AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055278

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055278.t1 MTR_7g062120 95.989 698 28 0 1 698 45 742 0.0 1372
MS.gene055278.t1 MTR_4g064160 48.613 685 325 8 16 695 21 683 0.0 616
MS.gene055278.t1 MTR_2g097410 45.291 722 328 17 9 695 51 740 0.0 560
MS.gene055278.t1 MTR_4g064150 45.455 693 328 16 15 695 78 732 0.0 543
MS.gene055278.t1 MTR_2g097467 43.924 683 297 12 24 695 46 653 0.0 542
MS.gene055278.t1 MTR_2g097473 44.477 679 299 14 24 695 46 653 0.0 534
MS.gene055278.t1 MTR_2g097463 44.122 689 298 18 19 695 41 654 0.0 531
MS.gene055278.t1 MTR_4g064120 44.100 678 295 17 22 694 26 624 0.0 529
MS.gene055278.t1 MTR_4g064180 43.215 678 301 16 22 694 26 624 2.37e-176 518
MS.gene055278.t1 MTR_4g064200 52.242 513 229 7 193 695 143 649 4.37e-176 518
MS.gene055278.t1 MTR_2g097310 51.208 414 191 5 289 695 228 637 9.18e-153 457
MS.gene055278.t1 MTR_2g097350 51.202 416 192 5 287 695 228 639 6.13e-150 450
MS.gene055278.t1 MTR_2g097390 50.721 416 194 5 287 695 229 640 1.65e-147 444
MS.gene055278.t1 MTR_2g097380 49.176 364 152 4 333 695 229 560 1.19e-125 385
MS.gene055278.t1 MTR_5g097480 32.976 373 249 1 324 696 173 544 2.09e-66 228
MS.gene055278.t1 MTR_4g133660 30.481 374 258 2 323 695 170 542 4.03e-60 211
MS.gene055278.t1 MTR_2g026250 29.867 375 261 2 323 696 223 596 5.11e-60 213
MS.gene055278.t1 MTR_1g029420 31.806 371 252 1 326 696 223 592 5.41e-60 212
MS.gene055278.t1 MTR_3g056110 30.053 376 256 4 324 696 171 542 3.89e-59 209
MS.gene055278.t1 MTR_7g027190 29.895 475 285 10 239 696 230 673 1.43e-58 210
MS.gene055278.t1 MTR_2g082090 30.645 372 257 1 324 695 208 578 2.04e-58 207
MS.gene055278.t1 MTR_5g094450 29.949 394 262 7 313 696 143 532 4.74e-57 202
MS.gene055278.t1 MTR_3g089055 29.919 371 259 1 326 696 201 570 5.68e-56 201
MS.gene055278.t1 MTR_3g089055 29.919 371 259 1 326 696 196 565 7.50e-56 200
MS.gene055278.t1 MTR_4g104020 29.610 385 248 6 325 696 146 520 3.89e-50 183
MS.gene055278.t1 MTR_3g065980 30.789 393 236 8 323 697 167 541 2.54e-48 179
MS.gene055278.t1 MTR_7g074650 30.137 365 241 5 332 696 442 792 2.44e-47 179
MS.gene055278.t1 MTR_8g442410 30.326 399 244 8 318 698 145 527 3.88e-47 175
MS.gene055278.t1 MTR_4g076140 26.636 428 249 4 328 696 48 469 3.47e-45 168
MS.gene055278.t1 MTR_3g022830 27.208 419 248 6 329 697 26 437 1.83e-41 157
MS.gene055278.t1 MTR_2g034260 28.244 393 260 10 319 697 201 585 8.63e-38 149
MS.gene055278.t1 MTR_2g089100 28.501 407 242 10 325 695 49 442 2.21e-37 145
MS.gene055278.t1 MTR_4g076020 27.926 376 226 9 332 696 88 429 2.49e-36 142
MS.gene055278.t1 MTR_2g034250 26.835 395 264 9 319 697 201 586 4.72e-36 144
MS.gene055278.t1 MTR_4g102790 25.065 383 267 7 324 695 288 661 1.51e-35 143
MS.gene055278.t1 MTR_7g109580 29.487 390 242 10 323 697 184 555 1.56e-35 142
MS.gene055278.t1 MTR_1g069725 27.512 418 263 14 298 695 65 462 2.12e-35 140
MS.gene055278.t1 MTR_4g097080 26.316 380 264 8 326 696 131 503 3.06e-35 140
MS.gene055278.t1 MTR_1g096030 28.141 398 239 14 328 696 80 459 4.79e-34 136
MS.gene055278.t1 MTR_2g034280 25.831 391 270 8 319 697 194 576 2.65e-32 132
MS.gene055278.t1 MTR_1g086970 26.598 391 259 13 323 697 101 479 1.28e-31 129
MS.gene055278.t1 MTR_4g077760 26.836 354 241 8 347 696 216 555 2.37e-31 129
MS.gene055278.t1 MTR_5g015490 26.302 384 261 6 328 696 114 490 2.85e-31 128
MS.gene055278.t1 MTR_3g072710 27.688 372 229 10 347 695 145 499 2.72e-27 116
MS.gene055278.t1 MTR_7g057230 25.326 383 249 10 329 695 295 656 7.74e-27 116
MS.gene055278.t1 MTR_5g009080 31.019 216 139 3 328 539 56 265 5.25e-26 112
MS.gene055278.t1 MTR_5g009080 29.252 147 104 0 550 696 332 478 6.50e-17 84.7
MS.gene055278.t1 MTR_6g047750 24.346 382 260 11 329 696 296 662 3.51e-24 108
MS.gene055278.t1 MTR_5g058860 24.750 400 255 12 325 695 114 496 5.23e-24 106
MS.gene055278.t1 MTR_2g099110 28.000 300 202 5 328 622 74 364 1.28e-23 105
MS.gene055278.t1 MTR_5g015950 21.823 417 277 8 325 695 32 445 9.94e-23 102
MS.gene055278.t1 MTR_3g053270 21.823 417 277 8 325 695 32 445 9.94e-23 102
MS.gene055278.t1 MTR_4g095500 23.981 417 266 10 325 695 56 467 2.71e-22 101
MS.gene055278.t1 MTR_8g093070 25.693 397 250 16 316 695 127 495 5.87e-22 100
