41655289 MS.gene055272:CDS
TCATGTGGCAACATAAGAAG+AGG 0.619719 7.4:-41652872 None:intergenic
TCCAAGGCTACCTCTTCACA+AGG 0.631287 7.4:+41655250 MS.gene055272:CDS
AGGTGCACCAACCCAAGGTG+TGG 0.643144 7.4:+41655085 MS.gene055272:CDS
ACTATAGGTGCACCAACCCA+AGG 0.643448 7.4:+41655080 MS.gene055272:CDS
GTGATGATGGATATAGGTGG+AGG 0.658043 7.4:+41653253 MS.gene055272:CDS
TGGGTGATGATGGATATAGG+TGG 0.674806 7.4:+41653250 MS.gene055272:CDS
ACTTCAGATACTCTCTCATG+TGG 0.678108 7.4:-41652887 None:intergenic
TCCACCAATGAAGAAGTCCA+AGG 0.685535 7.4:+41655234 MS.gene055272:CDS
AAGTGATTATGAGAGTGTCA+GGG 0.690845 7.4:-41655141 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAGTTAAAATTCTA+AGG + chr7.4:41654035-41654054 MS.gene055272:intron 15.0%
!! AACATCGTATAAAATTTATA+AGG - chr7.4:41653826-41653845 None:intergenic 15.0%
!! AGAAAATAATTTCTTGTAAT+TGG + chr7.4:41652804-41652823 MS.gene055272:CDS 15.0%
!! TTCATTTCAAATATTTATTC+AGG + chr7.4:41652956-41652975 MS.gene055272:CDS 15.0%
!!! ATTTTGCACTTTTATTTTTA+AGG - chr7.4:41654829-41654848 None:intergenic 15.0%
!!! GATAAATAGTTGAATATTTT+AGG - chr7.4:41654236-41654255 None:intergenic 15.0%
!!! TTTTATAGTTGAATATCAAT+TGG + chr7.4:41654153-41654172 MS.gene055272:intron 15.0%
!!! TTTTGCACTTTTATTTTTAA+GGG - chr7.4:41654828-41654847 None:intergenic 15.0%
!! AATGAGTTATACATACAAAA+GGG + chr7.4:41654854-41654873 MS.gene055272:intron 20.0%
!! AATGCATATATATAGTACTT+TGG + chr7.4:41653410-41653429 MS.gene055272:intron 20.0%
!! GAGAATGAATGATTATTTAA+AGG - chr7.4:41654095-41654114 None:intergenic 20.0%
!! TACTATATATATGCATTAAC+AGG - chr7.4:41653407-41653426 None:intergenic 20.0%
!! TTACTCATTAATCATATAGT+CGG - chr7.4:41654124-41654143 None:intergenic 20.0%
!! TTGATGAAAATTGTTGAAAT+TGG - chr7.4:41653033-41653052 None:intergenic 20.0%
!!! ACTTTGAAAATCAAATGTTT+TGG + chr7.4:41653219-41653238 MS.gene055272:CDS 20.0%
!!! ATATTCAACTATAAAAGTGT+GGG - chr7.4:41654149-41654168 None:intergenic 20.0%
!!! ATTAATGGAATTGTCAATTT+TGG - chr7.4:41654576-41654595 None:intergenic 20.0%
!!! CATTTTAAGATAACAAAATG+AGG - chr7.4:41653901-41653920 None:intergenic 20.0%
!!! TATAAAATTTGAAACTTGCA+AGG - chr7.4:41654263-41654282 None:intergenic 20.0%
!!! TTTTTAAACCAATCATACTA+TGG - chr7.4:41654897-41654916 None:intergenic 20.0%
! AAATGAACCTATTAAAAGCT+TGG - chr7.4:41652943-41652962 None:intergenic 25.0%
! AATCTTCTCAAATTAGCTAA+GGG - chr7.4:41654995-41655014 None:intergenic 25.0%
! ATTAGACACATCAAATAAGT+TGG - chr7.4:41653130-41653149 None:intergenic 25.0%
! ATTGTTGAAATTGGTTACTA+TGG - chr7.4:41653024-41653043 None:intergenic 25.0%
! CAATGAGTTATACATACAAA+AGG + chr7.4:41654853-41654872 MS.gene055272:intron 25.0%
