AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05570.t1 MTR_3g463400 93.363 452 25 2 1 448 1 451 0.0 851
MS.gene05570.t1 MTR_5g070020 47.700 413 142 15 5 412 11 354 7.45e-108 323
MS.gene05570.t1 MTR_3g077650 45.455 242 98 7 28 262 90 304 2.78e-59 201
MS.gene05570.t1 MTR_4g105660 66.412 131 39 1 132 262 178 303 2.22e-57 195
MS.gene05570.t1 MTR_5g049190 49.000 200 80 4 132 322 17 203 4.96e-56 186
MS.gene05570.t1 MTR_4g088015 58.108 148 57 2 132 279 219 361 1.75e-54 188
MS.gene05570.t1 MTR_7g451170 62.222 135 44 2 133 266 190 318 9.19e-53 182
MS.gene05570.t1 MTR_7g037260 57.664 137 53 2 130 266 141 272 3.74e-52 179
MS.gene05570.t1 MTR_7g037130 54.015 137 58 2 130 266 141 272 1.54e-46 164
MS.gene05570.t1 MTR_7g035350 51.825 137 62 1 130 266 221 353 1.12e-45 164
MS.gene05570.t1 MTR_1g057980 54.135 133 57 1 134 266 80 208 8.62e-45 158
MS.gene05570.t1 MTR_7g450950 52.273 132 60 1 133 264 156 284 2.08e-41 150
MS.gene05570.t1 MTR_7g061330 43.137 204 112 2 123 322 66 269 4.85e-41 153
MS.gene05570.t1 MTR_7g061330 43.137 204 112 2 123 322 102 305 7.22e-41 153
MS.gene05570.t1 MTR_7g461410 43.137 204 112 2 123 322 102 305 7.22e-41 153
MS.gene05570.t1 MTR_3g110028 56.250 112 49 0 123 234 74 185 2.64e-38 148
MS.gene05570.t1 MTR_1g026870 54.464 112 51 0 123 234 74 185 2.42e-37 145
MS.gene05570.t1 MTR_5g010650 46.259 147 66 2 95 228 58 204 1.00e-36 140
MS.gene05570.t1 MTR_4g019370 52.941 102 48 0 133 234 37 138 6.55e-34 130
MS.gene05570.t1 MTR_4g094982 50.000 104 52 0 133 236 4 107 1.89e-31 122
MS.gene05570.t1 MTR_3g101290 50.000 102 51 0 133 234 36 137 6.66e-31 119
MS.gene05570.t1 MTR_6g009430 43.056 144 76 4 123 263 3 143 1.70e-30 120
MS.gene05570.t1 MTR_5g016510 48.077 104 54 0 133 236 4 107 1.91e-30 120
MS.gene05570.t1 MTR_4g082040 50.000 112 53 1 134 242 105 216 4.44e-30 121
MS.gene05570.t1 MTR_2g089450 36.449 214 117 7 132 336 12 215 7.89e-30 117
MS.gene05570.t1 MTR_5g041570 46.400 125 64 1 121 242 121 245 1.32e-29 120
MS.gene05570.t1 MTR_8g017440 49.515 103 49 2 134 234 14 115 1.33e-29 118
MS.gene05570.t1 MTR_6g027360 49.515 103 52 0 132 234 76 178 1.42e-29 117
MS.gene05570.t1 MTR_1g085040 43.478 138 72 4 132 267 12 145 1.56e-29 119
MS.gene05570.t1 MTR_0008s0390 41.606 137 75 3 120 252 1 136 1.87e-29 116
MS.gene05570.t1 MTR_8g017540 50.485 103 48 2 134 234 60 161 2.23e-29 119
MS.gene05570.t1 MTR_6g074860 49.524 105 53 0 134 238 4 108 2.33e-29 115
MS.gene05570.t1 MTR_6g027340 48.515 101 52 0 134 234 16 116 2.53e-29 114
MS.gene05570.t1 MTR_8g017500 49.515 103 49 2 134 234 14 115 8.32e-29 116
MS.gene05570.t1 MTR_3g089045 51.304 115 53 1 131 242 13 127 8.54e-29 115
MS.gene05570.t1 MTR_7g110830 37.363 182 102 5 132 306 12 188 8.97e-29 116
MS.gene05570.t1 MTR_2g011660 43.966 116 64 1 120 234 1 116 9.64e-29 116
MS.gene05570.t1 MTR_1g085640 48.077 104 53 1 132 234 12 115 1.19e-28 116
MS.gene05570.t1 MTR_5g010020 48.454 97 49 1 134 229 14 110 1.24e-28 115
MS.gene05570.t1 MTR_7g086960 43.151 146 74 2 134 275 89 229 1.29e-28 115
MS.gene05570.t1 MTR_5g082910 47.959 98 51 0 133 230 18 115 1.44e-28 114
MS.gene05570.t1 MTR_3g065440 33.175 211 134 5 120 328 1 206 1.60e-28 114
MS.gene05570.t1 MTR_5g029840 42.241 116 65 2 120 234 1 115 2.08e-28 115
MS.gene05570.t1 MTR_4g091490 44.444 117 62 2 120 234 1 116 2.11e-28 115
MS.gene05570.t1 MTR_2g089420 47.368 114 56 3 132 242 11 123 3.23e-28 116
MS.gene05570.t1 MTR_3g077110 46.789 109 55 2 132 238 12 119 3.56e-28 114
MS.gene05570.t1 MTR_2g099740 47.573 103 51 2 134 234 14 115 4.07e-28 115
MS.gene05570.t1 MTR_7g111290 51.515 99 45 2 132 228 12 109 6.28e-28 114
MS.gene05570.t1 MTR_1g112760 46.789 109 55 2 132 238 13 120 6.60e-28 110
MS.gene05570.t1 MTR_5g078140 46.667 120 60 3 120 237 1 118 1.03e-27 112
MS.gene05570.t1 MTR_4g073420 38.095 168 85 6 134 293 14 170 1.03e-27 112
MS.gene05570.t1 MTR_6g027370 48.039 102 53 0 133 234 98 199 1.04e-27 113
MS.gene05570.t1 MTR_8g017390 49.038 104 49 3 134 234 14 116 1.04e-27 115
MS.gene05570.t1 MTR_2g097910 45.378 119 61 3 132 247 20 137 1.13e-27 112
MS.gene05570.t1 MTR_2g064160 45.631 103 53 2 134 234 13 114 1.19e-27 112
MS.gene05570.t1 MTR_4g065017 44.915 118 63 2 132 247 17 134 1.37e-27 112
MS.gene05570.t1 MTR_3g028740 42.735 117 66 1 119 234 9 125 1.39e-27 112
MS.gene05570.t1 MTR_0251s0050 42.735 117 64 2 120 234 1 116 1.43e-27 111
MS.gene05570.t1 MTR_3g074520 46.154 117 59 3 120 234 1 115 2.00e-27 112
MS.gene05570.t1 MTR_8g017340 49.038 104 49 3 134 234 14 116 2.48e-27 114
MS.gene05570.t1 MTR_4g105130 45.192 104 56 1 132 234 12 115 2.56e-27 112
MS.gene05570.t1 MTR_4g478180 44.915 118 61 3 119 234 1 116 2.65e-27 112
MS.gene05570.t1 MTR_4g100720 48.454 97 49 1 134 229 15 111 2.70e-27 107
MS.gene05570.t1 MTR_3g461490 42.647 136 74 3 134 268 14 146 2.74e-27 111
MS.gene05570.t1 MTR_0008s0470 41.026 117 66 2 120 234 1 116 4.32e-27 110
MS.gene05570.t1 MTR_8g031360 44.444 117 63 1 120 234 1 117 4.35e-27 110
MS.gene05570.t1 MTR_4g102380 44.444 117 61 3 120 234 1 115 4.38e-27 109
MS.gene05570.t1 MTR_8g095390 42.453 106 60 1 134 238 14 119 4.62e-27 110
MS.gene05570.t1 MTR_5g079670 46.602 103 52 2 134 234 13 114 5.01e-27 108
MS.gene05570.t1 MTR_7g011170 45.000 120 62 3 120 237 1 118 5.25e-27 110
MS.gene05570.t1 MTR_3g097450 38.037 163 78 5 134 294 14 155 6.35e-27 110
MS.gene05570.t1 MTR_3g052450 48.571 105 52 2 132 234 40 144 7.46e-27 113
MS.gene05570.t1 MTR_8g017350 48.077 104 50 3 134 234 14 116 1.15e-26 113
MS.gene05570.t1 MTR_3g052430 48.571 105 52 2 132 234 41 145 1.72e-26 112
MS.gene05570.t1 MTR_8g098860 42.453 106 60 1 134 238 14 119 1.92e-26 109
MS.gene05570.t1 MTR_4g063100 46.296 108 55 2 134 239 9 115 1.93e-26 107
MS.gene05570.t1 MTR_4g485530 40.678 118 69 1 122 238 2 119 2.30e-26 105
MS.gene05570.t1 MTR_6g015455 44.231 104 58 0 133 236 4 107 3.60e-26 112
MS.gene05570.t1 MTR_8g027345 40.602 133 77 2 120 251 1 132 4.33e-26 107
MS.gene05570.t1 MTR_2g089620 43.966 116 63 2 120 234 1 115 5.11e-26 108
MS.gene05570.t1 MTR_4g082230 42.241 116 65 2 120 234 1 115 9.13e-26 108
MS.gene05570.t1 MTR_4g082290 42.241 116 65 2 120 234 1 115 9.87e-26 108
MS.gene05570.t1 MTR_1g073170 47.321 112 51 3 134 243 22 127 1.14e-25 105
MS.gene05570.t1 MTR_5g007370 44.762 105 55 2 132 234 12 115 1.18e-25 106
MS.gene05570.t1 MTR_3g011610 48.571 105 50 3 132 233 37 140 1.42e-25 109
MS.gene05570.t1 MTR_4g029540 50.000 102 49 2 134 233 12 113 2.78e-25 105
MS.gene05570.t1 MTR_0197s0010 36.585 164 93 5 137 298 6 160 3.20e-25 103
MS.gene05570.t1 MTR_4g125520 44.144 111 60 2 120 229 1 110 3.36e-25 105
MS.gene05570.t1 MTR_8g042410 46.226 106 54 2 132 235 37 141 3.70e-25 108
MS.gene05570.t1 MTR_1g045610 43.200 125 63 3 134 256 23 141 5.18e-25 103
MS.gene05570.t1 MTR_1g043050 34.848 198 100 7 132 317 12 192 6.29e-25 103
MS.gene05570.t1 MTR_2g096380 33.962 159 94 3 134 290 8 157 6.67e-25 102
