Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055366.t1 | PNX73002.1 | 42.7 | 854 | 184 | 9 | 105 | 742 | 1 | 765 | 4.40E-161 | 578.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055366.t1 | Q9LKR4 | 32.8 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 5.7e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055366.t1 | A0A2K3L384 | 42.7 | 854 | 184 | 9 | 105 | 742 | 1 | 765 | 3.2e-161 | 578.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055366.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055366.t1 | MTR_3g080590 | 84.516 | 155 | 20 | 1 | 1 | 151 | 1 | 155 | 2.09e-76 | 244 |
| MS.gene055366.t1 | MTR_7g446520 | 45.078 | 193 | 91 | 2 | 94 | 286 | 81 | 258 | 1.26e-43 | 161 |
| MS.gene055366.t1 | MTR_0645s0010 | 67.593 | 108 | 29 | 3 | 284 | 391 | 24 | 125 | 8.04e-35 | 129 |
| MS.gene055366.t1 | MTR_7g446480 | 50.893 | 112 | 55 | 0 | 175 | 286 | 140 | 251 | 2.78e-30 | 122 |
| MS.gene055366.t1 | MTR_7g028855 | 42.384 | 151 | 84 | 1 | 94 | 241 | 113 | 263 | 3.35e-28 | 119 |
| MS.gene055366.t1 | MTR_7g446510 | 50.000 | 112 | 56 | 0 | 175 | 286 | 155 | 266 | 7.76e-28 | 115 |
| MS.gene055366.t1 | MTR_5g076070 | 28.916 | 166 | 115 | 2 | 98 | 260 | 50 | 215 | 3.96e-19 | 89.0 |
| MS.gene055366.t1 | MTR_1g070355 | 31.250 | 176 | 118 | 2 | 101 | 273 | 74 | 249 | 5.45e-19 | 91.7 |
| MS.gene055366.t1 | MTR_6g022080 | 25.294 | 170 | 124 | 1 | 94 | 260 | 78 | 247 | 3.04e-16 | 79.7 |
| MS.gene055366.t1 | MTR_8g035530 | 45.455 | 77 | 40 | 1 | 88 | 164 | 1 | 75 | 1.12e-15 | 72.8 |
| MS.gene055366.t1 | MTR_3g450850 | 29.651 | 172 | 109 | 4 | 107 | 266 | 53 | 224 | 2.20e-12 | 69.7 |
| MS.gene055366.t1 | MTR_8g468460 | 41.000 | 100 | 56 | 2 | 305 | 404 | 9 | 105 | 2.54e-12 | 64.3 |
| MS.gene055366.t1 | MTR_0402s0040 | 28.736 | 174 | 119 | 5 | 104 | 274 | 29 | 200 | 1.96e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055366.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 3.71e-17 | 86.3 |
| MS.gene055366.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 3.78e-17 | 86.3 |
| MS.gene055366.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.17e-17 | 86.3 |
| MS.gene055366.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.29e-17 | 86.3 |
| MS.gene055366.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.29e-17 | 86.3 |
| MS.gene055366.t1 | AT4G38180 | 28.986 | 207 | 133 | 5 | 248 | 449 | 441 | 638 | 5.32e-17 | 86.3 |
| MS.gene055366.t1 | AT4G38180 | 30.403 | 273 | 167 | 11 | 23 | 286 | 4 | 262 | 9.29e-13 | 72.4 |
| MS.gene055366.t1 | AT4G15090 | 30.047 | 213 | 140 | 5 | 284 | 495 | 452 | 656 | 2.51e-16 | 84.0 |
| MS.gene055366.t1 | AT4G15090 | 30.047 | 213 | 140 | 5 | 284 | 495 | 452 | 656 | 2.51e-16 | 84.0 |
| MS.gene055366.t1 | AT4G15090 | 30.047 | 213 | 140 | 5 | 284 | 495 | 452 | 656 | 2.51e-16 | 84.0 |
| MS.gene055366.t1 | AT4G15090 | 30.047 | 213 | 140 | 5 | 284 | 495 | 452 | 656 | 2.51e-16 | 84.0 |
| MS.gene055366.t1 | AT4G15090 | 30.047 | 213 | 140 | 5 | 284 | 495 | 452 | 656 | 2.51e-16 | 84.0 |
| MS.gene055366.t1 | AT3G22170 | 27.232 | 224 | 152 | 5 | 284 | 504 | 461 | 676 | 2.41e-15 | 80.9 |
| MS.gene055366.t1 | AT3G22170 | 27.232 | 224 | 152 | 5 | 284 | 504 | 461 | 676 | 2.41e-15 | 80.9 |
| MS.gene055366.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 386 | 613 | 8.74e-15 | 79.0 |
| MS.gene055366.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 386 | 613 | 8.74e-15 | 79.0 |
| MS.gene055366.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 241 | 468 | 9.81e-15 | 78.6 |
| MS.gene055366.t1 | AT4G38170 | 25.773 | 194 | 136 | 4 | 256 | 445 | 210 | 399 | 1.89e-14 | 77.4 |
| MS.gene055366.t1 | AT1G76320 | 25.556 | 180 | 124 | 4 | 273 | 448 | 374 | 547 | 5.75e-11 | 66.6 |
| MS.gene055366.t1 | AT1G76320 | 25.556 | 180 | 124 | 4 | 273 | 448 | 374 | 547 | 5.86e-11 | 66.6 |
| MS.gene055366.t1 | AT1G76320 | 25.556 | 180 | 124 | 4 | 273 | 448 | 374 | 547 | 5.86e-11 | 66.6 |
| MS.gene055366.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 9.44e-11 | 65.9 |
| MS.gene055366.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 9.44e-11 | 65.9 |
Find 138 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGTTGATTGTGATATT+TGG | 0.171428 | 8.1:-87090532 | None:intergenic |
| AAAACTGATCCACCATTATT+TGG | 0.189323 | 8.1:-87090769 | None:intergenic |
| CTCTTGCAAATCAGACTTTC+AGG | 0.192125 | 8.1:-87089743 | None:intergenic |
| CCCATAGTTTCTCAATGTTT+TGG | 0.242135 | 8.1:-87091026 | None:intergenic |