MS.gene055278.t1 MTR_8g020840 24.499 449 283 15 276 697 130 549 3.31e-19 92.0
MS.gene055278.t1 MTR_0092s0100 22.751 378 260 6 329 696 373 728 3.15e-17 86.3
MS.gene055278.t1 MTR_0092s0100 22.751 378 260 6 329 696 376 731 3.28e-17 86.3
MS.gene055278.t1 MTR_4g026485 21.463 410 272 11 304 696 248 624 6.50e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055278.t1 AT2G37650 52.339 684 272 11 24 696 73 713 0.0 658
MS.gene055278.t1 AT2G37650 52.339 684 272 11 24 696 61 701 0.0 657
MS.gene055278.t1 AT1G07530 47.971 690 322 12 32 695 86 764 0.0 600
MS.gene055278.t1 AT2G29060 45.748 682 279 14 25 695 53 654 0.0 561
MS.gene055278.t1 AT2G29060 44.985 678 327 9 25 695 53 691 0.0 561
MS.gene055278.t1 AT2G29065 42.353 680 293 14 29 695 34 627 5.25e-159 473
MS.gene055278.t1 AT1G07520 40.000 715 335 16 8 695 46 693 6.52e-157 470
MS.gene055278.t1 AT1G07520 40.000 715 335 16 8 695 45 692 1.29e-156 469
MS.gene055278.t1 AT1G07520 45.917 551 251 12 159 695 11 528 1.17e-152 453
MS.gene055278.t1 AT1G07520 45.917 551 251 12 159 695 11 528 1.17e-152 453
MS.gene055278.t1 AT5G59450 46.934 473 238 5 231 698 136 600 6.30e-152 454
MS.gene055278.t1 AT3G46600 51.629 399 190 2 302 698 152 549 8.83e-142 426
MS.gene055278.t1 AT3G46600 51.629 399 190 2 302 698 184 581 9.66e-142 427
MS.gene055278.t1 AT3G46600 52.941 374 175 1 325 698 1 373 4.18e-140 415
MS.gene055278.t1 AT4G17230 33.690 374 247 1 323 696 153 525 1.31e-63 221
MS.gene055278.t1 AT4G17230 33.690 374 247 1 323 696 153 525 1.31e-63 221
MS.gene055278.t1 AT5G48150 31.818 374 253 2 324 696 118 490 1.86e-63 219
MS.gene055278.t1 AT5G48150 31.818 374 253 2 324 696 118 490 1.86e-63 219
MS.gene055278.t1 AT5G48150 31.818 374 253 2 324 696 118 490 1.86e-63 219
MS.gene055278.t1 AT5G48150 31.818 374 253 2 324 696 118 490 1.86e-63 219
MS.gene055278.t1 AT1G50600 32.976 373 249 1 324 696 155 526 1.87e-63 220
MS.gene055278.t1 AT1G50600 32.976 373 249 1 324 696 226 597 9.90e-63 220
MS.gene055278.t1 AT1G50600 32.976 373 249 1 324 696 230 601 1.34e-62 219
MS.gene055278.t1 AT2G04890 31.099 373 249 2 324 696 49 413 2.95e-61 211
MS.gene055278.t1 AT1G21450 29.765 383 260 4 320 696 214 593 1.96e-54 197
MS.gene055278.t1 AT3G03450 31.854 383 229 9 329 698 184 547 1.85e-50 185
MS.gene055278.t1 AT1G14920 33.081 396 226 12 315 698 163 531 2.32e-50 184
MS.gene055278.t1 AT3G54220 30.097 412 268 7 290 695 252 649 2.53e-48 181
MS.gene055278.t1 AT1G66350 32.527 372 228 10 329 697 156 507 1.68e-47 176
MS.gene055278.t1 AT2G01570 31.726 394 234 13 315 698 215 583 1.68e-47 177
MS.gene055278.t1 AT5G17490 30.000 390 233 10 323 698 155 518 1.14e-45 171
MS.gene055278.t1 AT1G50420 25.175 429 255 5 328 696 57 479 2.06e-43 164
MS.gene055278.t1 AT5G66770 27.493 371 253 8 332 696 224 584 6.63e-41 158
MS.gene055278.t1 AT5G41920 28.462 390 250 9 316 696 31 400 4.86e-37 144
MS.gene055278.t1 AT4G37650 25.320 391 265 8 327 696 145 529 4.01e-35 140
MS.gene055278.t1 AT3G50650 25.070 359 252 5 346 696 193 542 7.17e-33 134
MS.gene055278.t1 AT5G52510 24.870 386 264 7 326 696 266 640 1.44e-32 134
MS.gene055278.t1 AT1G63100 26.911 327 227 5 324 646 273 591 3.50e-31 130
MS.gene055278.t1 AT1G63100 26.409 337 236 5 324 656 248 576 3.57e-31 130
MS.gene055278.t1 AT1G55580 25.121 414 259 9 325 696 41 445 5.00e-27 115
MS.gene055278.t1 AT3G49950 26.667 390 258 10 325 695 27 407 7.85e-24 105
MS.gene055278.t1 AT4G08250 25.128 390 258 11 325 695 102 476 2.18e-21 98.6
MS.gene055278.t1 AT3G13840 25.000 416 268 14 300 696 120 510 4.52e-19 91.7

Find 143 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTAGTCCTTTATAAATT+TGG 0.135271 7.4:+41741421 None:intergenic
CTTTCTTTGTTACTCGATTT+AGG 0.193366 7.4:-41740849 MS.gene055278:CDS
ACCTTGCAGCTTGCCCTTTC+CGG 0.197040 7.4:-41741353 MS.gene055278:CDS
GTTTCCGCGCAAAGAATTAT+TGG 0.201496 7.4:+41742226 None:intergenic
CTAATTGAGAAAGAGATATT+TGG 0.206202 7.4:-41740751 MS.gene055278:CDS
TTCATTCACGGCATTGTTAA+TGG 0.209614 7.4:-41740886 MS.gene055278:CDS
ACTTTCCACAACCTGGTTTC+AGG 0.237189 7.4:-41741161 MS.gene055278:CDS
TTTCTTTGTTACTCGATTTA+GGG 0.239290 7.4:-41740848 MS.gene055278:CDS
AACAAAGAAAGGAGCATTAA+AGG 0.262853 7.4:+41740861 None:intergenic
ATAGACTTTGGTATCCTCTA+TGG 0.301006 7.4:-41741261 MS.gene055278:CDS
ACGTTCCTGCTTCATAGTTT+AGG 0.305136 7.4:-41741762 MS.gene055278:CDS
