AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055897

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055897.t1 MTR_1g063870 94.203 207 9 3 1 206 1 205 1.64e-102 295
MS.gene055897.t1 MTR_7g028160 60.577 104 36 2 15 118 20 118 1.38e-36 129
MS.gene055897.t1 MTR_2g006150 60.000 100 29 1 14 113 105 193 3.59e-35 129
MS.gene055897.t1 MTR_2g006150 60.000 100 29 1 14 113 105 193 3.65e-35 129
MS.gene055897.t1 MTR_8g033070 78.378 74 16 0 49 122 79 152 3.93e-35 126
MS.gene055897.t1 MTR_4g108370 73.171 82 19 1 31 112 81 159 5.71e-35 128
MS.gene055897.t1 MTR_5g039600 73.684 76 20 0 49 124 66 141 9.71e-35 127
MS.gene055897.t1 MTR_1g114380 72.500 80 17 2 34 112 20 95 1.76e-34 123
MS.gene055897.t1 MTR_1g038650 68.235 85 21 2 39 121 25 105 4.70e-34 121
MS.gene055897.t1 MTR_1g101810 73.077 78 21 0 45 122 59 136 1.42e-33 122
MS.gene055897.t1 MTR_1g101810 73.077 78 21 0 45 122 89 166 2.93e-33 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055897.t1 AT2G37000 55.556 144 46 4 50 192 43 169 5.12e-40 135
MS.gene055897.t1 AT1G58100 55.932 118 41 1 48 154 58 175 5.84e-36 130
MS.gene055897.t1 AT1G69690 67.816 87 25 2 28 113 31 115 1.14e-35 128
MS.gene055897.t1 AT1G72010 72.973 74 20 0 39 112 52 125 6.65e-35 127
MS.gene055897.t1 AT5G08330 76.316 76 14 1 50 121 31 106 6.95e-35 124
MS.gene055897.t1 AT3G47620 76.000 75 17 1 39 112 105 179 9.21e-35 128
MS.gene055897.t1 AT3G27010 62.626 99 30 3 19 111 42 139 4.45e-34 123
MS.gene055897.t1 AT3G27010 62.626 99 30 3 19 111 42 139 4.45e-34 123
MS.gene055897.t1 AT2G45680 77.027 74 17 0 49 122 74 147 5.32e-34 124
MS.gene055897.t1 AT5G23280 65.556 90 30 1 51 140 40 128 1.35e-33 120
MS.gene055897.t1 AT5G51910 70.370 81 23 1 43 122 49 129 4.05e-32 118
MS.gene055897.t1 AT5G51910 70.370 81 23 1 43 122 49 129 4.05e-32 118
MS.gene055897.t1 AT1G35560 78.462 65 14 0 48 112 53 117 7.65e-32 118
MS.gene055897.t1 AT5G41030 59.302 86 32 1 47 132 65 147 7.75e-31 113
MS.gene055897.t1 AT3G45150 45.455 99 50 2 48 142 15 113 2.74e-22 89.4
MS.gene055897.t1 AT1G58100 88.571 35 4 0 48 82 58 92 2.60e-15 73.9

Find 87 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGGTGTGACGGTCTT+TGG 0.326298 1.3:-46077128 None:intergenic
TGGAAGGTTTGGTTTCTGAT+TGG 0.336354 1.3:-46077021 None:intergenic
CGACTGTTGGTCCCGGCGGT+GGG 0.370781 1.3:+46077389 MS.gene055897:CDS