! GATATTCAACTATAAAAGTG+TGG - chr7.4:41654150-41654169 None:intergenic 25.0%
! TAATCTTCTCAAATTAGCTA+AGG - chr7.4:41654996-41655015 None:intergenic 25.0%
! TATATATGCATTAACAGGAT+TGG - chr7.4:41653402-41653421 None:intergenic 25.0%
! TCAGAGTTTCTATATTAGAA+AGG + chr7.4:41653169-41653188 MS.gene055272:intron 25.0%
! TGGAAAAATTTACTACTTGT+GGG - chr7.4:41653957-41653976 None:intergenic 25.0%
! TTCCAAAGAATTACTAGATT+GGG - chr7.4:41655341-41655360 None:intergenic 25.0%
! TTGGAAAAATTTACTACTTG+TGG - chr7.4:41653958-41653977 None:intergenic 25.0%
!! ACTTGCATGGTAATTTTATT+AGG + chr7.4:41653085-41653104 MS.gene055272:intron 25.0%
!! CATCAATAATGCTTCAATTT+TGG - chr7.4:41653643-41653662 None:intergenic 25.0%
!! CTAGACACTATCAATTTTAT+AGG - chr7.4:41653523-41653542 None:intergenic 25.0%
!! GCAAGTTTCAAATTTTATAG+TGG + chr7.4:41654264-41654283 MS.gene055272:intron 25.0%
!! TATTCAACTATAAAAGTGTG+GGG - chr7.4:41654148-41654167 None:intergenic 25.0%
!! TCTAAAAAATGCTGCTTAAA+AGG + chr7.4:41654310-41654329 MS.gene055272:intron 25.0%
!! TTCAACAATTTTCATCAACA+AGG + chr7.4:41653035-41653054 MS.gene055272:CDS 25.0%
!!! AAAATCAAATGTTTTGGCAA+TGG + chr7.4:41653225-41653244 MS.gene055272:CDS 25.0%
!!! ATCACAAATTTTTTATGCCA+TGG + chr7.4:41655043-41655062 MS.gene055272:intron 25.0%
!!! CATTTTTTTGTTAACTTGCA+TGG + chr7.4:41653072-41653091 MS.gene055272:intron 25.0%
!!! TAAATCAGTTTTGTTTGAGA+AGG - chr7.4:41653452-41653471 None:intergenic 25.0%
!!! TCAAACGACTAACATTTTTT+AGG + chr7.4:41653862-41653881 MS.gene055272:intron 25.0%
!!! TTTTAAGGGTATGTACAAAA+GGG - chr7.4:41654814-41654833 None:intergenic 25.0%
!!! TTTTTAAGGGTATGTACAAA+AGG - chr7.4:41654815-41654834 None:intergenic 25.0%
AACCCAATCTAGTAATTCTT+TGG + chr7.4:41655336-41655355 MS.gene055272:CDS 30.0%
AATTACTAGATTGGGTTTCA+TGG - chr7.4:41655333-41655352 None:intergenic 30.0%
AATTTCTTGTAATTGGTCAG+AGG + chr7.4:41652811-41652830 MS.gene055272:CDS 30.0%
ACTCTCATAATCACTTATGA+AGG + chr7.4:41655148-41655167 MS.gene055272:CDS 30.0%
ATCTTAAAATGTAAGCCGTT+TGG + chr7.4:41653910-41653929 MS.gene055272:intron 30.0%
ATTCCATTAATGTGTACCTA+AGG + chr7.4:41654585-41654604 MS.gene055272:intron 30.0%
CACTATCAACATTGTTTGTA+GGG - chr7.4:41655465-41655484 None:intergenic 30.0%
GCAAGTATTTAGGAAAGATT+TGG - chr7.4:41653991-41654010 None:intergenic 30.0%
GGTATTATAGTCATTCAGTT+AGG - chr7.4:41654370-41654389 None:intergenic 30.0%
GTTCCAAAGAATTACTAGAT+TGG - chr7.4:41655342-41655361 None:intergenic 30.0%
TCACTATCAACATTGTTTGT+AGG - chr7.4:41655466-41655485 None:intergenic 30.0%
TGAAGAATCATGACTTAAGT+TGG - chr7.4:41652915-41652934 None:intergenic 30.0%
TTAAACCAATCATACTATGG+TGG - chr7.4:41654894-41654913 None:intergenic 30.0%