CATCCTTATGGAAGAAGATA+TGG 0.310452 7.4:-41742453 MS.gene055278:CDS
GCTAATAAGTTTCTCCCTAA+TGG 0.314940 7.4:-41742014 MS.gene055278:CDS
GAAAGAGGCCATTTCCATTA+GGG 0.330219 7.4:+41742000 None:intergenic
AGACAGCACTCAAACCCTTT+TGG 0.339731 7.4:-41741513 MS.gene055278:CDS
CGATGGCCTTGAGGCACGTT+TGG 0.343289 7.4:-41741457 MS.gene055278:CDS
TGAAAGAGGCCATTTCCATT+AGG 0.351396 7.4:+41741999 None:intergenic
GAAGCTCAATTTCCTCATAA+TGG 0.356048 7.4:-41742197 MS.gene055278:CDS
ATGCCGTGAATGAATATATT+CGG 0.368145 7.4:+41740895 None:intergenic
TTACCGTGGTAGAAACTTGC+TGG 0.375708 7.4:-41740980 MS.gene055278:CDS
TTACATCAATAACATCCTTA+TGG 0.377855 7.4:-41742465 MS.gene055278:CDS
TATCGTGCCTCGCGAGGATT+GGG 0.380868 7.4:-41740782 MS.gene055278:CDS
CTTCCATATCTTCTTCCATA+AGG 0.384242 7.4:+41742450 None:intergenic
AAGTACCCGGTTTCGCCGTT+AGG 0.384939 7.4:-41742353 MS.gene055278:CDS
CAAATTCGTATTCTTCGAGC+TGG 0.390469 7.4:-41740655 MS.gene055278:CDS
TTTCCTTGAAAACCATTATG+AGG 0.391556 7.4:+41742185 None:intergenic
GGCCTTGAGGCACGTTTGGC+TGG 0.393996 7.4:-41741453 MS.gene055278:CDS
ACAGGAAGCCAAATTTATAA+AGG 0.398179 7.4:-41741429 MS.gene055278:CDS
TAATTGAGAAAGAGATATTT+GGG 0.399383 7.4:-41740750 MS.gene055278:CDS
CGAAGTTTCGGCGGTCCTCC+TGG 0.408211 7.4:+41741198 None:intergenic
TTTGTTGCGTTCAACTATGA+TGG 0.408586 7.4:-41741787 MS.gene055278:CDS
TCGTTTACGCACTTTCTTGT+TGG 0.408613 7.4:-41740504 MS.gene055278:CDS
AGACAAAACTAGTCATCTTC+CGG 0.409694 7.4:+41741334 None:intergenic
CGCTGATTTCCATCTCCAAA+AGG 0.411695 7.4:+41741498 None:intergenic
GTTTCACTACTAAGACTTTG+AGG 0.420199 7.4:+41742326 None:intergenic
GTGTGGATGCTTCCTTCCCT+TGG 0.423324 7.4:+41741872 None:intergenic
ATTCCTGTGATCCGAAGTTT+CGG 0.426274 7.4:+41741186 None:intergenic
AAGTTTCTCCCTAATGGAAA+TGG 0.436441 7.4:-41742008 MS.gene055278:CDS
CAATCTTGAGTTCCTCAAGC+TGG 0.440153 7.4:+41741034 None:intergenic
GCTATGGCATTATACTCAAA+TGG 0.441312 7.4:+41741075 None:intergenic
CTCTCTGCGGGCCTGAAACC+AGG 0.442486 7.4:+41741150 None:intergenic
GTATCGTGCCTCGCGAGGAT+TGG 0.444992 7.4:-41740783 MS.gene055278:CDS
TAGAGAGGCCAGAGACATAT+CGG 0.445574 7.4:-41740684 MS.gene055278:CDS
TATAGAAACCGGTTCGCGCT+TGG 0.446581 7.4:-41741124 MS.gene055278:CDS
GAGGCACGTTTGGCTGGTAC+AGG 0.458499 7.4:-41741447 MS.gene055278:CDS
TTCTCCAGACAGTGATCTAC+AGG 0.458533 7.4:-41742096 MS.gene055278:CDS
AAAGAGCAGTGGAGAAAGTA+AGG 0.458900 7.4:-41740597 MS.gene055278:CDS
AGGGTCCATGTTATAGACTT+TGG 0.460977 7.4:-41741273 MS.gene055278:CDS
TTCTTTGCGCGGAAACTTGA+GGG 0.461428 7.4:-41742219 MS.gene055278:CDS
AAATCCTCAGTTTGATAAGA+AGG 0.464246 7.4:-41740924 MS.gene055278:CDS
AACTAGTCATCTTCCGGAAA+GGG 0.465913 7.4:+41741340 None:intergenic
ATACGCTGCCAAGCGCGAAC+CGG 0.466569 7.4:+41741116 None:intergenic
ATCGAGGTCGTTGTTGAAGA+AGG 0.474514 7.4:+41742545 None:intergenic
TGGTTATTACAAGGCTGGAA+AGG 0.474852 7.4:-41740532 MS.gene055278:CDS
TGCCACTGCCGATATGTCTC+TGG 0.476686 7.4:+41740676 None:intergenic
CTAAATCGAGTAACAAAGAA+AGG 0.477974 7.4:+41740850 None:intergenic
GTAGCTTTCGATGTATTACT+TGG 0.479635 7.4:+41741672 None:intergenic
CAGGAGGACCGCCGAAACTT+CGG 0.485753 7.4:-41741197 MS.gene055278:CDS
AAGTACCGTCGAAGGGACTC+TGG 0.494014 7.4:-41742120 MS.gene055278:CDS
GCAAGTGGTTATTACAAGGC+TGG 0.495209 7.4:-41740537 MS.gene055278:CDS
GAAAGTCTTTGTATGAAAGT+AGG 0.500451 7.4:+41741228 None:intergenic
CATCGAAAGCTACGACTAGT+AGG 0.501175 7.4:-41741662 MS.gene055278:CDS
AAACCGAATATATTCATTCA+CGG 0.501405 7.4:-41740898 MS.gene055278:CDS
GAACGATGAACTATCGGTTA+AGG 0.502118 7.4:-41741931 MS.gene055278:CDS
GTTGAAGAAGGTGTGCAATC+AGG 0.502708 7.4:+41742557 None:intergenic
TTTGTATGAAAGTAGGCCAT+TGG 0.503852 7.4:+41741235 None:intergenic
GTATCCTCTATGGTTTCCAA+TGG 0.508744 7.4:-41741251 MS.gene055278:CDS
GTTTCTATAATTCTCTCTGC+GGG 0.513528 7.4:+41741138 None:intergenic
ATTCTTTGCGCGGAAACTTG+AGG 0.514689 7.4:-41742220 MS.gene055278:CDS
GGTTATTACAAGGCTGGAAA+GGG 0.517720 7.4:-41740531 MS.gene055278:CDS
GCGGGCCTGAAACCAGGTTG+TGG 0.519647 7.4:+41741156 None:intergenic
GCAGAGAGAATTATAGAAAC+CGG 0.520739 7.4:-41741135 MS.gene055278:CDS
GCTGATTTCCATCTCCAAAA+GGG 0.524319 7.4:+41741499 None:intergenic
CATCTCCTAAACTATGAAGC+AGG 0.528029 7.4:+41741757 None:intergenic
CCGCCGAAACTTCGGATCAC+AGG 0.530115 7.4:-41741189 MS.gene055278:CDS