| TCACTCAATTTGCTGTAATT+AGG | 0.275503 | 8.1:-87088444 | None:intergenic |
| AAATGATGATATAAGGGATA+TGG | 0.309095 | 8.1:+87088107 | MS.gene055366:CDS |
| TAACACCATACCCAACATTA+TGG | 0.313783 | 8.1:-87090720 | None:intergenic |
| AGGACTTGGGTTTATCAAAA+AGG | 0.326599 | 8.1:+87088560 | MS.gene055366:CDS |
| TGATAAACCCAAGTCCTTCA+TGG | 0.346028 | 8.1:-87088554 | None:intergenic |
| ATGTGACAAATGATGATATA+AGG | 0.351919 | 8.1:+87088100 | MS.gene055366:CDS |
| ACGACTTTGTTCGTACGATT+TGG | 0.356788 | 8.1:+87088355 | MS.gene055366:CDS |
| ACACCAATTCCAGCAAGTTC+TGG | 0.360337 | 8.1:-87090151 | None:intergenic |
| TAAGAGCGCAAGTGATTATA+AGG | 0.371814 | 8.1:+87089895 | MS.gene055366:CDS |
| AACAACGATGTTCGTATTGA+TGG | 0.384308 | 8.1:+87087988 | MS.gene055366:CDS |
| CACTATGGGCTGCCAAATAA+TGG | 0.387380 | 8.1:+87090757 | MS.gene055366:CDS |
| TGTAAGAACATGTCATATCT+TGG | 0.387474 | 8.1:+87088506 | MS.gene055366:CDS |
| TGTTCTAATTGTAGAAATCC+TGG | 0.392101 | 8.1:+87090109 | MS.gene055366:CDS |
| ATCCATGTTGTCATACTTCA+TGG | 0.394339 | 8.1:-87089714 | None:intergenic |
| ATCATTCGCAACAAATTTGT+TGG | 0.403036 | 8.1:-87090023 | None:intergenic |
| TCTAACACTGCTCTGCATAC+TGG | 0.407068 | 8.1:+87090829 | MS.gene055366:CDS |
| ATATAATTTCACGGATCATC+AGG | 0.409639 | 8.1:+87088587 | MS.gene055366:CDS |
| GATTATAAGGAGGCTCTAGA+AGG | 0.413898 | 8.1:+87089908 | MS.gene055366:CDS |
| GATTCATTATCAGACTCAAT+AGG | 0.414121 | 8.1:-87090205 | None:intergenic |
| GCACTGGTATTACACGTAAG+AGG | 0.418801 | 8.1:+87090413 | MS.gene055366:CDS |
| AACAAATACAAGCACTAGAA+AGG | 0.422563 | 8.1:+87090492 | MS.gene055366:CDS |
| TGTCCAGAACTTGCTGGAAT+TGG | 0.422787 | 8.1:+87090148 | MS.gene055366:CDS |
| TGCTGTAATTAGGCATCAAA+TGG | 0.427394 | 8.1:-87088434 | None:intergenic |
| AAAGTTTAAAGATGTCAAAA+AGG | 0.436388 | 8.1:+87089493 | MS.gene055366:CDS |
| AAGGGTGGCCATGAAGGACT+TGG | 0.449428 | 8.1:+87088546 | MS.gene055366:CDS |
| TAAATTTGTTGCGAGTGATA+AGG | 0.460501 | 8.1:+87090000 | MS.gene055366:CDS |
| AAATGGACATGACAAGGATA+AGG | 0.461918 | 8.1:+87089973 | MS.gene055366:CDS |
| GTAAGAACATGTCATATCTT+GGG | 0.464989 | 8.1:+87088507 | MS.gene055366:CDS |
| GCGTCAATTAGTATGCAATA+AGG | 0.467578 | 8.1:+87088242 | MS.gene055366:CDS |
| AACGCAAAGGAGCTAATTCA+TGG | 0.469712 | 8.1:-87088407 | None:intergenic |
| TTCGAATGGTTAGCGTAGAT+CGG | 0.471186 | 8.1:-87088302 | None:intergenic |
| AATAGCCGTCATGAGGGAAA+TGG | 0.477370 | 8.1:+87089956 | MS.gene055366:CDS |
| CAAGGGAAAGAGAACTTTGA+TGG | 0.478759 | 8.1:+87088060 | MS.gene055366:CDS |
| CGGACGTGTCCAGAACTTGC+TGG | 0.483560 | 8.1:+87090142 | MS.gene055366:CDS |
| TGCAGAACAATTAGTTCGAA+TGG | 0.488516 | 8.1:-87088316 | None:intergenic |
| ATGTGAAACGTGATTCTAAT+GGG | 0.492055 | 8.1:+87088208 | MS.gene055366:CDS |
| AAAGGACTTATATAATTTCA+CGG | 0.493961 | 8.1:+87088578 | MS.gene055366:CDS |
| GAAATCCTGGGCACACAATA+CGG | 0.497533 | 8.1:+87090122 | MS.gene055366:CDS |
| CACTCTGTAGCAGTGTCAAA+TGG | 0.499398 | 8.1:+87090370 | MS.gene055366:CDS |
| AATGGACATGACAAGGATAA+GGG | 0.502443 | 8.1:+87089974 | MS.gene055366:CDS |
| AGTGTTAGAATGTGATGAGA+GGG | 0.502952 | 8.1:-87090815 | None:intergenic |
| CCACTGGTTTGAAGTAAGAA+AGG | 0.504797 | 8.1:+87088182 | MS.gene055366:CDS |
| AATGGTGTGACCCGTGACTT+TGG | 0.505092 | 8.1:+87090649 | MS.gene055366:CDS |
| GCAAGGGTTAAAATACAAGA+TGG | 0.508614 | 8.1:+87088609 | MS.gene055366:CDS |
| GTATCACTATATACATCAAA+AGG | 0.509968 | 8.1:-87087841 | None:intergenic |
| GGTCAAAAGGGTGGCCATGA+AGG | 0.510809 | 8.1:+87088540 | MS.gene055366:CDS |
| TGTGATGAGAGGGTAGTTGT+CGG | 0.513549 | 8.1:-87090805 | None:intergenic |
| GATGTGAAACGTGATTCTAA+TGG | 0.514927 | 8.1:+87088207 | MS.gene055366:CDS |
| TATTATTTGCAAAATACCAC+TGG | 0.520141 | 8.1:+87088166 | MS.gene055366:CDS |
| ATTTAGTCTGCAACTTGTCA+AGG | 0.524883 | 8.1:-87089631 | None:intergenic |
| CAAGGGTTAAAATACAAGAT+GGG | 0.527779 | 8.1:+87088610 | MS.gene055366:CDS |
| AAAGTCTGATTTGCAAGAGA+TGG | 0.531904 | 8.1:+87089747 | MS.gene055366:CDS |
| GTTCTAATTGTAGAAATCCT+GGG | 0.533951 | 8.1:+87090110 | MS.gene055366:CDS |
| AAGTGCCCCTCGACGAAACA+TGG | 0.534361 | 8.1:-87089837 | None:intergenic |
| CACGTCCGTATTGTGTGCCC+AGG | 0.534840 | 8.1:-87090127 | None:intergenic |
| ACAAATACAAGCACTAGAAA+GGG | 0.535750 | 8.1:+87090493 | MS.gene055366:CDS |
| GTAGTTGTCGGAGGGAATTG+TGG | 0.539742 | 8.1:-87090793 | None:intergenic |
| TGTGACAAATGATGATATAA+GGG | 0.541240 | 8.1:+87088101 | MS.gene055366:CDS |
| AATAAGGAGGGTGTTAATGA+TGG | 0.543414 | 8.1:+87088258 | MS.gene055366:CDS |
