AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056049

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056049.t1 MTR_1g083110 82.979 282 5 1 490 728 2 283 3.28e-161 467
MS.gene056049.t1 MTR_2g099990 59.317 322 73 6 49 347 34 320 8.79e-119 365
MS.gene056049.t1 MTR_8g017210 61.238 307 88 6 59 348 60 352 5.76e-115 357
MS.gene056049.t1 MTR_4g059870 42.947 475 207 14 59 503 36 476 4.66e-106 333
MS.gene056049.t1 MTR_1g094115 83.333 162 27 0 59 220 45 206 4.80e-102 323
MS.gene056049.t1 MTR_1g016010 80.702 171 32 1 52 221 32 202 5.67e-102 320
MS.gene056049.t1 MTR_2g099990 58.392 286 61 6 85 347 1 251 3.42e-101 317
MS.gene056049.t1 MTR_1g112270 84.076 157 25 0 64 220 47 203 7.51e-100 319
MS.gene056049.t1 MTR_2g090745 55.799 319 98 6 71 347 17 334 9.52e-100 314
MS.gene056049.t1 MTR_2g093960 68.116 207 60 4 60 260 31 237 5.49e-98 309
MS.gene056049.t1 MTR_1g112270 78.571 168 25 1 64 220 47 214 2.69e-96 310
MS.gene056049.t1 MTR_1g094115 73.457 162 26 1 59 220 45 189 3.09e-86 281
MS.gene056049.t1 MTR_2g017720 79.167 120 20 1 66 185 318 432 5.69e-57 200
MS.gene056049.t1 MTR_3g102000 71.717 99 21 2 88 182 36 131 1.26e-40 149
MS.gene056049.t1 MTR_5g030560 78.000 50 11 0 66 115 11 60 5.57e-21 88.2
MS.gene056049.t1 MTR_1g093095 33.520 179 90 8 72 229 103 273 6.04e-19 88.6
MS.gene056049.t1 MTR_7g023290 31.304 115 73 3 612 726 126 234 4.16e-11 64.3
MS.gene056049.t1 MTR_7g023290 31.304 115 73 3 612 726 129 237 4.34e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056049.t1 AT3G50700 57.100 331 103 6 52 349 20 344 5.22e-113 349
MS.gene056049.t1 AT5G44160 56.698 321 106 7 56 345 31 349 2.99e-111 345
MS.gene056049.t1 AT1G03840 88.304 171 19 1 56 225 35 205 1.17e-109 342
MS.gene056049.t1 AT1G03840 87.135 171 19 2 56 225 35 203 5.05e-106 333
MS.gene056049.t1 AT2G02080 41.719 477 174 14 58 480 51 477 3.10e-103 326
MS.gene056049.t1 AT2G02080 41.719 477 174 14 58 480 51 477 3.10e-103 326
MS.gene056049.t1 AT2G02080 41.719 477 174 14 58 480 51 477 3.10e-103 326
MS.gene056049.t1 AT2G02080 41.719 477 174 14 58 480 51 477 3.10e-103 326
MS.gene056049.t1 AT1G55110 75.130 193 38 2 42 224 35 227 1.38e-102 322
MS.gene056049.t1 AT1G55110 75.130 193 38 2 42 224 35 227 1.38e-102 322
MS.gene056049.t1 AT1G55110 75.130 193 38 2 42 224 35 227 1.38e-102 322
MS.gene056049.t1 AT1G14580 80.838 167 32 0 54 220 46 212 1.92e-102 322
MS.gene056049.t1 AT1G14580 80.838 167 32 0 54 220 46 212 1.92e-102 322
MS.gene056049.t1 AT5G44160 55.410 305 104 6 71 345 8 310 2.48e-102 321
MS.gene056049.t1 AT1G14580 80.838 167 32 0 54 220 60 226 4.10e-102 322
MS.gene056049.t1 AT4G02670 77.473 182 39 2 52 232 47 227 1.04e-101 318
MS.gene056049.t1 AT4G02670 77.473 182 39 2 52 232 45 225 1.22e-101 318
MS.gene056049.t1 AT3G13810 88.199 161 18 1 61 220 51 211 1.41e-101 321
MS.gene056049.t1 AT3G45260 85.093 161 23 1 61 220 39 199 1.89e-101 319
MS.gene056049.t1 AT3G45260 85.093 161 23 1 61 220 39 199 1.89e-101 319
MS.gene056049.t1 AT3G13810 88.199 161 18 1 61 220 70 230 1.90e-101 321
MS.gene056049.t1 AT3G13810 88.199 161 18 1 61 220 70 230 1.90e-101 321
MS.gene056049.t1 AT3G13810 88.199 161 18 1 61 220 65 225 2.17e-101 321
MS.gene056049.t1 AT5G03150 67.742 217 52 3 61 261 53 267 1.23e-98 313
MS.gene056049.t1 AT5G60470 81.098 164 30 1 61 223 40 203 2.53e-98 311
MS.gene056049.t1 AT5G60470 81.098 164 30 1 61 223 44 207 2.85e-98 311
MS.gene056049.t1 AT2G02070 81.875 160 29 0 61 220 52 211 9.19e-98 314
MS.gene056049.t1 AT2G02070 81.875 160 29 0 61 220 52 211 9.19e-98 314
MS.gene056049.t1 AT3G13810 86.928 153 19 1 72 223 68 220 8.30e-94 301
MS.gene056049.t1 AT3G13810 86.928 153 19 1 72 223 82 234 1.22e-93 301
MS.gene056049.t1 AT5G60470 74.566 173 39 2 56 223 26 198 8.08e-92 294
MS.gene056049.t1 AT2G02080 39.778 450 167 14 85 480 1 400 8.25e-88 283
MS.gene056049.t1 AT2G02080 39.778 450 167 14 85 480 1 400 8.25e-88 283
MS.gene056049.t1 AT3G05410 57.724 246 58 2 529 728 35 280 3.46e-87 276
MS.gene056049.t1 AT1G68130 66.026 156 51 2 61 214 41 196 6.68e-71 238
MS.gene056049.t1 AT2G01940 61.538 169 63 2 50 216 33 201 6.48e-70 236
MS.gene056049.t1 AT1G25250 63.694 157 54 2 61 214 33 189 7.66e-69 231
MS.gene056049.t1 AT2G01940 60.588 170 64 3 50 216 33 202 3.90e-66 226
MS.gene056049.t1 AT1G25250 64.626 147 49 2 71 214 20 166 2.49e-65 221
MS.gene056049.t1 AT5G66730 31.381 478 263 11 39 479 8 457 2.49e-49 181
MS.gene056049.t1 AT1G68130 65.455 110 36 2 107 214 1 110 3.12e-45 165
MS.gene056049.t1 AT2G01940 63.393 112 39 2 107 216 1 112 3.94e-44 162
MS.gene056049.t1 AT1G25250 62.162 111 39 2 107 214 1 111 3.79e-43 158
MS.gene056049.t1 AT3G05410 48.252 143 28 2 529 625 35 177 2.53e-29 115
MS.gene056049.t1 AT3G05410 47.020 151 33 3 529 632 35 185 8.23e-29 114
MS.gene056049.t1 AT5G22890 31.667 180 106 5 46 210 174 351 5.45e-23 102
MS.gene056049.t1 AT1G34370 33.544 158 91 3 70 213 14 171 1.16e-22 99.4
