AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055351

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055351.t1 MTR_8g006470 87.456 287 20 1 1 271 1 287 7.60e-165 458
MS.gene055351.t1 MTR_4g029540 42.000 300 130 10 1 262 1 294 9.97e-58 186
MS.gene055351.t1 MTR_1g021230 45.283 106 43 1 10 100 57 162 6.52e-27 108
MS.gene055351.t1 MTR_3g052450 41.818 110 49 1 6 100 36 145 1.44e-26 108
MS.gene055351.t1 MTR_3g052430 41.121 107 48 1 9 100 40 146 1.41e-25 105
MS.gene055351.t1 MTR_7g010210 36.496 137 67 3 6 124 8 142 6.15e-25 100
MS.gene055351.t1 MTR_7g010210 36.296 135 70 2 6 124 8 142 8.48e-25 101
MS.gene055351.t1 MTR_1g110460 35.294 119 62 1 5 108 21 139 9.17e-25 100
MS.gene055351.t1 MTR_8g042410 40.566 106 48 1 10 100 37 142 9.27e-25 103
MS.gene055351.t1 MTR_5g029840 41.593 113 49 2 6 103 8 118 1.01e-24 101
MS.gene055351.t1 MTR_1g062940 42.982 114 45 3 1 98 1 110 1.60e-24 98.2
MS.gene055351.t1 MTR_4g105130 37.267 161 74 5 2 140 4 159 2.61e-24 100
MS.gene055351.t1 MTR_1g085640 34.132 167 84 2 2 142 4 170 5.04e-24 100
MS.gene055351.t1 MTR_7g076740 39.007 141 62 3 6 122 8 148 7.64e-24 98.2
MS.gene055351.t1 MTR_7g110830 42.105 114 51 1 2 100 4 117 8.40e-24 99.4
MS.gene055351.t1 MTR_6g012180 39.167 120 58 1 6 110 8 127 1.21e-23 98.2
MS.gene055351.t1 MTR_3g011610 36.792 106 52 1 10 100 37 142 1.27e-23 100
MS.gene055351.t1 MTR_4g478180 40.187 107 49 1 6 97 9 115 3.00e-23 97.4
MS.gene055351.t1 MTR_7g035075 38.053 113 55 1 10 107 14 126 3.18e-23 94.4
MS.gene055351.t1 MTR_5g007370 39.815 108 50 1 5 97 7 114 4.44e-23 96.3
MS.gene055351.t1 MTR_7g115650 38.655 119 58 1 10 113 12 130 4.71e-23 94.0
MS.gene055351.t1 MTR_1g086530 36.207 116 59 1 4 104 27 142 4.92e-23 95.5
MS.gene055351.t1 MTR_6g006030 39.815 108 49 2 10 101 14 121 5.58e-23 94.0
MS.gene055351.t1 MTR_2g011660 40.741 108 48 2 10 101 13 120 6.14e-23 96.7
MS.gene055351.t1 MTR_0140s0030 39.474 114 52 2 10 108 13 124 6.39e-23 96.3
MS.gene055351.t1 MTR_0489s0020 39.474 114 52 2 10 108 13 124 6.39e-23 96.3
MS.gene055351.t1 MTR_1g086510 35.043 117 61 1 3 104 14 130 7.86e-23 94.7
MS.gene055351.t1 MTR_1g043050 36.296 135 64 3 6 120 8 140 8.83e-23 94.4
MS.gene055351.t1 MTR_2g096380 40.164 122 58 1 7 113 3 124 1.06e-22 94.0
MS.gene055351.t1 MTR_2g089620 38.739 111 52 2 6 100 8 118 1.63e-22 95.1
MS.gene055351.t1 MTR_1g112760 39.640 111 52 1 2 97 5 115 4.63e-22 92.0
MS.gene055351.t1 MTR_8g098860 39.474 114 54 1 2 100 4 117 5.15e-22 93.6
MS.gene055351.t1 MTR_5g010020 41.121 107 48 1 2 93 4 110 5.21e-22 94.0
MS.gene055351.t1 MTR_2g099740 38.462 130 62 3 2 113 4 133 5.22e-22 94.7
MS.gene055351.t1 MTR_7g096930 35.200 125 64 2 10 119 12 134 6.17e-22 92.8
MS.gene055351.t1 MTR_2g089450 34.000 150 82 2 6 140 8 155 6.29e-22 92.0
MS.gene055351.t1 MTR_2g064160 38.739 111 53 1 2 97 3 113 8.40e-22 92.8
MS.gene055351.t1 MTR_3g039990 38.393 112 53 2 10 105 13 124 9.04e-22 92.8
MS.gene055351.t1 MTR_7g087130 39.167 120 54 3 10 110 12 131 1.01e-21 93.2
MS.gene055351.t1 MTR_4g094982 46.535 101 38 2 12 97 5 104 1.04e-21 92.0
MS.gene055351.t1 MTR_1g085040 39.474 114 54 1 2 100 4 117 1.11e-21 93.2
MS.gene055351.t1 MTR_8g017440 38.739 111 53 1 2 97 4 114 1.27e-21 92.8
MS.gene055351.t1 MTR_2g067420 40.777 103 46 1 6 93 10 112 1.28e-21 92.8
MS.gene055351.t1 MTR_3g077110 40.179 112 50 2 7 103 9 118 1.31e-21 92.8
MS.gene055351.t1 MTR_8g017540 35.766 137 71 2 2 121 50 186 1.53e-21 93.2
MS.gene055351.t1 MTR_8g017340 42.857 112 48 2 2 97 4 115 1.66e-21 94.0
MS.gene055351.t1 MTR_4g091490 38.889 108 50 2 10 101 13 120 1.73e-21 92.8
MS.gene055351.t1 MTR_1g045610 37.719 114 56 1 2 100 13 126 3.39e-21 90.1
MS.gene055351.t1 MTR_2g089420 29.386 228 131 6 6 209 7 228 3.52e-21 92.8
MS.gene055351.t1 MTR_3g074520 37.383 107 52 1 6 97 8 114 4.28e-21 91.3
MS.gene055351.t1 MTR_6g012690 34.559 136 72 2 6 126 8 141 4.44e-21 91.7
MS.gene055351.t1 MTR_5g016510 46.535 101 38 2 12 97 5 104 6.64e-21 90.5
MS.gene055351.t1 MTR_1g043080 33.846 130 70 2 6 119 8 137 6.71e-21 89.4
MS.gene055351.t1 MTR_4g082290 37.037 108 52 2 10 101 12 119 6.90e-21 91.7
MS.gene055351.t1 MTR_8g031360 43.269 104 43 2 10 97 13 116 1.03e-20 89.7
MS.gene055351.t1 MTR_7g011170 37.037 108 52 2 10 101 12 119 1.48e-20 89.4
MS.gene055351.t1 MTR_6g090405 34.228 149 76 4 6 132 8 156 1.89e-20 88.2
MS.gene055351.t1 MTR_4g123040 36.441 118 60 1 1 103 15 132 2.04e-20 89.0
MS.gene055351.t1 MTR_1g100667 40.179 112 51 2 11 106 14 125 2.40e-20 88.2
MS.gene055351.t1 MTR_1g073170 37.383 107 52 1 6 97 16 122 2.52e-20 87.8
MS.gene055351.t1 MTR_2g097910 38.261 115 54 2 10 109 20 132 3.02e-20 88.6
MS.gene055351.t1 MTR_8g017390 39.286 112 52 2 2 97 4 115 3.47e-20 90.1
MS.gene055351.t1 MTR_1g076150 36.441 118 58 2 10 112 12 127 3.59e-20 87.4
MS.gene055351.t1 MTR_4g082230 37.037 108 52 2 10 101 12 119 3.63e-20 89.4
MS.gene055351.t1 MTR_4g019370 42.574 101 42 2 12 97 38 137 3.71e-20 89.0
MS.gene055351.t1 MTR_8g017350 41.071 112 50 2 2 97 4 115 3.80e-20 90.1
MS.gene055351.t1 MTR_8g095390 38.318 107 51 1 6 97 8 114 3.80e-20 88.2
MS.gene055351.t1 MTR_8g017500 36.937 111 55 1 2 97 4 114 7.58e-20 87.8
MS.gene055351.t1 MTR_3g097450 38.318 107 51 1 6 97 8 114 7.72e-20 87.4