| AAGACAGCCATTGTGCAAGT+TGG | 0.545484 | 8.1:+87090695 | MS.gene055366:CDS |
| AGCTAATTCATGGTTGTGAG+AGG | 0.545517 | 8.1:-87088397 | None:intergenic |
| TATGAGTGCGTTGAAGATTG+TGG | 0.547437 | 8.1:+87090968 | MS.gene055366:CDS |
| ACTTCATGGCACAAATAATG+TGG | 0.547507 | 8.1:-87089700 | None:intergenic |
| TCGTCATTTGCCTCCCAAGA+AGG | 0.555407 | 8.1:+87089797 | MS.gene055366:CDS |
| CACTGGTATTACACGTAAGA+GGG | 0.559146 | 8.1:+87090414 | MS.gene055366:CDS |
| GGTGTCGTGTCTGAAGATCA+AGG | 0.560464 | 8.1:+87090169 | MS.gene055366:CDS |
| CAGTGTTAGAATGTGATGAG+AGG | 0.563750 | 8.1:-87090816 | None:intergenic |
| CGAGATGTTGAGAAAAGCAC+TGG | 0.563759 | 8.1:+87090397 | MS.gene055366:CDS |
| TTCATCATTACCTTCTTGGG+AGG | 0.565482 | 8.1:-87089807 | None:intergenic |
| GTCTGAAGATCAAGGGGAGA+AGG | 0.567087 | 8.1:+87090177 | MS.gene055366:CDS |
| CCTTTGACATTCACCATCAG+TGG | 0.574175 | 8.1:-87090046 | None:intergenic |
| GTGGAATTTAACCATGGTAA+TGG | 0.576772 | 8.1:+87088024 | MS.gene055366:CDS |
| GCACAAATAATGTGGGAACA+TGG | 0.578248 | 8.1:-87089692 | None:intergenic |
| AAATGACCATGTTTCGTCGA+GGG | 0.581274 | 8.1:+87089831 | MS.gene055366:CDS |
| GTGTCGTGTCTGAAGATCAA+GGG | 0.581492 | 8.1:+87090170 | MS.gene055366:CDS |
| GCTAATTCATGGTTGTGAGA+GGG | 0.581523 | 8.1:-87088396 | None:intergenic |
| TCAATTAGTATGCAATAAGG+AGG | 0.584633 | 8.1:+87088245 | MS.gene055366:CDS |
| AATGACCATGTTTCGTCGAG+GGG | 0.585541 | 8.1:+87089832 | MS.gene055366:CDS |
| GCAAGTTGGAACCATAATGT+TGG | 0.585606 | 8.1:+87090709 | MS.gene055366:CDS |
| TAAGATAAATAGCCGTCATG+AGG | 0.585792 | 8.1:+87089949 | MS.gene055366:CDS |
| AGGGTGGCCATGAAGGACTT+GGG | 0.586883 | 8.1:+87088547 | MS.gene055366:CDS |
| GAAGCTTCAAAGATATTCAC+CGG | 0.587720 | 8.1:+87089467 | MS.gene055366:CDS |
| AAGATAAATAGCCGTCATGA+GGG | 0.587755 | 8.1:+87089950 | MS.gene055366:CDS |
| ATACTCACCGGTGTATAACT+CGG | 0.588936 | 8.1:-87090865 | None:intergenic |
| ATGAGAGGGTAGTTGTCGGA+GGG | 0.591320 | 8.1:-87090801 | None:intergenic |
| CATGTCCATTTCCCTCATGA+CGG | 0.591948 | 8.1:-87089961 | None:intergenic |
| ATTTCACGGATCATCAGGCA+AGG | 0.592596 | 8.1:+87088592 | MS.gene055366:CDS |
| TGGAACCATAATGTTGGGTA+TGG | 0.594448 | 8.1:+87090715 | MS.gene055366:CDS |
| CTTCATGGCACAAATAATGT+GGG | 0.594948 | 8.1:-87089699 | None:intergenic |
| GCTACTTTGAGTTATTTCCA+AGG | 0.596592 | 8.1:+87088642 | MS.gene055366:CDS |
| CAAGTTGGAACCATAATGTT+GGG | 0.599464 | 8.1:+87090710 | MS.gene055366:CDS |
| CCTTTCTTACTTCAAACCAG+TGG | 0.606619 | 8.1:-87088182 | None:intergenic |
| GTCAATGCAGTTGTCAGCAT+AGG | 0.607551 | 8.1:-87089431 | None:intergenic |
| ATATAGTGATACAGATGAGG+TGG | 0.607738 | 8.1:+87087852 | MS.gene055366:CDS |
| AAGGGTTAAAATACAAGATG+GGG | 0.610552 | 8.1:+87088611 | MS.gene055366:CDS |
| AAACATCGCAGTGACTATTG+TGG | 0.611836 | 8.1:+87091002 | MS.gene055366:CDS |
| ATTATAAGGAGGCTCTAGAA+GGG | 0.613050 | 8.1:+87089909 | MS.gene055366:CDS |
| GACACTGATAGTGATACAGA+TGG | 0.614810 | 8.1:+87087898 | MS.gene055366:CDS |
| TTAGAACAACATCTTGTCCT+CGG | 0.616961 | 8.1:-87090094 | None:intergenic |
| GTTGATAAACAAGTTGCTAG+TGG | 0.617676 | 8.1:+87088468 | MS.gene055366:CDS |
| TGATAGTGATACAGATGGGG+TGG | 0.618742 | 8.1:+87087903 | MS.gene055366:CDS |
| GATGAGAGGGTAGTTGTCGG+AGG | 0.619255 | 8.1:-87090802 | None:intergenic |
| CCACTGATGGTGAATGTCAA+AGG | 0.624002 | 8.1:+87090046 | MS.gene055366:CDS |
| TATGGTTCCAACTTGCACAA+TGG | 0.627946 | 8.1:-87090702 | None:intergenic |
| GAACGAGATGAAGATGTGGA+TGG | 0.628845 | 8.1:+87089548 | MS.gene055366:CDS |
| TTTCACGGATCATCAGGCAA+GGG | 0.637022 | 8.1:+87088593 | MS.gene055366:CDS |
| CATTGCAAACACCATTACCA+TGG | 0.642035 | 8.1:-87088035 | None:intergenic |
| TATGGGCTGCCAAATAATGG+TGG | 0.644398 | 8.1:+87090760 | MS.gene055366:CDS |
| AATGGTGTTTGCAATGAGCA+AGG | 0.648235 | 8.1:+87088042 | MS.gene055366:CDS |
| GCTAGTGGTCTACATTCGCA+AGG | 0.649023 | 8.1:+87088483 | MS.gene055366:CDS |
| ATCAAATGGACAAAACGCAA+AGG | 0.651947 | 8.1:-87088420 | None:intergenic |
| AAAATGACCATGTTTCGTCG+AGG | 0.652304 | 8.1:+87089830 | MS.gene055366:CDS |
| TGAGGGAAATGGACATGACA+AGG | 0.654599 | 8.1:+87089967 | MS.gene055366:CDS |
| CATTGAACGAGATGAAGATG+TGG | 0.655902 | 8.1:+87089544 | MS.gene055366:CDS |
| ATGGTGTTTGCAATGAGCAA+GGG | 0.657603 | 8.1:+87088043 | MS.gene055366:CDS |
| TCTGTAGCAGTGTCAAATGG+TGG | 0.657609 | 8.1:+87090373 | MS.gene055366:CDS |
| TGATGGAGATGCAGACGGTG+TGG | 0.658848 | 8.1:+87088005 | MS.gene055366:CDS |