MS.gene056049.t1 AT1G34370 33.544 158 91 3 70 213 224 381 1.98e-22 102
MS.gene056049.t1 AT1G34370 33.544 158 91 3 70 213 224 381 1.98e-22 102
MS.gene056049.t1 AT1G13290 34.591 159 84 7 72 218 89 239 1.54e-18 87.4
MS.gene056049.t1 AT3G57670 32.370 173 91 7 72 226 205 369 4.96e-18 87.4
MS.gene056049.t1 AT3G20880 33.125 160 91 5 84 228 250 408 6.49e-18 87.4
MS.gene056049.t1 AT1G51220 33.113 151 85 5 72 213 166 309 1.41e-17 85.1
MS.gene056049.t1 AT1G08290 35.294 153 80 7 72 213 168 312 5.60e-17 83.6
MS.gene056049.t1 AT1G34790 32.667 150 89 5 74 213 129 276 9.35e-16 79.3
MS.gene056049.t1 AT3G55330 31.034 116 74 3 612 727 120 229 2.02e-11 65.1

Find 176 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCTTGTACCACATATTT+TGG 0.125409 1.1:-61498927 None:intergenic
GAATTCCAGCTCGTAGTATT+TGG 0.230692 1.1:-61503118 None:intergenic
TTCGGTGCAGTTGAAGATTT+TGG 0.237456 1.1:-61498679 None:intergenic
TGATATGTTTAATGCTATAT+TGG 0.247245 1.1:+61500873 MS.gene056049:CDS
CCCATTATTAACCCTCAAAT+TGG 0.254900 1.1:+61500373 MS.gene056049:CDS
AACAACATCTTGGAAGAAAA+TGG 0.256543 1.1:+61500568 MS.gene056049:CDS
AATGCAAATGGGATAATAAA+TGG 0.269963 1.1:+61500826 MS.gene056049:CDS
ACCAATTTGAGGGTTAATAA+TGG 0.277668 1.1:-61500374 None:intergenic
ATCCTCCTCCACTGAATTTA+CGG 0.280224 1.1:+61502714 MS.gene056049:CDS
AATTTATATACCCGGTGAAT+TGG 0.290188 1.1:+61502630 MS.gene056049:CDS
ATGTTGTTGTTGAAGGGTTT+TGG 0.296073 1.1:-61500478 None:intergenic
CCAATTTGAGGGTTAATAAT+GGG 0.297467 1.1:-61500373 None:intergenic
AAGCCGCCGCTCAAATTTCT+TGG 0.299166 1.1:-61502323 None:intergenic
GGGTTAATAATGGGGTTTAA+AGG 0.300726 1.1:-61500364 None:intergenic
CGGCGGCTTCTTGTGGGAAT+AGG 0.303411 1.1:+61502337 MS.gene056049:CDS
GTGAAGTTGCAGCAGATAAA+TGG 0.308637 1.1:-61500597 None:intergenic
ACTCCTGGCCAGGCTGATTC+AGG 0.309473 1.1:-61503228 None:intergenic
AATAAATTACCTGGATTTCC+TGG 0.317784 1.1:-61497764 None:intergenic
AATAATAATTTCAATGCAAA+TGG 0.327404 1.1:+61500814 MS.gene056049:CDS
ACCAATGTTCCCTTCACATC+TGG 0.337910 1.1:-61503060 None:intergenic
TTTGTAGCCATTAGTGTTGT+TGG 0.339715 1.1:-61498614 None:intergenic
CTTTCAAGGATTGAAGCATT+TGG 0.370030 1.1:+61502979 MS.gene056049:intron
TCAGCTTCACTTGTAGCCTT+AGG 0.370109 1.1:+61502361 MS.gene056049:CDS
GCTGTAATTCGGACCATAAC+AGG 0.374025 1.1:+61503024 MS.gene056049:CDS
AAGAGAAATGGAACTATCAT+TGG 0.385091 1.1:+61502691 MS.gene056049:CDS
GTGGTCTCCTGCTGAGGAAT+TGG 0.385767 1.1:+61502300 MS.gene056049:CDS
CAAAGCATTAATAGTGTTGT+TGG 0.386850 1.1:+61500943 MS.gene056049:CDS
AATGAACCAGTTGTCGCATT+TGG 0.388347 1.1:+61502752 MS.gene056049:CDS
TACGAGAAGTCTAGAGCAAC+GGG 0.393815 1.1:-61502821 None:intergenic
CTGCGACTGCAAACGAGGTT+TGG 0.395300 1.1:+61502196 MS.gene056049:CDS
GGTGCACATAGTAATTTCTA+TGG 0.395859 1.1:+61501075 MS.gene056049:CDS
AGATCACCAAGTGCTCTTGC+AGG 0.399590 1.1:-61498800 None:intergenic
GTTGTTGGAGGTGGAGGAGG+AGG 0.400532 1.1:+61500958 MS.gene056049:CDS
GGAGGAGGCGTTGGAATGAA+TGG 0.403069 1.1:+61500847 MS.gene056049:CDS
AGCTGCTAAAAGAAGAGAAA+TGG 0.407652 1.1:+61502679 MS.gene056049:CDS
GAGTTGAGAGTCCTTCGTTT+AGG 0.409291 1.1:+61503142 MS.gene056049:CDS
TGCTATATTGGATCAAAGTA+AGG 0.411463 1.1:+61500885 MS.gene056049:CDS
AATAATGTTATGAACATTAG+TGG 0.411466 1.1:+61500997 MS.gene056049:CDS
TATGAACATTAGTGGAAGTA+AGG 0.415131 1.1:+61501005 MS.gene056049:CDS
AATAGTGTTGTTGGAGGTGG+AGG 0.417136 1.1:+61500952 MS.gene056049:CDS
CTGTTGCCCGGATCCTGTTA+TGG 0.421587 1.1:-61503037 None:intergenic
ATTTATATACCCGGTGAATT+GGG 0.421832 1.1:+61502631 MS.gene056049:CDS
ATTTGGAAGCCCTGAGGAGG+TGG 0.425175 1.1:+61502996 MS.gene056049:CDS
CTTCACATCTGGCTGTTGCC+CGG 0.426764 1.1:-61503049 None:intergenic
AATATGCTGTTCAATCTGAT+TGG 0.427517 1.1:+61498894 MS.gene056049:CDS
AGTGAATATGTTGTTGTTGA+AGG 0.428537 1.1:-61500485 None:intergenic
AGTGTTGTTGGAGGTGGAGG+AGG 0.433876 1.1:+61500955 MS.gene056049:CDS
AGAGCACTTGGTGATCTTAC+TGG 0.434819 1.1:+61498806 MS.gene056049:CDS
TTCTTGGCCAATTCCTCAGC+AGG 0.436558 1.1:-61502307 None:intergenic
TTTGAGCGGCGGCTTCTTGT+GGG 0.438842 1.1:+61502331 MS.gene056049:CDS
ATGATGGCGCCGCCGCAGTT+TGG 0.444697 1.1:+61500727 MS.gene056049:CDS
ATTCGGACCATAACAGGATC+CGG 0.445861 1.1:+61503030 MS.gene056049:CDS
CAAGTGCTCTTGCAGGGTTA+TGG 0.453384 1.1:-61498793 None:intergenic
TGGTGAACACATGAAGGTTC+AGG 0.454246 1.1:-61498773 None:intergenic
AACCACCTCTTAAGAAGAAA+AGG 0.456615 1.1:+61497735 MS.gene056049:CDS
CAACAAACTGATCAAATACT+TGG 0.458193 1.1:+61497638 MS.gene056049:CDS
TAGAAATCCGACTTCACTCC+TGG 0.458999 1.1:-61503243 None:intergenic
AGTTCATGAGGTGATGATAA+TGG 0.461625 1.1:-61500439 None:intergenic
GAGGAAACGAGATTTGAGAT+TGG 0.462517 1.1:-61500337 None:intergenic
ACTATCACCAACAACACTAA+TGG 0.464691 1.1:+61498607 MS.gene056049:CDS
AAGGCAAGTTGTGTCCTCTT+CGG 0.471989 1.1:-61498697 None:intergenic
GCACCTGAATCAGCCTGGCC+AGG 0.474305 1.1:+61503225 MS.gene056049:CDS
TGTAATGACACTGGATTTGT+TGG 0.477727 1.1:+61501038 MS.gene056049:CDS