MS.gene055351.t1 MTR_1g100653 37.736 106 51 1 10 100 12 117 8.48e-20 87.0
MS.gene055351.t1 MTR_5g079670 37.383 107 52 1 6 97 7 113 1.09e-19 85.1
MS.gene055351.t1 MTR_4g063100 41.667 108 46 2 7 97 4 111 1.18e-19 85.9
MS.gene055351.t1 MTR_1g017000 37.963 108 51 2 6 97 8 115 1.81e-19 85.5
MS.gene055351.t1 MTR_0008s0280 31.884 138 78 2 6 128 8 144 1.84e-19 85.1
MS.gene055351.t1 MTR_7g111290 39.623 106 49 1 2 92 4 109 1.99e-19 87.0
MS.gene055351.t1 MTR_5g042030 37.963 108 51 2 10 101 7 114 2.11e-19 85.9
MS.gene055351.t1 MTR_6g009430 36.607 112 55 2 6 101 8 119 2.32e-19 86.7
MS.gene055351.t1 MTR_5g088080 37.963 108 51 2 10 101 12 119 2.76e-19 85.1
MS.gene055351.t1 MTR_5g088150 37.963 108 51 2 10 101 12 119 2.76e-19 85.1
MS.gene055351.t1 MTR_5g488210 37.963 108 51 2 10 101 12 119 2.76e-19 85.1
MS.gene055351.t1 MTR_5g088640 37.963 108 51 2 10 101 12 119 2.83e-19 85.5
MS.gene055351.t1 MTR_3g101290 41.748 103 44 2 12 99 37 138 3.57e-19 84.0
MS.gene055351.t1 MTR_5g488170 37.963 108 51 2 10 101 12 119 4.24e-19 84.3
MS.gene055351.t1 MTR_4g065017 37.500 128 62 4 3 112 9 136 4.32e-19 85.5
MS.gene055351.t1 MTR_5g088610 40.385 104 46 2 10 97 9 112 4.65e-19 85.9
MS.gene055351.t1 MTR_0251s0050 39.048 105 48 2 10 98 13 117 5.16e-19 84.7
MS.gene055351.t1 MTR_3g461490 36.449 107 53 1 6 97 8 114 5.45e-19 85.5
MS.gene055351.t1 MTR_0008s0390 33.835 133 72 2 10 126 13 145 6.25e-19 84.3
MS.gene055351.t1 MTR_1g026870 41.584 101 43 2 12 97 85 184 8.08e-19 86.3
MS.gene055351.t1 MTR_2g095520 35.461 141 71 3 6 130 8 144 1.49e-18 84.0
MS.gene055351.t1 MTR_4g073420 36.607 112 54 2 6 100 8 119 1.62e-18 83.6
MS.gene055351.t1 MTR_5g062790 37.383 107 51 2 10 100 9 115 1.66e-18 83.6
MS.gene055351.t1 MTR_0008s0470 36.885 122 61 2 10 115 13 134 1.75e-18 83.6
MS.gene055351.t1 MTR_8g027345 36.207 116 58 2 10 109 12 127 1.92e-18 83.6
MS.gene055351.t1 MTR_2g033170 35.294 119 62 1 1 104 15 133 1.96e-18 84.0
MS.gene055351.t1 MTR_0063s0090 36.364 110 55 1 6 100 8 117 3.29e-18 81.3
MS.gene055351.t1 MTR_3g110028 40.594 101 44 2 12 97 85 184 3.63e-18 84.3
MS.gene055351.t1 MTR_4g057635 37.037 108 52 2 6 97 8 115 4.27e-18 82.8
MS.gene055351.t1 MTR_1g017140 29.851 201 112 6 6 188 8 197 4.30e-18 82.8
MS.gene055351.t1 MTR_2g088170 41.509 106 47 1 10 100 29 134 5.73e-18 83.6
MS.gene055351.t1 MTR_3g028740 38.835 103 48 1 10 97 22 124 6.81e-18 82.4
MS.gene055351.t1 MTR_5g049190 36.697 109 53 2 4 97 11 118 6.96e-18 80.9
MS.gene055351.t1 MTR_3g065440 36.449 107 53 1 6 97 8 114 7.66e-18 82.0
MS.gene055351.t1 MTR_5g078140 36.449 107 53 1 6 97 8 114 9.21e-18 81.6
MS.gene055351.t1 MTR_7g061330 33.790 219 107 7 12 198 77 289 9.39e-18 83.2
MS.gene055351.t1 MTR_7g061330 33.790 219 107 7 12 198 113 325 9.51e-18 83.2
MS.gene055351.t1 MTR_7g461410 33.790 219 107 7 12 198 113 325 9.51e-18 83.2
MS.gene055351.t1 MTR_4g102380 37.383 107 52 1 6 97 8 114 9.94e-18 80.9
MS.gene055351.t1 MTR_1g083630 35.135 111 57 1 6 101 8 118 1.08e-17 82.8
MS.gene055351.t1 MTR_6g055910 39.216 102 47 1 11 97 15 116 1.09e-17 81.3
MS.gene055351.t1 MTR_4g121460 34.951 103 52 1 10 97 12 114 1.18e-17 81.6
MS.gene055351.t1 MTR_6g015455 45.833 96 36 2 12 92 5 99 2.00e-17 82.4
MS.gene055351.t1 MTR_7g037260 39.423 104 47 2 9 97 142 244 2.66e-17 80.9
MS.gene055351.t1 MTR_2g034790 35.922 103 51 1 10 97 12 114 4.89e-17 79.7
MS.gene055351.t1 MTR_3g463400 41.584 101 43 2 12 97 133 232 6.13e-17 80.5
MS.gene055351.t1 MTR_3g083540 34.343 99 50 1 10 93 41 139 7.24e-17 79.0
MS.gene055351.t1 MTR_4g105660 39.806 103 46 2 10 97 178 279 8.25e-17 80.1
MS.gene055351.t1 MTR_3g103570 36.111 108 53 2 6 97 8 115 8.83e-17 79.3
MS.gene055351.t1 MTR_4g100720 33.333 102 53 1 7 93 10 111 1.05e-16 76.3
MS.gene055351.t1 MTR_4g485530 36.634 101 49 1 12 97 14 114 1.11e-16 76.6
MS.gene055351.t1 MTR_5g014990 36.111 108 53 2 6 97 8 115 1.52e-16 78.2
MS.gene055351.t1 MTR_4g125520 22.831 219 151 3 7 209 9 225 2.00e-16 77.8
MS.gene055351.t1 MTR_5g070020 36.697 109 53 2 4 97 114 221 3.89e-16 77.4
MS.gene055351.t1 MTR_7g102110 36.111 108 53 2 6 97 8 115 4.06e-16 76.6
MS.gene055351.t1 MTR_7g037130 35.294 119 60 3 9 112 142 258 7.14e-16 76.6
MS.gene055351.t1 MTR_5g079120 25.912 274 159 10 6 262 57 303 7.68e-16 76.3
MS.gene055351.t1 MTR_7g117730 32.323 99 52 1 10 93 12 110 7.97e-16 75.5
MS.gene055351.t1 MTR_3g077650 38.614 101 46 2 12 97 181 280 8.10e-16 77.0
MS.gene055351.t1 MTR_8g020490 34.343 99 50 1 10 93 8 106 8.15e-16 75.5
MS.gene055351.t1 MTR_4g128670 36.538 104 50 2 6 93 8 111 1.26e-15 75.9
MS.gene055351.t1 MTR_7g109320 33.083 133 69 4 10 127 12 139 1.36e-15 75.9
MS.gene055351.t1 MTR_6g074860 38.462 104 48 2 12 100 4 106 1.39e-15 74.7
MS.gene055351.t1 MTR_4g088015 37.500 104 49 2 9 97 218 320 1.69e-15 76.3
MS.gene055351.t1 MTR_5g082910 42.268 97 40 2 12 93 19 114 1.88e-15 74.7
MS.gene055351.t1 MTR_7g451170 38.614 101 46 2 12 97 191 290 2.32e-15 75.5
MS.gene055351.t1 MTR_5g079290 35.455 110 54 2 10 102 17 126 2.32e-15 74.3
MS.gene055351.t1 MTR_4g097570 34.951 103 51 2 6 92 8 110 2.61e-15 74.7
MS.gene055351.t1 MTR_5g078910 33.981 103 53 1 10 97 7 109 3.90e-15 74.3
MS.gene055351.t1 MTR_5g079220 35.185 108 53 2 10 100 21 128 5.14e-15 73.6