| ACACTGATAGTGATACAGAT+GGG | 0.663559 | 8.1:+87087899 | MS.gene055366:CDS |
| TGTCGTGTCTGAAGATCAAG+GGG | 0.668190 | 8.1:+87090171 | MS.gene055366:CDS |
| TGCCATGAAGTATGACAACA+TGG | 0.671427 | 8.1:+87089712 | MS.gene055366:CDS |
| TGAATGTCAAAGGTGCCCGT+AGG | 0.674674 | 8.1:+87090056 | MS.gene055366:CDS |
| CAATTAGTATGCAATAAGGA+GGG | 0.675920 | 8.1:+87088246 | MS.gene055366:CDS |
| CGTATTGATGGAGATGCAGA+CGG | 0.679775 | 8.1:+87088000 | MS.gene055366:CDS |
| CAATGTTCCGAGTTATACAC+CGG | 0.682160 | 8.1:+87090858 | MS.gene055366:CDS |
| CATTTGACACTGCTACAGAG+TGG | 0.682675 | 8.1:-87090369 | None:intergenic |
| GAGCGCAAGTGATTATAAGG+AGG | 0.683366 | 8.1:+87089898 | MS.gene055366:CDS |
| TGTTGCGAATGATCCACTGA+TGG | 0.687875 | 8.1:+87090033 | MS.gene055366:CDS |
| GACGGTGTGGAATTTAACCA+TGG | 0.688761 | 8.1:+87088018 | MS.gene055366:CDS |
| TGTATATAGTGATACAGATG+AGG | 0.703043 | 8.1:+87087849 | MS.gene055366:CDS |
| TGTAGACGCTTTGAACGCAG+AGG | 0.705116 | 8.1:+87089665 | MS.gene055366:CDS |
| ACATAGACTATTGAACGCAG+CGG | 0.723695 | 8.1:-87089861 | None:intergenic |
| CACTGATAGTGATACAGATG+GGG | 0.724418 | 8.1:+87087900 | MS.gene055366:CDS |
| AATTATGCAAGAAATCCACA+AGG | 0.743577 | 8.1:-87089340 | None:intergenic |
| GGATATGGAATTCAACACAG+AGG | 0.763384 | 8.1:+87088122 | MS.gene055366:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAATATGCACTA+TGG | + | chr8.1:87090742-87090761 | MS.gene055366:CDS | 15.0% |
| !!! | ATTATTTTAATATGCACTAT+GGG | + | chr8.1:87090743-87090762 | MS.gene055366:CDS | 15.0% |
| !!! | TCATAAACTGTTTTAAATAT+AGG | - | chr8.1:87090953-87090972 | None:intergenic | 15.0% |
| !!! | TGAAATTGTATATGATATTT+TGG | + | chr8.1:87090298-87090317 | MS.gene055366:intron | 15.0% |
| !! | AAAGGACTTATATAATTTCA+CGG | + | chr8.1:87088578-87088597 | MS.gene055366:CDS | 20.0% |
| !! | AAAGTTTAAAGATGTCAAAA+AGG | + | chr8.1:87089493-87089512 | MS.gene055366:CDS | 20.0% |
| !!! | ATTTTCAAGGTTAATGTATT+TGG | + | chr8.1:87089581-87089600 | MS.gene055366:CDS | 20.0% |
| !!! | TTGTTTTAATTGTTGTAGAA+TGG | + | chr8.1:87090631-87090650 | MS.gene055366:intron | 20.0% |
| ! | AAATGATGATATAAGGGATA+TGG | + | chr8.1:87088107-87088126 | MS.gene055366:CDS | 25.0% |
| ! | AATTAAAGCACAAGCAAAAA+TGG | - | chr8.1:87088874-87088893 | None:intergenic | 25.0% |
| ! | ATATCCACTAAAAATGACAA+GGG | - | chr8.1:87088832-87088851 | None:intergenic | 25.0% |
| ! | ATGTGACAAATGATGATATA+AGG | + | chr8.1:87088100-87088119 | MS.gene055366:CDS | 25.0% |
| ! | CAGCAAATATACTATAACAA+AGG | - | chr8.1:87090568-87090587 | None:intergenic | 25.0% |
| ! | GATGGAAAAAATAAGAAGAA+TGG | + | chr8.1:87088276-87088295 | MS.gene055366:CDS | 25.0% |
| ! | GGTGGGTAAAAAAAATTTAT+CGG | + | chr8.1:87089198-87089217 | MS.gene055366:intron | 25.0% |
| ! | GTATCACTATATACATCAAA+AGG | - | chr8.1:87087844-87087863 | None:intergenic | 25.0% |
| ! | TAAACAATCAAAATACTCAC+CGG | - | chr8.1:87090880-87090899 | None:intergenic | 25.0% |
| ! | TATATCCACTAAAAATGACA+AGG | - | chr8.1:87088833-87088852 | None:intergenic | 25.0% |
| ! | TATTATTTGCAAAATACCAC+TGG | + | chr8.1:87088166-87088185 | MS.gene055366:CDS | 25.0% |
| ! | TGTGACAAATGATGATATAA+GGG | + | chr8.1:87088101-87088120 | MS.gene055366:CDS | 25.0% |
| !! | CAAAAAAGATGTAGCTTTTT+CGG | + | chr8.1:87089604-87089623 | MS.gene055366:CDS | 25.0% |
| !! | GACATCTTTAAACTTTTTAC+CGG | - | chr8.1:87089489-87089508 | None:intergenic | 25.0% |
| !! | TCAATGTTGATTGTGATATT+TGG | - | chr8.1:87090535-87090554 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTACCTTCTT+GGG | - | chr8.1:87089813-87089832 | None:intergenic | 25.0% |
| !!! | GGTTCTAAATTTGTTTTCAA+AGG | + | chr8.1:87088923-87088942 | MS.gene055366:intron | 25.0% |
| !!! | TTTTTTCATCATTACCTTCT+TGG | - | chr8.1:87089814-87089833 | None:intergenic | 25.0% |
| AAAACTGATCCACCATTATT+TGG | - | chr8.1:87090772-87090791 | None:intergenic | 30.0% | |
| AAACAATAGAGACATACAAG+TGG | + | chr8.1:87088901-87088920 | MS.gene055366:intron | 30.0% | |
| AACAAATACAAGCACTAGAA+AGG | + | chr8.1:87090492-87090511 | MS.gene055366:CDS | 30.0% | |
| AACAATAGAGACATACAAGT+GGG | + | chr8.1:87088902-87088921 | MS.gene055366:intron | 30.0% | |
| AAGGGTTAAAATACAAGATG+GGG | + | chr8.1:87088611-87088630 | MS.gene055366:CDS | 30.0% | |
| AATTATGCAAGAAATCCACA+AGG | - | chr8.1:87089343-87089362 | None:intergenic | 30.0% | |
| ACAAATACAAGCACTAGAAA+GGG | + | chr8.1:87090493-87090512 | MS.gene055366:CDS | 30.0% | |
| ACCTATAGAAAGAACAAGTA+TGG | + | chr8.1:87088801-87088820 | MS.gene055366:intron | 30.0% | |