CCTGTCTCAGCCGGCGGGGA+TGG 0.373484 1.3:+46077465 MS.gene055897:CDS
ACGACTGTTGGTCCCGGCGG+TGG 0.375769 1.3:+46077388 MS.gene055897:CDS
GGAAGGTTTGGTTTCTGATT+GGG 0.382038 1.3:-46077020 None:intergenic
ACTGTTGGTCCCGGCGGTGG+GGG 0.398278 1.3:+46077391 MS.gene055897:CDS
CGGTCCGGCGGGGACAGTTC+CGG 0.401737 1.3:-46077299 None:intergenic
TGTTACGGCGGTGGAAGGTT+TGG 0.414434 1.3:-46077032 None:intergenic
TCGGACGGTGAGTTTGGTGT+TGG 0.415353 1.3:-46077083 None:intergenic
CGGACGGTGAGTTTGGTGTT+GGG 0.422384 1.3:-46077082 None:intergenic
AGGTCTTCGGACGGTGAGTT+TGG 0.426516 1.3:-46077089 None:intergenic
CAGCCGGCGGGGATGGATTA+CGG 0.432604 1.3:+46077472 MS.gene055897:CDS
GGTGGCGACGGTGGTTGTTA+CGG 0.437898 1.3:-46077047 None:intergenic
GACTGTTGGTCCCGGCGGTG+GGG 0.441550 1.3:+46077390 MS.gene055897:CDS
TTTGGTGTTGGGATCGGAAG+AGG 0.447134 1.3:-46077071 None:intergenic
GACCGTCACACCAAGGTTAA+CGG 0.448472 1.3:+46077133 MS.gene055897:CDS
GCATACGGACACGGCGGCCA+CGG 0.450952 1.3:-46077156 None:intergenic
GTTGGGATCGGAAGAGGTGG+TGG 0.463601 1.3:-46077065 None:intergenic
CGGCAGCTCGGCTGTTGCAT+CGG 0.466946 1.3:-46077436 None:intergenic
CCATCCCCGCCGGCTGAGAC+AGG 0.467844 1.3:-46077465 None:intergenic
CCGTCGATCATCGCCGCTAC+AGG 0.469019 1.3:+46077274 MS.gene055897:CDS
ATCGAGAGGTGGAAGGTCTT+CGG 0.469473 1.3:-46077102 None:intergenic
CTTGACCTGTCTCAGCCGGC+GGG 0.470366 1.3:+46077460 MS.gene055897:CDS
TTCTCCGTTTAAGTCTTCCT+CGG 0.470391 1.3:+46077333 MS.gene055897:CDS
CGGAACTGTCCCCGCCGGAC+CGG 0.473172 1.3:+46077300 MS.gene055897:CDS
AACGGAGAAGAGGTGGAAAC+CGG 0.477385 1.3:-46077319 None:intergenic
GAGGTGGAAACCGGTCCGGC+GGG 0.478968 1.3:-46077310 None:intergenic
CGGCGCAGAGTGGCGGCATA+CGG 0.487397 1.3:-46077171 None:intergenic
GGCCGTTAACCTTGGTGTGA+CGG 0.487689 1.3:-46077135 None:intergenic
GACCTAGCTCACGTGTGAGC+TGG 0.488472 1.3:-46077204 None:intergenic
ATCGGAAGAGGTGGTGGCGA+CGG 0.493308 1.3:-46077059 None:intergenic
CACACCAAGGTTAACGGCCG+TGG 0.500084 1.3:+46077139 MS.gene055897:CDS
GGTGAGTTTGGTGTTGGGAT+CGG 0.500790 1.3:-46077077 None:intergenic
CAGCTCGGCTGTTGCATCGG+CGG 0.511331 1.3:-46077433 None:intergenic
CCTGTGACGACTGTTGGTCC+CGG 0.512876 1.3:+46077382 MS.gene055897:CDS
GGTGTTGGGATCGGAAGAGG+TGG 0.520667 1.3:-46077068 None:intergenic
CTGTTGGTCCCGGCGGTGGG+GGG 0.522672 1.3:+46077392 MS.gene055897:CDS
AGAAGAGGTGGAAACCGGTC+CGG 0.523967 1.3:-46077314 None:intergenic