TTAGGTTTAGTTGCATGAAT+TGG + chr7.4:41653103-41653122 MS.gene055272:intron 30.0%
TTTATCCACCATAGTATGAT+TGG + chr7.4:41654886-41654905 MS.gene055272:intron 30.0%
! AAGAGCAGAATTAGCTTAAA+AGG + chr7.4:41654516-41654535 MS.gene055272:intron 30.0%
! AAGATTTGGAATGTCAACAT+TGG - chr7.4:41653977-41653996 None:intergenic 30.0%
! ACTCATTTCACCCATTTTAT+TGG + chr7.4:41655360-41655379 MS.gene055272:CDS 30.0%
! AGCATTTTCAATATCTGAGA+TGG - chr7.4:41652987-41653006 None:intergenic 30.0%
! CAAAAGACCAAGCTTTTAAT+AGG + chr7.4:41652933-41652952 MS.gene055272:CDS 30.0%
! CTTTTGTACGGAAAATACTT+GGG + chr7.4:41654626-41654645 MS.gene055272:intron 30.0%
! GCTTATCCTTATTTCATAGT+GGG + chr7.4:41655187-41655206 MS.gene055272:CDS 30.0%
! TGCTTATCCTTATTTCATAG+TGG + chr7.4:41655186-41655205 MS.gene055272:CDS 30.0%
! TTTAAGGGTATGTACAAAAG+GGG - chr7.4:41654813-41654832 None:intergenic 30.0%
!! AGTTGAGTTGATACATGTTA+TGG - chr7.4:41654069-41654088 None:intergenic 30.0%
!! GCACTTGTAAGTATTTTAGA+AGG - chr7.4:41653790-41653809 None:intergenic 30.0%
!! TTTTCAATATCTGAGATGGT+AGG - chr7.4:41652983-41653002 None:intergenic 30.0%
!!! AAATGTTTTGGCAATGGATT+GGG + chr7.4:41653231-41653250 MS.gene055272:CDS 30.0%
!!! TTTTTTTTCGGAAGTTTGGT+TGG + chr7.4:41654470-41654489 MS.gene055272:intron 30.0%
AAAGCAAGTGAAGTTCATGA+AGG + chr7.4:41655289-41655308 MS.gene055272:CDS 35.0%
AAGAAAATTTCGGCTCAGAA+GGG + chr7.4:41655404-41655423 MS.gene055272:CDS 35.0%
ACAAAAGCTACTACTAGCAT+TGG - chr7.4:41654613-41654632 None:intergenic 35.0%
ACAACACATACAACACATCT+GGG - chr7.4:41654710-41654729 None:intergenic 35.0%
ACACATTTCCACATAACATC+TGG - chr7.4:41654738-41654757 None:intergenic 35.0%
ACTCAAATTGCACGATTAGT+AGG + chr7.4:41653738-41653757 MS.gene055272:intron 35.0%
AGAAAGTGAAGAGTTTACCT+AGG - chr7.4:41653315-41653334 None:intergenic 35.0%
CAAAAGCTACTACTAGCATT+GGG - chr7.4:41654612-41654631 None:intergenic 35.0%
CAATACACGTGCAAGTATTT+AGG - chr7.4:41654001-41654020 None:intergenic 35.0%
CACATTTCCACATAACATCT+GGG - chr7.4:41654737-41654756 None:intergenic 35.0%
CATGAACTTCACTTGCTTTA+TGG - chr7.4:41655288-41655307 None:intergenic 35.0%
GAACAAACAGGAGTTACTAT+AGG + chr7.4:41655065-41655084 MS.gene055272:intron 35.0%
GAAGAGTTTACCTAGGATTT+GGG - chr7.4:41653308-41653327 None:intergenic 35.0%
GATACGGTCCAAGAAAATTT+CGG + chr7.4:41655394-41655413 MS.gene055272:CDS 35.0%
GATGAAAGACAAGCATTTAG+AGG + chr7.4:41653659-41653678 MS.gene055272:intron 35.0%
GATTGTCCCACTATGAAATA+AGG - chr7.4:41655196-41655215 None:intergenic 35.0%
GTCATCGTGACATTAAATCT+GGG + chr7.4:41654658-41654677 MS.gene055272:intron 35.0%