| ATACTTGTTCTTTCTATAGG+TGG | - | chr8.1:87088802-87088821 | None:intergenic | 30.0% | |
| ATATAATTTCACGGATCATC+AGG | + | chr8.1:87088587-87088606 | MS.gene055366:CDS | 30.0% | |
| ATCATTCGCAACAAATTTGT+TGG | - | chr8.1:87090026-87090045 | None:intergenic | 30.0% | |
| ATGTGAAACGTGATTCTAAT+GGG | + | chr8.1:87088208-87088227 | MS.gene055366:CDS | 30.0% | |
| CAAGGGTTAAAATACAAGAT+GGG | + | chr8.1:87088610-87088629 | MS.gene055366:CDS | 30.0% | |
| CAATTAGTATGCAATAAGGA+GGG | + | chr8.1:87088246-87088265 | MS.gene055366:CDS | 30.0% | |
| GAGTTTACATTTACAGATGA+TGG | + | chr8.1:87088696-87088715 | MS.gene055366:intron | 30.0% | |
| GATTCATTATCAGACTCAAT+AGG | - | chr8.1:87090208-87090227 | None:intergenic | 30.0% | |
| GTAAGAACATGTCATATCTT+GGG | + | chr8.1:87088507-87088526 | MS.gene055366:CDS | 30.0% | |
| GTTCTAATTGTAGAAATCCT+GGG | + | chr8.1:87090110-87090129 | MS.gene055366:CDS | 30.0% | |
| TATCCACTAAAAATGACAAG+GGG | - | chr8.1:87088831-87088850 | None:intergenic | 30.0% | |
| TCAATTAGTATGCAATAAGG+AGG | + | chr8.1:87088245-87088264 | MS.gene055366:CDS | 30.0% | |
| TCCATACTTGTTCTTTCTAT+AGG | - | chr8.1:87088805-87088824 | None:intergenic | 30.0% | |
| TGTAAGAACATGTCATATCT+TGG | + | chr8.1:87088506-87088525 | MS.gene055366:CDS | 30.0% | |
| TGTATATAGTGATACAGATG+AGG | + | chr8.1:87087849-87087868 | MS.gene055366:CDS | 30.0% | |
| TGTTCTAATTGTAGAAATCC+TGG | + | chr8.1:87090109-87090128 | MS.gene055366:CDS | 30.0% | |
| TTCTAACACCACACAAAAAA+TGG | - | chr8.1:87089259-87089278 | None:intergenic | 30.0% | |
| ! | ATTTTTCATGTCCAAAGTCA+CGG | - | chr8.1:87090663-87090682 | None:intergenic | 30.0% |
| ! | TTTGAGTTATTTCCAAGGTA+AGG | + | chr8.1:87088647-87088666 | MS.gene055366:intron | 30.0% |
| ! | TTTTGGATGTTTGTCATACA+TGG | - | chr8.1:87088949-87088968 | None:intergenic | 30.0% |
| !! | ATTTTGACCTATCAAACAAC+AGG | + | chr8.1:87089177-87089196 | MS.gene055366:intron | 30.0% |
| !! | TAAATTTGTTGCGAGTGATA+AGG | + | chr8.1:87090000-87090019 | MS.gene055366:CDS | 30.0% |
| !! | TCACTCAATTTGCTGTAATT+AGG | - | chr8.1:87088447-87088466 | None:intergenic | 30.0% |
| !!! | ACGCCTAGAAAACATTTTTT+GGG | + | chr8.1:87088719-87088738 | MS.gene055366:intron | 30.0% |
| !!! | CATATCTTGGGTTTTTTGAT+GGG | + | chr8.1:87088519-87088538 | MS.gene055366:CDS | 30.0% |
| !!! | TCATATCTTGGGTTTTTTGA+TGG | + | chr8.1:87088518-87088537 | MS.gene055366:CDS | 30.0% |
| !!! | TGGAAACATTGTCATTTTCA+AGG | + | chr8.1:87089568-87089587 | MS.gene055366:CDS | 30.0% |
| AAATGGACATGACAAGGATA+AGG | + | chr8.1:87089973-87089992 | MS.gene055366:CDS | 35.0% | |
| AACAACGATGTTCGTATTGA+TGG | + | chr8.1:87087988-87088007 | MS.gene055366:CDS | 35.0% | |
| AAGATAAATAGCCGTCATGA+GGG | + | chr8.1:87089950-87089969 | MS.gene055366:CDS | 35.0% | |
| AATGGACATGACAAGGATAA+GGG | + | chr8.1:87089974-87089993 | MS.gene055366:CDS | 35.0% | |
| ACTTCATGGCACAAATAATG+TGG | - | chr8.1:87089703-87089722 | None:intergenic | 35.0% | |
| AGGACTTGGGTTTATCAAAA+AGG | + | chr8.1:87088560-87088579 | MS.gene055366:CDS | 35.0% | |
| AGTGTTAGAATGTGATGAGA+GGG | - | chr8.1:87090818-87090837 | None:intergenic | 35.0% | |
| ATATAGTGATACAGATGAGG+TGG | + | chr8.1:87087852-87087871 | MS.gene055366:CDS | 35.0% | |
| ATCAAATGGACAAAACGCAA+AGG | - | chr8.1:87088423-87088442 | None:intergenic | 35.0% | |
| ATCCATGTTGTCATACTTCA+TGG | - | chr8.1:87089717-87089736 | None:intergenic | 35.0% | |
| ATTTAGTCTGCAACTTGTCA+AGG | - | chr8.1:87089634-87089653 | None:intergenic | 35.0% | |
| CTGAAAAGTTTGAATCTGAG+TGG | + | chr8.1:87089138-87089157 | MS.gene055366:intron | 35.0% | |
| CTTCATGGCACAAATAATGT+GGG | - | chr8.1:87089702-87089721 | None:intergenic | 35.0% | |
| GAAGCTTCAAAGATATTCAC+CGG | + | chr8.1:87089467-87089486 | MS.gene055366:CDS | 35.0% | |
| GAGTTGTGTTTCCAAATACA+AGG | + | chr8.1:87089012-87089031 | MS.gene055366:intron | 35.0% | |
| GATGTGAAACGTGATTCTAA+TGG | + | chr8.1:87088207-87088226 | MS.gene055366:CDS | 35.0% | |
| GCAAGGGTTAAAATACAAGA+TGG | + | chr8.1:87088609-87088628 | MS.gene055366:CDS | 35.0% | |
| GCGTCAATTAGTATGCAATA+AGG | + | chr8.1:87088242-87088261 | MS.gene055366:CDS | 35.0% | |
| GTATGACAAACATCCAAAAG+CGG | + | chr8.1:87088950-87088969 | MS.gene055366:intron | 35.0% | |
| GTGGAATTTAACCATGGTAA+TGG | + | chr8.1:87088024-87088043 | MS.gene055366:CDS | 35.0% | |
| TAACACCATACCCAACATTA+TGG | - | chr8.1:87090723-87090742 | None:intergenic | 35.0% | |
| TAAGATAAATAGCCGTCATG+AGG | + | chr8.1:87089949-87089968 | MS.gene055366:CDS | 35.0% | |