ATCATCGCCGCTACAGGTAC+CGG 0.527492 1.3:+46077280 MS.gene055897:CDS
GTGGTTGTTACGGCGGTGGA+AGG 0.530957 1.3:-46077037 None:intergenic
CTTGGTGTGACGGTCTTTGG+TGG 0.533419 1.3:-46077125 None:intergenic
GCGGCCACGGCCGTTAACCT+TGG 0.533810 1.3:-46077143 None:intergenic
TAAGTCTTCCTCGGTGCCGT+CGG 0.539714 1.3:+46077342 MS.gene055897:CDS
CCGTCTTGACCTGTCTCAGC+CGG 0.539844 1.3:+46077456 MS.gene055897:CDS
AGAGGTGGAAACCGGTCCGG+CGG 0.541236 1.3:-46077311 None:intergenic
GACGGTGGTTGTTACGGCGG+TGG 0.541430 1.3:-46077041 None:intergenic
TTCCAGCTCACACGTGAGCT+AGG 0.544068 1.3:+46077202 MS.gene055897:CDS
GGCACCGAGGAAGACTTAAA+CGG 0.544702 1.3:-46077337 None:intergenic
ATTCTAGCGGCGCAGAGTGG+CGG 0.558629 1.3:-46077178 None:intergenic
CCGGGACCAACAGTCGTCAC+AGG 0.561674 1.3:-46077382 None:intergenic
TCTTGACCTGTCTCAGCCGG+CGG 0.565908 1.3:+46077459 MS.gene055897:CDS
GGAAGAGGTGGTGGCGACGG+TGG 0.571531 1.3:-46077056 None:intergenic
GACAGTTCCGGTACCTGTAG+CGG 0.580616 1.3:-46077287 None:intergenic
CCTGTAGCGGCGATGATCGA+CGG 0.581417 1.3:-46077274 None:intergenic
GTCTTTGGTGGATCGAGAGG+TGG 0.588804 1.3:-46077113 None:intergenic
TGCAAAAGCAGCGACGTGAA+CGG 0.596315 1.3:-46077520 None:intergenic
AGACTTAAACGGAGAAGAGG+TGG 0.603538 1.3:-46077326 None:intergenic
GTGCCGTAATCCATCCCCGC+CGG 0.610684 1.3:-46077475 None:intergenic
GACAGGTCAAGACGGCAGCT+CGG 0.611079 1.3:-46077448 None:intergenic
TACAACAATGTCTTCATCAG+AGG 0.612302 1.3:+46076973 None:intergenic
TGGATTACGGCACGGCGAGT+AGG 0.614506 1.3:+46077485 MS.gene055897:CDS
CGATCGTTTCACCGTCGGAA+CGG 0.615737 1.3:-46077228 None:intergenic
GGAAGACTTAAACGGAGAAG+AGG 0.618830 1.3:-46077329 None:intergenic
GTTCAGCCTGTGACGACTGT+TGG 0.621754 1.3:+46077376 MS.gene055897:CDS
CCGGCTGAGACAGGTCAAGA+CGG 0.630042 1.3:-46077456 None:intergenic
AGAGTGGCGGCATACGGACA+CGG 0.630769 1.3:-46077165 None:intergenic
ATTGGGTTTGAGAGAATGTG+TGG 0.635459 1.3:-46077003 None:intergenic
AGGTGGAAACCGGTCCGGCG+GGG 0.639096 1.3:-46077309 None:intergenic
GGTACCGGAACTGTCCCCGC+CGG 0.641499 1.3:+46077295 MS.gene055897:CDS
TTGGTGGATCGAGAGGTGGA+AGG 0.641652 1.3:-46077109 None:intergenic
GGCGACGGTGGTTGTTACGG+CGG 0.645530 1.3:-46077044 None:intergenic
CCACTCGATCGTTTCACCGT+CGG 0.646740 1.3:-46077233 None:intergenic
GAGCTAGGTCACCGTTCCGA+CGG 0.649168 1.3:+46077217 MS.gene055897:CDS
ACGGTCTTTGGTGGATCGAG+AGG 0.651900 1.3:-46077116 None:intergenic