MS.gene05570.t1 MTR_5g042030 42.056 107 61 1 129 234 4 110 6.68e-25 104
MS.gene05570.t1 MTR_8g020490 48.148 108 50 2 122 228 3 105 6.87e-25 103
MS.gene05570.t1 MTR_7g076740 43.590 117 63 2 120 234 1 116 7.50e-25 104
MS.gene05570.t1 MTR_7g096930 40.288 139 70 4 120 247 1 137 7.97e-25 103
MS.gene05570.t1 MTR_7g115650 32.353 204 112 5 134 328 14 200 8.80e-25 101
MS.gene05570.t1 MTR_7g117730 44.144 111 60 2 120 229 1 110 1.22e-24 102
MS.gene05570.t1 MTR_1g021230 46.667 105 53 2 132 234 57 160 1.41e-24 105
MS.gene05570.t1 MTR_1g100653 45.133 113 58 3 134 243 14 125 1.43e-24 103
MS.gene05570.t1 MTR_6g012690 42.017 119 67 2 120 237 1 118 1.54e-24 104
MS.gene05570.t1 MTR_2g034790 43.966 116 63 2 120 234 1 115 2.23e-24 103
MS.gene05570.t1 MTR_1g062940 31.651 218 118 7 132 339 6 202 3.03e-24 100
MS.gene05570.t1 MTR_8g006470 49.020 102 50 2 134 233 12 113 3.71e-24 102
MS.gene05570.t1 MTR_5g078910 43.810 105 58 1 131 234 6 110 3.93e-24 102
MS.gene05570.t1 MTR_5g079120 39.007 141 77 3 115 246 41 181 4.76e-24 102
MS.gene05570.t1 MTR_0140s0030 36.842 133 83 1 123 254 4 136 5.47e-24 102
MS.gene05570.t1 MTR_0489s0020 36.842 133 83 1 123 254 4 136 5.47e-24 102
MS.gene05570.t1 MTR_4g121460 42.735 117 63 3 120 234 1 115 1.04e-23 102
MS.gene05570.t1 MTR_5g079290 42.453 106 60 1 134 238 19 124 1.25e-23 100
MS.gene05570.t1 MTR_7g010210 40.323 124 68 2 123 245 3 121 2.06e-23 100
MS.gene05570.t1 MTR_0001s0360 45.361 97 52 1 134 229 9 105 2.43e-23 99.0
MS.gene05570.t1 MTR_3g083540 43.269 104 58 1 127 229 36 139 2.60e-23 100
MS.gene05570.t1 MTR_1g083630 44.860 107 58 1 129 234 9 115 2.84e-23 103
MS.gene05570.t1 MTR_1g110460 41.346 104 60 1 132 234 26 129 2.96e-23 100
MS.gene05570.t1 MTR_5g079220 40.000 115 68 1 125 238 14 128 3.38e-23 99.0
MS.gene05570.t1 MTR_7g010210 40.323 124 68 2 123 245 3 121 3.53e-23 99.0
MS.gene05570.t1 MTR_7g035075 40.179 112 66 1 134 244 16 127 5.27e-23 97.1
MS.gene05570.t1 MTR_5g088640 45.631 103 52 3 134 233 14 115 6.59e-23 98.2
MS.gene05570.t1 MTR_6g055910 39.024 123 74 1 124 245 6 128 6.71e-23 98.6
MS.gene05570.t1 MTR_5g088080 45.631 103 52 3 134 233 14 115 7.69e-23 97.8
MS.gene05570.t1 MTR_5g088150 45.631 103 52 3 134 233 14 115 7.69e-23 97.8
MS.gene05570.t1 MTR_5g488210 45.631 103 52 3 134 233 14 115 7.69e-23 97.8
MS.gene05570.t1 MTR_1g076150 37.405 131 79 2 123 251 3 132 8.67e-23 97.4
MS.gene05570.t1 MTR_1g100667 41.905 105 60 1 134 237 15 119 1.07e-22 97.8
MS.gene05570.t1 MTR_5g488170 45.631 103 52 3 134 233 14 115 1.26e-22 96.7
MS.gene05570.t1 MTR_7g017260 34.965 143 89 2 129 267 22 164 1.36e-22 97.4
MS.gene05570.t1 MTR_4g097570 38.760 129 75 3 120 245 1 128 1.46e-22 97.8
MS.gene05570.t1 MTR_5g062790 44.954 109 56 3 128 233 5 112 1.56e-22 97.8
MS.gene05570.t1 MTR_3g039990 30.876 217 132 5 123 338 4 203 2.48e-22 97.4
MS.gene05570.t1 MTR_0063s0090 38.136 118 69 3 134 249 14 129 4.92e-22 94.7
MS.gene05570.t1 MTR_2g095520 41.964 112 62 3 120 229 1 111 5.03e-22 96.7
MS.gene05570.t1 MTR_0008s0280 41.837 98 54 2 134 229 14 110 5.18e-22 94.7
MS.gene05570.t1 MTR_0247s0040 44.000 100 55 1 134 232 9 108 6.01e-22 93.2
MS.gene05570.t1 MTR_5g014990 34.021 194 109 7 120 299 1 189 6.51e-22 96.3
MS.gene05570.t1 MTR_6g006030 46.875 96 48 2 134 227 16 110 8.25e-22 93.6
MS.gene05570.t1 MTR_5g078950 41.000 100 58 1 134 232 9 108 9.21e-22 94.7
MS.gene05570.t1 MTR_1g043080 42.857 105 57 2 132 234 12 115 1.12e-21 94.4
MS.gene05570.t1 MTR_1g017140 39.231 130 74 4 120 245 1 129 1.25e-21 95.9
MS.gene05570.t1 MTR_4g097570 38.281 128 76 3 120 245 1 127 1.25e-21 95.1
MS.gene05570.t1 MTR_6g012180 40.187 107 63 1 123 228 3 109 1.35e-21 95.5
MS.gene05570.t1 MTR_5g078800 42.308 104 59 1 132 234 7 110 1.70e-21 94.0
MS.gene05570.t1 MTR_4g057635 40.171 117 67 3 120 234 1 116 1.74e-21 95.1
MS.gene05570.t1 MTR_5g088610 43.636 110 58 3 128 234 5 113 1.84e-21 95.5
MS.gene05570.t1 MTR_5g078860 41.346 104 60 1 132 234 7 110 2.52e-21 94.4
MS.gene05570.t1 MTR_1g086530 34.028 144 89 3 134 275 35 174 2.90e-21 93.6
MS.gene05570.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 3.19e-21 96.3
MS.gene05570.t1 MTR_2g067420 40.909 110 63 2 121 229 4 112 3.41e-21 94.4
MS.gene05570.t1 MTR_3g103570 39.370 127 73 4 120 244 1 125 4.89e-21 94.4
MS.gene05570.t1 MTR_7g087130 37.069 116 72 1 123 237 3 118 6.76e-21 93.6
MS.gene05570.t1 MTR_1g008970 40.602 133 52 2 97 229 81 186 6.78e-21 92.0
MS.gene05570.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 7.32e-21 94.4
MS.gene05570.t1 MTR_7g061550 31.351 185 115 3 134 312 7 185 1.01e-20 93.6
MS.gene05570.t1 MTR_1g017000 38.835 103 61 2 134 234 14 116 1.09e-20 91.3
MS.gene05570.t1 MTR_2g088170 50.000 106 49 3 132 234 29 133 1.19e-20 94.4
MS.gene05570.t1 MTR_7g111290 56.452 62 27 0 167 228 6 67 2.21e-20 92.4
MS.gene05570.t1 MTR_8g468380 38.532 109 60 1 137 238 25 133 3.31e-20 92.8
MS.gene05570.t1 MTR_0193s0090 41.584 101 58 1 134 233 9 109 3.43e-20 89.0
MS.gene05570.t1 MTR_8g060940 42.268 97 55 1 134 229 9 105 3.52e-20 89.7
MS.gene05570.t1 MTR_6g090405 37.607 117 70 3 120 234 1 116 4.58e-20 89.7
MS.gene05570.t1 MTR_7g102110 36.486 148 83 6 120 261 1 143 4.76e-20 90.1
MS.gene05570.t1 MTR_5g078930 37.607 117 72 1 134 249 11 127 7.73e-20 88.2
MS.gene05570.t1 MTR_4g128190 42.718 103 46 3 132 233 11 101 1.28e-19 88.2
MS.gene05570.t1 MTR_1g086510 39.252 107 64 1 134 239 23 129 3.52e-19 87.4
MS.gene05570.t1 MTR_4g128670 40.179 112 64 3 120 229 1 111 5.41e-19 88.2
MS.gene05570.t1 MTR_4g063100 46.575 73 39 0 167 239 14 86 1.03e-18 85.1
MS.gene05570.t1 MTR_6g055910 43.038 79 45 0 167 245 21 99 3.02e-18 84.3
MS.gene05570.t1 MTR_2g033170 41.414 99 57 1 130 227 22 120 3.61e-18 85.5
MS.gene05570.t1 MTR_7g035300 43.210 81 45 1 170 250 101 180 8.13e-18 82.8
MS.gene05570.t1 MTR_7g109320 44.444 117 61 3 120 234 1 115 1.06e-17 84.7
MS.gene05570.t1 MTR_3g045430 36.923 130 77 4 131 258 11 137 1.09e-17 83.6
MS.gene05570.t1 MTR_2g096380 41.975 81 47 0 167 247 23 103 3.89e-17 80.5
MS.gene05570.t1 MTR_5g007300 40.260 77 45 1 132 207 64 140 2.16e-14 70.5
MS.gene05570.t1 MTR_1g085880 40.566 106 60 3 132 234 11 116 4.48e-14 71.2
MS.gene05570.t1 MTR_1g085770 40.000 100 58 2 137 234 17 116 1.30e-13 71.6
MS.gene05570.t1 MTR_6g080360 37.113 97 60 1 131 227 476 571 1.79e-13 73.2
MS.gene05570.t1 MTR_6g080360 37.234 94 58 1 134 227 530 622 8.36e-12 68.2
MS.gene05570.t1 MTR_6g080360 37.113 97 60 1 131 227 256 351 4.41e-13 72.0
MS.gene05570.t1 MTR_6g080360 37.234 94 58 1 134 227 310 402 1.86e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05570.t1 AT5G11050 39.254 456 185 13 23 445 16 412 7.10e-83 261
MS.gene05570.t1 AT5G58850 37.473 467 190 15 23 445 11 419 5.06e-78 249
MS.gene05570.t1 AT4G18770 67.391 138 40 1 125 262 208 340 3.68e-60 202
MS.gene05570.t1 AT3G27785 59.459 148 47 2 122 263 177 317 7.94e-54 186
MS.gene05570.t1 AT5G40360 54.615 130 56 1 134 263 158 284 1.69e-47 167