| TATCATTACTCATAGACAGC+TGG | - | chr8.1:87090336-87090355 | None:intergenic | 35.0% | |
| TGCAGAACAATTAGTTCGAA+TGG | - | chr8.1:87088319-87088338 | None:intergenic | 35.0% | |
| TGCTGTAATTAGGCATCAAA+TGG | - | chr8.1:87088437-87088456 | None:intergenic | 35.0% | |
| TTAGAACAACATCTTGTCCT+CGG | - | chr8.1:87090097-87090116 | None:intergenic | 35.0% | |
| ! | AAAGTCTGATTTGCAAGAGA+TGG | + | chr8.1:87089747-87089766 | MS.gene055366:CDS | 35.0% |
| ! | ACACTGATAGTGATACAGAT+GGG | + | chr8.1:87087899-87087918 | MS.gene055366:CDS | 35.0% |
| ! | AGGTTTGACTATGAGTGTTT+TGG | + | chr8.1:87088756-87088775 | MS.gene055366:intron | 35.0% |
| ! | CAAGTTGGAACCATAATGTT+GGG | + | chr8.1:87090710-87090729 | MS.gene055366:CDS | 35.0% |
| ! | CACTCAGATTCAAACTTTTC+AGG | - | chr8.1:87089140-87089159 | None:intergenic | 35.0% |
| ! | CTGCCCAAAAAATGTTTTCT+AGG | - | chr8.1:87088725-87088744 | None:intergenic | 35.0% |
| ! | GCTACTTTGAGTTATTTCCA+AGG | + | chr8.1:87088642-87088661 | MS.gene055366:CDS | 35.0% |
| ! | GTTGATAAACAAGTTGCTAG+TGG | + | chr8.1:87088468-87088487 | MS.gene055366:CDS | 35.0% |
| ! | TAAGAGCGCAAGTGATTATA+AGG | + | chr8.1:87089895-87089914 | MS.gene055366:CDS | 35.0% |
| ! | TTATCGGTTGAAGAGAATGT+GGG | + | chr8.1:87089214-87089233 | MS.gene055366:intron | 35.0% |
| ! | TTTAGTGGATATAACCACCA+TGG | + | chr8.1:87088840-87088859 | MS.gene055366:intron | 35.0% |
| ! | TTTATCGGTTGAAGAGAATG+TGG | + | chr8.1:87089213-87089232 | MS.gene055366:intron | 35.0% |
| ! | TTTTTCATGTCCAAAGTCAC+GGG | - | chr8.1:87090662-87090681 | None:intergenic | 35.0% |
| !! | AATAAGGAGGGTGTTAATGA+TGG | + | chr8.1:87088258-87088277 | MS.gene055366:CDS | 35.0% |
| !! | ATTATAAGGAGGCTCTAGAA+GGG | + | chr8.1:87089909-87089928 | MS.gene055366:CDS | 35.0% |
| !! | CAAAAATGGTTGTTTCTCCA+TGG | - | chr8.1:87088860-87088879 | None:intergenic | 35.0% |
| !! | TGCTGAAAATTGTGTTGCTT+TGG | + | chr8.1:87090583-87090602 | MS.gene055366:intron | 35.0% |
| !!! | AAACCCCTTGTCATTTTTAG+TGG | + | chr8.1:87088825-87088844 | MS.gene055366:intron | 35.0% |
| !!! | GACGCCTAGAAAACATTTTT+TGG | + | chr8.1:87088718-87088737 | MS.gene055366:intron | 35.0% |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | + | chr8.1:87088528-87088547 | MS.gene055366:CDS | 35.0% |
| !!! | GTGTTGACTTTTTACTCCTA+CGG | - | chr8.1:87090075-87090094 | None:intergenic | 35.0% |
| !!! | TCAAACTTTTCAGGTGTACA+AGG | - | chr8.1:87089131-87089150 | None:intergenic | 35.0% |
| !!! | TGTTGACTTTTTACTCCTAC+GGG | - | chr8.1:87090074-87090093 | None:intergenic | 35.0% |
| AAAAGCGGTGATTACTGATG+GGG | + | chr8.1:87088965-87088984 | MS.gene055366:intron | 40.0% | |
| AAAATGACCATGTTTCGTCG+AGG | + | chr8.1:87089830-87089849 | MS.gene055366:CDS | 40.0% | |
| AAACATCGCAGTGACTATTG+TGG | + | chr8.1:87091002-87091021 | MS.gene055366:CDS | 40.0% | |
| AAATGACCATGTTTCGTCGA+GGG | + | chr8.1:87089831-87089850 | MS.gene055366:CDS | 40.0% | |
| AACATTTCGATGCAAATGCC+AGG | - | chr8.1:87089051-87089070 | None:intergenic | 40.0% | |
| AACGCAAAGGAGCTAATTCA+TGG | - | chr8.1:87088410-87088429 | None:intergenic | 40.0% | |
| AATGGTGTTTGCAATGAGCA+AGG | + | chr8.1:87088042-87088061 | MS.gene055366:CDS | 40.0% | |
| ACATAGACTATTGAACGCAG+CGG | - | chr8.1:87089864-87089883 | None:intergenic | 40.0% | |
| ACGACTTTGTTCGTACGATT+TGG | + | chr8.1:87088355-87088374 | MS.gene055366:CDS | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | + | chr8.1:87089275-87089294 | MS.gene055366:intron | 40.0% | |
| AGATGTCAAAAAGGCGATAG+AGG | + | chr8.1:87089502-87089521 | MS.gene055366:CDS | 40.0% | |
| AGCTAATTCATGGTTGTGAG+AGG | - | chr8.1:87088400-87088419 | None:intergenic | 40.0% | |
| AGTTTGAATCTGAGTGGAAG+AGG | + | chr8.1:87089144-87089163 | MS.gene055366:intron | 40.0% | |
| ATACTCACCGGTGTATAACT+CGG | - | chr8.1:87090868-87090887 | None:intergenic | 40.0% | |
| ATGGTGTTTGCAATGAGCAA+GGG | + | chr8.1:87088043-87088062 | MS.gene055366:CDS | 40.0% | |
| CAAAAGCGGTGATTACTGAT+GGG | + | chr8.1:87088964-87088983 | MS.gene055366:intron | 40.0% | |
| CAAAGGTGATGCCTTGTATT+TGG | - | chr8.1:87089026-87089045 | None:intergenic | 40.0% | |
| CAAGGGAAAGAGAACTTTGA+TGG | + | chr8.1:87088060-87088079 | MS.gene055366:CDS | 40.0% | |
| CAATGTTCCGAGTTATACAC+CGG | + | chr8.1:87090858-87090877 | MS.gene055366:CDS | 40.0% | |
| CACTGGTATTACACGTAAGA+GGG | + | chr8.1:87090414-87090433 | MS.gene055366:CDS | 40.0% | |
| CAGTGTTAGAATGTGATGAG+AGG | - | chr8.1:87090819-87090838 | None:intergenic | 40.0% | |