GGCGGGGATGGATTACGGCA+CGG 0.663996 1.3:+46077477 MS.gene055897:CDS
CACCAAAGACCGTCACACCA+AGG 0.680883 1.3:+46077126 MS.gene055897:CDS
ACAAGAAACCGACGGCACCG+AGG 0.684600 1.3:-46077350 None:intergenic
AGAGGTGGAAGGTCTTCGGA+CGG 0.686301 1.3:-46077098 None:intergenic
TTGACCTGTCTCAGCCGGCG+GGG 0.687922 1.3:+46077461 MS.gene055897:CDS
TGAACATGACAAGAAACCGA+CGG 0.690502 1.3:-46077358 None:intergenic
AAGATTCTAGCGGCGCAGAG+TGG 0.698200 1.3:-46077181 None:intergenic
CCGACGGTGAAACGATCGAG+TGG 0.701087 1.3:+46077233 MS.gene055897:CDS
TGTGAGCTGGAAGATTCTAG+CGG 0.731020 1.3:-46077191 None:intergenic
TTTGCAACCGTCGACCACGG+GGG 0.740183 1.3:+46077537 MS.gene055897:CDS
GTGACGACTGTTGGTCCCGG+CGG 0.740863 1.3:+46077385 MS.gene055897:CDS
GTGGCGGCATACGGACACGG+CGG 0.797562 1.3:-46077162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATTGGGTTTGAGAGAATGTG+TGG - chr1.3:46077006-46077025 None:intergenic 40.0%
TGAACATGACAAGAAACCGA+CGG - chr1.3:46077361-46077380 None:intergenic 40.0%
TTCTCCGTTTAAGTCTTCCT+CGG + chr1.3:46077333-46077352 MS.gene055897:CDS 40.0%
! GGAAGGTTTGGTTTCTGATT+GGG - chr1.3:46077023-46077042 None:intergenic 40.0%
! TGGAAGGTTTGGTTTCTGAT+TGG - chr1.3:46077024-46077043 None:intergenic 40.0%
AGACTTAAACGGAGAAGAGG+TGG - chr1.3:46077329-46077348 None:intergenic 45.0%
GGAAGACTTAAACGGAGAAG+AGG - chr1.3:46077332-46077351 None:intergenic 45.0%
TGTGAGCTGGAAGATTCTAG+CGG - chr1.3:46077194-46077213 None:intergenic 45.0%
AACGGAGAAGAGGTGGAAAC+CGG - chr1.3:46077322-46077341 None:intergenic 50.0%
ATCGAGAGGTGGAAGGTCTT+CGG - chr1.3:46077105-46077124 None:intergenic 50.0%
GACCGTCACACCAAGGTTAA+CGG + chr1.3:46077133-46077152 MS.gene055897:CDS 50.0%
TGCAAAAGCAGCGACGTGAA+CGG - chr1.3:46077523-46077542 None:intergenic 50.0%
! AACCTTGGTGTGACGGTCTT+TGG - chr1.3:46077131-46077150 None:intergenic 50.0%
! GGCACCGAGGAAGACTTAAA+CGG - chr1.3:46077340-46077359 None:intergenic 50.0%
!! GGTGAGTTTGGTGTTGGGAT+CGG - chr1.3:46077080-46077099 None:intergenic 50.0%
!! TTTGGTGTTGGGATCGGAAG+AGG - chr1.3:46077074-46077093 None:intergenic 50.0%
AAGATTCTAGCGGCGCAGAG+TGG - chr1.3:46077184-46077203 None:intergenic 55.0%
AGAAGAGGTGGAAACCGGTC+CGG - chr1.3:46077317-46077336 None:intergenic 55.0%
AGAGGTGGAAGGTCTTCGGA+CGG - chr1.3:46077101-46077120 None:intergenic 55.0%
AGGTCTTCGGACGGTGAGTT+TGG - chr1.3:46077092-46077111 None:intergenic 55.0%