MS.gene05570.t1 AT3G09370 48.466 163 79 1 123 285 132 289 2.19e-41 154
MS.gene05570.t1 AT3G09370 48.447 161 78 1 125 285 126 281 2.83e-41 154
MS.gene05570.t1 AT3G09370 48.447 161 78 1 125 285 121 276 2.91e-41 154
MS.gene05570.t1 AT5G02320 60.714 112 44 0 123 234 56 167 1.58e-40 151
MS.gene05570.t1 AT5G02320 60.909 110 43 0 125 234 118 227 1.58e-40 152
MS.gene05570.t1 AT5G02320 60.909 110 43 0 125 234 118 227 1.58e-40 152
MS.gene05570.t1 AT2G25230 46.309 149 74 2 115 263 8 150 1.96e-38 139
MS.gene05570.t1 AT5G11510 52.679 112 53 0 123 234 70 181 9.55e-37 143
MS.gene05570.t1 AT5G11510 52.679 112 53 0 123 234 70 181 1.09e-36 143
MS.gene05570.t1 AT5G11510 52.679 112 53 0 123 234 70 181 1.13e-36 144
MS.gene05570.t1 AT5G11510 52.679 112 53 0 123 234 70 181 1.13e-36 144
MS.gene05570.t1 AT5G11510 52.679 112 53 0 123 234 70 181 1.13e-36 144
MS.gene05570.t1 AT4G32730 51.786 112 54 0 123 234 76 187 8.79e-36 141
MS.gene05570.t1 AT4G32730 51.786 112 54 0 123 234 76 187 8.79e-36 141
MS.gene05570.t1 AT4G32730 51.786 112 54 0 123 234 76 187 8.79e-36 141
MS.gene05570.t1 AT4G32730 51.786 112 54 0 123 234 76 187 8.79e-36 141
MS.gene05570.t1 AT4G32730 51.786 112 54 0 123 234 76 187 9.26e-36 140
MS.gene05570.t1 AT5G40430 44.604 139 71 3 125 263 45 177 3.15e-35 131
MS.gene05570.t1 AT3G55730 53.846 104 48 0 131 234 53 156 2.94e-32 127
MS.gene05570.t1 AT3G28470 45.255 137 71 3 123 258 3 136 2.19e-31 122
MS.gene05570.t1 AT1G17950 35.829 187 112 3 134 318 5 185 3.85e-31 120
MS.gene05570.t1 AT4G00540 55.357 112 47 1 126 234 95 206 8.69e-31 123
MS.gene05570.t1 AT1G69560 43.885 139 75 1 115 250 104 242 9.33e-31 122
MS.gene05570.t1 AT1G69560 43.885 139 75 1 115 250 88 226 9.73e-31 121
MS.gene05570.t1 AT1G09540 37.931 174 104 3 132 303 12 183 1.37e-30 121
MS.gene05570.t1 AT4G00540 55.357 112 47 1 126 234 93 204 2.21e-30 122
MS.gene05570.t1 AT3G09230 50.980 102 50 0 133 234 54 155 5.90e-30 120
MS.gene05570.t1 AT1G57560 35.638 188 112 4 132 311 12 198 1.91e-29 116
MS.gene05570.t1 AT3G50060 46.154 104 56 0 133 236 5 108 3.71e-29 116
MS.gene05570.t1 AT1G66230 36.946 203 119 7 120 318 1 198 4.31e-29 115
MS.gene05570.t1 AT1G26780 31.034 261 150 5 132 389 96 329 5.14e-29 117
MS.gene05570.t1 AT1G57560 48.624 109 53 2 132 238 12 119 5.80e-29 116
MS.gene05570.t1 AT5G26660 47.414 116 57 3 132 245 12 125 6.09e-29 117
MS.gene05570.t1 AT1G26780 48.246 114 56 1 132 242 96 209 7.48e-29 115
MS.gene05570.t1 AT1G63910 41.667 132 71 2 134 264 14 140 1.14e-28 116
MS.gene05570.t1 AT2G39880 49.038 104 53 0 131 234 47 150 1.21e-28 116
MS.gene05570.t1 AT5G67300 47.059 102 54 0 133 234 5 106 1.31e-28 115
MS.gene05570.t1 AT3G12720 46.602 103 52 2 134 234 24 125 1.84e-28 114
MS.gene05570.t1 AT4G37260 47.115 104 55 0 133 236 12 115 1.87e-28 114
MS.gene05570.t1 AT3G29020 43.333 120 68 0 134 253 65 184 2.30e-28 112
MS.gene05570.t1 AT4G33450 49.074 108 52 1 131 235 16 123 2.69e-28 112
MS.gene05570.t1 AT3G11440 42.969 128 65 3 111 236 26 147 3.39e-28 116
MS.gene05570.t1 AT1G18570 43.750 128 70 2 122 248 3 129 4.77e-28 114
MS.gene05570.t1 AT4G26930 42.975 121 57 2 114 233 12 121 6.31e-28 114
MS.gene05570.t1 AT3G13890 45.098 102 55 1 134 234 14 115 6.53e-28 114
MS.gene05570.t1 AT4G01680 46.154 104 55 1 132 234 12 115 7.64e-28 113
MS.gene05570.t1 AT4G05100 43.966 116 64 1 120 234 1 116 8.00e-28 113
MS.gene05570.t1 AT4G28110 47.059 102 53 1 134 234 14 115 9.54e-28 112
MS.gene05570.t1 AT3G11440 42.969 128 65 3 111 236 26 147 1.05e-27 116
MS.gene05570.t1 AT3G11440 42.969 128 65 3 111 236 26 147 1.05e-27 116
MS.gene05570.t1 AT3G11440 42.969 128 65 3 111 236 26 147 1.05e-27 116
MS.gene05570.t1 AT3G29020 43.333 120 68 0 134 253 67 186 1.21e-27 112
MS.gene05570.t1 AT4G01680 46.154 104 55 1 132 234 12 115 1.22e-27 110
MS.gene05570.t1 AT5G35550 42.105 133 70 2 113 244 1 127 1.27e-27 111
MS.gene05570.t1 AT2G23290 47.115 104 55 0 133 236 12 115 1.43e-27 112
MS.gene05570.t1 AT1G74430 41.406 128 73 2 131 257 11 137 1.85e-27 110
MS.gene05570.t1 AT4G12350 44.444 117 61 3 120 234 1 115 1.92e-27 111
MS.gene05570.t1 AT3G13890 42.342 111 54 2 134 234 14 124 4.36e-27 112
MS.gene05570.t1 AT5G14750 48.454 97 49 1 134 229 18 114 4.58e-27 108
MS.gene05570.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.61e-27 111
MS.gene05570.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.61e-27 111
MS.gene05570.t1 AT4G21440 46.154 104 55 1 132 234 12 115 4.77e-27 111
MS.gene05570.t1 AT5G16770 43.103 116 64 2 120 234 1 115 6.02e-27 110
MS.gene05570.t1 AT5G16770 43.103 116 64 2 120 234 1 115 6.02e-27 110
MS.gene05570.t1 AT5G06100 47.222 108 55 2 131 236 31 138 9.11e-27 112
MS.gene05570.t1 AT3G61250 37.059 170 102 4 120 287 1 167 9.59e-27 109
MS.gene05570.t1 AT5G17800 45.217 115 61 1 134 246 93 207 9.71e-27 110
MS.gene05570.t1 AT4G38620 46.602 103 52 2 134 234 14 115 1.13e-26 108
MS.gene05570.t1 AT4G01680 43.103 116 53 2 132 234 12 127 1.25e-26 110
MS.gene05570.t1 AT3G53200 32.995 197 118 4 131 320 8 197 1.29e-26 107
MS.gene05570.t1 AT3G02940 43.103 116 64 2 120 234 1 115 1.86e-26 108
MS.gene05570.t1 AT5G10280 44.444 117 61 3 120 234 1 115 1.90e-26 109
MS.gene05570.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.23e-26 112
MS.gene05570.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.23e-26 112
MS.gene05570.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.23e-26 112
MS.gene05570.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.23e-26 112
MS.gene05570.t1 AT4G22680 43.590 117 62 3 120 234 1 115 2.29e-26 107
MS.gene05570.t1 AT1G73410 51.402 107 49 1 134 237 6 112 2.37e-26 107
MS.gene05570.t1 AT5G12870 45.714 105 56 1 134 237 20 124 2.50e-26 108
MS.gene05570.t1 AT5G40330 34.078 179 96 4 134 311 14 171 2.53e-26 106
MS.gene05570.t1 AT5G65230 44.444 117 61 3 120 234 1 115 3.04e-26 108
MS.gene05570.t1 AT3G02940 43.103 116 64 2 120 234 1 115 3.06e-26 108
MS.gene05570.t1 AT3G02940 43.103 116 64 2 120 234 1 115 3.06e-26 108
MS.gene05570.t1 AT1G73410 51.402 107 49 1 134 237 6 112 3.16e-26 105
MS.gene05570.t1 AT3G08500 47.115 104 54 1 132 234 30 133 3.85e-26 108
MS.gene05570.t1 AT5G15310 45.045 111 59 2 120 229 1 110 3.89e-26 106
MS.gene05570.t1 AT5G15310 43.103 116 64 2 120 234 1 115 3.98e-26 108
MS.gene05570.t1 AT5G15310 43.103 116 64 2 120 234 1 115 4.70e-26 108
MS.gene05570.t1 AT4G09460 31.319 182 114 3 134 305 14 194 5.55e-26 105
MS.gene05570.t1 AT2G26960 45.192 104 56 1 131 233 19 122 7.05e-26 109
MS.gene05570.t1 AT1G74080 48.485 99 50 1 132 229 12 110 8.07e-26 107
MS.gene05570.t1 AT5G55020 44.660 103 56 1 132 233 26 128 9.56e-26 110
MS.gene05570.t1 AT3G01140 43.103 116 64 2 120 234 1 115 1.03e-25 107
MS.gene05570.t1 AT5G56110 42.647 136 74 3 134 268 14 146 1.11e-25 107
MS.gene05570.t1 AT2G32460 46.296 108 54 3 132 236 6 112 1.22e-25 109
MS.gene05570.t1 AT2G32460 46.296 108 54 3 132 236 18 124 1.34e-25 109
MS.gene05570.t1 AT3G24310 44.000 125 62 3 134 256 20 138 1.48e-25 105