ATAATAAATGGAGGAGGCGT+TGG 0.478927 1.1:+61500838 MS.gene056049:CDS
ATTTGAGCGGCGGCTTCTTG+TGG 0.483866 1.1:+61502330 MS.gene056049:CDS
AAACGAGATTTGAGATTGGT+TGG 0.484142 1.1:-61500333 None:intergenic
AGTTGTCGCATTTGGTCCCC+CGG 0.484347 1.1:+61502760 MS.gene056049:CDS
ATCCGACTTCACTCCTGGCC+AGG 0.484525 1.1:-61503238 None:intergenic
GATTTGTTGGGGATAGGAGG+AGG 0.488522 1.1:+61501051 MS.gene056049:CDS
TAATTCACTCAACAACATCT+TGG 0.492063 1.1:+61500558 MS.gene056049:CDS
AGGAACCTACCAGGAAATCC+AGG 0.493855 1.1:+61497755 MS.gene056049:CDS
CTGGATTTGTTGGGGATAGG+AGG 0.495376 1.1:+61501048 MS.gene056049:CDS
TCACACATACCTGGAAAAGA+TGG 0.496844 1.1:-61498969 None:intergenic
GATACAGTTCCACCAATTTG+AGG 0.499903 1.1:-61500385 None:intergenic
CATAACCCTGCAAGAGCACT+TGG 0.500225 1.1:+61498794 MS.gene056049:CDS
ATACAGTTCCACCAATTTGA+GGG 0.501003 1.1:-61500384 None:intergenic
ATTATTAACCCTCAAATTGG+TGG 0.502270 1.1:+61500376 MS.gene056049:CDS
TGGAAGCCCTGAGGAGGTGG+GGG 0.506103 1.1:+61502999 MS.gene056049:CDS
AGTGCTATCACTTCAGCACT+TGG 0.507626 1.1:-61498587 None:intergenic
GTGTCTGTTGTGCTCGTGGT+GGG 0.510607 1.1:+61503178 MS.gene056049:CDS
ATATACCCGGTGAATTGGGT+TGG 0.512379 1.1:+61502635 MS.gene056049:CDS
GCTACAGAAAGCTGCTCAGA+TGG 0.512425 1.1:+61500642 MS.gene056049:CDS
ATTAATAGTGTTGTTGGAGG+TGG 0.514406 1.1:+61500949 MS.gene056049:CDS
CGCCATCATGTTTGTAGCAA+CGG 0.514892 1.1:-61500713 None:intergenic
TTTGAACTGAGTTGAAGAGA+AGG 0.515296 1.1:-61500535 None:intergenic
AACATCACAAGTTGTGATAG+TGG 0.515608 1.1:+61497572 MS.gene056049:CDS
GTTGTTGCTGTTGCATGTAG+TGG 0.516364 1.1:-61500783 None:intergenic
GTAATGACACTGGATTTGTT+GGG 0.517404 1.1:+61501039 MS.gene056049:CDS
GAGATGAAGTTGATGATGAA+AGG 0.518078 1.1:-61500513 None:intergenic
GTGAATATGTTGTTGTTGAA+GGG 0.519299 1.1:-61500484 None:intergenic
AATTACCTGGATTTCCTGGT+AGG 0.520896 1.1:-61497760 None:intergenic
ATTCCAAAATATGTGGTACA+AGG 0.520937 1.1:+61498924 MS.gene056049:CDS
ACTGACATTGAGTTCACCAT+TGG 0.522774 1.1:-61502786 None:intergenic
GAAGAGGACACAACTTGCCT+TGG 0.527889 1.1:+61498699 MS.gene056049:CDS
GCTCTTCACGTTAAATGCTC+AGG 0.527986 1.1:+61503203 MS.gene056049:CDS
ATAATAATTTCAATGCAAAT+GGG 0.528123 1.1:+61500815 MS.gene056049:CDS
TTGAGTTCACCATTGGAACC+CGG 0.530602 1.1:-61502779 None:intergenic
TGCAAACGAGGTTTGGAGCA+TGG 0.534099 1.1:+61502203 MS.gene056049:CDS
AACATTAGTGGAAGTAAGGG+TGG 0.535289 1.1:+61501009 MS.gene056049:CDS
CACATAGTAATTTCTATGGA+GGG 0.535940 1.1:+61501079 MS.gene056049:CDS
TTTGTTGAAGTATGAGAATG+TGG 0.537355 1.1:-61497674 None:intergenic
ACTGTGAGTAATAATAATGC+AGG 0.538175 1.1:+61500670 MS.gene056049:CDS
TTTGGAAGCCCTGAGGAGGT+GGG 0.538503 1.1:+61502997 MS.gene056049:CDS
CGGGCAACAGCCAGATGTGA+AGG 0.539247 1.1:+61503050 MS.gene056049:CDS
TGATCTCCAACCCAATTCAC+CGG 0.539335 1.1:-61502641 None:intergenic
GGCCGTAAATTCAGTGGAGG+AGG 0.539999 1.1:-61502716 None:intergenic
CTCAGGCACCTGAATCAGCC+TGG 0.542478 1.1:+61503220 MS.gene056049:CDS
CAATTTGAGGGTTAATAATG+GGG 0.543880 1.1:-61500372 None:intergenic
AAATGCCAAATACTACGAGC+TGG 0.544263 1.1:+61503113 MS.gene056049:CDS
CTAGTGCAGAAATTAGAAAG+AGG 0.551088 1.1:+61498738 MS.gene056049:CDS
AATGGGGTTTAAAGGTAATG+AGG 0.552566 1.1:-61500356 None:intergenic
TTGGAAGCCCTGAGGAGGTG+GGG 0.553254 1.1:+61502998 MS.gene056049:CDS
ATTAGTGGAAGTAAGGGTGG+TGG 0.553858 1.1:+61501012 MS.gene056049:CDS
TGAGTTCACCATTGGAACCC+GGG 0.558641 1.1:-61502778 None:intergenic
GGTAAAATCAAGTTTGAGAG+AGG 0.559113 1.1:+61503080 MS.gene056049:CDS
AGCATTAATAGTGTTGTTGG+AGG 0.564315 1.1:+61500946 MS.gene056049:CDS
ATGGAAGTTTGTGATCTGAA+TGG 0.564694 1.1:-61500420 None:intergenic
GCACATAGTAATTTCTATGG+AGG 0.570101 1.1:+61501078 MS.gene056049:CDS
TTCGGACCATAACAGGATCC+GGG 0.570845 1.1:+61503031 MS.gene056049:CDS
TTGTTGGGGATAGGAGGAGG+AGG 0.571045 1.1:+61501054 MS.gene056049:CDS
TGCGTCACAGAATGCTCTGT+GGG 0.571848 1.1:-61500257 None:intergenic
AAAGCTCATTCCAAAATATG+TGG 0.572953 1.1:+61498917 MS.gene056049:CDS
ACACTGGATTTGTTGGGGAT+AGG 0.573986 1.1:+61501045 MS.gene056049:CDS
TAGTGCAGAAATTAGAAAGA+GGG 0.575321 1.1:+61498739 MS.gene056049:CDS
TACCGTTGCTACAAACATGA+TGG 0.575806 1.1:+61500711 MS.gene056049:CDS
CATAGTAATTTCTATGGAGG+GGG 0.576896 1.1:+61501081 MS.gene056049:CDS
GTTTGTGTCTGTTGTGCTCG+TGG 0.581200 1.1:+61503174 MS.gene056049:CDS
CTACAGAAAGCTGCTCAGAT+GGG 0.581201 1.1:+61500643 MS.gene056049:CDS
GCCAGATGTGAAGGGAACAT+TGG 0.583930 1.1:+61503059 MS.gene056049:CDS
CGTATGTGAAATATGCAACA+AGG 0.589045 1.1:+61498643 MS.gene056049:CDS
ATGAACATTAGTGGAAGTAA+GGG 0.589532 1.1:+61501006 MS.gene056049:CDS
ACATAGTAATTTCTATGGAG+GGG 0.591190 1.1:+61501080 MS.gene056049:CDS
TGCAACTGCGACTGCAAACG+AGG 0.592179 1.1:+61502191 MS.gene056049:CDS
GATCACCAAGTGCTCTTGCA+GGG 0.594376 1.1:-61498799 None:intergenic
ACATCACAAGTTGTGATAGT+GGG 0.595444 1.1:+61497573 MS.gene056049:CDS
GGGTTATGGTGAACACATGA+AGG 0.595455 1.1:-61498779 None:intergenic