TGAAGAGTTTACCTAGGATT+TGG - chr7.4:41653309-41653328 None:intergenic 35.0%
TGTCATCGTGACATTAAATC+TGG + chr7.4:41654657-41654676 MS.gene055272:intron 35.0%
TGTGTACGGTCCAATAAAAT+GGG - chr7.4:41655373-41655392 None:intergenic 35.0%
TTCACTTGCTTTATGGTCTT+GGG - chr7.4:41655281-41655300 None:intergenic 35.0%
TTGTGTACGGTCCAATAAAA+TGG - chr7.4:41655374-41655393 None:intergenic 35.0%
! ACTGTACGATAGTCAGTTTT+AGG - chr7.4:41654194-41654213 None:intergenic 35.0%
! CAGTTAGGAATGAGCATTTT+TGG - chr7.4:41654355-41654374 None:intergenic 35.0%
! GCTTTTGTACGGAAAATACT+TGG + chr7.4:41654625-41654644 MS.gene055272:intron 35.0%
! TGCTAGTAGTAGCTTTTGTA+CGG + chr7.4:41654614-41654633 MS.gene055272:intron 35.0%
! TTTTATGCCATGGAACAAAC+AGG + chr7.4:41655053-41655072 MS.gene055272:intron 35.0%
!! AAGTGATTATGAGAGTGTCA+GGG - chr7.4:41655144-41655163 None:intergenic 35.0%
!! GCATTAACAGGATTGGTTTA+AGG - chr7.4:41653395-41653414 None:intergenic 35.0%
!! TAAGTGATTATGAGAGTGTC+AGG - chr7.4:41655145-41655164 None:intergenic 35.0%
!!! AAGCAGCATTTTTTAGAAGC+TGG - chr7.4:41654307-41654326 None:intergenic 35.0%
!!! AGGAATGAGCATTTTTGGTT+GGG - chr7.4:41654350-41654369 None:intergenic 35.0%
!!! AGTCAGTTTTAGGTGATTGA+AGG - chr7.4:41654184-41654203 None:intergenic 35.0%
!!! CAAATGTTTTGGCAATGGAT+TGG + chr7.4:41653230-41653249 MS.gene055272:CDS 35.0%
!!! GGGTTTTTTTTTCGGAAGTT+TGG + chr7.4:41654466-41654485 MS.gene055272:intron 35.0%
!!! TAGGAATGAGCATTTTTGGT+TGG - chr7.4:41654351-41654370 None:intergenic 35.0%
AAGGATAAGCAAAGTGCAAG+TGG - chr7.4:41655177-41655196 None:intergenic 40.0%
ACTTCAGATACTCTCTCATG+TGG - chr7.4:41652890-41652909 None:intergenic 40.0%
AGAAGGGTTGCTTGAAGATA+TGG + chr7.4:41655420-41655439 MS.gene055272:CDS 40.0%
AGGATTTGGGCTATTCTTGA+TGG - chr7.4:41653295-41653314 None:intergenic 40.0%
AGTAACTCCTGTTTGTTCCA+TGG - chr7.4:41655063-41655082 None:intergenic 40.0%
ATGTGGAAATGTGTGTTGTG+TGG + chr7.4:41654744-41654763 MS.gene055272:intron 40.0%
ATTAAATCTGGGCCACACAA+AGG + chr7.4:41654669-41654688 MS.gene055272:intron 40.0%
ATTGGACCGTACACAAGATA+CGG + chr7.4:41655378-41655397 MS.gene055272:CDS 40.0%
CAAGAAAATTTCGGCTCAGA+AGG + chr7.4:41655403-41655422 MS.gene055272:CDS 40.0%
CACAACACATACAACACATC+TGG - chr7.4:41654711-41654730 None:intergenic 40.0%
CTTCACTTGCTTTATGGTCT+TGG - chr7.4:41655282-41655301 None:intergenic 40.0%
GATGTGTTGTATGTGTTGTG+TGG + chr7.4:41654711-41654730 MS.gene055272:intron 40.0%
GGTCCTTAGGTACACATTAA+TGG - chr7.4:41654591-41654610 None:intergenic 40.0%
GTAGGGTTTCTAACCATGAA+TGG - chr7.4:41655448-41655467 None:intergenic 40.0%
GTCACCGTGACATTAAATCT+GGG - chr7.4:41654770-41654789 None:intergenic 40.0%