MS.gene055351.t1 MTR_5g078930 31.034 145 74 3 11 136 10 147 1.23e-14 71.6
MS.gene055351.t1 MTR_8g060940 36.082 97 47 1 10 91 7 103 1.56e-14 71.6
MS.gene055351.t1 MTR_7g450950 35.135 111 56 2 12 107 157 266 1.58e-14 72.8
MS.gene055351.t1 MTR_5g078950 35.052 97 48 1 10 91 7 103 2.14e-14 71.6
MS.gene055351.t1 MTR_0247s0040 35.354 99 49 1 10 93 7 105 2.30e-14 70.1
MS.gene055351.t1 MTR_4g097570 34.615 104 51 3 6 92 8 111 2.77e-14 71.6
MS.gene055351.t1 MTR_0001s0360 35.354 99 49 1 10 93 7 105 5.06e-14 70.5
MS.gene055351.t1 MTR_5g078800 33.010 103 54 1 10 97 7 109 5.39e-14 70.5
MS.gene055351.t1 MTR_7g017260 32.432 148 70 5 10 136 25 163 6.38e-14 70.5
MS.gene055351.t1 MTR_7g061550 39.362 94 40 2 15 91 10 103 7.08e-14 70.9
MS.gene055351.t1 MTR_5g078860 33.981 103 53 1 10 97 7 109 8.82e-14 70.5
MS.gene055351.t1 MTR_5g041570 38.462 104 48 2 12 100 134 236 1.84e-13 70.1
MS.gene055351.t1 MTR_7g035350 36.364 99 47 2 15 98 228 325 1.97e-13 70.1
MS.gene055351.t1 MTR_2g096380 38.824 85 37 1 44 113 21 105 2.31e-13 67.8
MS.gene055351.t1 MTR_4g082040 34.711 121 60 3 12 117 105 221 2.45e-13 69.7
MS.gene055351.t1 MTR_3g045430 32.407 108 57 2 10 101 13 120 3.62e-13 68.6
MS.gene055351.t1 MTR_1g085880 36.937 111 53 3 7 100 8 118 5.18e-13 66.6
MS.gene055351.t1 MTR_5g010650 38.542 96 43 2 12 92 110 204 7.47e-13 68.6
MS.gene055351.t1 MTR_0193s0090 32.039 103 55 1 10 97 7 109 7.58e-13 66.2
MS.gene055351.t1 MTR_1g085770 36.937 111 53 3 7 100 8 118 1.21e-12 67.0
MS.gene055351.t1 MTR_2g096380 44.262 61 34 0 53 113 1 61 1.29e-12 65.1
MS.gene055351.t1 MTR_3g089045 38.462 104 48 2 3 91 7 109 2.42e-12 66.2
MS.gene055351.t1 MTR_6g027360 28.846 156 83 3 10 150 76 218 4.34e-12 65.5
MS.gene055351.t1 MTR_6g027340 28.571 154 82 3 12 150 16 156 5.86e-12 63.9
MS.gene055351.t1 MTR_1g057980 34.286 105 53 2 9 98 77 180 8.80e-12 64.3
MS.gene055351.t1 MTR_0197s0010 32.632 95 49 1 14 93 5 99 2.02e-11 62.8
MS.gene055351.t1 MTR_4g063100 42.254 71 24 2 44 97 12 82 3.06e-11 62.0
MS.gene055351.t1 MTR_4g128190 33.945 109 43 4 10 102 11 106 3.35e-11 62.0
MS.gene055351.t1 MTR_4g063100 53.191 47 20 1 53 97 1 47 8.30e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055351.t1 AT3G60460 44.771 306 122 11 1 268 4 300 9.12e-66 207
MS.gene055351.t1 AT4G26930 44.340 106 44 1 10 100 19 124 2.60e-27 109
MS.gene055351.t1 AT5G55020 41.509 106 47 1 10 100 26 131 2.54e-25 105
MS.gene055351.t1 AT3G27810 31.579 152 88 2 10 146 20 170 6.82e-25 99.4
MS.gene055351.t1 AT2G32460 41.509 106 47 1 10 100 18 123 7.24e-25 103
MS.gene055351.t1 AT2G32460 41.509 106 47 1 10 100 6 111 7.39e-25 103
MS.gene055351.t1 AT5G06100 37.273 110 54 1 6 100 28 137 6.89e-24 100
MS.gene055351.t1 AT3G11440 38.679 106 50 1 10 100 41 146 8.62e-24 100
MS.gene055351.t1 AT3G01140 37.405 131 65 2 6 121 8 136 1.12e-23 98.6
MS.gene055351.t1 AT3G01140 37.405 131 65 2 6 121 51 179 1.25e-23 99.0
MS.gene055351.t1 AT5G06100 37.273 110 54 1 6 100 28 137 1.35e-23 100
MS.gene055351.t1 AT5G06100 37.273 110 54 1 6 100 28 137 1.35e-23 100
MS.gene055351.t1 AT5G06100 37.273 110 54 1 6 100 28 137 1.35e-23 100
MS.gene055351.t1 AT5G06100 37.273 110 54 1 6 100 28 137 1.35e-23 100
MS.gene055351.t1 AT3G47600 34.437 151 79 4 6 139 8 155 1.36e-23 98.2
MS.gene055351.t1 AT2G26960 43.810 105 44 1 12 101 22 126 1.42e-23 99.4
MS.gene055351.t1 AT3G11440 38.679 106 50 1 10 100 41 146 2.05e-23 99.8
MS.gene055351.t1 AT3G11440 38.679 106 50 1 10 100 41 146 2.05e-23 99.8
MS.gene055351.t1 AT3G11440 38.679 106 50 1 10 100 41 146 2.05e-23 99.8
MS.gene055351.t1 AT5G40350 38.983 118 55 2 10 112 17 132 3.88e-23 94.4
MS.gene055351.t1 AT1G74650 36.585 123 63 1 10 117 12 134 5.85e-23 96.3
MS.gene055351.t1 AT3G61250 41.964 112 48 2 6 102 8 117 5.88e-23 95.9
MS.gene055351.t1 AT1G08810 36.054 147 77 2 6 137 8 152 6.89e-23 95.1
MS.gene055351.t1 AT2G47190 39.091 110 52 1 10 104 20 129 7.73e-23 95.1
MS.gene055351.t1 AT3G12720 41.803 122 54 2 10 114 22 143 8.07e-23 95.5
MS.gene055351.t1 AT1G48000 37.273 110 54 1 10 104 32 141 1.12e-22 94.0
MS.gene055351.t1 AT4G01680 41.818 110 49 1 7 101 9 118 1.21e-22 94.0
MS.gene055351.t1 AT3G01530 38.136 118 55 2 4 106 19 133 1.34e-22 92.8
MS.gene055351.t1 AT4G28110 38.739 111 52 2 6 100 8 118 1.87e-22 94.4
MS.gene055351.t1 AT3G02940 37.500 112 54 2 6 101 8 119 1.92e-22 94.7
MS.gene055351.t1 AT4G01680 41.818 110 49 1 7 101 9 118 1.96e-22 95.1
MS.gene055351.t1 AT3G13890 39.640 111 52 1 2 97 4 114 1.97e-22 95.5
MS.gene055351.t1 AT3G48920 42.857 112 49 1 5 101 13 124 2.16e-22 93.6
MS.gene055351.t1 AT1G68320 36.207 116 59 1 8 108 17 132 2.30e-22 94.0
MS.gene055351.t1 AT3G02940 37.500 112 54 2 6 101 8 119 2.56e-22 94.4
MS.gene055351.t1 AT3G02940 37.500 112 54 2 6 101 8 119 2.56e-22 94.4
MS.gene055351.t1 AT4G21440 38.889 108 50 2 10 101 12 119 7.30e-22 93.6
MS.gene055351.t1 AT5G62470 36.434 129 59 2 10 115 12 140 7.47e-22 93.6
MS.gene055351.t1 AT1G25340 34.426 122 65 1 2 108 10 131 8.25e-22 92.4
MS.gene055351.t1 AT5G65230 39.252 107 50 1 6 97 8 114 8.52e-22 92.8
MS.gene055351.t1 AT3G50060 47.525 101 37 2 12 97 6 105 1.10e-21 92.4
MS.gene055351.t1 AT5G59780 39.831 118 56 1 7 109 5 122 1.33e-21 90.9
MS.gene055351.t1 AT5G26660 40.367 109 50 1 7 100 9 117 1.82e-21 92.4