GAAACCTGTAGATCACTGTC+TGG 0.531985 7.4:+41742092 None:intergenic
GGAATAGACTTTCCACAACC+TGG 0.535328 7.4:-41741168 MS.gene055278:CDS
TGAGAAAGAGATATTTGGGA+AGG 0.540140 7.4:-41740746 MS.gene055278:CDS
TCAGAAAATTCACACTCCTC+AGG 0.542538 7.4:+41742500 None:intergenic
CTGTGGTAGTCGACAGTCCA+AGG 0.548946 7.4:-41740951 MS.gene055278:CDS
TATGGTACTTGTGTTGATGA+TGG 0.553757 7.4:-41742269 MS.gene055278:CDS
TTGGCTCATATATTTGCCGA+TGG 0.554111 7.4:-41741474 MS.gene055278:CDS
AAATTCGTATTCTTCGAGCT+GGG 0.554272 7.4:-41740654 MS.gene055278:CDS
AATTCACACTCCTCAGGAGA+AGG 0.554993 7.4:+41742506 None:intergenic
TGAAAGTATCGTGCCTCGCG+AGG 0.557299 7.4:-41740788 MS.gene055278:CDS
TGGAGATGGAAATCAGCGGT+TGG 0.560835 7.4:-41741493 MS.gene055278:CDS
CTTGAGTTCCTCAAGCTGGA+TGG 0.564439 7.4:+41741038 None:intergenic
AAGCTACGACTAGTAGGAAA+GGG 0.568799 7.4:-41741656 MS.gene055278:CDS
GGCCAGAGACATATCGGCAG+TGG 0.569068 7.4:-41740678 MS.gene055278:CDS
AGTGATGAACGATGAACTAT+CGG 0.570283 7.4:-41741937 MS.gene055278:CDS
TGTTCTTTGTGCACAAGCTG+TGG 0.571979 7.4:-41741580 MS.gene055278:CDS
AAACTAGTCATCTTCCGGAA+AGG 0.572499 7.4:+41741339 None:intergenic
TCCGGAAAGGGCAAGCTGCA+AGG 0.577684 7.4:+41741352 None:intergenic
TTCCTCATGTGTCGAAATCG+AGG 0.578452 7.4:+41742529 None:intergenic
CAAACGTGCCTCAAGGCCAT+CGG 0.583143 7.4:+41741458 None:intergenic
CTTTGTTACTCGATTTAGGG+AGG 0.585134 7.4:-41740845 MS.gene055278:CDS
TACCAGCCAAACGTGCCTCA+AGG 0.585310 7.4:+41741451 None:intergenic
ATGGACCCTCATTGAACTTG+CGG 0.586513 7.4:+41741287 None:intergenic
GCAATTTCAAAAGGGTGTTG+AGG 0.587105 7.4:-41742039 MS.gene055278:CDS
AGTTCATCGTTCATCACTCT+AGG 0.587295 7.4:+41741942 None:intergenic
CAAAGACTTTCATTACGACC+AGG 0.587494 7.4:-41741216 MS.gene055278:CDS
AACTACAGTAGAAAGAGCAG+TGG 0.587665 7.4:-41740608 MS.gene055278:CDS
ATTTCAAAAGGGTGTTGAGG+AGG 0.588136 7.4:-41742036 MS.gene055278:CDS
AGTTATAGGCGAAAAGTACC+CGG 0.589749 7.4:-41742366 MS.gene055278:CDS
AAAGCTACGACTAGTAGGAA+AGG 0.590220 7.4:-41741657 MS.gene055278:CDS
GATAGCAAGTGGTTATTACA+AGG 0.594251 7.4:-41740541 MS.gene055278:CDS
TTTACCAATAATTCTTTGCG+CGG 0.594670 7.4:-41742230 MS.gene055278:CDS
ATGGGACACCATCCAGCTTG+AGG 0.596627 7.4:-41741046 MS.gene055278:CDS
GGTTTCTATAATTCTCTCTG+CGG 0.601490 7.4:+41741137 None:intergenic
TGATCCTTCTTATCAAACTG+AGG 0.602637 7.4:+41740920 None:intergenic
TAGGCCATTGGAAACCATAG+AGG 0.604324 7.4:+41741247 None:intergenic
ATCATAGTTGAACGCAACAA+AGG 0.606015 7.4:+41741789 None:intergenic
AGTAGTGAAACTGATGGTGT+TGG 0.608255 7.4:-41742314 MS.gene055278:CDS
AAACTTGCTGGATGAATCTG+TGG 0.612156 7.4:-41740968 MS.gene055278:CDS
TTGAATGTTATAGCTTGTGA+AGG 0.613935 7.4:-41740718 MS.gene055278:CDS
CCTGTGATCCGAAGTTTCGG+CGG 0.615573 7.4:+41741189 None:intergenic
TTATCGACGAAGATAGCAAG+TGG 0.616473 7.4:-41740552 MS.gene055278:CDS
AATCTGCCGCAAGTTCAATG+AGG 0.619310 7.4:-41741293 MS.gene055278:CDS
ATCTGCCGCAAGTTCAATGA+GGG 0.620148 7.4:-41741292 MS.gene055278:CDS
AGTGTAAGAAGTACCGTCGA+AGG 0.622470 7.4:-41742128 MS.gene055278:CDS
TATATTTGCCGATGGCCTTG+AGG 0.628661 7.4:-41741466 MS.gene055278:CDS
TAAGGACGAGAAGGATGAGA+GGG 0.633129 7.4:-41741913 MS.gene055278:CDS
GTGTAAGAAGTACCGTCGAA+GGG 0.637907 7.4:-41742127 MS.gene055278:CDS
TGCCTCGCGAGGATTGGGAA+AGG 0.638817 7.4:-41740777 MS.gene055278:CDS
TTAAGGACGAGAAGGATGAG+AGG 0.641254 7.4:-41741914 MS.gene055278:CDS
ACGACTAGTAGGAAAGGGCG+AGG 0.643128 7.4:-41741651 MS.gene055278:CDS
CGTCGATAACAAAATCCTTG+TGG 0.649122 7.4:+41740566 None:intergenic
AGTCTTAGTAGTGAAACTGA+TGG 0.650092 7.4:-41742320 MS.gene055278:CDS
ACATGAGGAACCTTCTCCTG+AGG 0.651054 7.4:-41742516 MS.gene055278:CDS
ATCCTTTCCCAATCCTCGCG+AGG 0.655939 7.4:+41740775 None:intergenic
ACTATCGGTTAAGGACGAGA+AGG 0.656821 7.4:-41741922 MS.gene055278:CDS
TCTTTGTGCACAAGCTGTGG+CGG 0.664334 7.4:-41741577 MS.gene055278:CDS
GGATACCAAAGTCTATAACA+TGG 0.671335 7.4:+41741268 None:intergenic
AGAATCCAGAGTCCCTTCGA+CGG 0.675444 7.4:+41742115 None:intergenic
AAGGTTGTGAGAGAGTAGAG+AGG 0.678332 7.4:-41740699 MS.gene055278:CDS
AAGGGAAGGAAGCATCCACA+CGG 0.680283 7.4:-41741870 MS.gene055278:CDS
CATCCAGCAAGTTTCTACCA+CGG 0.681365 7.4:+41740977 None:intergenic
ATGTCTACTTCACCACCGTG+TGG 0.688705 7.4:+41741855 None:intergenic
GAAGAAGGTGTGCAATCAGG+TGG 0.695631 7.4:+41742560 None:intergenic
AGTAAGGTCTAGCTACCACA+AGG 0.698237 7.4:-41740581 MS.gene055278:CDS