TCAAGAATAGCCCAAATCCT+AGG + chr7.4:41653295-41653314 MS.gene055272:CDS 40.0%
TCATGTGGCAACATAAGAAG+AGG - chr7.4:41652875-41652894 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr7.4:41654771-41654790 None:intergenic 40.0%
! CTTCTGAGCCGAAATTTTCT+TGG - chr7.4:41655405-41655424 None:intergenic 40.0%
!! GATTGGGTGATGATGGATAT+AGG + chr7.4:41653247-41653266 MS.gene055272:CDS 40.0%
!! TGAAGATATGGTGCCATTCA+TGG + chr7.4:41655432-41655451 MS.gene055272:CDS 40.0%
!!! GTCACGCAGGGTTTTTTTTT+CGG + chr7.4:41654458-41654477 MS.gene055272:intron 40.0%
AACGTGAGTTAACTCACGCA+GGG - chr7.4:41654391-41654410 None:intergenic 45.0%
ACCTTGCCTAGTGAATCCTT+TGG + chr7.4:41654544-41654563 MS.gene055272:intron 45.0%
CACAACACAACACCTTTGTG+TGG - chr7.4:41654684-41654703 None:intergenic 45.0%
CCTTGCCTAGTGAATCCTTT+GGG + chr7.4:41654545-41654564 MS.gene055272:intron 45.0%
CTTGGACCGTATCTTGTGTA+CGG - chr7.4:41655387-41655406 None:intergenic 45.0%
GGATATAGGTGGAGGAAGTA+TGG + chr7.4:41653261-41653280 MS.gene055272:CDS 45.0%
GTAAGCCGTTTGGTTGAGAT+CGG + chr7.4:41653920-41653939 MS.gene055272:intron 45.0%
GTCATCCGATCTCAACCAAA+CGG - chr7.4:41653928-41653947 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr7.4:41654763-41654782 MS.gene055272:intron 45.0%
TAACGTGAGTTAACTCACGC+AGG - chr7.4:41654392-41654411 None:intergenic 45.0%
TCCACCAATGAAGAAGTCCA+AGG + chr7.4:41655234-41655253 MS.gene055272:CDS 45.0%
TGGACTTCTTCATTGGTGGA+TGG - chr7.4:41655234-41655253 None:intergenic 45.0%
! ACTACTAGCATTGGGTCCTT+AGG - chr7.4:41654604-41654623 None:intergenic 45.0%
! CCTAGTGAATCCTTTGGGTT+GGG + chr7.4:41654550-41654569 MS.gene055272:intron 45.0%
! CTTGCTTTATGGTCTTGGGT+TGG - chr7.4:41655277-41655296 None:intergenic 45.0%
! GGACTTCTTCATTGGTGGAT+GGG - chr7.4:41655233-41655252 None:intergenic 45.0%
! GTAGCCTTGGACTTCTTCAT+TGG - chr7.4:41655241-41655260 None:intergenic 45.0%
!! CACAAAGGTGTTGTGTTGTG+TGG + chr7.4:41654684-41654703 MS.gene055272:intron 45.0%
!! GTACAAAAGGGGAAGCACTT+GGG - chr7.4:41654802-41654821 None:intergenic 45.0%
!! GTGATGATGGATATAGGTGG+AGG + chr7.4:41653253-41653272 MS.gene055272:CDS 45.0%
!! TCAATTTTGGCCCAACCCAA+AGG - chr7.4:41654563-41654582 None:intergenic 45.0%
!! TGGCAGCGAGCATTTTAAGT+TGG + chr7.4:41654490-41654509 MS.gene055272:intron 45.0%
!! TGGGTGATGATGGATATAGG+TGG + chr7.4:41653250-41653269 MS.gene055272:CDS 45.0%
!! TGTACAAAAGGGGAAGCACT+TGG - chr7.4:41654803-41654822 None:intergenic 45.0%
!!! GGCAGCGAGCATTTTAAGTT+GGG + chr7.4:41654491-41654510 MS.gene055272:intron 45.0%
ACTATAGGTGCACCAACCCA+AGG + chr7.4:41655080-41655099 MS.gene055272:CDS 50.0%
AGGATTCACTAGGCAAGGTG+AGG - chr7.4:41654543-41654562 None:intergenic 50.0%