MS.gene05570.t1 AT3G27920 46.392 97 51 1 134 229 16 112 1.82e-25 104
MS.gene05570.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.86e-25 107
MS.gene05570.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.94e-25 107
MS.gene05570.t1 AT1G22640 44.660 103 54 2 134 234 14 115 2.13e-25 104
MS.gene05570.t1 AT3G23250 32.663 199 118 6 120 312 1 189 2.24e-25 105
MS.gene05570.t1 AT1G06180 33.019 212 114 8 120 324 1 191 3.15e-25 103
MS.gene05570.t1 AT3G01140 45.192 104 56 1 132 234 55 158 4.07e-25 106
MS.gene05570.t1 AT3G13540 40.833 120 69 2 127 245 18 136 4.18e-25 103
MS.gene05570.t1 AT5G16600 45.000 120 62 3 120 237 1 118 4.23e-25 105
MS.gene05570.t1 AT1G35515 42.157 102 58 1 134 234 14 115 4.31e-25 102
MS.gene05570.t1 AT5G54230 44.118 102 56 1 134 234 14 115 4.37e-25 105
MS.gene05570.t1 AT5G07690 42.609 115 64 2 120 233 1 114 5.99e-25 105
MS.gene05570.t1 AT5G07700 41.379 116 66 2 120 234 1 115 6.24e-25 105
MS.gene05570.t1 AT5G07700 41.379 116 66 2 120 234 1 115 6.24e-25 105
MS.gene05570.t1 AT1G34670 41.379 116 66 2 120 234 1 115 1.16e-24 105
MS.gene05570.t1 AT5G61420 41.379 116 66 2 120 234 1 115 1.54e-24 104
MS.gene05570.t1 AT5G60890 45.098 102 55 1 134 234 14 115 1.57e-24 103
MS.gene05570.t1 AT5G59780 42.982 114 60 3 134 245 10 120 1.86e-24 101
MS.gene05570.t1 AT5G52600 31.414 191 114 3 134 323 14 188 2.19e-24 100
MS.gene05570.t1 AT4G34990 44.118 102 56 1 134 234 14 115 2.68e-24 102
MS.gene05570.t1 AT3G46130 44.444 108 57 2 134 239 11 117 2.72e-24 101
MS.gene05570.t1 AT5G62320 32.828 198 113 6 121 302 3 196 3.54e-24 101
MS.gene05570.t1 AT2G26950 41.071 112 57 2 131 237 15 122 3.81e-24 103
MS.gene05570.t1 AT2G16720 42.718 103 56 2 134 234 14 115 5.95e-24 101
MS.gene05570.t1 AT3G48920 41.322 121 64 2 134 247 20 140 7.25e-24 100
MS.gene05570.t1 AT3G01530 35.714 168 93 5 134 294 27 186 1.18e-23 98.6
MS.gene05570.t1 AT4G13480 43.200 125 63 3 134 256 8 126 1.63e-23 99.8
MS.gene05570.t1 AT2G47190 44.118 102 56 1 134 234 22 123 1.88e-23 99.8
MS.gene05570.t1 AT5G62470 37.302 126 79 0 123 248 3 128 2.02e-23 101
MS.gene05570.t1 AT2G31180 30.453 243 140 8 120 335 1 241 2.37e-23 99.0
MS.gene05570.t1 AT3G30210 40.310 129 65 3 134 251 29 156 3.65e-23 99.0
MS.gene05570.t1 AT1G18710 41.593 113 64 2 134 245 14 125 4.05e-23 98.6
MS.gene05570.t1 AT3G60460 48.039 102 51 2 134 233 13 114 4.73e-23 99.4
MS.gene05570.t1 AT5G57620 39.850 133 74 4 120 247 1 132 8.33e-23 99.4
MS.gene05570.t1 AT5G39700 44.444 99 55 0 135 233 57 155 9.92e-23 95.5
MS.gene05570.t1 AT3G47600 29.843 191 126 2 123 305 3 193 1.19e-22 99.0
MS.gene05570.t1 AT4G25560 44.118 102 56 1 134 234 12 113 2.02e-22 97.1
MS.gene05570.t1 AT3G27810 37.410 139 78 2 134 271 22 152 2.22e-22 95.5
MS.gene05570.t1 AT1G74650 39.823 113 67 1 123 234 3 115 2.59e-22 97.8
MS.gene05570.t1 AT5G23000 41.880 117 65 3 120 234 1 116 3.18e-22 97.4
MS.gene05570.t1 AT5G35550 50.000 78 39 0 167 244 53 130 3.40e-22 95.9
MS.gene05570.t1 AT1G08810 34.228 149 96 2 123 269 3 151 6.65e-22 95.5
MS.gene05570.t1 AT5G62470 37.008 127 79 1 123 248 3 129 6.68e-22 97.1
MS.gene05570.t1 AT5G26660 49.367 79 39 1 167 245 17 94 7.07e-22 96.3
MS.gene05570.t1 AT5G49330 41.379 116 66 2 120 234 1 115 7.31e-22 96.7
MS.gene05570.t1 AT5G40350 42.149 121 65 2 134 253 19 135 1.12e-21 93.2
MS.gene05570.t1 AT1G56160 40.777 103 58 2 134 234 16 117 1.13e-21 95.1
MS.gene05570.t1 AT1G68320 32.258 186 115 5 132 310 19 200 1.30e-21 94.7
MS.gene05570.t1 AT3G62610 41.379 116 66 2 120 234 1 115 1.74e-21 95.5
MS.gene05570.t1 AT1G48000 33.987 153 92 2 134 285 34 178 2.06e-21 93.2
MS.gene05570.t1 AT3G49690 41.129 124 68 4 120 239 1 123 2.10e-21 94.7
MS.gene05570.t1 AT1G25340 44.660 103 54 2 134 234 20 121 2.60e-21 94.0
MS.gene05570.t1 AT1G16490 29.439 214 129 5 113 324 1 194 2.92e-21 93.6
MS.gene05570.t1 AT1G79180 30.392 204 103 5 113 314 1 167 3.00e-21 94.0
MS.gene05570.t1 AT3G28910 39.655 116 69 1 123 237 3 118 3.52e-21 94.4
MS.gene05570.t1 AT1G66370 38.211 123 70 2 120 241 1 118 6.52e-21 92.0
MS.gene05570.t1 AT5G65790 41.129 124 68 4 120 239 1 123 7.31e-21 94.4
MS.gene05570.t1 AT2G47460 39.655 116 68 2 120 234 1 115 1.12e-20 93.6
MS.gene05570.t1 AT5G14340 30.638 235 123 6 120 316 13 245 1.26e-20 92.0
MS.gene05570.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.29e-20 94.4
MS.gene05570.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.29e-20 94.4
MS.gene05570.t1 AT3G12820 38.655 119 70 2 122 238 4 121 1.34e-20 90.9
MS.gene05570.t1 AT2G02820 40.816 98 58 0 137 234 33 130 1.55e-20 94.4
MS.gene05570.t1 AT1G25340 41.584 101 55 1 134 234 20 116 1.77e-20 91.7
MS.gene05570.t1 AT2G02820 40.816 98 58 0 137 234 33 130 1.94e-20 94.0
MS.gene05570.t1 AT2G02820 43.956 91 51 0 137 227 33 123 2.54e-20 92.0
MS.gene05570.t1 AT5G52260 43.103 116 59 3 121 234 5 115 3.49e-20 90.5
MS.gene05570.t1 AT1G25340 41.584 101 55 1 134 234 20 116 4.23e-20 90.9
MS.gene05570.t1 AT3G53200 32.704 159 96 2 167 320 12 164 4.26e-20 88.6
MS.gene05570.t1 AT4G37780 34.677 124 78 3 120 241 1 123 4.76e-20 90.9
MS.gene05570.t1 AT5G14750 50.794 63 31 0 167 229 18 80 5.67e-20 87.4
MS.gene05570.t1 AT2G37630 35.036 137 84 2 136 267 6 142 6.22e-20 91.3
MS.gene05570.t1 AT5G49620 33.544 158 96 2 134 290 28 177 1.05e-19 89.7
MS.gene05570.t1 AT1G66380 46.078 102 54 1 128 228 4 105 1.22e-19 85.5
MS.gene05570.t1 AT1G56650 45.631 103 55 1 128 229 4 106 2.68e-19 87.4
MS.gene05570.t1 AT1G66390 46.078 102 54 1 128 228 4 105 1.58e-18 85.1
MS.gene05570.t1 AT3G06490 43.878 98 52 2 132 227 19 115 1.95e-18 86.3
MS.gene05570.t1 AT1G79180 27.442 215 92 4 134 314 16 200 7.69e-18 84.7
MS.gene05570.t1 AT3G27810 39.048 105 56 1 167 271 7 103 8.30e-18 81.3
MS.gene05570.t1 AT2G36890 36.752 117 71 3 120 234 1 116 1.81e-17 83.2
MS.gene05570.t1 AT5G59780 44.304 79 42 1 167 245 23 99 2.01e-17 81.3
MS.gene05570.t1 AT5G40350 45.977 87 43 1 167 253 8 90 2.86e-17 79.7
MS.gene05570.t1 AT2G36890 36.752 117 71 3 120 234 42 157 3.70e-17 82.8
MS.gene05570.t1 AT3G46130 45.205 73 40 0 167 239 23 95 4.74e-17 80.9
MS.gene05570.t1 AT3G46130 45.205 73 40 0 167 239 13 85 4.74e-17 80.5
MS.gene05570.t1 AT3G47600 45.000 80 43 1 167 246 42 120 5.25e-17 82.4
MS.gene05570.t1 AT5G49620 30.814 172 96 3 134 290 28 191 1.74e-16 80.5
MS.gene05570.t1 AT3G12820 45.833 72 39 0 167 238 2 73 3.33e-16 77.0
MS.gene05570.t1 AT3G18100 36.735 98 60 2 131 227 492 588 8.52e-15 77.4
MS.gene05570.t1 AT3G18100 36.170 94 60 0 134 227 546 639 5.08e-14 75.1
MS.gene05570.t1 AT1G22640 47.368 57 30 0 178 234 2 58 1.16e-14 72.8
MS.gene05570.t1 AT3G18100 36.735 98 60 2 131 227 444 540 1.24e-14 76.6
MS.gene05570.t1 AT3G18100 36.170 94 60 0 134 227 498 591 6.90e-14 74.3
MS.gene05570.t1 AT3G18100 36.735 98 60 2 131 227 331 427 1.58e-14 76.3
MS.gene05570.t1 AT3G18100 36.170 94 60 0 134 227 385 478 9.25e-14 73.9
MS.gene05570.t1 AT3G18100 36.735 98 60 2 131 227 279 375 1.94e-14 75.9