GACCTCGATTTCGACACATG+AGG 0.702383 7.4:-41742531 MS.gene055278:CDS
AGACTTTCATTACGACCAGG+AGG 0.714994 7.4:-41741213 MS.gene055278:CDS
GGAAGGAAGCATCCACACGG+TGG 0.756816 7.4:-41741867 MS.gene055278:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTACTTTTTTGATAATTA+TGG - chr7.4:41740771-41740790 MS.gene055278:CDS 10.0%
!!! AAATCATTTTATGAAGTTAT+AGG - chr7.4:41740678-41740697 MS.gene055278:CDS 15.0%
!! TAATTGAGAAAGAGATATTT+GGG - chr7.4:41742308-41742327 MS.gene055278:CDS 20.0%
!!! TGATTAGTCCTTTATAAATT+TGG + chr7.4:41741640-41741659 None:intergenic 20.0%
! AAACCGAATATATTCATTCA+CGG - chr7.4:41742160-41742179 MS.gene055278:CDS 25.0%
! ATAATGCCATAGCAAAAAAA+TGG - chr7.4:41741993-41742012 MS.gene055278:CDS 25.0%
! CTAATTGAGAAAGAGATATT+TGG - chr7.4:41742307-41742326 MS.gene055278:CDS 25.0%
! TAAAAAACAAAACGGGAAAA+AGG - chr7.4:41741430-41741449 MS.gene055278:CDS 25.0%
! TAATGCCATAGCAAAAAAAT+GGG - chr7.4:41741994-41742013 MS.gene055278:CDS 25.0%
! TTACATCAATAACATCCTTA+TGG - chr7.4:41740593-41740612 MS.gene055278:CDS 25.0%
! TTTCTTTGTTACTCGATTTA+GGG - chr7.4:41742210-41742229 MS.gene055278:CDS 25.0%
!! ACCAATTTTGCAATTTCAAA+AGG - chr7.4:41741010-41741029 MS.gene055278:CDS 25.0%
!! CCAATTTTGCAATTTCAAAA+GGG - chr7.4:41741011-41741030 MS.gene055278:CDS 25.0%
!!! CAACATCAAAATTTTGAAAG+AGG + chr7.4:41741076-41741095 None:intergenic 25.0%
AAATCCTCAGTTTGATAAGA+AGG - chr7.4:41742134-41742153 MS.gene055278:CDS 30.0%
ACAGGAAGCCAAATTTATAA+AGG - chr7.4:41741629-41741648 MS.gene055278:CDS 30.0%
ATGCCGTGAATGAATATATT+CGG + chr7.4:41742166-41742185 None:intergenic 30.0%
CTAAATCGAGTAACAAAGAA+AGG + chr7.4:41742211-41742230 None:intergenic 30.0%
CTTTCTTTGTTACTCGATTT+AGG - chr7.4:41742209-41742228 MS.gene055278:CDS 30.0%
GAAAGTCTTTGTATGAAAGT+AGG + chr7.4:41741833-41741852 None:intergenic 30.0%
TTTACCAATAATTCTTTGCG+CGG - chr7.4:41740828-41740847 MS.gene055278:CDS 30.0%
TTTCCTTGAAAACCATTATG+AGG + chr7.4:41740876-41740895 None:intergenic 30.0%
! AAACTGAGGATTTTATTCCT+TGG + chr7.4:41742127-41742146 None:intergenic 30.0%
! AGAGGGATTCTTTTCTTTTT+GGG - chr7.4:41741162-41741181 MS.gene055278:CDS 30.0%
! TTGAATGTTATAGCTTGTGA+AGG - chr7.4:41742340-41742359 MS.gene055278:CDS 30.0%
! TTTCCTCATAATGGTTTTCA+AGG - chr7.4:41740870-41740889 MS.gene055278:CDS 30.0%
!! AACAAAGAAAGGAGCATTAA+AGG + chr7.4:41742200-41742219 None:intergenic 30.0%
!!! CCCTTTTGAAATTGCAAAAT+TGG + chr7.4:41741014-41741033 None:intergenic 30.0%
AAATTCGTATTCTTCGAGCT+GGG - chr7.4:41742404-41742423 MS.gene055278:CDS 35.0%
AAGTTTCTCCCTAATGGAAA+TGG - chr7.4:41741050-41741069 MS.gene055278:CDS 35.0%
AGACAAAACTAGTCATCTTC+CGG + chr7.4:41741727-41741746 None:intergenic 35.0%
AGTCTTAGTAGTGAAACTGA+TGG - chr7.4:41740738-41740757 MS.gene055278:CDS 35.0%
AGTGATGAACGATGAACTAT+CGG - chr7.4:41741121-41741140 MS.gene055278:CDS 35.0%
ATAGACTTTGGTATCCTCTA+TGG - chr7.4:41741797-41741816 MS.gene055278:CDS 35.0%
ATCATAGTTGAACGCAACAA+AGG + chr7.4:41741272-41741291 None:intergenic 35.0%
CATCCTTATGGAAGAAGATA+TGG - chr7.4:41740605-41740624 MS.gene055278:CDS 35.0%
CTTCCATATCTTCTTCCATA+AGG + chr7.4:41740611-41740630 None:intergenic 35.0%
GAAGCTCAATTTCCTCATAA+TGG - chr7.4:41740861-41740880 MS.gene055278:CDS 35.0%
GATAGCAAGTGGTTATTACA+AGG - chr7.4:41742517-41742536 MS.gene055278:CDS 35.0%
GCAGAGAGAATTATAGAAAC+CGG - chr7.4:41741923-41741942 MS.gene055278:CDS 35.0%
GCTAATAAGTTTCTCCCTAA+TGG - chr7.4:41741044-41741063 MS.gene055278:CDS 35.0%
GCTATGGCATTATACTCAAA+TGG + chr7.4:41741986-41742005 None:intergenic 35.0%
GGATACCAAAGTCTATAACA+TGG + chr7.4:41741793-41741812 None:intergenic 35.0%
GGTAAAAACAGGTAACAACT+AGG + chr7.4:41742063-41742082 None:intergenic 35.0%
GGTTTCTATAATTCTCTCTG+CGG + chr7.4:41741924-41741943 None:intergenic 35.0%
GTAGCTTTCGATGTATTACT+TGG + chr7.4:41741389-41741408 None:intergenic 35.0%
GTTTCACTACTAAGACTTTG+AGG + chr7.4:41740735-41740754 None:intergenic 35.0%
GTTTCTATAATTCTCTCTGC+GGG + chr7.4:41741923-41741942 None:intergenic 35.0%
TGAGAAAGAGATATTTGGGA+AGG - chr7.4:41742312-41742331 MS.gene055278:CDS 35.0%
TGATCCTTCTTATCAAACTG+AGG + chr7.4:41742141-41742160 None:intergenic 35.0%
TTCATTCACGGCATTGTTAA+TGG - chr7.4:41742172-41742191 MS.gene055278:CDS 35.0%
TTTGTATGAAAGTAGGCCAT+TGG + chr7.4:41741826-41741845 None:intergenic 35.0%