AAGAAGAAAAGGAACCTACC+AGG 0.596110 1.1:+61497746 MS.gene056049:CDS
TCTGTTGTGCTCGTGGTGGG+AGG 0.599561 1.1:+61503181 MS.gene056049:CDS
TGTGTCTGTTGTGCTCGTGG+TGG 0.600729 1.1:+61503177 MS.gene056049:CDS
AGCCTGGCCAGGAGTGAAGT+CGG 0.608593 1.1:+61503236 MS.gene056049:CDS
AGCTTTCTGTAGCAATGCAG+TGG 0.610000 1.1:-61500632 None:intergenic
AGTAGTGTGGTCTCCTGCTG+AGG 0.611268 1.1:+61502294 MS.gene056049:CDS
TTCCAAAATATGTGGTACAA+GGG 0.611826 1.1:+61498925 MS.gene056049:CDS
TTACGAGAAGTCTAGAGCAA+CGG 0.612215 1.1:-61502822 None:intergenic
AATCTTCAACTGCACCGAAG+AGG 0.621618 1.1:+61498683 MS.gene056049:CDS
GAACGTGGCCGTAAATTCAG+TGG 0.623294 1.1:-61502722 None:intergenic
TGGCCAAGAAATTTGAGCGG+CGG 0.623675 1.1:+61502320 MS.gene056049:CDS
GGGCAACAGCCAGATGTGAA+GGG 0.633887 1.1:+61503051 MS.gene056049:CDS
AGCATTTGGAAGCCCTGAGG+AGG 0.637156 1.1:+61502993 MS.gene056049:CDS
TAATGACACTGGATTTGTTG+GGG 0.637157 1.1:+61501040 MS.gene056049:CDS
GTATGTGAAATATGCAACAA+GGG 0.639897 1.1:+61498644 MS.gene056049:CDS
GATCTCCAACCCAATTCACC+GGG 0.641687 1.1:-61502640 None:intergenic
AATGGGATAATAAATGGAGG+AGG 0.644754 1.1:+61500832 MS.gene056049:CDS
ATAATCAGAATTTATATACC+CGG 0.645742 1.1:+61502622 MS.gene056049:intron
TGGTGGAGATGTAATGACAC+TGG 0.649106 1.1:+61501029 MS.gene056049:CDS
TGCACTACACCAAACTGCGG+CGG 0.655717 1.1:-61500736 None:intergenic
GCAAATGGGATAATAAATGG+AGG 0.656300 1.1:+61500829 MS.gene056049:CDS
AATTGGCCAAGAAATTTGAG+CGG 0.658157 1.1:+61502317 MS.gene056049:CDS
GAGTTCACCATTGGAACCCG+GGG 0.659149 1.1:-61502777 None:intergenic
TAATAATGCAGGTATCATGA+CGG 0.660595 1.1:+61500681 MS.gene056049:CDS
GCATGGAACAGAAATTGCAT+TGG 0.662149 1.1:+61502220 MS.gene056049:CDS
CGAGAAGTCTAGAGCAACGG+GGG 0.663936 1.1:-61502819 None:intergenic
CGTGGCCGTAAATTCAGTGG+AGG 0.664103 1.1:-61502719 None:intergenic
AGGGAATACAAATGTGACTG+TGG 0.667636 1.1:+61498944 MS.gene056049:CDS
ATGCGTCACAGAATGCTCTG+TGG 0.669753 1.1:-61500258 None:intergenic
TTTGGTGTAGTGCAACAACA+AGG 0.680990 1.1:+61500745 MS.gene056049:CDS
AAGTTAAAGAAGCAGTAGTG+TGG 0.682044 1.1:+61502281 MS.gene056049:CDS
ACATTGTGTCGCCTAAACGA+AGG 0.685153 1.1:-61503153 None:intergenic
TGAAGCATTTGGAAGCCCTG+AGG 0.694186 1.1:+61502990 MS.gene056049:CDS
GAGAACAACAAAGCAAACGA+AGG 0.700937 1.1:+61500289 MS.gene056049:CDS
ACTACTGACATGAGTTCATG+AGG 0.716939 1.1:-61500451 None:intergenic
TGTTGCACTACACCAAACTG+CGG 0.718918 1.1:-61500739 None:intergenic
AATGCAGTGGCTGACATGTG+AGG 0.731584 1.1:-61500619 None:intergenic
GGTTCATTGACATTAGAACG+TGG 0.752339 1.1:-61502737 None:intergenic
AGTTCACCATTGGAACCCGG+GGG 0.756243 1.1:-61502776 None:intergenic
ACGAGAAGTCTAGAGCAACG+GGG 0.790023 1.1:-61502820 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTAATAAATTTATT+TGG + chr1.1:61500015-61500034 MS.gene056049:intron 0.0%
!! AAACATAAATGTAAATTATT+TGG - chr1.1:61499618-61499637 None:intergenic 10.0%
!! AACATAAATGTAAATTATTT+GGG - chr1.1:61499617-61499636 None:intergenic 10.0%
!! AATAATAATAATAATAGCAA+TGG + chr1.1:61497695-61497714 MS.gene056049:CDS 10.0%
!! TAAAATAAATGATGAATTAT+TGG + chr1.1:61498407-61498426 MS.gene056049:intron 10.0%
!!! TTTTATTTTTAAAGATAAGT+TGG + chr1.1:61499497-61499516 MS.gene056049:intron 10.0%
!! AATAATAATTTCAATGCAAA+TGG + chr1.1:61500814-61500833 MS.gene056049:CDS 15.0%
!! ACATTTAATTAACTGTTAAT+TGG + chr1.1:61502575-61502594 MS.gene056049:intron 15.0%
!! ATAATAATTTCAATGCAAAT+GGG + chr1.1:61500815-61500834 MS.gene056049:CDS 15.0%
!! ATATATTATAATTACTCATG+AGG - chr1.1:61500119-61500138 None:intergenic 15.0%
!! ATCAAATCATTGATATTAAT+TGG + chr1.1:61501375-61501394 MS.gene056049:intron 15.0%
!! ATTTAATTAACTGTTAATTG+GGG + chr1.1:61502577-61502596 MS.gene056049:intron 15.0%
!! CAATATGCAAATAAAATTAA+AGG - chr1.1:61497849-61497868 None:intergenic 15.0%
!! CATTTAATTAACTGTTAATT+GGG + chr1.1:61502576-61502595 MS.gene056049:intron 15.0%
!! CTAATTAATATTAAGAGTTT+AGG + chr1.1:61499390-61499409 MS.gene056049:intron 15.0%
!! TAAAAGAAGAAAGATATAAA+AGG - chr1.1:61499289-61499308 None:intergenic 15.0%
!! TAAAGAAAAATACTTACTTA+GGG + chr1.1:61499431-61499450 MS.gene056049:intron 15.0%
!! TAAGAAAATAAATAATGAAG+TGG - chr1.1:61502023-61502042 None:intergenic 15.0%
!! TGTTACATAATTAAAATCAA+GGG - chr1.1:61497887-61497906 None:intergenic 15.0%
!! TTGTTACATAATTAAAATCA+AGG - chr1.1:61497888-61497907 None:intergenic 15.0%
!! TTTAATTAAGACATTTCTAT+AGG + chr1.1:61498254-61498273 MS.gene056049:intron 15.0%
!!! AATAACGTGTTTAATTTTTT+TGG + chr1.1:61498557-61498576 MS.gene056049:intron 15.0%
!!! ACATAATTATTGTTATTCAT+GGG + chr1.1:61497976-61497995 MS.gene056049:intron 15.0%
!!! GCAATTTGTTATTTTTTTTA+AGG - chr1.1:61499797-61499816 None:intergenic 15.0%
!!! TACATAATTATTGTTATTCA+TGG + chr1.1:61497975-61497994 MS.gene056049:intron 15.0%
!!! TACTATTATTAACTATTTCT+TGG - chr1.1:61501249-61501268 None:intergenic 15.0%
!!! TATTTTTTTTTACCTCATAT+TGG - chr1.1:61498204-61498223 None:intergenic 15.0%