MS.gene05570.t1 AT3G18100 36.170 94 60 0 134 227 333 426 1.12e-13 73.6
MS.gene05570.t1 AT1G71030 40.000 65 39 0 170 234 5 69 1.99e-14 71.6
MS.gene05570.t1 AT3G23250 30.935 139 84 3 178 312 2 132 2.23e-14 72.8
MS.gene05570.t1 AT1G71030 40.000 65 39 0 170 234 19 83 2.26e-14 72.0
MS.gene05570.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.12e-14 70.1
MS.gene05570.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.12e-14 70.1
MS.gene05570.t1 AT1G66380 49.206 63 32 0 167 229 11 73 7.10e-13 65.1
MS.gene05570.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.77e-11 66.2
MS.gene05570.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.77e-11 66.2

Find 101 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTTGGTTTAGGGTAAT+TGG 0.208552 3.2:+54200545 None:intergenic
CTCTTCAAACCCTTACTCTT+TGG 0.235684 3.2:-54200643 MS.gene05570:CDS
CTGCCATTGATAGATTCTTA+TGG 0.247531 3.2:-54203482 MS.gene05570:CDS
AGGGTTTGAAGAGGGTTTCT+TGG 0.262586 3.2:+54200653 None:intergenic
GAATCTGATTACTGTTAGTT+TGG 0.268681 3.2:+54200610 None:intergenic
TTCTTGGAGTAGGGGTTAAC+AGG 0.288498 3.2:+54200669 None:intergenic
GAAGGTAGTGATCAGAATTA+AGG 0.315331 3.2:+54200475 None:intergenic
GAAGAGGGTTTCTTGGAGTA+GGG 0.325395 3.2:+54200660 None:intergenic
GAAGAGAGAGATGGATTTGT+TGG 0.339685 3.2:-54200379 MS.gene05570:CDS
TGCCATTGATAGATTCTTAT+GGG 0.346398 3.2:-54203481 MS.gene05570:CDS
GGCATCATATTATTATTATT+AGG 0.352512 3.2:+54203354 None:intergenic
ATTGCATTCTCAGTTCTTCC+TGG 0.352568 3.2:+54201029 None:intergenic
ATCACTGGAATGCAACAAAA+AGG 0.355603 3.2:-54201001 MS.gene05570:CDS
CTCCCTGATGTTACTGATTG+TGG 0.355914 3.2:-54200588 MS.gene05570:CDS
TAGCTTTGTTGATCAGCTAT+TGG 0.363373 3.2:-54203322 MS.gene05570:CDS
GAAGATGTGATCAATGGTTT+AGG 0.363560 3.2:-54203243 MS.gene05570:CDS
AGAGATGGATTTGTTGGAGT+TGG 0.366710 3.2:-54200373 MS.gene05570:CDS
GATCAAAATATTTATAGCTT+TGG 0.368101 3.2:-54203411 MS.gene05570:CDS
GAAAATTTCATGAAACCAAT+TGG 0.372690 3.2:-54203570 None:intergenic
TGGAATTCTCTTTGCTATCT+CGG 0.383698 3.2:+54201049 None:intergenic
AAGTGACATACTTTGATATC+AGG 0.394233 3.2:+54202474 None:intergenic
ATTAGGCCACATAAAACTAT+AGG 0.401368 3.2:+54203371 None:intergenic
AATCTGATTACTGTTAGTTT+GGG 0.404398 3.2:+54200611 None:intergenic
ATCACCAACCACTCTTCTAT+TGG 0.413518 3.2:-54203516 MS.gene05570:CDS
AGCAATATGGTGTAAGAAAA+TGG 0.419388 3.2:-54202569 MS.gene05570:CDS
CCACCAATACGTACTCCAAT+TGG 0.419604 3.2:+54203555 None:intergenic
TTTAGGGTAATTGGAAGGAT+TGG 0.423178 3.2:+54200554 None:intergenic
TGAAGAGGGTTTCTTGGAGT+AGG 0.427723 3.2:+54200659 None:intergenic
AACAATGTGGAGTTGCATCT+TGG 0.428463 3.2:-54200423 MS.gene05570:CDS
GAAGAATAATCCAAAGAGTA+AGG 0.430775 3.2:+54200633 None:intergenic
GAGATAGCAAAGAGAATTCC+AGG 0.435448 3.2:-54201047 MS.gene05570:CDS
CTGAAGTTGGTGAAGCAATA+TGG 0.437823 3.2:-54202582 MS.gene05570:CDS
ACAATGTGGAGTTGCATCTT+GGG 0.440360 3.2:-54200422 MS.gene05570:CDS
CAAATGAAGAGGTGATGAAT+TGG 0.443517 3.2:-54203299 MS.gene05570:CDS
GTCTCAAATAGCTGAGAAGT+TGG 0.449298 3.2:-54202547 MS.gene05570:CDS
ATATATTGCAGAAAGATAGT+TGG 0.454720 3.2:-54201130 MS.gene05570:intron
AAGGAAGATTGGTTTGAAGA+AGG 0.458004 3.2:+54200804 None:intergenic
TTCTGAATTCCGTTCAGCAT+TGG 0.463683 3.2:+54200450 None:intergenic
TGGCATGATTGGTAATCGTT+GGG 0.467018 3.2:-54201072 MS.gene05570:CDS
ATTCAAAGAGAAAGAACAAA+AGG 0.472167 3.2:-54200971 MS.gene05570:CDS
GAATTAAGGTAATTCATCAT+AGG 0.473352 3.2:+54200489 None:intergenic
AGGAAGATTGGTTTGAAGAA+GGG 0.477815 3.2:+54200805 None:intergenic
AATCCACAATCAGTAACATC+AGG 0.481489 3.2:+54200585 None:intergenic
TCAAAGGAAATTGCTGAAGT+TGG 0.481875 3.2:-54202595 MS.gene05570:intron
TCTTTCTCCACACACAATGA+AGG 0.482009 3.2:+54203264 None:intergenic
GTTGAAACTCATGGCATGAT+TGG 0.490352 3.2:-54201083 MS.gene05570:CDS
GGAAAGGGTGCAAAAGTGGT+TGG 0.491374 3.2:-54203222 MS.gene05570:CDS
AGAATGCAATAAAGAATCAC+TGG 0.494713 3.2:-54201016 MS.gene05570:CDS
GAGAAGTTGGAAGGAAGAGC+TGG 0.505174 3.2:-54202534 MS.gene05570:CDS
GGTTTACCATCAGTGGTTTG+AGG 0.505708 3.2:+54200948 None:intergenic
GAAAGCAGTGTAGGGAAAGA+TGG 0.507446 3.2:-54202512 MS.gene05570:CDS
TTTAGGAAAGGGTGCAAAAG+TGG 0.509549 3.2:-54203226 MS.gene05570:CDS
ATGGCATGATTGGTAATCGT+TGG 0.511958 3.2:-54201073 MS.gene05570:CDS
TGAAAAGTTGTTGCATGAAG+AGG 0.512671 3.2:+54200712 None:intergenic
GTTGGAGTGAAGAAGAAGAA+AGG 0.512967 3.2:-54201112 MS.gene05570:CDS
TGAATTCCGTTCAGCATTGG+AGG 0.514414 3.2:+54200453 None:intergenic
AAACCAATTGGAGTACGTAT+TGG 0.519717 3.2:-54203558 MS.gene05570:CDS
GTGATCAATGGTTTAGGAAA+GGG 0.521321 3.2:-54203237 MS.gene05570:CDS
GAAGAGCTGGAAAGCAGTGT+AGG 0.523888 3.2:-54202521 MS.gene05570:CDS
AGCAGTAGTAGCAGTAGTAC+CGG 0.528553 3.2:+54200869 None:intergenic
AAGAGGGTTTCTTGGAGTAG+GGG 0.530916 3.2:+54200661 None:intergenic
TCTTGAAGAATTGAAGATTG+TGG 0.532267 3.2:+54200927 None:intergenic
AGTCCACTGTCCTTTGATCA+AGG 0.536979 3.2:+54203170 None:intergenic
CCAATTGGAGTACGTATTGG+TGG 0.542694 3.2:-54203555 MS.gene05570:CDS
AAGAGCTGGAAAGCAGTGTA+GGG 0.544280 3.2:-54202520 MS.gene05570:CDS
TGTGATCAATGGTTTAGGAA+AGG 0.553466 3.2:-54203238 MS.gene05570:CDS
GGGAATATGAATTTCTCAGA+GGG 0.558195 3.2:-54200402 MS.gene05570:CDS
ACCCCATAAGAATCTATCAA+TGG 0.560596 3.2:+54203479 None:intergenic
AGATTGTGGTTTACCATCAG+TGG 0.561412 3.2:+54200941 None:intergenic
TTCCGTTCAGCATTGGAGGA+AGG 0.564838 3.2:+54200457 None:intergenic
AAAGAGTAAGGGTTTGAAGA+GGG 0.566918 3.2:+54200645 None:intergenic
ACAAATTCCTTCATTGTGTG+TGG 0.567848 3.2:-54203271 MS.gene05570:CDS
TCATAAGATTCAGATATAAG+TGG 0.570449 3.2:+54200744 None:intergenic
CTCAGAGGGGAAGAGAGAGA+TGG 0.571224 3.2:-54200388 MS.gene05570:CDS
AATCTATCAATGGCAGTCAA+AGG 0.571369 3.2:+54203489 None:intergenic
AAGAATAATCCAAAGAGTAA+GGG 0.575024 3.2:+54200634 None:intergenic
TTTGGTTTAGGGTAATTGGA+AGG 0.578739 3.2:+54200549 None:intergenic
CAAATAGCTGAGAAGTTGGA+AGG 0.580510 3.2:-54202543 MS.gene05570:CDS
GAGAAAGAAGATGTGATCAA+TGG 0.586526 3.2:-54203249 MS.gene05570:CDS
CAAAGAGTAAGGGTTTGAAG+AGG 0.591380 3.2:+54200644 None:intergenic
TACCTTCCTCCAATGCTGAA+CGG 0.597344 3.2:-54200459 MS.gene05570:CDS
GTCCTCAGAGATCGCTGACA+CGG 0.599223 3.2:+54200827 None:intergenic
AGTGGACTGATGAAGAAGAC+AGG 0.601588 3.2:-54203155 MS.gene05570:intron
AGGACCAATAGAAGAGTGGT+TGG 0.605891 3.2:+54203512 None:intergenic
TTTCCTTGATCAAAGGACAG+TGG 0.611527 3.2:-54203173 MS.gene05570:CDS
AGGATGCTTGTTGAAACTCA+TGG 0.613876 3.2:-54201092 MS.gene05570:CDS
AAGGTAATTCATCATAGGTG+TGG 0.625090 3.2:+54200494 None:intergenic
AAAAGGCCTCAAACCACTGA+TGG 0.628725 3.2:-54200954 MS.gene05570:CDS
TCAGCTATTGGCAAATGAAG+AGG 0.629014 3.2:-54203310 MS.gene05570:CDS
TCAACAAAGCTAGCTTCTTG+AGG 0.634219 3.2:+54203333 None:intergenic
AGTAGTAGCAGTAGTACCGG+TGG 0.639437 3.2:+54200872 None:intergenic
GCCATTGATAGATTCTTATG+GGG 0.643647 3.2:-54203480 MS.gene05570:CDS
ATCCACAATCAGTAACATCA+GGG 0.650690 3.2:+54200586 None:intergenic