TTTGTTGCGTTCAACTATGA+TGG - chr7.4:41741271-41741290 MS.gene055278:CDS 35.0%
! AGATGCTAAGACGCATTTTA+CGG - chr7.4:41741319-41741338 MS.gene055278:CDS 35.0%
! GAGAGGGATTCTTTTCTTTT+TGG - chr7.4:41741161-41741180 MS.gene055278:CDS 35.0%
! TATGGTACTTGTGTTGATGA+TGG - chr7.4:41740789-41740808 MS.gene055278:CDS 35.0%
!!! AGACTTTGAGGTTTTCCTAA+CGG + chr7.4:41740723-41740742 None:intergenic 35.0%
!!! TCTTTTCTTTTTGGGTCCAA+GGG - chr7.4:41741170-41741189 MS.gene055278:CDS 35.0%
!!! TTCTTTTCTTTTTGGGTCCA+AGG - chr7.4:41741169-41741188 MS.gene055278:CDS 35.0%
AAACTAGTCATCTTCCGGAA+AGG + chr7.4:41741722-41741741 None:intergenic 40.0%
AAAGAGCAGTGGAGAAAGTA+AGG - chr7.4:41742461-41742480 MS.gene055278:CDS 40.0%
AAAGCTACGACTAGTAGGAA+AGG - chr7.4:41741401-41741420 MS.gene055278:CDS 40.0%
AACTACAGTAGAAAGAGCAG+TGG - chr7.4:41742450-41742469 MS.gene055278:CDS 40.0%
AACTAGTCATCTTCCGGAAA+GGG + chr7.4:41741721-41741740 None:intergenic 40.0%
AAGCTACGACTAGTAGGAAA+GGG - chr7.4:41741402-41741421 MS.gene055278:CDS 40.0%
ACGTTCCTGCTTCATAGTTT+AGG - chr7.4:41741296-41741315 MS.gene055278:CDS 40.0%
AGGGTCCATGTTATAGACTT+TGG - chr7.4:41741785-41741804 MS.gene055278:CDS 40.0%
AGTTCATCGTTCATCACTCT+AGG + chr7.4:41741119-41741138 None:intergenic 40.0%
ATTCCTGTGATCCGAAGTTT+CGG + chr7.4:41741875-41741894 None:intergenic 40.0%
CAAAGACTTTCATTACGACC+AGG - chr7.4:41741842-41741861 MS.gene055278:CDS 40.0%
CAAATTCGTATTCTTCGAGC+TGG - chr7.4:41742403-41742422 MS.gene055278:CDS 40.0%
CATCTCCTAAACTATGAAGC+AGG + chr7.4:41741304-41741323 None:intergenic 40.0%
CGTCGATAACAAAATCCTTG+TGG + chr7.4:41742495-41742514 None:intergenic 40.0%
CTTTGTTACTCGATTTAGGG+AGG - chr7.4:41742213-41742232 MS.gene055278:CDS 40.0%
GAAAGAGGCCATTTCCATTA+GGG + chr7.4:41741061-41741080 None:intergenic 40.0%
GGCGAGGTAAAAAACAAAAC+GGG - chr7.4:41741423-41741442 MS.gene055278:CDS 40.0%
GGGCGAGGTAAAAAACAAAA+CGG - chr7.4:41741422-41741441 MS.gene055278:CDS 40.0%
GGTTATTACAAGGCTGGAAA+GGG - chr7.4:41742527-41742546 MS.gene055278:CDS 40.0%
GTATCCTCTATGGTTTCCAA+TGG - chr7.4:41741807-41741826 MS.gene055278:CDS 40.0%
GTTTCCGCGCAAAGAATTAT+TGG + chr7.4:41740835-41740854 None:intergenic 40.0%
GTTTCTACCACGGTAAAAAC+AGG + chr7.4:41742074-41742093 None:intergenic 40.0%
TCAGAAAATTCACACTCCTC+AGG + chr7.4:41740561-41740580 None:intergenic 40.0%
TCGTTTACGCACTTTCTTGT+TGG - chr7.4:41742554-41742573 MS.gene055278:CDS 40.0%
TGAAAGAGGCCATTTCCATT+AGG + chr7.4:41741062-41741081 None:intergenic 40.0%
TGGTTATTACAAGGCTGGAA+AGG - chr7.4:41742526-41742545 MS.gene055278:CDS 40.0%
TTATCGACGAAGATAGCAAG+TGG - chr7.4:41742506-41742525 MS.gene055278:CDS 40.0%
TTGGCTCATATATTTGCCGA+TGG - chr7.4:41741584-41741603 MS.gene055278:CDS 40.0%
! AGTAGTGAAACTGATGGTGT+TGG - chr7.4:41740744-41740763 MS.gene055278:CDS 40.0%
! GAACGATGAACTATCGGTTA+AGG - chr7.4:41741127-41741146 MS.gene055278:CDS 40.0%
! GCTGATTTCCATCTCCAAAA+GGG + chr7.4:41741562-41741581 None:intergenic 40.0%
!! AAACTTGCTGGATGAATCTG+TGG - chr7.4:41742090-41742109 MS.gene055278:CDS 40.0%
!! AGTTATAGGCGAAAAGTACC+CGG - chr7.4:41740692-41740711 MS.gene055278:CDS 40.0%
!! ATTTCAAAAGGGTGTTGAGG+AGG - chr7.4:41741022-41741041 MS.gene055278:CDS 40.0%
!! CTTTTGGAGATGGAAATCAG+CGG - chr7.4:41741561-41741580 MS.gene055278:CDS 40.0%
!! GCAATTTCAAAAGGGTGTTG+AGG - chr7.4:41741019-41741038 MS.gene055278:CDS 40.0%
!!! GGTGTCCCATTTTTTTGCTA+TGG + chr7.4:41742002-41742021 None:intergenic 40.0%
!!! GTTGTTACCTGTTTTTACCG+TGG - chr7.4:41742064-41742083 MS.gene055278:CDS 40.0%
AAGGTTGTGAGAGAGTAGAG+AGG - chr7.4:41742359-41742378 MS.gene055278:CDS 45.0%
AATCTGCCGCAAGTTCAATG+AGG - chr7.4:41741765-41741784 MS.gene055278:CDS 45.0%
AATTCACACTCCTCAGGAGA+AGG + chr7.4:41740555-41740574 None:intergenic 45.0%
ACTTTCCACAACCTGGTTTC+AGG - chr7.4:41741897-41741916 MS.gene055278:CDS 45.0%
AGACTTTCATTACGACCAGG+AGG - chr7.4:41741845-41741864 MS.gene055278:CDS 45.0%
AGTAAGGTCTAGCTACCACA+AGG - chr7.4:41742477-41742496 MS.gene055278:CDS 45.0%
ATCGAGGTCGTTGTTGAAGA+AGG + chr7.4:41740516-41740535 None:intergenic 45.0%
ATCTGCCGCAAGTTCAATGA+GGG - chr7.4:41741766-41741785 MS.gene055278:CDS 45.0%
ATGGACCCTCATTGAACTTG+CGG + chr7.4:41741774-41741793 None:intergenic 45.0%
ATTCTTTGCGCGGAAACTTG+AGG - chr7.4:41740838-41740857 MS.gene055278:CDS 45.0%