!!! TTCTTCATTGTTTTTTTTTA+TGG + chr1.1:61499565-61499584 MS.gene056049:intron 15.0%
!!! TTCTTTAAGAAATTGTATAA+TGG + chr1.1:61499337-61499356 MS.gene056049:intron 15.0%
!!! TTTTTAACTTTTTGTAGTTT+AGG + chr1.1:61499197-61499216 MS.gene056049:intron 15.0%
!! AAAAATGATATCTCACAAAA+AGG + chr1.1:61498178-61498197 MS.gene056049:intron 20.0%
!! AACATTTGAATACACATTTA+TGG - chr1.1:61501464-61501483 None:intergenic 20.0%
!! AATAATGTTATGAACATTAG+TGG + chr1.1:61500997-61501016 MS.gene056049:CDS 20.0%
!! AATGGCAAATCATTAATTAT+AGG + chr1.1:61501486-61501505 MS.gene056049:intron 20.0%
!! ACATTTGAATACACATTTAT+GGG - chr1.1:61501463-61501482 None:intergenic 20.0%
!! AGAATACAAAATAAATTACC+TGG - chr1.1:61497776-61497795 None:intergenic 20.0%
!! AGGTAAAAAAAAATAGACAA+TGG + chr1.1:61498209-61498228 MS.gene056049:intron 20.0%
!! ATAATCAGAATTTATATACC+CGG + chr1.1:61502622-61502641 MS.gene056049:intron 20.0%
!! ATGGCAAATCATTAATTATA+GGG + chr1.1:61501487-61501506 MS.gene056049:intron 20.0%
!! CTTCACTTAAAAGAATAATT+AGG - chr1.1:61498329-61498348 None:intergenic 20.0%
!! GTAAAGAAAAATACTTACTT+AGG + chr1.1:61499430-61499449 MS.gene056049:intron 20.0%
!! TATTCATACATTAAAAAGCA+TGG + chr1.1:61502548-61502567 MS.gene056049:intron 20.0%
!! TGATATGTTTAATGCTATAT+TGG + chr1.1:61500873-61500892 MS.gene056049:CDS 20.0%
!! TGTGTATTCAAATGTTATAA+TGG + chr1.1:61501468-61501487 MS.gene056049:intron 20.0%
!! TTATTGAAAACTTGAAAACA+AGG + chr1.1:61502932-61502951 MS.gene056049:intron 20.0%
!!! AAATTGTAGTTTTCAAAGTT+AGG + chr1.1:61501757-61501776 MS.gene056049:intron 20.0%
!!! AAATTGTAGTTTTCAAAGTT+AGG - chr1.1:61501776-61501757 None:intergenic 20.0%
!!! AACTTTGAAAACTACAATTT+TGG + chr1.1:61501563-61501582 MS.gene056049:intron 20.0%
!!! AACTTTGAAAACTACAATTT+TGG - chr1.1:61501582-61501563 None:intergenic 20.0%
!!! AATTGTAGTTTTCAAAGTTA+GGG + chr1.1:61501758-61501777 MS.gene056049:intron 20.0%
!!! AATTGTAGTTTTCAAAGTTA+GGG - chr1.1:61501777-61501758 None:intergenic 20.0%
!!! ATTCAACTTTTTGAATTAGT+GGG + chr1.1:61501268-61501287 MS.gene056049:intron 20.0%
!!! ATTTTAATTTGTGCATTCAT+TGG - chr1.1:61501908-61501927 None:intergenic 20.0%
!!! TAACGTGTTTTGTTTTTAAA+AGG + chr1.1:61502051-61502070 MS.gene056049:intron 20.0%
!!! TATTCAACTTTTTGAATTAG+TGG + chr1.1:61501267-61501286 MS.gene056049:intron 20.0%
!!! TTTTTGTGAGATATCATTTT+TGG - chr1.1:61498179-61498198 None:intergenic 20.0%
! AAACACAGATGTAAAATGTT+TGG + chr1.1:61499456-61499475 MS.gene056049:intron 25.0%
! AAGACAAAGATCTATATAGT+GGG + chr1.1:61498346-61498365 MS.gene056049:intron 25.0%
! AATGCAAATGGGATAATAAA+TGG + chr1.1:61500826-61500845 MS.gene056049:CDS 25.0%
! ATGTCACAATTATTATATGC+TGG - chr1.1:61502126-61502145 None:intergenic 25.0%
! ATTAATAAGAAACACTAGCT+AGG - chr1.1:61500198-61500217 None:intergenic 25.0%
! ATTTCTTAACACTTGTGAAT+TGG + chr1.1:61502881-61502900 MS.gene056049:intron 25.0%
! GAAAATAAATAATGAAGTGG+TGG - chr1.1:61502020-61502039 None:intergenic 25.0%
! GAAATGTGAATAAAAACTTG+TGG + chr1.1:61498990-61499009 MS.gene056049:intron 25.0%
! GTAACTTATAATTGTACTCA+AGG - chr1.1:61499987-61500006 None:intergenic 25.0%
! GTGTGAAACAAAGAAAAAAT+AGG - chr1.1:61498518-61498537 None:intergenic 25.0%
! TGTTAAGAAATAAAGTGAAG+TGG - chr1.1:61502872-61502891 None:intergenic 25.0%
! TTGTTATAGAATATGATGCT+TGG - chr1.1:61498022-61498041 None:intergenic 25.0%
!! AGTCTTATCCTTTAATTTCA+TGG - chr1.1:61498282-61498301 None:intergenic 25.0%
!! ATATGAATGATGATGATTTG+CGG - chr1.1:61499681-61499700 None:intergenic 25.0%
!! ATTGTAGTTTTCAAAGTTAG+GGG + chr1.1:61501759-61501778 MS.gene056049:intron 25.0%
!! ATTGTAGTTTTCAAAGTTAG+GGG - chr1.1:61501778-61501759 None:intergenic 25.0%
!! TTCAACTTTTTGAATTAGTG+GGG + chr1.1:61501269-61501288 MS.gene056049:intron 25.0%
!! TTTAGAATTAACCAATGAGA+AGG - chr1.1:61498097-61498116 None:intergenic 25.0%
!!! CAACATTTTGAAAAGATAAG+GGG - chr1.1:61501652-61501671 None:intergenic 25.0%
!!! GCAACATTTTGAAAAGATAA+GGG - chr1.1:61501653-61501672 None:intergenic 25.0%
!!! GTTTTGTTTTTAAAAGGAAG+AGG + chr1.1:61502057-61502076 MS.gene056049:intron 25.0%
AAAGCTCATTCCAAAATATG+TGG + chr1.1:61498917-61498936 MS.gene056049:CDS 30.0%
AACAACATCTTGGAAGAAAA+TGG + chr1.1:61500568-61500587 MS.gene056049:CDS 30.0%
AAGAGAAATGGAACTATCAT+TGG + chr1.1:61502691-61502710 MS.gene056049:CDS 30.0%
AAGAGGTAGCAAAAATATAG+AGG + chr1.1:61502074-61502093 MS.gene056049:intron 30.0%
AATAAATTACCTGGATTTCC+TGG - chr1.1:61497767-61497786 None:intergenic 30.0%
AATATGCTGTTCAATCTGAT+TGG + chr1.1:61498894-61498913 MS.gene056049:CDS 30.0%
AATTTATATACCCGGTGAAT+TGG + chr1.1:61502630-61502649 MS.gene056049:CDS 30.0%
ACATAGTAATTTCTATGGAG+GGG + chr1.1:61501080-61501099 MS.gene056049:CDS 30.0%
ACATATTTCCCTTATGTTAG+GGG - chr1.1:61501622-61501641 None:intergenic 30.0%
ACCAATTTGAGGGTTAATAA+TGG - chr1.1:61500377-61500396 None:intergenic 30.0%
ACTGTGAGTAATAATAATGC+AGG + chr1.1:61500670-61500689 MS.gene056049:CDS 30.0%