CTATCAATGGCAGTCAAAGG+AGG 0.652795 3.2:+54203492 None:intergenic
AAAGATGGCATAATCATCTG+AGG 0.662817 3.2:-54202497 MS.gene05570:CDS
CTCCGTGTCAGCGATCTCTG+AGG 0.667016 3.2:-54200829 MS.gene05570:CDS
AAGGAGGACCAATAGAAGAG+TGG 0.673968 3.2:+54203508 None:intergenic
TGGGAATATGAATTTCTCAG+AGG 0.674443 3.2:-54200403 MS.gene05570:CDS
GGAATATGAATTTCTCAGAG+GGG 0.702999 3.2:-54200401 MS.gene05570:CDS
ATTGGAGTACGTATTGGTGG+TGG 0.703614 3.2:-54203552 MS.gene05570:CDS
AATTCAGAATCAGAACAATG+TGG 0.732480 3.2:-54200436 MS.gene05570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTATTTTTTTTAAAA+CGG - chr3.2:54202663-54202682 MS.gene05570:intron 0.0%
!!! TATTTTTAATAATATATATT+TGG - chr3.2:54201138-54201157 MS.gene05570:intron 0.0%
!!! TTTTTTTAATAATATATATT+TGG - chr3.2:54201107-54201126 MS.gene05570:CDS 0.0%
!! AAATATATTGAAAAAATTGA+AGG + chr3.2:54201470-54201489 None:intergenic 10.0%
!! ATATTGATAAGTAAAAATAA+AGG + chr3.2:54202628-54202647 None:intergenic 10.0%
!! TATTGATAAGTAAAAATAAA+GGG + chr3.2:54202627-54202646 None:intergenic 10.0%
!! TCCTTTAATAATATATATTT+GGG - chr3.2:54201253-54201272 MS.gene05570:intron 10.0%
!!! AAAATATAACTAAATTTTCT+AGG + chr3.2:54201944-54201963 None:intergenic 10.0%
!!! AAAATTTTTTAATTGTCTTT+TGG - chr3.2:54202387-54202406 MS.gene05570:intron 10.0%
!!! TTTATTTTTACTTATCAATA+TGG - chr3.2:54202627-54202646 MS.gene05570:intron 10.0%
!!! TTTTTATGATATTATATACT+TGG - chr3.2:54200949-54200968 MS.gene05570:CDS 10.0%
!! GTCCTTTAATAATATATATT+TGG - chr3.2:54201252-54201271 MS.gene05570:intron 15.0%
!!! AAATCATAGATAAATTTTCA+AGG + chr3.2:54201614-54201633 None:intergenic 15.0%
!!! ATATTTATCTTTTAAACTCT+TGG - chr3.2:54202038-54202057 MS.gene05570:intron 15.0%
!!! GTCTTGTTATATAAAAAAAA+TGG - chr3.2:54201174-54201193 MS.gene05570:intron 15.0%
!!! TATATTTGGACTAAATTTTA+AGG - chr3.2:54201152-54201171 MS.gene05570:intron 15.0%
!!! TATTTATCTTTTAAACTCTT+GGG - chr3.2:54202039-54202058 MS.gene05570:intron 15.0%
!!! TTGTTGTTATATAAAATCAA+AGG - chr3.2:54201300-54201319 MS.gene05570:intron 15.0%
!! ATTCATGTGAATGATAAATT+TGG + chr3.2:54201769-54201788 None:intergenic 20.0%
!! GATCAAAATATTTATAGCTT+TGG - chr3.2:54200500-54200519 MS.gene05570:CDS 20.0%
!! GCCCAAATATATATTATTAA+AGG + chr3.2:54201257-54201276 None:intergenic 20.0%
!! GGCATCATATTATTATTATT+AGG + chr3.2:54200560-54200579 None:intergenic 20.0%
!! TCATATCTTAAACTATCTTT+AGG + chr3.2:54202490-54202509 None:intergenic 20.0%
!! TGCAATATATAAAGTAAGTT+CGG + chr3.2:54202771-54202790 None:intergenic 20.0%
!!! TATATACTACTTTTTCAGAT+GGG - chr3.2:54202462-54202481 MS.gene05570:intron 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG - chr3.2:54201266-54201285 MS.gene05570:intron 20.0%
!!! TGTTCTATATTTTTTTTGAG+AGG + chr3.2:54201560-54201579 None:intergenic 20.0%
!!! TTTGTTGAAGTTTTTTTTGA+GGG + chr3.2:54200472-54200491 None:intergenic 20.0%
!!! TTTTGTTGAAGTTTTTTTTG+AGG + chr3.2:54200473-54200492 None:intergenic 20.0%
! AAACACTCAAACAACAATTA+GGG + chr3.2:54200795-54200814 None:intergenic 25.0%
! AAGAATAATCCAAAGAGTAA+GGG + chr3.2:54203280-54203299 None:intergenic 25.0%
! AGATAGGTTAGAAAAAACAA+AGG + chr3.2:54203129-54203148 None:intergenic 25.0%
! ATATATTGCAGAAAGATAGT+TGG - chr3.2:54202781-54202800 MS.gene05570:intron 25.0%
! ATGACAATAAATCCTAACTA+GGG + chr3.2:54202209-54202228 None:intergenic 25.0%
! ATGCAAGTCAATGATAAATT+TGG + chr3.2:54202120-54202139 None:intergenic 25.0%
! ATTCAAAGAGAAAGAACAAA+AGG - chr3.2:54202940-54202959 MS.gene05570:intron 25.0%
! GAAAGTCAAATGTTTGTAAA+TGG - chr3.2:54202705-54202724 MS.gene05570:intron 25.0%
! GAATTAAGGTAATTCATCAT+AGG + chr3.2:54203425-54203444 None:intergenic 25.0%
! GTATGTATTAATCTTTGACT+TGG + chr3.2:54202076-54202095 None:intergenic 25.0%
! GTCAAAGATTAATACATACA+AGG - chr3.2:54202077-54202096 MS.gene05570:intron 25.0%
! TAGAAAAAACAAAGGAAGAT+TGG + chr3.2:54203121-54203140 None:intergenic 25.0%
! TATACTTGGACTAAATTTGA+AGG - chr3.2:54200963-54200982 MS.gene05570:CDS 25.0%
! TATGACAATAAATCCTAACT+AGG + chr3.2:54202210-54202229 None:intergenic 25.0%
! TCATAAGATTCAGATATAAG+TGG + chr3.2:54203170-54203189 None:intergenic 25.0%
!! AATCTGATTACTGTTAGTTT+GGG + chr3.2:54203303-54203322 None:intergenic 25.0%
!! ATGATGAATTTTCATGAGAT+AGG + chr3.2:54203145-54203164 None:intergenic 25.0%
!!! ATTTTTCTAGGATCTATCTT+TGG - chr3.2:54201988-54202007 MS.gene05570:intron 25.0%
!!! CTATATACTACTTTTTCAGA+TGG - chr3.2:54202461-54202480 MS.gene05570:intron 25.0%
!!! GCATCTAATTTGATTTTTCT+AGG - chr3.2:54201976-54201995 MS.gene05570:intron 25.0%
!!! TACATGTTGTTTTGTGAATT+TGG + chr3.2:54203383-54203402 None:intergenic 25.0%
!!! TGTTTTGTGAATTTGGTTTA+GGG + chr3.2:54203376-54203395 None:intergenic 25.0%
!!! TTGTTTTGTGAATTTGGTTT+AGG + chr3.2:54203377-54203396 None:intergenic 25.0%
!!! TTTGAAGGTGTTTTGTTATT+TGG - chr3.2:54200978-54200997 MS.gene05570:CDS 25.0%
!!! TTTGATAATGCATGTAAATG+CGG - chr3.2:54200867-54200886 MS.gene05570:CDS 25.0%
AAGTGACATACTTTGATATC+AGG + chr3.2:54201440-54201459 None:intergenic 30.0%
AATTCAGAATCAGAACAATG+TGG - chr3.2:54203475-54203494 MS.gene05570:CDS 30.0%
AGAATGCAATAAAGAATCAC+TGG - chr3.2:54202895-54202914 MS.gene05570:intron 30.0%
AGCAATATGGTGTAAGAAAA+TGG - chr3.2:54201342-54201361 MS.gene05570:intron 30.0%
AGGAAAAATGAGAGAAATTG+TGG + chr3.2:54202183-54202202 None:intergenic 30.0%
ATTAATCCAAACGTGGATTT+AGG + chr3.2:54201852-54201871 None:intergenic 30.0%
ATTAGGCCACATAAAACTAT+AGG + chr3.2:54200543-54200562 None:intergenic 30.0%
ATTCACCTTGAATCTAAACA+TGG + chr3.2:54202558-54202577 None:intergenic 30.0%
CAAACACTCAAACAACAATT+AGG + chr3.2:54200796-54200815 None:intergenic 30.0%
CTACTTATGAGAAATATGGA+GGG + chr3.2:54202297-54202316 None:intergenic 30.0%
CTCCATATTTCTCATAAGTA+GGG - chr3.2:54202296-54202315 MS.gene05570:intron 30.0%
GAAAAAGAAGACACTTTCTT+AGG + chr3.2:54200722-54200741 None:intergenic 30.0%
GAAGAATAATCCAAAGAGTA+AGG + chr3.2:54203281-54203300 None:intergenic 30.0%
GAATCTGATTACTGTTAGTT+TGG + chr3.2:54203304-54203323 None:intergenic 30.0%
GGAAAAATGAGAGAAATTGT+GGG + chr3.2:54202182-54202201 None:intergenic 30.0%
TAAGACAATTAATCCAAACG+TGG + chr3.2:54201859-54201878 None:intergenic 30.0%
TATCCTACTTATGAGAAAAG+TGG + chr3.2:54201915-54201934 None:intergenic 30.0%
TCTATATCTTATGAACTTGC+AGG - chr3.2:54201726-54201745 MS.gene05570:intron 30.0%
TCTTGAAGAATTGAAGATTG+TGG + chr3.2:54202987-54203006 None:intergenic 30.0%
TGCCATTGATAGATTCTTAT+GGG - chr3.2:54200430-54200449 MS.gene05570:CDS 30.0%
TTGTTCCATGTTTAGATTCA+AGG - chr3.2:54202550-54202569 MS.gene05570:CDS 30.0%
! TCTTCTTTTTCCTTGATCAA+AGG - chr3.2:54200731-54200750 MS.gene05570:CDS 30.0%
! TGAATTTGGTTTAGGGTAAT+TGG + chr3.2:54203369-54203388 None:intergenic 30.0%
!! TAGCATATGGTTCTAAATTG+CGG - chr3.2:54200820-54200839 MS.gene05570:CDS 30.0%
!! TTGGTGTTACTTTCAAACAA+AGG - chr3.2:54200997-54201016 MS.gene05570:CDS 30.0%
!!! CTTCAACCTATAGTTTTATG+TGG - chr3.2:54200534-54200553 MS.gene05570:CDS 30.0%