ATCATCGCCGCTACAGGTAC+CGG + chr1.3:46077280-46077299 MS.gene055897:CDS 55.0%
CACCAAAGACCGTCACACCA+AGG + chr1.3:46077126-46077145 MS.gene055897:CDS 55.0%
CCACTCGATCGTTTCACCGT+CGG - chr1.3:46077236-46077255 None:intergenic 55.0%
CGATCGTTTCACCGTCGGAA+CGG - chr1.3:46077231-46077250 None:intergenic 55.0%
GACAGTTCCGGTACCTGTAG+CGG - chr1.3:46077290-46077309 None:intergenic 55.0%
GTTCAGCCTGTGACGACTGT+TGG + chr1.3:46077376-46077395 MS.gene055897:CDS 55.0%
TGTTACGGCGGTGGAAGGTT+TGG - chr1.3:46077035-46077054 None:intergenic 55.0%
TTCCAGCTCACACGTGAGCT+AGG + chr1.3:46077202-46077221 MS.gene055897:CDS 55.0%
! ACGGTCTTTGGTGGATCGAG+AGG - chr1.3:46077119-46077138 None:intergenic 55.0%
! CTTGGTGTGACGGTCTTTGG+TGG - chr1.3:46077128-46077147 None:intergenic 55.0%
! CTTTTGCAACCGTCGACCAC+GGG + chr1.3:46077535-46077554 MS.gene055897:CDS 55.0%
! GCTTTTGCAACCGTCGACCA+CGG + chr1.3:46077534-46077553 MS.gene055897:CDS 55.0%
! GGCCGTTAACCTTGGTGTGA+CGG - chr1.3:46077138-46077157 None:intergenic 55.0%
! GTCTTTGGTGGATCGAGAGG+TGG - chr1.3:46077116-46077135 None:intergenic 55.0%
! TTGGTGGATCGAGAGGTGGA+AGG - chr1.3:46077112-46077131 None:intergenic 55.0%
! TTTTGCAACCGTCGACCACG+GGG + chr1.3:46077536-46077555 MS.gene055897:CDS 55.0%
!! CGGACGGTGAGTTTGGTGTT+GGG - chr1.3:46077085-46077104 None:intergenic 55.0%
!! TAAGTCTTCCTCGGTGCCGT+CGG + chr1.3:46077342-46077361 MS.gene055897:CDS 55.0%
!! TCGGACGGTGAGTTTGGTGT+TGG - chr1.3:46077086-46077105 None:intergenic 55.0%
!! TTGTTGATTCTCCTCCCCCG+TGG - chr1.3:46077554-46077573 None:intergenic 55.0%
ACAAGAAACCGACGGCACCG+AGG - chr1.3:46077353-46077372 None:intergenic 60.0%
AGAGTGGCGGCATACGGACA+CGG - chr1.3:46077168-46077187 None:intergenic 60.0%
ATTCTAGCGGCGCAGAGTGG+CGG - chr1.3:46077181-46077200 None:intergenic 60.0%
CACACCAAGGTTAACGGCCG+TGG + chr1.3:46077139-46077158 MS.gene055897:CDS 60.0%
CCGACGGTGAAACGATCGAG+TGG + chr1.3:46077233-46077252 MS.gene055897:CDS 60.0%
CCGGCTGAGACAGGTCAAGA+CGG - chr1.3:46077459-46077478 None:intergenic 60.0%
CCGTCTTGACCTGTCTCAGC+CGG + chr1.3:46077456-46077475 MS.gene055897:CDS 60.0%
CCTGTAGCGGCGATGATCGA+CGG - chr1.3:46077277-46077296 None:intergenic 60.0%
CCTGTGACGACTGTTGGTCC+CGG + chr1.3:46077382-46077401 MS.gene055897:CDS 60.0%
GACAGGTCAAGACGGCAGCT+CGG - chr1.3:46077451-46077470 None:intergenic 60.0%
GACCTAGCTCACGTGTGAGC+TGG - chr1.3:46077207-46077226 None:intergenic 60.0%