CCCAAAGGATTCACTAGGCA+AGG - chr7.4:41654548-41654567 None:intergenic 50.0%
CCCAACCCAAAGGATTCACT+AGG - chr7.4:41654553-41654572 None:intergenic 50.0%
CTGCGTGAGTTAACTCACGT+AGG + chr7.4:41654390-41654409 MS.gene055272:intron 50.0%
GCCTAGTGAATCCTTTGGGT+TGG + chr7.4:41654549-41654568 MS.gene055272:intron 50.0%
GCCTTGGACTTCTTCATTGG+TGG - chr7.4:41655238-41655257 None:intergenic 50.0%
GCTTCTTAGCACCACACCTT+GGG - chr7.4:41655099-41655118 None:intergenic 50.0%
GGATTCACTAGGCAAGGTGA+GGG - chr7.4:41654542-41654561 None:intergenic 50.0%
TCCAAGGCTACCTCTTCACA+AGG + chr7.4:41655250-41655269 MS.gene055272:CDS 50.0%
TCCTTGTGAAGAGGTAGCCT+TGG - chr7.4:41655254-41655273 None:intergenic 50.0%
TGCGTGACTTAAGTCACGCA+GGG + chr7.4:41654446-41654465 MS.gene055272:intron 50.0%
TGCTTCTTAGCACCACACCT+TGG - chr7.4:41655100-41655119 None:intergenic 50.0%
TGTGTGGCCCAGATGTTATG+TGG + chr7.4:41654727-41654746 MS.gene055272:intron 50.0%
TTGCGTGACTTAAGTCACGC+AGG + chr7.4:41654445-41654464 MS.gene055272:intron 50.0%
! AAGGTGTGGTGCTAAGAAGC+AGG + chr7.4:41655099-41655118 MS.gene055272:CDS 50.0%
! AGGAGAAAGGTGTGAGGAGA+AGG - chr7.4:41655506-41655525 None:intergenic 50.0%
!! GAGAGTGTCAGGGTCTTCAT+TGG - chr7.4:41655134-41655153 None:intergenic 50.0%
!! GGCAATGGATTGGGTGATGA+TGG + chr7.4:41653240-41653259 MS.gene055272:CDS 50.0%
!! TTGGGTTGGTCCTTGTGAAG+AGG - chr7.4:41655263-41655282 None:intergenic 50.0%
CTTAGCACCACACCTTGGGT+TGG - chr7.4:41655095-41655114 None:intergenic 55.0%
! TGCTGGAGGAGAAAGGTGTG+AGG - chr7.4:41655512-41655531 None:intergenic 55.0%
AGGTGCACCAACCCAAGGTG+TGG + chr7.4:41655085-41655104 MS.gene055272:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 41652800 41655534 41652800 ID=MS.gene055272
chr7.4 mRNA 41652800 41655534 41652800 ID=MS.gene055272.t1;Parent=MS.gene055272
chr7.4 exon 41652800 41653056 41652800 ID=MS.gene055272.t1.exon1;Parent=MS.gene055272.t1
chr7.4 CDS 41652800 41653056 41652800 ID=cds.MS.gene055272.t1;Parent=MS.gene055272.t1
chr7.4 exon 41653173 41653316 41653173 ID=MS.gene055272.t1.exon2;Parent=MS.gene055272.t1
chr7.4 CDS 41653173 41653316 41653173 ID=cds.MS.gene055272.t1;Parent=MS.gene055272.t1
chr7.4 exon 41655075 41655534 41655075 ID=MS.gene055272.t1.exon3;Parent=MS.gene055272.t1
chr7.4 CDS 41655075 41655534 41655075 ID=cds.MS.gene055272.t1;Parent=MS.gene055272.t1
Gene Sequence

>MS.gene055272