CAATCTTGAGTTCCTCAAGC+TGG + chr7.4:41742027-41742046 None:intergenic 45.0%
CATCCAGCAAGTTTCTACCA+CGG + chr7.4:41742084-41742103 None:intergenic 45.0%
CATCGAAAGCTACGACTAGT+AGG - chr7.4:41741396-41741415 MS.gene055278:CDS 45.0%
GAAACCTGTAGATCACTGTC+TGG + chr7.4:41740969-41740988 None:intergenic 45.0%
GCAAGTGGTTATTACAAGGC+TGG - chr7.4:41742521-41742540 MS.gene055278:CDS 45.0%
GGAATAGACTTTCCACAACC+TGG - chr7.4:41741890-41741909 MS.gene055278:CDS 45.0%
TAAGGACGAGAAGGATGAGA+GGG - chr7.4:41741145-41741164 MS.gene055278:CDS 45.0%
TAGAGAGGCCAGAGACATAT+CGG - chr7.4:41742374-41742393 MS.gene055278:CDS 45.0%
TAGGCCATTGGAAACCATAG+AGG + chr7.4:41741814-41741833 None:intergenic 45.0%
TGTTCTTTGTGCACAAGCTG+TGG - chr7.4:41741478-41741497 MS.gene055278:CDS 45.0%
TTAAGGACGAGAAGGATGAG+AGG - chr7.4:41741144-41741163 MS.gene055278:CDS 45.0%
TTACCGTGGTAGAAACTTGC+TGG - chr7.4:41742078-41742097 MS.gene055278:CDS 45.0%
TTCCTCATGTGTCGAAATCG+AGG + chr7.4:41740532-41740551 None:intergenic 45.0%
TTCTCCAGACAGTGATCTAC+AGG - chr7.4:41740962-41740981 MS.gene055278:CDS 45.0%
TTCTTTGCGCGGAAACTTGA+GGG - chr7.4:41740839-41740858 MS.gene055278:CDS 45.0%
! ACTATCGGTTAAGGACGAGA+AGG - chr7.4:41741136-41741155 MS.gene055278:CDS 45.0%
! AGACAGCACTCAAACCCTTT+TGG - chr7.4:41741545-41741564 MS.gene055278:CDS 45.0%
! GCAACTCATGTGCGCTTTTA+TGG + chr7.4:41741514-41741533 None:intergenic 45.0%
! GTTGAAGAAGGTGTGCAATC+AGG + chr7.4:41740504-41740523 None:intergenic 45.0%
! TATATTTGCCGATGGCCTTG+AGG - chr7.4:41741592-41741611 MS.gene055278:CDS 45.0%
!! AGTGTAAGAAGTACCGTCGA+AGG - chr7.4:41740930-41740949 MS.gene055278:CDS 45.0%
!! CACTCAAACCCTTTTGGAGA+TGG - chr7.4:41741551-41741570 MS.gene055278:CDS 45.0%
!! CGCTGATTTCCATCTCCAAA+AGG + chr7.4:41741563-41741582 None:intergenic 45.0%
!! GTGTAAGAAGTACCGTCGAA+GGG - chr7.4:41740931-41740950 MS.gene055278:CDS 45.0%
!!! TTCTTTTTGGGTCCAAGGGA+AGG - chr7.4:41741174-41741193 MS.gene055278:CDS 45.0%
ACATGAGGAACCTTCTCCTG+AGG - chr7.4:41740542-41740561 MS.gene055278:CDS 50.0%
AGAATCCAGAGTCCCTTCGA+CGG + chr7.4:41740946-41740965 None:intergenic 50.0%
ATGTCTACTTCACCACCGTG+TGG + chr7.4:41741206-41741225 None:intergenic 50.0%
CTTGAGTTCCTCAAGCTGGA+TGG + chr7.4:41742023-41742042 None:intergenic 50.0%
GACCTCGATTTCGACACATG+AGG - chr7.4:41740527-41740546 MS.gene055278:CDS 50.0%
TCTTTGTGCACAAGCTGTGG+CGG - chr7.4:41741481-41741500 MS.gene055278:CDS 50.0%
TGGAGATGGAAATCAGCGGT+TGG - chr7.4:41741565-41741584 MS.gene055278:CDS 50.0%
! GAAGAAGGTGTGCAATCAGG+TGG + chr7.4:41740501-41740520 None:intergenic 50.0%
! GGTTTTCCTAACGGCGAAAC+CGG + chr7.4:41740714-41740733 None:intergenic 50.0%
! GTTTTCCTAACGGCGAAACC+GGG + chr7.4:41740713-41740732 None:intergenic 50.0%
! TCGAGCTGGGTTTTCACAAC+AGG - chr7.4:41742417-41742436 MS.gene055278:CDS 50.0%
!! AAGGGAAGGAAGCATCCACA+CGG - chr7.4:41741188-41741207 MS.gene055278:CDS 50.0%
!! TATAGAAACCGGTTCGCGCT+TGG - chr7.4:41741934-41741953 MS.gene055278:CDS 50.0%
AAGTACCCGGTTTCGCCGTT+AGG - chr7.4:41740705-41740724 MS.gene055278:CDS 55.0%
ACCTTGCAGCTTGCCCTTTC+CGG - chr7.4:41741705-41741724 MS.gene055278:CDS 55.0%
ACGACTAGTAGGAAAGGGCG+AGG - chr7.4:41741407-41741426 MS.gene055278:CDS 55.0%
ATCCTTTCCCAATCCTCGCG+AGG + chr7.4:41742286-41742305 None:intergenic 55.0%
ATGGGACACCATCCAGCTTG+AGG - chr7.4:41742012-41742031 MS.gene055278:CDS 55.0%
CAAACGTGCCTCAAGGCCAT+CGG + chr7.4:41741603-41741622 None:intergenic 55.0%
CCTGTGATCCGAAGTTTCGG+CGG + chr7.4:41741872-41741891 None:intergenic 55.0%
CTGTGGTAGTCGACAGTCCA+AGG - chr7.4:41742107-41742126 MS.gene055278:CDS 55.0%
GTGTGGATGCTTCCTTCCCT+TGG + chr7.4:41741189-41741208 None:intergenic 55.0%
TACCAGCCAAACGTGCCTCA+AGG + chr7.4:41741610-41741629 None:intergenic 55.0%
TATCGTGCCTCGCGAGGATT+GGG - chr7.4:41742276-41742295 MS.gene055278:CDS 55.0%
TGCCACTGCCGATATGTCTC+TGG + chr7.4:41742385-41742404 None:intergenic 55.0%
! AAGTACCGTCGAAGGGACTC+TGG - chr7.4:41740938-41740957 MS.gene055278:CDS 55.0%
! GCATTTTACGGCTCGTCGCA+AGG - chr7.4:41741331-41741350 MS.gene055278:CDS 55.0%
!! TGAAAGTATCGTGCCTCGCG+AGG - chr7.4:41742270-41742289 MS.gene055278:CDS 55.0%
ATACGCTGCCAAGCGCGAAC+CGG + chr7.4:41741945-41741964 None:intergenic 60.0%
CAGGAGGACCGCCGAAACTT+CGG - chr7.4:41741861-41741880 MS.gene055278:CDS 60.0%