GAGCTAGGTCACCGTTCCGA+CGG + chr1.3:46077217-46077236 MS.gene055897:CDS 60.0%
GGTGGCGACGGTGGTTGTTA+CGG - chr1.3:46077050-46077069 None:intergenic 60.0%
GTGGTTGTTACGGCGGTGGA+AGG - chr1.3:46077040-46077059 None:intergenic 60.0%
GTTGGGATCGGAAGAGGTGG+TGG - chr1.3:46077068-46077087 None:intergenic 60.0%
TCTTGACCTGTCTCAGCCGG+CGG + chr1.3:46077459-46077478 MS.gene055897:CDS 60.0%
TGGATTACGGCACGGCGAGT+AGG + chr1.3:46077485-46077504 MS.gene055897:CDS 60.0%
TTTGCAACCGTCGACCACGG+GGG + chr1.3:46077537-46077556 MS.gene055897:CDS 60.0%
! ATCGGAAGAGGTGGTGGCGA+CGG - chr1.3:46077062-46077081 None:intergenic 60.0%
! CGGTGGGGGGATTTTCGGTA+TGG + chr1.3:46077405-46077424 MS.gene055897:CDS 60.0%
! GGTGTTGGGATCGGAAGAGG+TGG - chr1.3:46077071-46077090 None:intergenic 60.0%
ACCGAAAATCCCCCCACCGC+CGG - chr1.3:46077404-46077423 None:intergenic 65.0%
AGAGGTGGAAACCGGTCCGG+CGG - chr1.3:46077314-46077333 None:intergenic 65.0%
CAGCTCGGCTGTTGCATCGG+CGG - chr1.3:46077436-46077455 None:intergenic 65.0%
CCGGGACCAACAGTCGTCAC+AGG - chr1.3:46077385-46077404 None:intergenic 65.0%
CCGTCGATCATCGCCGCTAC+AGG + chr1.3:46077274-46077293 MS.gene055897:CDS 65.0%
CGGCAGCTCGGCTGTTGCAT+CGG - chr1.3:46077439-46077458 None:intergenic 65.0%
CTTGACCTGTCTCAGCCGGC+GGG + chr1.3:46077460-46077479 MS.gene055897:CDS 65.0%
GACGGTGGTTGTTACGGCGG+TGG - chr1.3:46077044-46077063 None:intergenic 65.0%
GGCGACGGTGGTTGTTACGG+CGG - chr1.3:46077047-46077066 None:intergenic 65.0%
GTGACGACTGTTGGTCCCGG+CGG + chr1.3:46077385-46077404 MS.gene055897:CDS 65.0%
GTGCCGTAATCCATCCCCGC+CGG - chr1.3:46077478-46077497 None:intergenic 65.0%
TTCTCCTCCCCCGTGGTCGA+CGG - chr1.3:46077547-46077566 None:intergenic 65.0%
TTGACCTGTCTCAGCCGGCG+GGG + chr1.3:46077461-46077480 MS.gene055897:CDS 65.0%
!! CAGCCGGCGGGGATGGATTA+CGG + chr1.3:46077472-46077491 MS.gene055897:CDS 65.0%
!! GGCGGGGATGGATTACGGCA+CGG + chr1.3:46077477-46077496 MS.gene055897:CDS 65.0%
ACGACTGTTGGTCCCGGCGG+TGG + chr1.3:46077388-46077407 MS.gene055897:CDS 70.0%
ACTGTTGGTCCCGGCGGTGG+GGG + chr1.3:46077391-46077410 MS.gene055897:CDS 70.0%
AGGTGGAAACCGGTCCGGCG+GGG - chr1.3:46077312-46077331 None:intergenic 70.0%
CCGAAAATCCCCCCACCGCC+GGG - chr1.3:46077403-46077422 None:intergenic 70.0%
CGACTGTTGGTCCCGGCGGT+GGG + chr1.3:46077389-46077408 MS.gene055897:CDS 70.0%
CGGCGCAGAGTGGCGGCATA+CGG - chr1.3:46077174-46077193 None:intergenic 70.0%