| CATTGAACGAGATGAAGATG+TGG | + | chr8.1:87089544-87089563 | MS.gene055366:CDS | 40.0% | |
| CATTGCAAACACCATTACCA+TGG | - | chr8.1:87088038-87088057 | None:intergenic | 40.0% | |
| CCTTTCTTACTTCAAACCAG+TGG | - | chr8.1:87088185-87088204 | None:intergenic | 40.0% | |
| CTCTTGCAAATCAGACTTTC+AGG | - | chr8.1:87089746-87089765 | None:intergenic | 40.0% | |
| GCACAAATAATGTGGGAACA+TGG | - | chr8.1:87089695-87089714 | None:intergenic | 40.0% | |
| GCTAATTCATGGTTGTGAGA+GGG | - | chr8.1:87088399-87088418 | None:intergenic | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr8.1:87088122-87088141 | MS.gene055366:CDS | 40.0% | |
| GTTTGAATCTGAGTGGAAGA+GGG | + | chr8.1:87089145-87089164 | MS.gene055366:intron | 40.0% | |
| TATCAGTATCAGCCTTACCT+TGG | - | chr8.1:87088662-87088681 | None:intergenic | 40.0% | |
| TATGAGTGCGTTGAAGATTG+TGG | + | chr8.1:87090968-87090987 | MS.gene055366:CDS | 40.0% | |
| TATGGTTCCAACTTGCACAA+TGG | - | chr8.1:87090705-87090724 | None:intergenic | 40.0% | |
| TGACCTATCAAACAACAGGT+GGG | + | chr8.1:87089181-87089200 | MS.gene055366:intron | 40.0% | |
| TGATAAACCCAAGTCCTTCA+TGG | - | chr8.1:87088557-87088576 | None:intergenic | 40.0% | |
| TGCCATGAAGTATGACAACA+TGG | + | chr8.1:87089712-87089731 | MS.gene055366:CDS | 40.0% | |
| TGGAACCATAATGTTGGGTA+TGG | + | chr8.1:87090715-87090734 | MS.gene055366:CDS | 40.0% | |
| TTCATCATTACCTTCTTGGG+AGG | - | chr8.1:87089810-87089829 | None:intergenic | 40.0% | |
| TTCGAATGGTTAGCGTAGAT+CGG | - | chr8.1:87088305-87088324 | None:intergenic | 40.0% | |
| TTGACCTATCAAACAACAGG+TGG | + | chr8.1:87089180-87089199 | MS.gene055366:intron | 40.0% | |
| TTTGGGCAGATTCTACTAGT+AGG | + | chr8.1:87088736-87088755 | MS.gene055366:intron | 40.0% | |
| ! | CACTGATAGTGATACAGATG+GGG | + | chr8.1:87087900-87087919 | MS.gene055366:CDS | 40.0% |
| ! | GACACTGATAGTGATACAGA+TGG | + | chr8.1:87087898-87087917 | MS.gene055366:CDS | 40.0% |
| ! | GCAAGTTGGAACCATAATGT+TGG | + | chr8.1:87090709-87090728 | MS.gene055366:CDS | 40.0% |
| ! | TTACCCACCTGTTGTTTGAT+AGG | - | chr8.1:87089187-87089206 | None:intergenic | 40.0% |
| !! | AAATGGTTGTTTCTCCATGG+TGG | - | chr8.1:87088857-87088876 | None:intergenic | 40.0% |
| !! | CCACTGGTTTGAAGTAAGAA+AGG | + | chr8.1:87088182-87088201 | MS.gene055366:CDS | 40.0% |
| !! | GATTATAAGGAGGCTCTAGA+AGG | + | chr8.1:87089908-87089927 | MS.gene055366:CDS | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | + | chr8.1:87088531-87088550 | MS.gene055366:CDS | 40.0% |
| !!! | ATGCGAGACCATTTTTTGTG+TGG | + | chr8.1:87089248-87089267 | MS.gene055366:intron | 40.0% |
| !!! | CCACAAGGCTATTTTTGTGT+CGG | - | chr8.1:87089328-87089347 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTGATGGGTCAAA+AGG | + | chr8.1:87088527-87088546 | MS.gene055366:CDS | 40.0% |
| AAGACAGCCATTGTGCAAGT+TGG | + | chr8.1:87090695-87090714 | MS.gene055366:CDS | 45.0% | |
| AATAGCCGTCATGAGGGAAA+TGG | + | chr8.1:87089956-87089975 | MS.gene055366:CDS | 45.0% | |
| AATGACCATGTTTCGTCGAG+GGG | + | chr8.1:87089832-87089851 | MS.gene055366:CDS | 45.0% | |
| ACACCAATTCCAGCAAGTTC+TGG | - | chr8.1:87090154-87090173 | None:intergenic | 45.0% | |
| ATTTCACGGATCATCAGGCA+AGG | + | chr8.1:87088592-87088611 | MS.gene055366:CDS | 45.0% | |
| CACTCTGTAGCAGTGTCAAA+TGG | + | chr8.1:87090370-87090389 | MS.gene055366:CDS | 45.0% | |
| CATGTCCATTTCCCTCATGA+CGG | - | chr8.1:87089964-87089983 | None:intergenic | 45.0% | |
| CATTTGACACTGCTACAGAG+TGG | - | chr8.1:87090372-87090391 | None:intergenic | 45.0% | |
| CCAAAAGCGGTGATTACTGA+TGG | + | chr8.1:87088963-87088982 | MS.gene055366:intron | 45.0% | |
| CCTTTGACATTCACCATCAG+TGG | - | chr8.1:87090049-87090068 | None:intergenic | 45.0% | |
| GAAATCCTGGGCACACAATA+CGG | + | chr8.1:87090122-87090141 | MS.gene055366:CDS | 45.0% | |
| GAACGAGATGAAGATGTGGA+TGG | + | chr8.1:87089548-87089567 | MS.gene055366:CDS | 45.0% | |
| GACGGTGTGGAATTTAACCA+TGG | + | chr8.1:87088018-87088037 | MS.gene055366:CDS | 45.0% | |
| GAGCGCAAGTGATTATAAGG+AGG | + | chr8.1:87089898-87089917 | MS.gene055366:CDS | 45.0% | |
| GGAGTAAAAAGTCAACACCG+AGG | + | chr8.1:87090077-87090096 | MS.gene055366:CDS | 45.0% | |
| GTCAATGCAGTTGTCAGCAT+AGG | - | chr8.1:87089434-87089453 | None:intergenic | 45.0% | |
| GTGTCGTGTCTGAAGATCAA+GGG | + | chr8.1:87090170-87090189 | MS.gene055366:CDS | 45.0% | |
| TCTAACACTGCTCTGCATAC+TGG | + | chr8.1:87090829-87090848 | MS.gene055366:CDS | 45.0% | |