MS.gene055351.t1 AT1G63910 39.474 114 54 1 2 100 4 117 1.96e-21 92.8
MS.gene055351.t1 AT5G54230 37.963 108 51 2 10 101 12 119 2.08e-21 92.0
MS.gene055351.t1 AT3G28910 38.318 107 51 1 6 97 8 114 2.19e-21 92.0
MS.gene055351.t1 AT2G16720 38.168 131 62 4 6 120 8 135 2.42e-21 90.9
MS.gene055351.t1 AT1G79180 41.441 111 49 2 6 100 10 120 2.52e-21 91.3
MS.gene055351.t1 AT1G09540 40.541 111 51 1 2 97 4 114 2.64e-21 92.4
MS.gene055351.t1 AT5G16770 37.500 112 54 2 6 101 8 119 2.75e-21 91.7
MS.gene055351.t1 AT5G16770 37.500 112 54 2 6 101 8 119 2.75e-21 91.7
MS.gene055351.t1 AT5G15310 28.856 201 111 5 6 186 8 196 2.95e-21 90.1
MS.gene055351.t1 AT5G16770 37.500 112 54 2 6 101 8 119 3.17e-21 91.7
MS.gene055351.t1 AT5G16770 37.500 112 54 2 6 101 8 119 3.17e-21 91.7
MS.gene055351.t1 AT5G15310 35.115 131 68 2 6 121 8 136 3.57e-21 91.3
MS.gene055351.t1 AT5G15310 35.115 131 68 2 6 121 8 136 3.95e-21 91.3
MS.gene055351.t1 AT4G34990 35.385 130 67 2 6 120 8 135 7.59e-21 89.7
MS.gene055351.t1 AT1G22640 38.318 107 51 1 6 97 8 114 8.32e-21 89.4
MS.gene055351.t1 AT3G46130 40.367 109 50 1 7 100 6 114 1.02e-20 89.0
MS.gene055351.t1 AT2G31180 36.522 115 57 2 10 108 12 126 1.03e-20 89.0
MS.gene055351.t1 AT3G30210 39.806 103 47 1 10 97 27 129 1.10e-20 89.4
MS.gene055351.t1 AT1G57560 37.607 117 56 2 2 103 4 118 1.35e-20 89.0
MS.gene055351.t1 AT1G57560 37.607 117 56 2 2 103 4 118 1.58e-20 89.4
MS.gene055351.t1 AT1G35515 36.025 161 77 7 6 142 8 166 2.27e-20 87.0
MS.gene055351.t1 AT3G55730 41.600 125 52 4 12 116 56 179 2.74e-20 89.7
MS.gene055351.t1 AT5G62470 36.434 129 58 3 10 115 12 139 3.70e-20 89.0
MS.gene055351.t1 AT3G13890 36.667 120 52 2 2 97 4 123 4.02e-20 89.0
MS.gene055351.t1 AT4G05100 37.615 109 51 2 10 103 13 119 4.45e-20 88.2
MS.gene055351.t1 AT4G13480 35.115 131 64 2 7 122 3 127 4.51e-20 87.4
MS.gene055351.t1 AT5G67300 46.535 101 38 2 12 97 6 105 4.59e-20 88.2
MS.gene055351.t1 AT1G16490 40.000 110 50 2 6 99 10 119 6.60e-20 87.0
MS.gene055351.t1 AT2G23290 44.248 113 46 3 1 97 1 112 7.16e-20 87.4
MS.gene055351.t1 AT3G53200 38.889 108 51 1 5 97 4 111 1.10e-19 85.9
MS.gene055351.t1 AT5G10280 36.449 107 53 1 6 97 8 114 1.16e-19 87.4
MS.gene055351.t1 AT3G24310 35.156 128 62 2 7 119 15 136 1.20e-19 86.3
MS.gene055351.t1 AT4G37780 39.815 108 49 2 6 97 8 115 1.24e-19 87.0
MS.gene055351.t1 AT4G09460 36.000 150 72 6 6 134 8 154 1.27e-19 85.5
MS.gene055351.t1 AT1G34670 36.449 107 53 1 6 97 8 114 1.65e-19 87.4
MS.gene055351.t1 AT4G01680 38.525 122 48 3 7 101 9 130 2.36e-19 86.7
MS.gene055351.t1 AT3G12820 39.823 113 51 2 6 103 10 120 2.60e-19 84.7
MS.gene055351.t1 AT4G38620 37.383 107 52 1 6 97 8 114 3.19e-19 85.5
MS.gene055351.t1 AT5G02320 43.243 111 46 3 12 106 127 236 3.24e-19 87.4
MS.gene055351.t1 AT5G02320 43.243 111 46 3 12 106 127 236 3.24e-19 87.4
MS.gene055351.t1 AT1G25340 33.607 122 61 2 2 108 10 126 3.39e-19 85.1
MS.gene055351.t1 AT4G37260 42.202 109 46 3 4 97 6 112 4.25e-19 85.5
MS.gene055351.t1 AT2G39880 42.574 101 42 2 12 97 50 149 4.75e-19 85.9
MS.gene055351.t1 AT5G07690 37.736 106 51 1 8 98 10 115 5.20e-19 85.5
MS.gene055351.t1 AT5G02320 43.243 111 46 3 12 106 67 176 5.22e-19 86.7
MS.gene055351.t1 AT1G56160 36.449 107 53 1 6 97 10 116 5.60e-19 84.7
MS.gene055351.t1 AT1G25340 33.607 122 61 2 2 108 10 126 6.01e-19 85.1
MS.gene055351.t1 AT5G07700 39.048 105 49 1 8 97 10 114 6.73e-19 85.1
MS.gene055351.t1 AT5G07700 39.048 105 49 1 8 97 10 114 6.73e-19 85.1
MS.gene055351.t1 AT5G61420 37.838 111 52 2 8 103 10 118 7.92e-19 85.5
MS.gene055351.t1 AT5G14750 36.792 106 52 1 3 93 9 114 1.19e-18 82.0
MS.gene055351.t1 AT5G56110 36.449 107 53 1 6 97 8 114 1.31e-18 84.3
MS.gene055351.t1 AT4G25560 37.190 121 59 2 1 106 1 119 1.36e-18 83.6
MS.gene055351.t1 AT3G23250 32.026 153 83 3 10 146 12 159 1.63e-18 83.6
MS.gene055351.t1 AT5G23000 34.783 161 85 4 6 148 8 166 1.82e-18 84.0
MS.gene055351.t1 AT1G18570 37.719 114 54 2 5 103 8 119 1.86e-18 84.3
MS.gene055351.t1 AT3G28470 38.835 103 48 1 6 93 8 110 2.16e-18 83.6
MS.gene055351.t1 AT3G27920 35.484 124 63 3 4 111 9 131 2.18e-18 82.0
MS.gene055351.t1 AT4G18770 41.584 101 43 2 12 97 217 316 2.22e-18 84.7
MS.gene055351.t1 AT5G40330 37.864 103 48 2 7 93 8 110 2.24e-18 81.6
MS.gene055351.t1 AT1G74430 38.739 111 52 2 6 100 8 118 2.44e-18 82.8
MS.gene055351.t1 AT5G49620 39.091 110 52 1 10 104 26 135 2.65e-18 83.2
MS.gene055351.t1 AT4G22680 38.053 113 53 2 6 103 8 118 3.04e-18 82.4
MS.gene055351.t1 AT5G57620 37.963 108 51 2 6 97 8 115 3.60e-18 83.2
MS.gene055351.t1 AT3G13540 35.514 107 53 2 10 100 23 129 4.11e-18 81.6
MS.gene055351.t1 AT3G06490 37.391 115 57 1 5 104 14 128 4.43e-18 82.8
MS.gene055351.t1 AT4G32730 35.065 154 70 4 12 144 87 231 5.21e-18 84.0
MS.gene055351.t1 AT4G32730 35.065 154 70 4 12 144 87 231 5.21e-18 84.0
MS.gene055351.t1 AT4G32730 35.065 154 70 4 12 144 87 231 5.21e-18 84.0
MS.gene055351.t1 AT4G32730 35.065 154 70 4 12 144 87 231 5.21e-18 84.0
MS.gene055351.t1 AT5G11510 38.614 101 46 2 12 97 81 180 5.32e-18 84.0
MS.gene055351.t1 AT5G11510 38.614 101 46 2 12 97 81 180 5.32e-18 84.0
MS.gene055351.t1 AT5G11510 38.614 101 46 2 12 97 81 180 5.32e-18 84.0