CCGCCGAAACTTCGGATCAC+AGG - chr7.4:41741869-41741888 MS.gene055278:CDS 60.0%
GAGGCACGTTTGGCTGGTAC+AGG - chr7.4:41741611-41741630 MS.gene055278:CDS 60.0%
GGCCAGAGACATATCGGCAG+TGG - chr7.4:41742380-41742399 MS.gene055278:CDS 60.0%
GTATCGTGCCTCGCGAGGAT+TGG - chr7.4:41742275-41742294 MS.gene055278:CDS 60.0%
TCCGGAAAGGGCAAGCTGCA+AGG + chr7.4:41741709-41741728 None:intergenic 60.0%
TGCCTCGCGAGGATTGGGAA+AGG - chr7.4:41742281-41742300 MS.gene055278:CDS 60.0%
! CGATGGCCTTGAGGCACGTT+TGG - chr7.4:41741601-41741620 MS.gene055278:CDS 60.0%
!! GGAAGGAAGCATCCACACGG+TGG - chr7.4:41741191-41741210 MS.gene055278:CDS 60.0%
CGAAGTTTCGGCGGTCCTCC+TGG + chr7.4:41741863-41741882 None:intergenic 65.0%
CTCTCTGCGGGCCTGAAACC+AGG + chr7.4:41741911-41741930 None:intergenic 65.0%
GCGGGCCTGAAACCAGGTTG+TGG + chr7.4:41741905-41741924 None:intergenic 65.0%
GGCCTTGAGGCACGTTTGGC+TGG - chr7.4:41741605-41741624 MS.gene055278:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 41740492 41742588 41740492 ID=MS.gene055278
chr7.4 mRNA 41740492 41742588 41740492 ID=MS.gene055278.t1;Parent=MS.gene055278
chr7.4 exon 41740492 41742588 41740492 ID=MS.gene055278.t1.exon1;Parent=MS.gene055278.t1
chr7.4 CDS 41740492 41742588 41740492 ID=cds.MS.gene055278.t1;Parent=MS.gene055278.t1
Gene Sequence

>MS.gene055278

ATGATACCACCTGATTGCACACCTTCTTCAACAACGACCTCGATTTCGACACATGAGGAACCTTCTCCTGAGGAGTGTGAATTTTCTGATGCTGTTTTGAGTTACATCAATAACATCCTTATGGAAGAAGATATGGAAGATAAAACATGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCATTTTATGAAGTTATAGGCGAAAAGTACCCGGTTTCGCCGTTAGGAAAACCTCAAAGTCTTAGTAGTGAAACTGATGGTGTTGGAGATAATTACTTTTTTGATAATTATGGTACTTGTGTTGATGATGGTAATCTTAGTAGCATTTTTACCAATAATTCTTTGCGCGGAAACTTGAGGGAAGCTCAATTTCCTCATAATGGTTTTCAAGGAAATAGCATTGCACAATCATCTTATAGCTCGACAAACAGTGTAAGAAGTACCGTCGAAGGGACTCTGGATTCTCCAGACAGTGATCTACAGGTTTCTGATCAGAATAGTGAGAGTCAACCAATTTTGCAATTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAATGGAAATGGCCTCTTTCAAAATTTTGATGTTGCTAAGTATTCGATGATAGAGCCTAGAGTGATGAACGATGAACTATCGGTTAAGGACGAGAAGGATGAGAGGGATTCTTTTCTTTTTGGGTCCAAGGGAAGGAAGCATCCACACGGTGGTGAAGTAGACATTGAAGAAAATAGAAGCAGCAAGCAAGCAGCGATTTACTCAGAACCTTTGTTGCGTTCAACTATGATGGATACGTTCCTGCTTCATAGTTTAGGAGATGCTAAGACGCATTTTACGGCTCGTCGCAAGGCGTTACAAGTAAAAACAAAGATTATAACATTGCCAAGTAATACATCGAAAGCTACGACTAGTAGGAAAGGGCGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACACTGCTTGTTCTTTGTGCACAAGCTGTGGCGGCAGACGACCATAAAAGCGCACATGAGTTGCTAAAGCAGATCAGACAGCACTCAAACCCTTTTGGAGATGGAAATCAGCGGTTGGCTCATATATTTGCCGATGGCCTTGAGGCACGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACATCTGCTGCTGACTTTCTGAAAGCTTATCATCTATACCTTGCAGCTTGCCCTTTCCGGAAGATGACTAGTTTTGTCTCGAATGTCACTATATTTAAATCTGCCGCAAGTTCAATGAGGGTCCATGTTATAGACTTTGGTATCCTCTATGGTTTCCAATGGCCTACTTTCATACAAAGACTTTCATTACGACCAGGAGGACCGCCGAAACTTCGGATCACAGGAATAGACTTTCCACAACCTGGTTTCAGGCCCGCAGAGAGAATTATAGAAACCGGTTCGCGCTTGGCAGCGTATGCTGAATCTTTTAATGTGCCATTTGAGTATAATGCCATAGCAAAAAAATGGGACACCATCCAGCTTGAGGAACTCAAGATTGAAAAAGATGAATTCCTAGTTGTTACCTGTTTTTACCGTGGTAGAAACTTGCTGGATGAATCTGTGGTAGTCGACAGTCCAAGGAATAAAATCCTCAGTTTGATAAGAAGGATCAAACCGAATATATTCATTCACGGCATTGTTAATGGAGCCTTTAATGCTCCTTTCTTTGTTACTCGATTTAGGGAGGCGTTGTTTCACTTCTCTTCACTTTTCGATATGCTTGAAAGTATCGTGCCTCGCGAGGATTGGGAAAGGATGCTAATTGAGAAAGAGATATTTGGGAAGGAAGCATTGAATGTTATAGCTTGTGAAGGTTGTGAGAGAGTAGAGAGGCCAGAGACATATCGGCAGTGGCAAATTCGTATTCTTCGAGCTGGGTTTTCACAACAGGCTTTCGCGAAAACTACAGTAGAAAGAGCAGTGGAGAAAGTAAGGTCTAGCTACCACAAGGATTTTGTTATCGACGAAGATAGCAAGTGGTTATTACAAGGCTGGAAAGGGCGAATCGTTTACGCACTTTCTTGTTGGAAACTTGCTTGA
Protein sequence

>MS.gene055278.t1

MIPPDCTPSSTTTSISTHEEPSPEECEFSDAVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLGKPQSLSSETDGVGDNYFFDNYGTCVDDGNLSSIFTNNSLRGNLREAQFPHNGFQGNSIAQSSYSSTNSVRSTVEGTLDSPDSDLQVSDQNSESQPILQFQKGVEEANKFLPNGNGLFQNFDVAKYSMIEPRVMNDELSVKDEKDERDSFLFGSKGRKHPHGGEVDIEENRSSKQAAIYSEPLLRSTMMDTFLLHSLGDAKTHFTARRKALQVKTKIITLPSNTSKATTSRKGRGKKQNGKKEVIDLRTLLVLCAQAVAADDHKSAHELLKQIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYHLYLAACPFRKMTSFVSNVTIFKSAASSMRVHVIDFGILYGFQWPTFIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAESFNVPFEYNAIAKKWDTIQLEELKIEKDEFLVVTCFYRGRNLLDESVVVDSPRNKILSLIRRIKPNIFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLESIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQIRILRAGFSQQAFAKTTVERAVEKVRSSYHKDFVIDEDSKWLLQGWKGRIVYALSCWKLA