ATGGAGAAAATAATTTCTTGTAATTGGTCAGAGGATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTCCTCTTCTTATGTTGCCACATGAGAGAGTATCTGAAGTAACCAACTTAAGTCATGATTCTTCAAAAGACCAAGCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAATTTTCATCAACAAGGTAAGAGTACTTCAACATTTTTTTGTTAACTTGCATGGTAATTTTATTAGGTTTAGTTGCATGAATTGGACCAACTTATTTGATGTGTCTAATTGTGTTTCATATTTTCATTTCAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGTTTTGGCAATGGATTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGTAAACTCTTCACTTTCTTTTACATGTAATGTAATTGTCTTACTCATTTACTTGTGAAAAAAGATTTAGATATTTCCTTAAACCAATCCTGTTAATGCATATATATAGTACTTTGGCAATAGTTTTAAATATCCTTCTCAAACAAAACTGATTTAAATACAACTTCAATAGATTAATGAAATACATACAACTATATTTACTCACCTATAAAATTGATAGTGTCTAGAAAATTTAGAGCAAAACTTAATCATGTTGTAGACATGTCACAAGTTATATTTATAAAATCTCATAAATGAATTTGAATTTGTTGTAGTAGTAAAAGACCAAAATTGAAGCATTATTGATGAAAGACAAGCATTTAGAGGTTGAACTTTGAGTGATATTTTATCATATCAAAATATAAGTCGATCGAGATCAAACAACTCAAATTGCACGATTAGTAGGTTTATGCAACTACACATGATTAATGTCCTTCTAAAATACTTACAAGTGCTCATAATATAAATCCTTATAAATTTTATACGATGTTACTTGTTTGATCTCAATCAAACGACTAACATTTTTTAGGATTAAATTTTCAACCTCATTTTGTTATCTTAAAATGTAAGCCGTTTGGTTGAGATCGGATGACTCAAATCCCACAAGTAGTAAATTTTTCCAATGTTGACATTCCAAATCTTTCCTAAATACTTGCACGTGTATTGTTAGTAAGATTTTCAAAAAAGAGTTAAAATTCTAAGGCTTCTTTACCATAACATGTATCAACTCAACTAATCCTTTAAATAATCATTCATTCTCTTCGAACCGACTATATGATTAATGAGTAAGCCCCACACTTTTATAGTTGAATATCAATTGGAAAAACCTTCAATCACCTAAAACTGACTATCGTACAGTTGCATATCAAATTCAATTACCTAAAATATTCAACTATTTATCAAAACCTTGCAAGTTTCAAATTTTATAGTGGCAAAAGCAAGCATTAAACCAGCTTCTAAAAAATGCTGCTTAAAAGGAATTATGCTCTTTACCCAACCAAAAATGCTCATTCCTAACTGAATGACTATAATACCCTGCGTGAGTTAACTCACGTTAGTTATAAATTCTGCGTGAGTTAACTCACGTAGGTTGCGTGACTTAAGTCACGCAGGGTTTTTTTTTCGGAAGTTTGGTTGGCAGCGAGCATTTTAAGTTGGGTAAAGAGCAGAATTAGCTTAAAAGGCCCTCACCTTGCCTAGTGAATCCTTTGGGTTGGGCCAAAATTGACAATTCCATTAATGTGTACCTAAGGACCCAATGCTAGTAGTAGCTTTTGTACGGAAAATACTTGGGTGACATAATGTCATCGTGACATTAAATCTGGGCCACACAAAGGTGTTGTGTTGTGTGGCCCAGATGTGTTGTATGTGTTGTGTGGCCCAGATGTTATGTGGAAATGTGTGTTGTGTGGCCCAGATTTAATGTCACGGTGACATTATGTCACCCAAGTGCTTCCCCTTTTGTACATACCCTTAAAAATAAAAGTGCAAAATGAATCAATGAGTTATACATACAAAAGGGTAATAAAAATTTATCCACCATAGTATGATTGGTTTAAAAAATAATTTATATTTACATTTTCTGATTGTTTTAACTTTTTAATATACAAAAAAGTGAAGACAATGATTCAAAGTTGCCCTTAGCTAATTTGAGAAGATTAATTTCACAATTCAAAATTTAATTTTTCATCACAAATTTTTTATGCCATGGAACAAACAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGACAATCACATCAATCTCATTCCCATCCACCAATGAAGAAGTCCAAGGCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGGTCAGAATATACAAGAAGTCCATGAAACCCAATCTAGTAATTCTTTGGAACTCATTTCACCCATTTTATTGGACCGTACACAAGATACGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGAAACCCTACAAACAATGTTGATAGTGATGATTACTCAAAATTTTCCTTCTCCTCACACCTTTCTCCTCCAGCATAA
Protein sequence

>MS.gene055272.t1

MEKIISCNWSEDDELLRELLVDESPLLMLPHERVSEVTNLSHDSSKDQAFNRFISNIYSGPTISDIENALLVTNHSNQFQQFSSTRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSHSHPPMKKSKATSSQGPTQDHKASEVHEGQNIQEVHETQSSNSLELISPILLDRTQDTVQENFGSEGLLEDMVPFMVRNPTNNVDSDDYSKFSFSSHLSPPA