MS.gene055351.t1 AT1G66230 36.364 110 55 1 6 100 8 117 5.80e-18 82.0
MS.gene055351.t1 AT5G11510 38.614 101 46 2 12 97 81 180 5.87e-18 84.0
MS.gene055351.t1 AT4G32730 35.065 154 70 4 12 144 87 231 5.93e-18 84.0
MS.gene055351.t1 AT5G11510 38.614 101 46 2 12 97 81 180 5.98e-18 84.0
MS.gene055351.t1 AT4G17785 36.893 103 50 1 10 97 13 115 6.62e-18 82.8
MS.gene055351.t1 AT4G17785 36.893 103 50 1 10 97 13 115 6.68e-18 82.4
MS.gene055351.t1 AT5G49330 35.922 103 51 1 10 97 12 114 1.18e-17 81.6
MS.gene055351.t1 AT2G47460 34.951 103 52 1 10 97 12 114 1.28e-17 82.0
MS.gene055351.t1 AT1G06180 34.951 103 52 1 10 97 12 114 2.83e-17 79.3
MS.gene055351.t1 AT3G09370 42.574 101 42 2 12 97 135 234 3.07e-17 81.6
MS.gene055351.t1 AT3G09370 42.574 101 42 2 12 97 130 229 3.14e-17 81.6
MS.gene055351.t1 AT5G12870 36.036 111 55 2 10 104 18 128 3.18e-17 79.7
MS.gene055351.t1 AT2G26950 38.235 102 48 1 12 98 18 119 3.73e-17 80.9
MS.gene055351.t1 AT5G62320 36.885 122 52 3 1 97 1 122 3.93e-17 79.0
MS.gene055351.t1 AT3G09370 42.574 101 42 2 12 97 143 242 3.97e-17 81.3
MS.gene055351.t1 AT4G12350 36.283 113 55 2 6 103 8 118 4.63e-17 79.3
MS.gene055351.t1 AT1G18710 37.838 111 53 2 6 100 8 118 4.68e-17 79.0
MS.gene055351.t1 AT1G69560 28.889 225 130 6 3 204 114 331 5.75e-17 79.7
MS.gene055351.t1 AT3G09230 39.640 111 48 3 2 97 48 154 6.05e-17 80.1
MS.gene055351.t1 AT3G08500 35.455 110 56 1 3 97 23 132 6.13e-17 79.7
MS.gene055351.t1 AT1G69560 28.889 225 130 6 3 204 98 315 6.55e-17 79.7
MS.gene055351.t1 AT3G49690 37.037 108 52 2 6 97 8 115 8.00e-17 79.0
MS.gene055351.t1 AT5G58850 35.780 109 54 2 4 97 97 204 1.02e-16 79.7
MS.gene055351.t1 AT5G60890 34.906 106 54 1 7 97 9 114 1.03e-16 78.6
MS.gene055351.t1 AT5G52600 33.333 102 53 1 7 93 9 110 1.16e-16 76.6
MS.gene055351.t1 AT1G79180 33.103 145 46 4 6 100 10 153 1.18e-16 79.0
MS.gene055351.t1 AT5G65790 36.111 108 53 2 6 97 8 115 1.59e-16 79.0
MS.gene055351.t1 AT2G36890 34.188 117 59 3 6 106 8 122 3.09e-16 77.4
MS.gene055351.t1 AT5G14340 30.464 151 84 3 6 139 20 166 3.15e-16 77.0
MS.gene055351.t1 AT5G16600 36.364 110 55 1 6 100 8 117 3.56e-16 77.4
MS.gene055351.t1 AT3G62610 34.951 103 52 1 10 97 12 114 3.71e-16 77.4
MS.gene055351.t1 AT5G52260 36.752 117 57 2 3 104 5 119 3.88e-16 76.6
MS.gene055351.t1 AT2G36890 35.185 108 54 2 6 97 49 156 4.04e-16 77.4
MS.gene055351.t1 AT5G40360 38.393 112 51 3 2 98 150 258 4.18e-16 77.4
MS.gene055351.t1 AT5G35550 32.174 115 61 2 7 106 11 123 6.36e-16 75.9
MS.gene055351.t1 AT4G00540 44.444 108 40 4 10 98 101 207 1.61e-15 76.3
MS.gene055351.t1 AT1G74080 33.962 106 55 1 8 98 10 115 2.58e-15 75.1
MS.gene055351.t1 AT4G00540 44.444 108 40 4 10 98 99 205 2.77e-15 75.5
MS.gene055351.t1 AT1G66370 26.829 246 139 9 10 238 8 229 3.64e-15 73.6
MS.gene055351.t1 AT5G49620 34.677 124 52 2 10 104 26 149 5.57e-15 73.9
MS.gene055351.t1 AT3G27785 36.893 103 49 2 10 97 187 288 6.96e-15 74.3
MS.gene055351.t1 AT5G11050 34.286 105 53 2 8 97 101 204 1.48e-14 73.6
MS.gene055351.t1 AT3G27810 29.661 118 67 2 44 146 5 121 3.01e-14 69.7
MS.gene055351.t1 AT3G29020 34.821 112 54 3 12 108 65 172 5.97e-14 70.1
MS.gene055351.t1 AT3G29020 34.821 112 54 3 12 108 67 174 6.67e-14 70.9
MS.gene055351.t1 AT1G26780 38.462 104 48 2 12 100 98 200 1.45e-13 70.1
MS.gene055351.t1 AT1G26780 38.462 104 48 2 12 100 98 200 1.84e-13 69.3
MS.gene055351.t1 AT1G17950 36.538 104 50 2 12 100 5 107 1.98e-13 68.6
MS.gene055351.t1 AT5G17800 37.500 104 49 2 12 100 93 195 2.11e-13 69.3
MS.gene055351.t1 AT3G47600 34.746 118 67 5 24 139 40 149 7.13e-13 67.8
MS.gene055351.t1 AT2G37630 38.298 94 41 2 15 91 7 100 1.49e-12 67.4
MS.gene055351.t1 AT3G46130 41.667 72 27 1 44 100 11 82 1.63e-12 65.9
MS.gene055351.t1 AT4G33450 33.621 116 61 2 10 110 17 131 1.70e-12 66.2
MS.gene055351.t1 AT5G40350 39.286 84 34 2 44 112 6 87 2.05e-12 64.3
MS.gene055351.t1 AT3G46130 41.667 72 27 1 44 100 21 92 3.00e-12 65.1
MS.gene055351.t1 AT1G66380 35.354 99 49 1 10 93 8 106 3.27e-12 63.2
MS.gene055351.t1 AT5G59780 41.667 72 27 1 44 100 21 92 3.35e-12 64.7
MS.gene055351.t1 AT1G56650 35.354 99 49 1 10 93 8 106 3.53e-12 65.1
MS.gene055351.t1 AT5G26660 41.667 72 27 1 44 100 15 86 5.25e-12 65.5
MS.gene055351.t1 AT1G73410 37.500 104 49 2 12 100 6 108 1.09e-11 63.5
MS.gene055351.t1 AT5G59780 47.368 57 30 0 53 109 1 57 1.13e-11 62.4
MS.gene055351.t1 AT1G73410 37.500 104 49 2 12 100 6 108 1.29e-11 62.8
MS.gene055351.t1 AT3G46130 50.000 48 24 0 53 100 1 48 1.61e-11 62.4
MS.gene055351.t1 AT3G12820 47.826 69 29 3 35 103 11 72 3.97e-11 61.2
MS.gene055351.t1 AT1G66390 34.343 99 50 2 10 93 8 106 4.87e-11 62.0

Find 57 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGTTCTTCCTGGTAAAT+AGG 0.261776 8.2:-83581884 None:intergenic
GTAAAATCAGTTTCGAGTTC+TGG 0.265895 8.2:-83582506 None:intergenic
ACAATGATGTCAAGAATTTC+TGG 0.266147 8.2:+83581905 MS.gene055351:CDS
ATAGAATTGCAGGAACAATT+TGG 0.279339 8.2:+83581838 MS.gene055351:CDS
ACATCATTGTCTGTTCTTCC+TGG 0.301376 8.2:-83581892 None:intergenic
TTCCGATCAAGTTATCAAAA+TGG 0.309350 8.2:+83582361 MS.gene055351:CDS
GATGAGGAACTGAACTTATA+CGG 0.338378 8.2:-83582284 None:intergenic
GAGGATTGTGATAGAATTGC+AGG 0.342837 8.2:+83581828 MS.gene055351:CDS