AGACAAAGATCTATATAGTG+GGG + chr1.1:61498347-61498366 MS.gene056049:intron 30.0%
AGACATATTTCCCTTATGTT+AGG - chr1.1:61501624-61501643 None:intergenic 30.0%
AGCTAAGAATAAGATAGACT+GGG + chr1.1:61499125-61499144 MS.gene056049:intron 30.0%
ATCAATGATTTGATGTGTCA+TGG - chr1.1:61501369-61501388 None:intergenic 30.0%
ATGAACATTAGTGGAAGTAA+GGG + chr1.1:61501006-61501025 MS.gene056049:CDS 30.0%
ATTATTAACCCTCAAATTGG+TGG + chr1.1:61500376-61500395 MS.gene056049:CDS 30.0%
ATTCCAAAATATGTGGTACA+AGG + chr1.1:61498924-61498943 MS.gene056049:CDS 30.0%
ATTTATATACCCGGTGAATT+GGG + chr1.1:61502631-61502650 MS.gene056049:CDS 30.0%
CAACAAACTGATCAAATACT+TGG + chr1.1:61497638-61497657 MS.gene056049:CDS 30.0%
CAACAGTGTACAACAATTAT+TGG - chr1.1:61498482-61498501 None:intergenic 30.0%
CAATTTGAGGGTTAATAATG+GGG - chr1.1:61500375-61500394 None:intergenic 30.0%
CACATAGTAATTTCTATGGA+GGG + chr1.1:61501079-61501098 MS.gene056049:CDS 30.0%
CCAATTTGAGGGTTAATAAT+GGG - chr1.1:61500376-61500395 None:intergenic 30.0%
GAAGACAAAGATCTATATAG+TGG + chr1.1:61498345-61498364 MS.gene056049:intron 30.0%
GACATATTTCCCTTATGTTA+GGG - chr1.1:61501623-61501642 None:intergenic 30.0%
GTATATTATAATACCCATGC+AGG + chr1.1:61500092-61500111 MS.gene056049:intron 30.0%
GTATGTGAAATATGCAACAA+GGG + chr1.1:61498644-61498663 MS.gene056049:CDS 30.0%
TAATAATGCAGGTATCATGA+CGG + chr1.1:61500681-61500700 MS.gene056049:CDS 30.0%
TAATTCACTCAACAACATCT+TGG + chr1.1:61500558-61500577 MS.gene056049:CDS 30.0%
TAGAATATGATGCTTGGAAT+TGG - chr1.1:61498016-61498035 None:intergenic 30.0%
TAGTGCAGAAATTAGAAAGA+GGG + chr1.1:61498739-61498758 MS.gene056049:CDS 30.0%
TATAGGCTCCATGAAATTAA+AGG + chr1.1:61498271-61498290 MS.gene056049:intron 30.0%
TATGAACATTAGTGGAAGTA+AGG + chr1.1:61501005-61501024 MS.gene056049:CDS 30.0%
TGACATAAAGAGTTGAAAGA+TGG + chr1.1:61502165-61502184 MS.gene056049:intron 30.0%
TGCTATATTGGATCAAAGTA+AGG + chr1.1:61500885-61500904 MS.gene056049:CDS 30.0%
TTAAAGGATAAGACTTGATC+TGG + chr1.1:61498287-61498306 MS.gene056049:intron 30.0%
TTATGTGTAGACTCTTATGA+TGG + chr1.1:61501436-61501455 MS.gene056049:intron 30.0%
TTCCAAAATATGTGGTACAA+GGG + chr1.1:61498925-61498944 MS.gene056049:CDS 30.0%
TTTGAAAACACCACTTAGTT+TGG + chr1.1:61501214-61501233 MS.gene056049:intron 30.0%
TTTGTTGAAGTATGAGAATG+TGG - chr1.1:61497677-61497696 None:intergenic 30.0%
! AGTGAATATGTTGTTGTTGA+AGG - chr1.1:61500488-61500507 None:intergenic 30.0%
! CAAAGCATTAATAGTGTTGT+TGG + chr1.1:61500943-61500962 MS.gene056049:CDS 30.0%
! CTTTCAAAAAGTTGCGATTT+TGG + chr1.1:61501534-61501553 MS.gene056049:intron 30.0%
! CTTTCAAAAAGTTGCGATTT+TGG - chr1.1:61501553-61501534 None:intergenic 30.0%
! GTGAATATGTTGTTGTTGAA+GGG - chr1.1:61500487-61500506 None:intergenic 30.0%
! TCAAGTTTTCAATAAGCACA+TGG - chr1.1:61502927-61502946 None:intergenic 30.0%
! TTGTAGTTTTCAAAGTTAGG+GGG + chr1.1:61501760-61501779 MS.gene056049:intron 30.0%
! TTGTAGTTTTCAAAGTTAGG+GGG - chr1.1:61501779-61501760 None:intergenic 30.0%
!! ATCGCAACTTTTTGAAAGAT+AGG - chr1.1:61501807-61501788 None:intergenic 30.0%
!! CGCAACATTTTGAAAAGATA+AGG - chr1.1:61501654-61501673 None:intergenic 30.0%
!! CGCAACTTTTTGAAAGATAA+GGG + chr1.1:61501790-61501809 MS.gene056049:intron 30.0%
!! GAAAAGTGTTCTTAGTTCAT+AGG - chr1.1:61499164-61499183 None:intergenic 30.0%
!! GCAACTTTTTGAAAGATAAG+GGG + chr1.1:61501791-61501810 MS.gene056049:intron 30.0%
!! TCGCAACTTTTTGAAAGATA+AGG + chr1.1:61501789-61501808 MS.gene056049:intron 30.0%
!! TCGCAACTTTTTGAAAGATA+GGG - chr1.1:61501808-61501789 None:intergenic 30.0%
!! TTTTGGAAACGAAGATCATT+TGG - chr1.1:61498162-61498181 None:intergenic 30.0%
!!! TTCAAAATGGCCCTTTTTTT+TGG + chr1.1:61501692-61501711 MS.gene056049:intron 30.0%
AACATCACAAGTTGTGATAG+TGG + chr1.1:61497572-61497591 MS.gene056049:CDS 35.0%
AACCACCTCTTAAGAAGAAA+AGG + chr1.1:61497735-61497754 MS.gene056049:CDS 35.0%
AAGTTAAAGAAGCAGTAGTG+TGG + chr1.1:61502281-61502300 MS.gene056049:CDS 35.0%
AATGGGATAATAAATGGAGG+AGG + chr1.1:61500832-61500851 MS.gene056049:CDS 35.0%
AATGGGGTTTAAAGGTAATG+AGG - chr1.1:61500359-61500378 None:intergenic 35.0%
AATTGGCCAAGAAATTTGAG+CGG + chr1.1:61502317-61502336 MS.gene056049:CDS 35.0%
ACATCACAAGTTGTGATAGT+GGG + chr1.1:61497573-61497592 MS.gene056049:CDS 35.0%
ACTATCACCAACAACACTAA+TGG + chr1.1:61498607-61498626 MS.gene056049:CDS 35.0%
ACTTCTTTCAACCTTCTCAT+TGG + chr1.1:61498083-61498102 MS.gene056049:intron 35.0%
AGAAATTGGTCAACCAAGAA+TGG + chr1.1:61501159-61501178 MS.gene056049:intron 35.0%
AGAGCATATTTCCCTAAACA+TGG - chr1.1:61501593-61501612 None:intergenic 35.0%
AGAGCCACAAAAACTAGATA+AGG + chr1.1:61501968-61501987 MS.gene056049:intron 35.0%
AGATTCAAATCCTCCATTCT+TGG - chr1.1:61501175-61501194 None:intergenic 35.0%
AGCTGCTAAAAGAAGAGAAA+TGG + chr1.1:61502679-61502698 MS.gene056049:CDS 35.0%
AGTTCATGAGGTGATGATAA+TGG - chr1.1:61500442-61500461 None:intergenic 35.0%