AAAATGAGAGAAATTGTGGG+AGG + chr3.2:54202179-54202198 None:intergenic 35.0%
AAACCAATTGGAGTACGTAT+TGG - chr3.2:54200353-54200372 MS.gene05570:CDS 35.0%
AAAGAGTAAGGGTTTGAAGA+GGG + chr3.2:54203269-54203288 None:intergenic 35.0%
AAAGATGGCATAATCATCTG+AGG - chr3.2:54201414-54201433 MS.gene05570:intron 35.0%
AAGGTAATTCATCATAGGTG+TGG + chr3.2:54203420-54203439 None:intergenic 35.0%
AATCCACAATCAGTAACATC+AGG + chr3.2:54203329-54203348 None:intergenic 35.0%
AATCTATCAATGGCAGTCAA+AGG + chr3.2:54200425-54200444 None:intergenic 35.0%
ACAAATTCCTTCATTGTGTG+TGG - chr3.2:54200640-54200659 MS.gene05570:CDS 35.0%
ACCCCATAAGAATCTATCAA+TGG + chr3.2:54200435-54200454 None:intergenic 35.0%
AGAATGTGAGAAAATGTTGG+AGG + chr3.2:54201828-54201847 None:intergenic 35.0%
ATAAATCCTAACTAGGGTTC+AGG + chr3.2:54202203-54202222 None:intergenic 35.0%
ATCACTGGAATGCAACAAAA+AGG - chr3.2:54202910-54202929 MS.gene05570:intron 35.0%
ATCCACAATCAGTAACATCA+GGG + chr3.2:54203328-54203347 None:intergenic 35.0%
ATGACTAAATCACACCAACA+AGG - chr3.2:54202329-54202348 MS.gene05570:intron 35.0%
ATTCTTCCTAAATCCACGTT+TGG - chr3.2:54201843-54201862 MS.gene05570:intron 35.0%
CAAATGAAGAGGTGATGAAT+TGG - chr3.2:54200612-54200631 MS.gene05570:CDS 35.0%
CACCCTACTTATGAGAAATA+TGG + chr3.2:54202301-54202320 None:intergenic 35.0%
CCTACTTATGAGAAATATGG+AGG + chr3.2:54202298-54202317 None:intergenic 35.0%
CCTCCATATTTCTCATAAGT+AGG - chr3.2:54202295-54202314 MS.gene05570:intron 35.0%
CTACTTATGAGAAAAGTGGA+GGG + chr3.2:54201911-54201930 None:intergenic 35.0%
CTGCCATTGATAGATTCTTA+TGG - chr3.2:54200429-54200448 MS.gene05570:CDS 35.0%
GAAACCTTGTCAAGGTTATT+TGG + chr3.2:54201889-54201908 None:intergenic 35.0%
GAAGATGTGATCAATGGTTT+AGG - chr3.2:54200668-54200687 MS.gene05570:CDS 35.0%
GAAGGTAGTGATCAGAATTA+AGG + chr3.2:54203439-54203458 None:intergenic 35.0%
GAGAAAGAAGATGTGATCAA+TGG - chr3.2:54200662-54200681 MS.gene05570:CDS 35.0%
GAGTGTTTGTTTGTAGCATA+TGG - chr3.2:54200807-54200826 MS.gene05570:CDS 35.0%
GCCATTGATAGATTCTTATG+GGG - chr3.2:54200431-54200450 MS.gene05570:CDS 35.0%
GGAAGAATGTGAGAAAATGT+TGG + chr3.2:54201831-54201850 None:intergenic 35.0%
GGAATATGAATTTCTCAGAG+GGG - chr3.2:54203510-54203529 MS.gene05570:CDS 35.0%
GGGAATATGAATTTCTCAGA+GGG - chr3.2:54203509-54203528 MS.gene05570:CDS 35.0%
GTGATCAATGGTTTAGGAAA+GGG - chr3.2:54200674-54200693 MS.gene05570:CDS 35.0%
TCAAAGGAAATTGCTGAAGT+TGG - chr3.2:54201316-54201335 MS.gene05570:intron 35.0%
TGAAAAGTTGTTGCATGAAG+AGG + chr3.2:54203202-54203221 None:intergenic 35.0%
TGAAAGTGATAGCTTCGAAA+TGG - chr3.2:54202507-54202526 MS.gene05570:CDS 35.0%
TGGGAATATGAATTTCTCAG+AGG - chr3.2:54203508-54203527 MS.gene05570:CDS 35.0%
TGTGATCAATGGTTTAGGAA+AGG - chr3.2:54200673-54200692 MS.gene05570:CDS 35.0%
TTGACTTTCCGAAGAAACTT+GGG + chr3.2:54202694-54202713 None:intergenic 35.0%
! AAACCTTGTCAAGGTTAGTT+GGG + chr3.2:54202274-54202293 None:intergenic 35.0%
! ATTTTTCCTGAACCCTAGTT+AGG - chr3.2:54202194-54202213 MS.gene05570:intron 35.0%
! CTTCATGCAACAACTTTTCA+AGG - chr3.2:54203202-54203221 MS.gene05570:CDS 35.0%
! GTTCTAAATTGCAGCTGAAT+CGG + chr3.2:54200893-54200912 None:intergenic 35.0%
! TGGAATTCTCTTTGCTATCT+CGG + chr3.2:54202865-54202884 None:intergenic 35.0%
! TTTAGGGTAATTGGAAGGAT+TGG + chr3.2:54203360-54203379 None:intergenic 35.0%
! TTTGACTTTCCGAAGAAACT+TGG + chr3.2:54202695-54202714 None:intergenic 35.0%
! TTTGGTTTAGGGTAATTGGA+AGG + chr3.2:54203365-54203384 None:intergenic 35.0%
!! AAGGAAGATTGGTTTGAAGA+AGG + chr3.2:54203110-54203129 None:intergenic 35.0%
!! AGGAAGATTGGTTTGAAGAA+GGG + chr3.2:54203109-54203128 None:intergenic 35.0%
!! TAGCTTTGTTGATCAGCTAT+TGG - chr3.2:54200589-54200608 MS.gene05570:CDS 35.0%
!!! GAAGTTTTTTTTGAGGGAAG+TGG + chr3.2:54200466-54200485 None:intergenic 35.0%
AAACCCAACTAACCTTGACA+AGG - chr3.2:54202268-54202287 MS.gene05570:intron 40.0%
AACAATGTGGAGTTGCATCT+TGG - chr3.2:54203488-54203507 MS.gene05570:CDS 40.0%
ACAATGTGGAGTTGCATCTT+GGG - chr3.2:54203489-54203508 MS.gene05570:CDS 40.0%
ACCTTGTCAAGGTTATTTGG+AGG + chr3.2:54201886-54201905 None:intergenic 40.0%
AGATTGTGGTTTACCATCAG+TGG + chr3.2:54202973-54202992 None:intergenic 40.0%
ATCACCAACCACTCTTCTAT+TGG - chr3.2:54200395-54200414 MS.gene05570:CDS 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr3.2:54202885-54202904 None:intergenic 40.0%
CAAAGAGTAAGGGTTTGAAG+AGG + chr3.2:54203270-54203289 None:intergenic 40.0%
CAAATAGCTGAGAAGTTGGA+AGG - chr3.2:54201368-54201387 MS.gene05570:intron 40.0%
CCTACTTATGAGAAAAGTGG+AGG + chr3.2:54201912-54201931 None:intergenic 40.0%
CCTTGTCAAGGTTATTTGGA+GGG + chr3.2:54201885-54201904 None:intergenic 40.0%
CTCTTCAAACCCTTACTCTT+TGG - chr3.2:54203268-54203287 MS.gene05570:CDS 40.0%
GAAACCTTGTCAAGGTTAGT+TGG + chr3.2:54202275-54202294 None:intergenic 40.0%
GAGATAGCAAAGAGAATTCC+AGG - chr3.2:54202864-54202883 MS.gene05570:intron 40.0%
GTAAGTTCGGAGTCATAAAG+TGG + chr3.2:54202758-54202777 None:intergenic 40.0%
GTCTCAAATAGCTGAGAAGT+TGG - chr3.2:54201364-54201383 MS.gene05570:intron 40.0%
GTTGAAACTCATGGCATGAT+TGG - chr3.2:54202828-54202847 MS.gene05570:intron 40.0%
GTTGGAGTGAAGAAGAAGAA+AGG - chr3.2:54202799-54202818 MS.gene05570:intron 40.0%
TCAGCTATTGGCAAATGAAG+AGG - chr3.2:54200601-54200620 MS.gene05570:CDS 40.0%
TCTTTCTCCACACACAATGA+AGG + chr3.2:54200650-54200669 None:intergenic 40.0%
TGAGTATTTGCACACCTTGT+TGG + chr3.2:54202346-54202365 None:intergenic 40.0%
TTCTGAATTCCGTTCAGCAT+TGG + chr3.2:54203464-54203483 None:intergenic 40.0%
TTTCCTTGATCAAAGGACAG+TGG - chr3.2:54200738-54200757 MS.gene05570:CDS 40.0%
! AGGATGCTTGTTGAAACTCA+TGG - chr3.2:54202819-54202838 MS.gene05570:intron 40.0%
! ATGGCATGATTGGTAATCGT+TGG - chr3.2:54202838-54202857 MS.gene05570:intron 40.0%
! CGGTTTTTCCCAAGTTTCTT+CGG - chr3.2:54202683-54202702 MS.gene05570:intron 40.0%
! GAAGAGAGAGATGGATTTGT+TGG - chr3.2:54203532-54203551 MS.gene05570:CDS 40.0%
! TCAACAAAGCTAGCTTCTTG+AGG + chr3.2:54200581-54200600 None:intergenic 40.0%
! TGGCATGATTGGTAATCGTT+GGG - chr3.2:54202839-54202858 MS.gene05570:intron 40.0%
! TTTAGGAAAGGGTGCAAAAG+TGG - chr3.2:54200685-54200704 MS.gene05570:CDS 40.0%
!! AGAGATGGATTTGTTGGAGT+TGG - chr3.2:54203538-54203557 MS.gene05570:CDS 40.0%
!! CCTCCACTTTTCTCATAAGT+AGG - chr3.2:54201909-54201928 MS.gene05570:intron 40.0%
!! CTGAAGTTGGTGAAGCAATA+TGG - chr3.2:54201329-54201348 MS.gene05570:intron 40.0%
!! TGTCAAGGTTAGTTGGGTTT+TGG + chr3.2:54202268-54202287 None:intergenic 40.0%
!!! AAGGTTAGTTGGGTTTTGGA+GGG + chr3.2:54202264-54202283 None:intergenic 40.0%
AAAAGGCCTCAAACCACTGA+TGG - chr3.2:54202957-54202976 MS.gene05570:intron 45.0%
AAGAGCTGGAAAGCAGTGTA+GGG - chr3.2:54201391-54201410 MS.gene05570:intron 45.0%
AAGAGGGTTTCTTGGAGTAG+GGG + chr3.2:54203253-54203272 None:intergenic 45.0%
AAGGAGGACCAATAGAAGAG+TGG + chr3.2:54200406-54200425 None:intergenic 45.0%
AGCAGTAGTAGCAGTAGTAC+CGG + chr3.2:54203045-54203064 None:intergenic 45.0%