CCCTTGGAAACATCTGAGTT+TGG 0.377212 8.2:+83582578 MS.gene055351:CDS
CAAAATTTATTTGATGTGTT+TGG 0.378842 8.2:+83582554 MS.gene055351:CDS
CTTCATAATTCAGAGCTTAG+AGG 0.387043 8.2:-83582702 None:intergenic
AGGAACAATTTGGAAACAAA+TGG 0.388989 8.2:+83581848 MS.gene055351:CDS
TCAATGCATGGTAATGGATA+TGG 0.395866 8.2:-83582335 None:intergenic
AGTTCTTTGAAGAAGACCTT+TGG 0.401175 8.2:-83581004 None:intergenic
ATTTGATGTGTTTGGTCCCT+TGG 0.403712 8.2:+83582562 MS.gene055351:CDS
CGAATGGAGCTCCAATCTCT+TGG 0.416244 8.2:-83580979 None:intergenic
CTTTGATAGCTCTGATCAAA+AGG 0.418845 8.2:-83582455 None:intergenic
AAAGGTCTTCTTCAAAGAAC+TGG 0.425042 8.2:+83581006 MS.gene055351:CDS
ACGTAATTCGCATCGAAACT+AGG 0.435618 8.2:-83582416 None:intergenic
CTTCATCATGTGAAGAAGTA+TGG 0.445060 8.2:+83580955 MS.gene055351:CDS
AGAAGTATGGTCCAAGAGAT+TGG 0.451426 8.2:+83580968 MS.gene055351:CDS
TATCAAAATGGTTCCACTGT+TGG 0.461276 8.2:+83582373 MS.gene055351:CDS
ATGTGATCAAACATGTCCTC+TGG 0.462287 8.2:-83582662 None:intergenic
TGTTCATCAACTCTTTCCAT+TGG 0.465631 8.2:-83582533 None:intergenic
GAATTCTCAATGCATGGTAA+TGG 0.468729 8.2:-83582341 None:intergenic
AAGAAGACCTTTGGATCGAA+TGG 0.469841 8.2:-83580995 None:intergenic
TGGTAAATAGGATGCAATCT+TGG 0.487125 8.2:-83581872 None:intergenic
CGCATCGAAACTAGGTTGCT+CGG 0.492075 8.2:-83582408 None:intergenic
TGGAACACGGGAAGAAACTT+TGG 0.494230 8.2:-83582004 None:intergenic
GGAACAATTTGGAAACAAAT+GGG 0.516278 8.2:+83581849 MS.gene055351:CDS
AGAAAGATCAAGAGCACGTA+AGG 0.526200 8.2:+83580896 MS.gene055351:CDS
GTAGACAAAAGAGGTTGGCT+AGG 0.535031 8.2:+83581932 MS.gene055351:CDS
GGAAACATCTGAGTTTGGAA+TGG 0.540896 8.2:+83582583 MS.gene055351:CDS
TTTCTAATTACCTCGTGAGA+TGG 0.540939 8.2:-83582024 None:intergenic
TTTGATAGCTCTGATCAAAA+GGG 0.542008 8.2:-83582454 None:intergenic
TCTGGAGCAGTAGACAAAAG+AGG 0.552690 8.2:+83581923 MS.gene055351:CDS
AAGATTGCATCCTATTTACC+AGG 0.556707 8.2:+83581874 MS.gene055351:CDS
TTCATAATTCAGAGCTTAGA+GGG 0.556748 8.2:-83582701 None:intergenic
TCCAAACTCAGATGTTTCCA+AGG 0.561882 8.2:-83582579 None:intergenic
AGCACGTAAGGAAAGGTCCA+TGG 0.568999 8.2:+83580908 MS.gene055351:CDS
CATGGTAATGGATATGGTCG+AGG 0.569234 8.2:-83582329 None:intergenic
TGGAGCTCCATTCGATCCAA+AGG 0.580870 8.2:+83580988 MS.gene055351:CDS
TAAGTTCAGTTCCTCATCAG+AGG 0.591173 8.2:+83582289 MS.gene055351:CDS
TGATCGGAATTCTCAATGCA+TGG 0.593071 8.2:-83582347 None:intergenic
GTTTCGAGTTCTGGAATCTG+AGG 0.593864 8.2:-83582497 None:intergenic
AGTTTACAATCGAGGAAGAG+AGG 0.597675 8.2:+83581809 MS.gene055351:CDS
GATCAAGAGCACGTAAGGAA+AGG 0.598487 8.2:+83580901 MS.gene055351:CDS
GAGCAGTAGACAAAAGAGGT+TGG 0.607200 8.2:+83581927 MS.gene055351:CDS
TGATGCTTCTCCCTCTGATG+AGG 0.607465 8.2:-83582300 None:intergenic
AGCTTAGAGGGATTTGAATG+TGG 0.609877 8.2:-83582689 None:intergenic
TTCCCGTGTTCCATCTCACG+AGG 0.618226 8.2:+83582014 MS.gene055351:CDS
TTACCTCGTGAGATGGAACA+CGG 0.630234 8.2:-83582017 None:intergenic
AAGTTCAGTTCCTCATCAGA+GGG 0.631111 8.2:+83582290 MS.gene055351:CDS
CCAAACTCAGATGTTTCCAA+GGG 0.635161 8.2:-83582578 None:intergenic
TTGATAGCTCTGATCAAAAG+GGG 0.650518 8.2:-83582453 None:intergenic
TGGGTGCAAGTTTACAATCG+AGG 0.667952 8.2:+83581801 MS.gene055351:CDS
TACCTCGTGAGATGGAACAC+GGG 0.696461 8.2:-83582016 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAATTAATTATTTGAT+GGG + chr8.2:83581722-83581741 MS.gene055351:intron 10.0%
!!! AATTCTTATATTTTTATTGA+AGG + chr8.2:83582259-83582278 MS.gene055351:intron 10.0%
!! CATTCAAATTAATTATTTGA+TGG + chr8.2:83581721-83581740 MS.gene055351:intron 15.0%
!! TTAAAATTATAAACAATCGA+TGG - chr8.2:83581480-83581499 None:intergenic 15.0%
!!! CATCAAATAATTAATTTGAA+TGG - chr8.2:83581723-83581742 None:intergenic 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8.2:83582249-83582268 None:intergenic 15.0%
!!! TTAAATATTGAGTTTGAAAT+CGG - chr8.2:83582136-83582155 None:intergenic 15.0%
!! CAAAATTTATTTGATGTGTT+TGG + chr8.2:83582554-83582573 MS.gene055351:CDS 20.0%
!! TAAATATGAAATTTCCTTCA+CGG + chr8.2:83581365-83581384 MS.gene055351:intron 20.0%
!! TTATGAAAATTTACAACCAT+GGG + chr8.2:83581302-83581321 MS.gene055351:intron 20.0%
!! TTGGAAAATATAATTCGTTT+CGG + chr8.2:83581272-83581291 MS.gene055351:intron 20.0%
!! TTTATGAAAATTTACAACCA+TGG + chr8.2:83581301-83581320 MS.gene055351:intron 20.0%
!!! TAAGAATAACATACTTTTTG+AGG - chr8.2:83581074-83581093 None:intergenic 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8.2:83581764-83581783 MS.gene055351:intron 20.0%
! AAATATGAAATTTCCTTCAC+GGG + chr8.2:83581366-83581385 MS.gene055351:intron 25.0%
! ACTGATAATAACATGAGAAA+CGG - chr8.2:83581565-83581584 None:intergenic 25.0%
! TAACACACTTACATAATACA+CGG + chr8.2:83581497-83581516 MS.gene055351:intron 25.0%
! TATGAAAATTTACAACCATG+GGG + chr8.2:83581303-83581322 MS.gene055351:intron 25.0%
!!! AACCATTTTGATAACTTGAT+CGG - chr8.2:83582366-83582385 None:intergenic 25.0%
!!! AGTTGTTTTAAGTGTATGTT+TGG + chr8.2:83581682-83581701 MS.gene055351:intron 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8.2:83581069-83581088 None:intergenic 25.0%
ACAATGATGTCAAGAATTTC+TGG + chr8.2:83581905-83581924 MS.gene055351:CDS 30.0%
AGGAACAATTTGGAAACAAA+TGG + chr8.2:83581848-83581867 MS.gene055351:CDS 30.0%