ATACAGTTCCACCAATTTGA+GGG - chr1.1:61500387-61500406 None:intergenic 35.0%
ATGGAAGTTTGTGATCTGAA+TGG - chr1.1:61500423-61500442 None:intergenic 35.0%
ATTCACATTTCACACATACC+TGG - chr1.1:61498981-61499000 None:intergenic 35.0%
CAAAGATTCCTACGTATGTA+GGG + chr1.1:61500044-61500063 MS.gene056049:intron 35.0%
CAGCTAAGAATAAGATAGAC+TGG + chr1.1:61499124-61499143 MS.gene056049:intron 35.0%
CATAGTAATTTCTATGGAGG+GGG + chr1.1:61501081-61501100 MS.gene056049:CDS 35.0%
CATATTTCCCTTATGTTAGG+GGG - chr1.1:61501621-61501640 None:intergenic 35.0%
CCCATTATTAACCCTCAAAT+TGG + chr1.1:61500373-61500392 MS.gene056049:CDS 35.0%
CGTATGTGAAATATGCAACA+AGG + chr1.1:61498643-61498662 MS.gene056049:CDS 35.0%
CTAGTGCAGAAATTAGAAAG+AGG + chr1.1:61498738-61498757 MS.gene056049:CDS 35.0%
CTTATTCTTAGCTGCCAAAA+CGG - chr1.1:61499118-61499137 None:intergenic 35.0%
GAGCATATTTCCCTAAACAT+GGG - chr1.1:61501592-61501611 None:intergenic 35.0%
GAGCCACAAAAACTAGATAA+GGG + chr1.1:61501969-61501988 MS.gene056049:intron 35.0%
GCAAATGGGATAATAAATGG+AGG + chr1.1:61500829-61500848 MS.gene056049:CDS 35.0%
GCACATAGTAATTTCTATGG+AGG + chr1.1:61501078-61501097 MS.gene056049:CDS 35.0%
GGTAAAATCAAGTTTGAGAG+AGG + chr1.1:61503080-61503099 MS.gene056049:CDS 35.0%
GGTGCACATAGTAATTTCTA+TGG + chr1.1:61501075-61501094 MS.gene056049:CDS 35.0%
TATAGGGTAAAGTGCAACTT+TGG + chr1.1:61501503-61501522 MS.gene056049:intron 35.0%
TCAAAGATTCCTACGTATGT+AGG + chr1.1:61500043-61500062 MS.gene056049:intron 35.0%
TCTACACATAACACTTACAC+TGG - chr1.1:61501427-61501446 None:intergenic 35.0%
TGTAATGACACTGGATTTGT+TGG + chr1.1:61501038-61501057 MS.gene056049:CDS 35.0%
TTAAGGCTAAAGTGCAACTT+TGG - chr1.1:61501817-61501836 None:intergenic 35.0%
TTAATTGGGGATGATTCTGA+TGG + chr1.1:61502590-61502609 MS.gene056049:intron 35.0%
TTTATACACCCTACATACGT+AGG - chr1.1:61500055-61500074 None:intergenic 35.0%
TTTGTAGCCATTAGTGTTGT+TGG - chr1.1:61498617-61498636 None:intergenic 35.0%
! AAAACACCACTTAGTTTGGT+TGG + chr1.1:61501218-61501237 MS.gene056049:intron 35.0%
! AAACACCACTTAGTTTGGTT+GGG + chr1.1:61501219-61501238 MS.gene056049:intron 35.0%
! AAACGAGATTTGAGATTGGT+TGG - chr1.1:61500336-61500355 None:intergenic 35.0%
! AACTTTGAAAACTGCTGAGA+AGG - chr1.1:61501728-61501747 None:intergenic 35.0%
! AAGCACTTTTGTAGAAAGCA+TGG + chr1.1:61498836-61498855 MS.gene056049:CDS 35.0%
! AGCATTAATAGTGTTGTTGG+AGG + chr1.1:61500946-61500965 MS.gene056049:CDS 35.0%
! AGGTTCCTTTTCTTCTTAAG+AGG - chr1.1:61497743-61497762 None:intergenic 35.0%
! ATTAATAGTGTTGTTGGAGG+TGG + chr1.1:61500949-61500968 MS.gene056049:CDS 35.0%
! CTCAGCAGTTTTCAAAGTTA+GGG + chr1.1:61501729-61501748 MS.gene056049:intron 35.0%
! CTTTCAAGGATTGAAGCATT+TGG + chr1.1:61502979-61502998 MS.gene056049:intron 35.0%
! CTTTTAACCCCCTAACATAA+GGG + chr1.1:61501611-61501630 MS.gene056049:intron 35.0%
! GACCCCTTATCTTTTCAAAA+TGG + chr1.1:61501647-61501666 MS.gene056049:intron 35.0%
! GGAGGGAAGTCTTATAATTA+AGG - chr1.1:61501834-61501853 None:intergenic 35.0%
! GGGTTAATAATGGGGTTTAA+AGG - chr1.1:61500367-61500386 None:intergenic 35.0%
! GTAATGACACTGGATTTGTT+GGG + chr1.1:61501039-61501058 MS.gene056049:CDS 35.0%
! TCAGCAGTTTTCAAAGTTAG+GGG + chr1.1:61501730-61501749 MS.gene056049:intron 35.0%
! TCTCAGCAGTTTTCAAAGTT+AGG + chr1.1:61501728-61501747 MS.gene056049:intron 35.0%
! TCTTTTAACCCCCTAACATA+AGG + chr1.1:61501610-61501629 MS.gene056049:intron 35.0%
! TTCCCTTGTACCACATATTT+TGG - chr1.1:61498930-61498949 None:intergenic 35.0%
! TTCCTTTTCTTCTTAAGAGG+TGG - chr1.1:61497740-61497759 None:intergenic 35.0%
! TTTGAACTGAGTTGAAGAGA+AGG - chr1.1:61500538-61500557 None:intergenic 35.0%
!! AGGGCCATTTTGAAAAGATA+AGG - chr1.1:61501686-61501705 None:intergenic 35.0%
!! ATGTTGTTGTTGAAGGGTTT+TGG - chr1.1:61500481-61500500 None:intergenic 35.0%
!! CGCAACTTTTTGAAAGATAG+GGG - chr1.1:61501530-61501549 None:intergenic 35.0%
!! GAGATGAAGTTGATGATGAA+AGG - chr1.1:61500516-61500535 None:intergenic 35.0%
!! GCAACTTTTTGAAAGATAGG+GGG - chr1.1:61501529-61501548 None:intergenic 35.0%
!! GGCCATTTTGAAAAGATAAG+GGG - chr1.1:61501684-61501703 None:intergenic 35.0%
!! GGGCCATTTTGAAAAGATAA+GGG - chr1.1:61501685-61501704 None:intergenic 35.0%
!! TAATGACACTGGATTTGTTG+GGG + chr1.1:61501040-61501059 MS.gene056049:CDS 35.0%
!!! ATGAAGTGGTGGATTTTGAT+TGG - chr1.1:61502009-61502028 None:intergenic 35.0%
!!! GGCATCACTAGTTTTTTTCT+TGG + chr1.1:61502397-61502416 MS.gene056049:intron 35.0%
!!! GTTCTTTGTTTTAGCTTCCA+AGG - chr1.1:61498719-61498738 None:intergenic 35.0%
!!! TTGCCCTTATCTAGTTTTTG+TGG - chr1.1:61501975-61501994 None:intergenic 35.0%
AAATGCCAAATACTACGAGC+TGG + chr1.1:61503113-61503132 MS.gene056049:CDS 40.0%
AACATTAGTGGAAGTAAGGG+TGG + chr1.1:61501009-61501028 MS.gene056049:CDS 40.0%
AAGAAGAAAAGGAACCTACC+AGG + chr1.1:61497746-61497765 MS.gene056049:CDS 40.0%
AATGAACCAGTTGTCGCATT+TGG + chr1.1:61502752-61502771 MS.gene056049:CDS 40.0%
AATTACCTGGATTTCCTGGT+AGG - chr1.1:61497763-61497782 None:intergenic 40.0%