GACTGTTGGTCCCGGCGGTG+GGG + chr1.3:46077390-46077409 MS.gene055897:CDS 70.0%
GAGGTGGAAACCGGTCCGGC+GGG - chr1.3:46077313-46077332 None:intergenic 70.0%
GCATACGGACACGGCGGCCA+CGG - chr1.3:46077159-46077178 None:intergenic 70.0%
GCGGCCACGGCCGTTAACCT+TGG - chr1.3:46077146-46077165 None:intergenic 70.0%
GTGGCGGCATACGGACACGG+CGG - chr1.3:46077165-46077184 None:intergenic 70.0%
! CCCGGCGGTGGGGGGATTTT+CGG + chr1.3:46077400-46077419 MS.gene055897:CDS 70.0%
! GGAAGAGGTGGTGGCGACGG+TGG - chr1.3:46077059-46077078 None:intergenic 70.0%
! GGTACCGGAACTGTCCCCGC+CGG + chr1.3:46077295-46077314 MS.gene055897:CDS 70.0%
CCTGTCTCAGCCGGCGGGGA+TGG + chr1.3:46077465-46077484 MS.gene055897:CDS 75.0%
CGGAACTGTCCCCGCCGGAC+CGG + chr1.3:46077300-46077319 MS.gene055897:CDS 75.0%
CGGTCCGGCGGGGACAGTTC+CGG - chr1.3:46077302-46077321 None:intergenic 75.0%
CTGTTGGTCCCGGCGGTGGG+GGG + chr1.3:46077392-46077411 MS.gene055897:CDS 75.0%
GCAACCGTCGACCACGGGGG+AGG + chr1.3:46077540-46077559 MS.gene055897:CDS 75.0%
! CCATCCCCGCCGGCTGAGAC+AGG - chr1.3:46077468-46077487 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 46076980 46077600 46076980 ID=MS.gene055897
chr1.3 mRNA 46076980 46077600 46076980 ID=MS.gene055897.t1;Parent=MS.gene055897
chr1.3 exon 46076980 46077600 46076980 ID=MS.gene055897.t1.exon1;Parent=MS.gene055897.t1
chr1.3 CDS 46076980 46077600 46076980 ID=cds.MS.gene055897.t1;Parent=MS.gene055897.t1
Gene Sequence

>MS.gene055897

ATGTCTTCATCAGAGGTAGTTATCCACACATTCTCTCAAACCCAATCAGAAACCAAACCTTCCACCGCCGTAACAACCACCGTCGCCACCACCTCTTCCGATCCCAACACCAAACTCACCGTCCGAAGACCTTCCACCTCTCGATCCACCAAAGACCGTCACACCAAGGTTAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCACTCTGCGCCGCTAGAATCTTCCAGCTCACACGTGAGCTAGGTCACCGTTCCGACGGTGAAACGATCGAGTGGCTTCTTCGTCATGCTGAGCCGTCGATCATCGCCGCTACAGGTACCGGAACTGTCCCCGCCGGACCGGTTTCCACCTCTTCTCCGTTTAAGTCTTCCTCGGTGCCGTCGGTTTCTTGTCATGTTCAGCCTGTGACGACTGTTGGTCCCGGCGGTGGGGGGATTTTCGGTATGGCTTTGCCGCCGATGCAACAGCCGAGCTGCCGTCTTGACCTGTCTCAGCCGGCGGGGATGGATTACGGCACGGCGAGTAGGTATCGTCATATGCCGTTCACGTCGCTGCTTTTGCAACCGTCGACCACGGGGGAGGAGAATCAACAAGAAGAAGAAGCTCTTAACGAACAATGA
Protein sequence

>MS.gene055897.t1

MSSSEVVIHTFSQTQSETKPSTAVTTTVATTSSDPNTKLTVRRPSTSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAGPVSTSSPFKSSSVPSVSCHVQPVTTVGPGGGGIFGMALPPMQQPSCRLDLSQPAGMDYGTASRYRHMPFTSLLLQPSTTGEENQQEEEALNEQ