ATAAACAATCGATGGAGAAT+AGG - chr8.2:83581472-83581491 None:intergenic 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8.2:83581838-83581857 MS.gene055351:CDS 30.0%
GAGGTAATTAGAAAACACAA+AGG + chr8.2:83582033-83582052 MS.gene055351:intron 30.0%
GATACAAAGATGGAGTAAAT+TGG + chr8.2:83581655-83581674 MS.gene055351:intron 30.0%
GGAACAATTTGGAAACAAAT+GGG + chr8.2:83581849-83581868 MS.gene055351:CDS 30.0%
TCACTAATCACTTGTAGTAA+AGG - chr8.2:83581411-83581430 None:intergenic 30.0%
TCTTGTCCTTTCTTCTAATT+CGG + chr8.2:83582066-83582085 MS.gene055351:intron 30.0%
TGTCAGACATATCAATGTTT+CGG - chr8.2:83581177-83581196 None:intergenic 30.0%
TTCCGATCAAGTTATCAAAA+TGG + chr8.2:83582361-83582380 MS.gene055351:CDS 30.0%
! TTTTCGTGATGATACAAAGA+TGG + chr8.2:83581645-83581664 MS.gene055351:intron 30.0%
!! AACTGATTTTACGTTTCCAA+TGG + chr8.2:83582517-83582536 MS.gene055351:CDS 30.0%
!! AATGTTTTTGCTTCATTGCT+TGG + chr8.2:83581253-83581272 MS.gene055351:intron 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8.2:83582646-83582665 MS.gene055351:CDS 30.0%
!! TTTGATAGCTCTGATCAAAA+GGG - chr8.2:83582457-83582476 None:intergenic 30.0%
!!! GATTTTTTAAGATCCAACAG+TGG - chr8.2:83582389-83582408 None:intergenic 30.0%
!!! TTTGATGGGTTTTCATTGAT+TGG + chr8.2:83581736-83581755 MS.gene055351:intron 30.0%
!!! TTTGTTTTTGTGTGACTTTG+AGG - chr8.2:83581983-83582002 None:intergenic 30.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8.2:83581006-83581025 MS.gene055351:CDS 35.0%
AACGGAATAAATGAATGCGT+CGG - chr8.2:83581547-83581566 None:intergenic 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8.2:83581874-83581893 MS.gene055351:CDS 35.0%
AGTAGTCGTTGGATCAAAAT+TGG + chr8.2:83582104-83582123 MS.gene055351:intron 35.0%
ATCTTCTGATCCTGATCTAA+CGG + chr8.2:83582178-83582197 MS.gene055351:intron 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8.2:83580955-83580974 MS.gene055351:CDS 35.0%
CTTGTCCTTTCTTCTAATTC+GGG + chr8.2:83582067-83582086 MS.gene055351:intron 35.0%
GAATTCTCAATGCATGGTAA+TGG - chr8.2:83582344-83582363 None:intergenic 35.0%
GATGAGGAACTGAACTTATA+CGG - chr8.2:83582287-83582306 None:intergenic 35.0%
TATCAAAATGGTTCCACTGT+TGG + chr8.2:83582373-83582392 MS.gene055351:CDS 35.0%
TGGTAAATAGGATGCAATCT+TGG - chr8.2:83581875-83581894 None:intergenic 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8.2:83582536-83582555 None:intergenic 35.0%
TTTCTAATTACCTCGTGAGA+TGG - chr8.2:83582027-83582046 None:intergenic 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8.2:83581007-83581026 None:intergenic 35.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8.2:83580928-83580947 None:intergenic 35.0%
!! CTTTGATAGCTCTGATCAAA+AGG - chr8.2:83582458-83582477 None:intergenic 35.0%
!! GTAAAATCAGTTTCGAGTTC+TGG - chr8.2:83582509-83582528 None:intergenic 35.0%
!! TCAATGCATGGTAATGGATA+TGG - chr8.2:83582338-83582357 None:intergenic 35.0%
!! TTGATAGCTCTGATCAAAAG+GGG - chr8.2:83582456-83582475 None:intergenic 35.0%
!!! TCAATTTTGAAACTCCCTGA+TGG - chr8.2:83582623-83582642 None:intergenic 35.0%
!!! TTCCTTTTTTTGAGCCATCA+GGG + chr8.2:83582606-83582625 MS.gene055351:CDS 35.0%
AAAAATGAGACAACCCGTGA+AGG - chr8.2:83581382-83581401 None:intergenic 40.0%
AACATTAAGAAGCAACCCCA+TGG - chr8.2:83581321-83581340 None:intergenic 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8.2:83580998-83581017 None:intergenic 40.0%
AAGTTCAGTTCCTCATCAGA+GGG + chr8.2:83582290-83582309 MS.gene055351:CDS 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8.2:83581895-83581914 None:intergenic 40.0%
ACGTAATTCGCATCGAAACT+AGG - chr8.2:83582419-83582438 None:intergenic 40.0%
AGCTTAGAGGGATTTGAATG+TGG - chr8.2:83582692-83582711 None:intergenic 40.0%
AGTTTACAATCGAGGAAGAG+AGG + chr8.2:83581809-83581828 MS.gene055351:CDS 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8.2:83582665-83582684 None:intergenic 40.0%
ATTTGATGTGTTTGGTCCCT+TGG + chr8.2:83582562-83582581 MS.gene055351:CDS 40.0%
CCAAACTCAGATGTTTCCAA+GGG - chr8.2:83582581-83582600 None:intergenic 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8.2:83581828-83581847 MS.gene055351:CDS 40.0%
GGAAACATCTGAGTTTGGAA+TGG + chr8.2:83582583-83582602 MS.gene055351:CDS 40.0%
GTAGCACACAACACAAACAT+TGG - chr8.2:83581615-83581634 None:intergenic 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8.2:83581887-83581906 None:intergenic 40.0%
TAAGTTCAGTTCCTCATCAG+AGG + chr8.2:83582289-83582308 MS.gene055351:CDS 40.0%
TCCAAACTCAGATGTTTCCA+AGG - chr8.2:83582582-83582601 None:intergenic 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8.2:83582350-83582369 None:intergenic 40.0%
! AGAAAGATCAAGAGCACGTA+AGG + chr8.2:83580896-83580915 MS.gene055351:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8.2:83580968-83580987 MS.gene055351:CDS 40.0%
!! CACGGGTTGTCTCATTTTTA+TGG + chr8.2:83581383-83581402 MS.gene055351:intron 40.0%
!!! GTTCCTTTTTTTGAGCCATC+AGG + chr8.2:83582605-83582624 MS.gene055351:CDS 40.0%
AATTCGTTCCCGCATTCAAG+CGG - chr8.2:83582220-83582239 None:intergenic 45.0%
ACATATGCAGCCGTTAGATC+AGG - chr8.2:83582191-83582210 None:intergenic 45.0%
CCCTTGGAAACATCTGAGTT+TGG + chr8.2:83582578-83582597 MS.gene055351:CDS 45.0%
CTCCCTGATGGCTCAAAAAA+AGG - chr8.2:83582611-83582630 None:intergenic 45.0%