| TCTGTAGCAGTGTCAAATGG+TGG | + | chr8.1:87090373-87090392 | MS.gene055366:CDS | 45.0% | |
| TGAGGGAAATGGACATGACA+AGG | + | chr8.1:87089967-87089986 | MS.gene055366:CDS | 45.0% | |
| TGTCGTGTCTGAAGATCAAG+GGG | + | chr8.1:87090171-87090190 | MS.gene055366:CDS | 45.0% | |
| TGTGATGAGAGGGTAGTTGT+CGG | - | chr8.1:87090808-87090827 | None:intergenic | 45.0% | |
| TGTTGCGAATGATCCACTGA+TGG | + | chr8.1:87090033-87090052 | MS.gene055366:CDS | 45.0% | |
| TTTCACGGATCATCAGGCAA+GGG | + | chr8.1:87088593-87088612 | MS.gene055366:CDS | 45.0% | |
| ! | CACTATGGGCTGCCAAATAA+TGG | + | chr8.1:87090757-87090776 | MS.gene055366:CDS | 45.0% |
| ! | CCACTGATGGTGAATGTCAA+AGG | + | chr8.1:87090046-87090065 | MS.gene055366:CDS | 45.0% |
| ! | CCATCAGTAATCACCGCTTT+TGG | - | chr8.1:87088966-87088985 | None:intergenic | 45.0% |
| ! | CCGACACAAAAATAGCCTTG+TGG | + | chr8.1:87089325-87089344 | MS.gene055366:CDS | 45.0% |
| ! | CGAGATGTTGAGAAAAGCAC+TGG | + | chr8.1:87090397-87090416 | MS.gene055366:CDS | 45.0% |
| ! | CGTATTGATGGAGATGCAGA+CGG | + | chr8.1:87088000-87088019 | MS.gene055366:CDS | 45.0% |
| ! | GCACTGGTATTACACGTAAG+AGG | + | chr8.1:87090413-87090432 | MS.gene055366:CDS | 45.0% |
| ! | TATGGGCTGCCAAATAATGG+TGG | + | chr8.1:87090760-87090779 | MS.gene055366:CDS | 45.0% |
| ! | TGATAGTGATACAGATGGGG+TGG | + | chr8.1:87087903-87087922 | MS.gene055366:CDS | 45.0% |
| !! | TGTCCAGAACTTGCTGGAAT+TGG | + | chr8.1:87090148-87090167 | MS.gene055366:CDS | 45.0% |
| AATGGTGTGACCCGTGACTT+TGG | + | chr8.1:87090649-87090668 | MS.gene055366:CDS | 50.0% | |
| ATGAGAGGGTAGTTGTCGGA+GGG | - | chr8.1:87090804-87090823 | None:intergenic | 50.0% | |
| GCTAGTGGTCTACATTCGCA+AGG | + | chr8.1:87088483-87088502 | MS.gene055366:CDS | 50.0% | |
| GTAGTTGTCGGAGGGAATTG+TGG | - | chr8.1:87090796-87090815 | None:intergenic | 50.0% | |
| GTCTGAAGATCAAGGGGAGA+AGG | + | chr8.1:87090177-87090196 | MS.gene055366:CDS | 50.0% | |
| TCGTCATTTGCCTCCCAAGA+AGG | + | chr8.1:87089797-87089816 | MS.gene055366:CDS | 50.0% | |
| ! | GGTGTCGTGTCTGAAGATCA+AGG | + | chr8.1:87090169-87090188 | MS.gene055366:CDS | 50.0% |
| ! | TGTAGACGCTTTGAACGCAG+AGG | + | chr8.1:87089665-87089684 | MS.gene055366:CDS | 50.0% |
| !! | TGAATGTCAAAGGTGCCCGT+AGG | + | chr8.1:87090056-87090075 | MS.gene055366:CDS | 50.0% |
| AAGGGTGGCCATGAAGGACT+TGG | + | chr8.1:87088546-87088565 | MS.gene055366:CDS | 55.0% | |
| AAGTGCCCCTCGACGAAACA+TGG | - | chr8.1:87089840-87089859 | None:intergenic | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | + | chr8.1:87088547-87088566 | MS.gene055366:CDS | 55.0% | |
| GATGAGAGGGTAGTTGTCGG+AGG | - | chr8.1:87090805-87090824 | None:intergenic | 55.0% | |
| GATGCAAATGCCAGGCGCAA+AGG | - | chr8.1:87089043-87089062 | None:intergenic | 55.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | + | chr8.1:87088540-87088559 | MS.gene055366:CDS | 55.0% | |
| TGATGGAGATGCAGACGGTG+TGG | + | chr8.1:87088005-87088024 | MS.gene055366:CDS | 55.0% | |
| CACGTCCGTATTGTGTGCCC+AGG | - | chr8.1:87090130-87090149 | None:intergenic | 60.0% | |
| CGGACGTGTCCAGAACTTGC+TGG | + | chr8.1:87090142-87090161 | MS.gene055366:CDS | 60.0% | |
| ! | CAAGGCATCACCTTTGCGCC+TGG | + | chr8.1:87089030-87089049 | MS.gene055366:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 87087814 | 87091037 | 87087814 | ID=MS.gene055366 |
| chr8.1 | mRNA | 87087814 | 87091037 | 87087814 | ID=MS.gene055366.t1;Parent=MS.gene055366 |
| chr8.1 | exon | 87087814 | 87088663 | 87087814 | ID=MS.gene055366.t1.exon1;Parent=MS.gene055366.t1 |
| chr8.1 | CDS | 87087814 | 87088663 | 87087814 | ID=cds.MS.gene055366.t1;Parent=MS.gene055366.t1 |
| chr8.1 | exon | 87089300 | 87090240 | 87089300 | ID=MS.gene055366.t1.exon2;Parent=MS.gene055366.t1 |
| chr8.1 | CDS | 87089300 | 87090240 | 87089300 | ID=cds.MS.gene055366.t1;Parent=MS.gene055366.t1 |
| chr8.1 | exon | 87090337 | 87090558 | 87090337 | ID=MS.gene055366.t1.exon3;Parent=MS.gene055366.t1 |
| chr8.1 | CDS | 87090337 | 87090558 | 87090337 | ID=cds.MS.gene055366.t1;Parent=MS.gene055366.t1 |
| chr8.1 | exon | 87090649 | 87090879 | 87090649 | ID=MS.gene055366.t1.exon4;Parent=MS.gene055366.t1 |
| chr8.1 | CDS | 87090649 | 87090879 | 87090649 | ID=cds.MS.gene055366.t1;Parent=MS.gene055366.t1 |
| chr8.1 | exon | 87090966 | 87091037 | 87090966 | ID=MS.gene055366.t1.exon5;Parent=MS.gene055366.t1 |
| chr8.1 | CDS | 87090966 | 87091037 | 87090966 | ID=cds.MS.gene055366.t1;Parent=MS.gene055366.t1 |
| Gene Sequence |
| Protein sequence |