AGGACCAATAGAAGAGTGGT+TGG + chr3.2:54200402-54200421 None:intergenic 45.0%
AGGGTTTGAAGAGGGTTTCT+TGG + chr3.2:54203261-54203280 None:intergenic 45.0%
AGTCCACTGTCCTTTGATCA+AGG + chr3.2:54200744-54200763 None:intergenic 45.0%
CCAATTGGAGTACGTATTGG+TGG - chr3.2:54200356-54200375 MS.gene05570:CDS 45.0%
CCACCAATACGTACTCCAAT+TGG + chr3.2:54200359-54200378 None:intergenic 45.0%
CCCTCCAAATAACCTTGACA+AGG - chr3.2:54201882-54201901 MS.gene05570:intron 45.0%
CTATCAATGGCAGTCAAAGG+AGG + chr3.2:54200422-54200441 None:intergenic 45.0%
GAAAGCAGTGTAGGGAAAGA+TGG - chr3.2:54201399-54201418 MS.gene05570:intron 45.0%
GAAGAGGGTTTCTTGGAGTA+GGG + chr3.2:54203254-54203273 None:intergenic 45.0%
GGTTTACCATCAGTGGTTTG+AGG + chr3.2:54202966-54202985 None:intergenic 45.0%
TACCTTCCTCCAATGCTGAA+CGG - chr3.2:54203452-54203471 MS.gene05570:CDS 45.0%
TATGGAGGGAAACCTTGTCA+AGG + chr3.2:54202283-54202302 None:intergenic 45.0%
TGAAGAGGGTTTCTTGGAGT+AGG + chr3.2:54203255-54203274 None:intergenic 45.0%
TTCTTGGAGTAGGGGTTAAC+AGG + chr3.2:54203245-54203264 None:intergenic 45.0%
! ATTGGAGTACGTATTGGTGG+TGG - chr3.2:54200359-54200378 MS.gene05570:CDS 45.0%
! CTCCCTGATGTTACTGATTG+TGG - chr3.2:54203323-54203342 MS.gene05570:CDS 45.0%
! TGAATTCCGTTCAGCATTGG+AGG + chr3.2:54203461-54203480 None:intergenic 45.0%
!! ACCACTCAAAAAGCATCCAC+CGG - chr3.2:54203023-54203042 MS.gene05570:intron 45.0%
!! AGTGGACTGATGAAGAAGAC+AGG - chr3.2:54200756-54200775 MS.gene05570:CDS 45.0%
!! CAAGGTTAGTTGGGTTTTGG+AGG + chr3.2:54202265-54202284 None:intergenic 45.0%
AGTGGAGGGAAACCTTGTCA+AGG + chr3.2:54201897-54201916 None:intergenic 50.0%
GAAGAGCTGGAAAGCAGTGT+AGG - chr3.2:54201390-54201409 MS.gene05570:intron 50.0%
GAGAAGTTGGAAGGAAGAGC+TGG - chr3.2:54201377-54201396 MS.gene05570:intron 50.0%
TCTATCTTTGGCATCTGCGC+AGG - chr3.2:54202000-54202019 MS.gene05570:intron 50.0%
! AGTAGTAGCAGTAGTACCGG+TGG + chr3.2:54203042-54203061 None:intergenic 50.0%
! GGAAAGGGTGCAAAAGTGGT+TGG - chr3.2:54200689-54200708 MS.gene05570:CDS 50.0%
! TTCCGTTCAGCATTGGAGGA+AGG + chr3.2:54203457-54203476 None:intergenic 50.0%
!! ACCGGTGGATGCTTTTTGAG+TGG + chr3.2:54203027-54203046 None:intergenic 50.0%
CTCAGAGGGGAAGAGAGAGA+TGG - chr3.2:54203523-54203542 MS.gene05570:CDS 55.0%
GTCCTCAGAGATCGCTGACA+CGG + chr3.2:54203087-54203106 None:intergenic 55.0%
CTCCGTGTCAGCGATCTCTG+AGG - chr3.2:54203082-54203101 MS.gene05570:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 54200350 54203583 54200350 ID=MS.gene05570
chr3.2 mRNA 54200350 54203583 54200350 ID=MS.gene05570.t1;Parent=MS.gene05570
chr3.2 exon 54203156 54203583 54203156 ID=MS.gene05570.t1.exon1;Parent=MS.gene05570.t1
chr3.2 CDS 54203156 54203583 54203156 ID=cds.MS.gene05570.t1;Parent=MS.gene05570.t1
chr3.2 exon 54202485 54202611 54202485 ID=MS.gene05570.t1.exon2;Parent=MS.gene05570.t1
chr3.2 CDS 54202485 54202611 54202485 ID=cds.MS.gene05570.t1;Parent=MS.gene05570.t1
chr3.2 exon 54200350 54201141 54200350 ID=MS.gene05570.t1.exon3;Parent=MS.gene05570.t1
chr3.2 CDS 54200350 54201141 54200350 ID=cds.MS.gene05570.t1;Parent=MS.gene05570.t1
Gene Sequence

>MS.gene05570

ATGAAACCAATTGGAGTACGTATTGGTGGTGGTGATAATTTAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGATAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAAAAACTTCAACAAAATGTTGATGATCAAAATATTTATAGCTTTGGTTGTTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATAATATGATGCCTCAAGAAGCTAGCTTTGTTGATCAGCTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAGAAAGAAGATGTGATCAATGGTTTAGGAAAGGGTGCAAAAGTGGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGTTTTGTAATCAAACCCTAATTGTTGTTTGAGTGTTTGTTTGTAGCATATGGTTCTAAATTGCGGTCGAAGTCGTGTATACGTTAAAATTTTGATAATGCATGTAAATGCGGCCGATTCAGCTGCAATTTAGAACTATGTTGATGAATGTATGATTGTGTGTGTGTGTGTCTTTTTATGATATTATATACTTGGACTAAATTTGAAGGTGTTTTGTTATTTGGTGTTACTTTCAAACAAAGGAAATTGTTGCACTTGTAGATCTCAATTTAGAACTATGTTTGTGATTTCTTTTTTGTCAATTTTTTTTTTGTGAAAAGATTTGTGAATTTTTTTTAATAATATATATTTGGACTAAGTGTATTTTTAATAATATATATTTGGACTAAATTTTAAGGTCTTGTTATATAAAAAAAATGGTACAATTGCACAATTTAGAACTATCTTTGTGAAAGTAAGTTGTTGTTGTTTGTCTGTCCTTTAATAATATATATTTGGGCTAAATTTTAAGGTGTTTTGTAATTTGTTGTTATATAAAATCAAAGGAAATTGCTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAGTATGTCACTTCTTTAATCCTTCAATTTTTTCAATATATTTTCTCTTTAGAACAATATATTGAAAAAATATATTTTCAATATATTTTTTCAATATATAAAGCAAATGACCTCTCAAAAAAAATATAGAACAATGATTTATATTTGATATATGTTTTAGCTAGCCTTGAAAATTTATCTATGATTTTCATAATAATAGTGCATGAAGATTTAGATGTGATTTTTCTAAGATCTATTTTTGTCATCTGCTCAGTTCGATCAGTTTGTCTTTATTTACTTTCTATATCTTATGAACTTGCAGGCATAATCTTGTCACTTTCCAAATTTATCATTCACATGAATGTTTTGATTTTACTATATTTATTCAGAACTTTGATTCCTCCAACATTTTCTCACATTCTTCCTAAATCCACGTTTGGATTAATTGTCTTATTTCCCTCCAAATAACCTTGACAAGGTTTCCCTCCACTTTTCTCATAAGTAGGATATTTTAGCCTAGAAAATTTAGTTATATTTTGATAATTATTGAGCATCTAATTTGATTTTTCTAGGATCTATCTTTGGCATCTGCGCAGGTTGATCACTTTTTCTATATTTATCTTTTAAACTCTTGGGATGTAAAGTTTCCAAGTCAAAGATTAATACATACAAGGCTTAACGTTTTCACTTTCCAAATTTATCATTGACTTGCATGTTTTGATTTTACTATATTTATTCAGAACTTTGTTTCCTCCCACAATTTCTCTCATTTTTCCTGAACCCTAGTTAGGATTTATTGTCATATTAATACAGAAAACTTTGCTAATTAGAGTTTCCCTCCAAAACCCAACTAACCTTGACAAGGTTTCCCTCCATATTTCTCATAAGTAGGGTGTTATACATATGACTAAATCACACCAACAAGGTGTGCAAATACTCAGTTCTTTCTTTTCTTGTCTTTAAAATTTTTTAATTGTCTTTTGGTAAAGAAATTTAATAATATACTAACAATGTGCATACTAATTTTTTATAGAACTATATACTACTTTTTCAGATGGGATCCTAAAGATAGTTTAAGATATGAAAGTGATAGCTTCGAAATGGTTTTTTTAATTAGTTTCAAGTTGTTCCATGTTTAGATTCAAGGTGAATTTGACAGATGACGTCTCATCATAACATTATACATGCACTTAACATACCCTTTATTTTTACTTATCAATATGGTTTTTTGTTTCGTTAATTTTATTTTTTTTAAAACGGTTTTTCCCAAGTTTCTTCGGAAAGTCAAATGTTTGTAAATGGTTAGACGTTGATGAGATTTGAACTTTACCACTTTATGACTCCGAACTTACTTTATATATTGCAGAAAGATAGTTGGAGTGAAGAAGAAGAAAGGATGCTTGTTGAAACTCATGGCATGATTGGTAATCGTTGGGCCGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCACTGGAATGCAACAAAAAGGAGACAAAATTCAAAGAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCAATTCTTCAAGACTACATCAAAACTTTGACCACTCAAAAAGCATCCACCGGTACTACTGCTACTACTGCTGCTGCTGCTGCTACTAGCTCCGTGTCAGCGATCTCTGAGGACCCTTCTTCAAACCAATCTTCCTTTGTTTTTTCTAACCTATCTCATGAAAATTCATCATCACCACTTATATCTGAATCTTATGATGATGAACTCCTCTTCATGCAACAACTTTTCAAGGTGAATAACAATGTTGAACCTGTTAACCCCTACTCCAAGAAACCCTCTTCAAACCCTTACTCTTTGGATTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTGTGGATTTGTTCATTCCAATCCTTCCAATTACCCTAAACCAAATTCACAAAACAACATGTACTTGAGTACTTCTTCCACACCTATGATGAATTACCTTAATTCTGATCACTACCTTCCTCCAATGCTGAACGGAATTCAGAATCAGAACAATGTGGAGTTGCATCTTGGGAATATGAATTTCTCAGAGGGGAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG
Protein sequence

>MS.gene05570.t1

MKPIGVRIGGGDNLKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNIYSFGCSNASTYSFMWPNNNNMMPQEASFVDQLLANEEVMNWTQQIPSLCVEKEDVINGLGKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGMIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRKNKRPQTTDGKPQSSILQDYIKTLTTQKASTGTTATTAAAAATSSVSAISEDPSSNQSSFVFSNLSHENSSSPLISESYDDELLFMQQLFKVNNNVEPVNPYSKKPSSNPYSLDYSSQTNSNQILPDVTDCGFVHSNPSNYPKPNSQNNMYLSTSSTPMMNYLNSDHYLPPMLNGIQNQNNVELHLGNMNFSEGKREMDLLELVSSAQFY