GAGCAGTAGACAAAAGAGGT+TGG + chr8.2:83581927-83581946 MS.gene055351:CDS 45.0%
TGATCCAACGACTACTGATG+TGG - chr8.2:83582100-83582119 None:intergenic 45.0%
TGGAACACGGGAAGAAACTT+TGG - chr8.2:83582007-83582026 None:intergenic 45.0%
TGGGTGCAAGTTTACAATCG+AGG + chr8.2:83581801-83581820 MS.gene055351:CDS 45.0%
TGTAACTTCCCGCTTGAATG+CGG + chr8.2:83582208-83582227 MS.gene055351:intron 45.0%
TTACCTCGTGAGATGGAACA+CGG - chr8.2:83582020-83582039 None:intergenic 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8.2:83581029-83581048 MS.gene055351:intron 45.0%
! GATCAAGAGCACGTAAGGAA+AGG + chr8.2:83580901-83580920 MS.gene055351:CDS 45.0%
! GTAGACAAAAGAGGTTGGCT+AGG + chr8.2:83581932-83581951 MS.gene055351:CDS 45.0%
! TCTGGAGCAGTAGACAAAAG+AGG + chr8.2:83581923-83581942 MS.gene055351:CDS 45.0%
! TCTGGTCTCTCTCTGAAAGT+GGG + chr8.2:83581782-83581801 MS.gene055351:intron 45.0%
! TTCTGGTCTCTCTCTGAAAG+TGG + chr8.2:83581781-83581800 MS.gene055351:intron 45.0%
!! CATGGTAATGGATATGGTCG+AGG - chr8.2:83582332-83582351 None:intergenic 45.0%
!! GTTTCGAGTTCTGGAATCTG+AGG - chr8.2:83582500-83582519 None:intergenic 45.0%
AACGACTACTGATGTGGCTG+AGG - chr8.2:83582094-83582113 None:intergenic 50.0%
ACGACTACTGATGTGGCTGA+GGG - chr8.2:83582093-83582112 None:intergenic 50.0%
AGCACGTAAGGAAAGGTCCA+TGG + chr8.2:83580908-83580927 MS.gene055351:CDS 50.0%
ATTCGTTCCCGCATTCAAGC+GGG - chr8.2:83582219-83582238 None:intergenic 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8.2:83580982-83581001 None:intergenic 50.0%
CGCATCGAAACTAGGTTGCT+CGG - chr8.2:83582411-83582430 None:intergenic 50.0%
GAGGGCCCGAATTAGAAGAA+AGG - chr8.2:83582075-83582094 None:intergenic 50.0%
GTAACTTCCCGCTTGAATGC+GGG + chr8.2:83582209-83582228 MS.gene055351:intron 50.0%
TACCTCGTGAGATGGAACAC+GGG - chr8.2:83582019-83582038 None:intergenic 50.0%
TCAGCCACATCAGTAGTCGT+TGG + chr8.2:83582093-83582112 MS.gene055351:intron 50.0%
TGATGCTTCTCCCTCTGATG+AGG - chr8.2:83582303-83582322 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8.2:83580988-83581007 MS.gene055351:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8.2:83581028-83581047 MS.gene055351:intron 50.0%
TTCCCGTGTTCCATCTCACG+AGG + chr8.2:83582014-83582033 MS.gene055351:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 83580886 83582715 83580886 ID=MS.gene055351
chr8.2 mRNA 83580886 83582715 83580886 ID=MS.gene055351.t1;Parent=MS.gene055351
chr8.2 exon 83580886 83581031 83580886 ID=MS.gene055351.t1.exon1;Parent=MS.gene055351.t1
chr8.2 CDS 83580886 83581031 83580886 ID=cds.MS.gene055351.t1;Parent=MS.gene055351.t1
chr8.2 exon 83581801 83582035 83581801 ID=MS.gene055351.t1.exon2;Parent=MS.gene055351.t1
chr8.2 CDS 83581801 83582035 83581801 ID=cds.MS.gene055351.t1;Parent=MS.gene055351.t1
chr8.2 exon 83582281 83582715 83582281 ID=MS.gene055351.t1.exon3;Parent=MS.gene055351.t1
chr8.2 CDS 83582281 83582715 83582281 ID=cds.MS.gene055351.t1;Parent=MS.gene055351.t1
Gene Sequence

>MS.gene055351

ATGCATGGGAAGAAAGATCAAGAGCACGTAAGGAAAGGTCCATGGAAAACAGAAGAAGATGAAGTGTTACTTCATCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTCTTCAAAGAACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAACTTCGACCAAACCTCAAAAAGTATGTTATTCTTACTTCATTTTCATTTCTCTTCTCATTATAGTATTTATTTTTTTTTCTTGTAATTTCAATCTATGAAACATAGACTCATACACCGAAACATTGATATGTCTGACACTGAAAATTATTTGAGAATGAAATTATGTGTCGTAGTGCACACACATTCGATTTGAAATGTTTTTGCTTCATTGCTTGGAAAATATAATTCGTTTCGGTGTTGTTTTATGAAAATTTACAACCATGGGGTTGCTTCTTAATGTTACAAGTCTTTAATTTTTTCAATTTTAAATATGAAATTTCCTTCACGGGTTGTCTCATTTTTATGGAACCTTTACTACAAGTGATTAGTGAAGTTTCTTCTCTTTGATATATAGTATTATATTATGTATCCTATTCTCCATCGATTGTTTATAATTTTAACACACTTACATAATACACGGTGTAGCACTAACATTGTTAAGTGTCCGACGCATTCATTTATTCCGTTTCTCATGTTATTATCAGTGTCAACACGTCTGTCTCAATGTCATGTCCAATGTTTGTGTTGTGTGCTACTTATTTGTACTTTTCGTGATGATACAAAGATGGAGTAAATTGGTTTAAGTTGTTTTAAGTGTATGTTTGGTTACTTAAGTTTACACCATTCAAATTAATTATTTGATGGGTTTTCATTGATTGGTTTATTTATTTGATTTTTGTGTTTCTGGTCTCTCTCTGAAAGTGGGTGCAAGTTTACAATCGAGGAAGAGAGGATTGTGATAGAATTGCAGGAACAATTTGGAAACAAATGGGCCAAGATTGCATCCTATTTACCAGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGACAAAAGAGGTTGGCTAGGCTTCTCAAAACATCATCGTCAACAACCTCAAAGTCACACAAAAACAAAGCCAAAGTTTCTTCCCGTGTTCCATCTCACGAGGTAATTAGAAAACACAAAGGTTACTCTTTTTCTTGTCCTTTCTTCTAATTCGGGCCCTCAGCCACATCAGTAGTCGTTGGATCAAAATTGGACAATGCCGATTTCAAACTCAATATTTAATTTTTTAAATATAAAAATATGCATCTTCTGATCCTGATCTAACGGCTGCATATGTAACTTCCCGCTTGAATGCGGGAACGAATTCTCATTCCGTTTTCTCTAAAATTCTTATATTTTTATTGAAGGTTCCGTATAAGTTCAGTTCCTCATCAGAGGGAGAAGCATCATCAAAACCTCGACCATATCCATTACCATGCATTGAGAATTCCGATCAAGTTATCAAAATGGTTCCACTGTTGGATCTTAAAAAATCCGAGCAACCTAGTTTCGATGCGAATTACGTTGAACAAGAGTTCACCCCTTTTGATCAGAGCTATCAAAGCACTGAACACATTGCATTTCCTCAGATTCCAGAACTCGAAACTGATTTTACGTTTCCAATGGAAAGAGTTGATGAACAAAATTTATTTGATGTGTTTGGTCCCTTGGAAACATCTGAGTTTGGAATGGTTCCTTTTTTTGAGCCATCAGGGAGTTTCAAAATTGATAATTTCTTTGATGATTTTCCAGAGGACATGTTTGATCACATTGAGCCACATTCAAATCCCTCTAAGCTCTGA
Protein sequence

>MS.gene055351.t1

MHGKKDQEHVRKGPWKTEEDEVLLHHVKKYGPRDWSSIRSKGLLQRTGNGCKFTIEEERIVIELQEQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRLARLLKTSSSTTSKSHKNKAKVSSRVPSHEVPYKFSSSSEGEASSKPRPYPLPCIENSDQVIKMVPLLDLKKSEQPSFDANYVEQEFTPFDQSYQSTEHIAFPQIPELETDFTFPMERVDEQNLFDVFGPLETSEFGMVPFFEPSGSFKIDNFFDDFPEDMFDHIEPHSNPSKL