AATTGGTCAACCAAGAATGG+AGG + chr1.1:61501162-61501181 MS.gene056049:intron 40.0%
ACGTTACATTGACACAAGAG+AGG + chr1.1:61502483-61502502 MS.gene056049:intron 40.0%
ACTACTGACATGAGTTCATG+AGG - chr1.1:61500454-61500473 None:intergenic 40.0%
ACTGACATTGAGTTCACCAT+TGG - chr1.1:61502789-61502808 None:intergenic 40.0%
AGGGAATACAAATGTGACTG+TGG + chr1.1:61498944-61498963 MS.gene056049:CDS 40.0%
ATCCTCCTCCACTGAATTTA+CGG + chr1.1:61502714-61502733 MS.gene056049:CDS 40.0%
CATATTTCCCTAAACATGGG+AGG - chr1.1:61501589-61501608 None:intergenic 40.0%
CGACACGTGTCCAAAAAAAA+GGG - chr1.1:61501705-61501724 None:intergenic 40.0%
CGGTGTAGAGCATATTAAAG+TGG - chr1.1:61499661-61499680 None:intergenic 40.0%
CGTTACATTGACACAAGAGA+GGG + chr1.1:61502484-61502503 MS.gene056049:intron 40.0%
CTAGATGTGCTTTATCCCAT+AGG + chr1.1:61502451-61502470 MS.gene056049:intron 40.0%
CTCACAAAAAGGCCAATATG+AGG + chr1.1:61498189-61498208 MS.gene056049:intron 40.0%
CTGATGAGGTTTGGAGAAAT+TGG + chr1.1:61501145-61501164 MS.gene056049:intron 40.0%
GAAGTGGTAGCTAGTAGTAA+TGG - chr1.1:61502856-61502875 None:intergenic 40.0%
GAATTCCAGCTCGTAGTATT+TGG - chr1.1:61503121-61503140 None:intergenic 40.0%
GAGAACAACAAAGCAAACGA+AGG + chr1.1:61500289-61500308 MS.gene056049:CDS 40.0%
GATACAGTTCCACCAATTTG+AGG - chr1.1:61500388-61500407 None:intergenic 40.0%
GCATGGAACAGAAATTGCAT+TGG + chr1.1:61502220-61502239 MS.gene056049:CDS 40.0%
GGTTCATTGACATTAGAACG+TGG - chr1.1:61502740-61502759 None:intergenic 40.0%
GTGAAGTTGCAGCAGATAAA+TGG - chr1.1:61500600-61500619 None:intergenic 40.0%
GTGTGTGTAAGTAAGTAGCT+AGG + chr1.1:61498429-61498448 MS.gene056049:intron 40.0%
GTTACATTGACACAAGAGAG+GGG + chr1.1:61502485-61502504 MS.gene056049:intron 40.0%
GTTCTTAGTTCATAGGTGTG+TGG - chr1.1:61499157-61499176 None:intergenic 40.0%
TACCGTTGCTACAAACATGA+TGG + chr1.1:61500711-61500730 MS.gene056049:CDS 40.0%
TCACACATACCTGGAAAAGA+TGG - chr1.1:61498972-61498991 None:intergenic 40.0%
TTCAGTTTACGACCATTCTG+TGG - chr1.1:61502430-61502449 None:intergenic 40.0%
TTGTGGCTCTCATTTCCTTT+GGG - chr1.1:61501958-61501977 None:intergenic 40.0%
TTTGATGTGTCATGGTCGAA+AGG - chr1.1:61501361-61501380 None:intergenic 40.0%
TTTGTGGCTCTCATTTCCTT+TGG - chr1.1:61501959-61501978 None:intergenic 40.0%
! AACACCACTTAGTTTGGTTG+GGG + chr1.1:61501220-61501239 MS.gene056049:intron 40.0%
! ATAATAAATGGAGGAGGCGT+TGG + chr1.1:61500838-61500857 MS.gene056049:CDS 40.0%
! CAGCAGTTTTCAAAGTTAGG+GGG + chr1.1:61501731-61501750 MS.gene056049:intron 40.0%
! GAAAGCATGGTGAGAAAAAG+TGG + chr1.1:61498849-61498868 MS.gene056049:CDS 40.0%
! GAGGAAACGAGATTTGAGAT+TGG - chr1.1:61500340-61500359 None:intergenic 40.0%
! TGGTAGCTAGTAGTAATGGA+TGG - chr1.1:61502852-61502871 None:intergenic 40.0%
! TTACGAGAAGTCTAGAGCAA+CGG - chr1.1:61502825-61502844 None:intergenic 40.0%
! TTTGGTGTAGTGCAACAACA+AGG + chr1.1:61500745-61500764 MS.gene056049:CDS 40.0%
!! AATTTTGGCCTCCCATGTTT+AGG + chr1.1:61501578-61501597 MS.gene056049:intron 40.0%
!! ATTTTGGCCTCCCATGTTTA+GGG + chr1.1:61501579-61501598 MS.gene056049:intron 40.0%
!! GTAGCCTTAGGTGCAAATTT+TGG + chr1.1:61502373-61502392 MS.gene056049:intron 40.0%
!! TTCGGTGCAGTTGAAGATTT+TGG - chr1.1:61498682-61498701 None:intergenic 40.0%
!! TTGTTGTTGAAGGGTTTTGG+TGG - chr1.1:61500478-61500497 None:intergenic 40.0%
!!! GCGCGTGTTTTTAACTTTCA+AGG + chr1.1:61502965-61502984 MS.gene056049:intron 40.0%
!!! GTGGTGGATTTTGATTGGTT+TGG - chr1.1:61502004-61502023 None:intergenic 40.0%
AAGGCAAGTTGTGTCCTCTT+CGG - chr1.1:61498700-61498719 None:intergenic 45.0%
AATCTTCAACTGCACCGAAG+AGG + chr1.1:61498683-61498702 MS.gene056049:CDS 45.0%
ACATTGTGTCGCCTAAACGA+AGG - chr1.1:61503156-61503175 None:intergenic 45.0%
ACCAATGTTCCCTTCACATC+TGG - chr1.1:61503063-61503082 None:intergenic 45.0%
AGCTTTCTGTAGCAATGCAG+TGG - chr1.1:61500635-61500654 None:intergenic 45.0%
AGTGCTATCACTTCAGCACT+TGG - chr1.1:61498590-61498609 None:intergenic 45.0%
ATATACCCGGTGAATTGGGT+TGG + chr1.1:61502635-61502654 MS.gene056049:CDS 45.0%
ATGTGTCATGGTCGAAAGGA+AGG - chr1.1:61501357-61501376 None:intergenic 45.0%
ATTACTCATGAGGACCTGCA+TGG - chr1.1:61500109-61500128 None:intergenic 45.0%
ATTAGTGGAAGTAAGGGTGG+TGG + chr1.1:61501012-61501031 MS.gene056049:CDS 45.0%
ATTCGGACCATAACAGGATC+CGG + chr1.1:61503030-61503049 MS.gene056049:CDS 45.0%
ATTGACACAAGAGAGGGGTT+CGG + chr1.1:61502490-61502509 MS.gene056049:intron 45.0%
CGCCATCATGTTTGTAGCAA+CGG - chr1.1:61500716-61500735 None:intergenic 45.0%
CTACAGAAAGCTGCTCAGAT+GGG + chr1.1:61500643-61500662 MS.gene056049:CDS 45.0%
GAGTTGAGAGTCCTTCGTTT+AGG + chr1.1:61503142-61503161 MS.gene056049:CDS 45.0%
GATGTGCTTTATCCCATAGG+AGG + chr1.1:61502454-61502473 MS.gene056049:intron 45.0%
GCCACCAAAATTTGCACCTA+AGG - chr1.1:61502380-61502399 None:intergenic 45.0%
GCGACACGTGTCCAAAAAAA+AGG - chr1.1:61501706-61501725 None:intergenic 45.0%
GCTCTTCACGTTAAATGCTC+AGG + chr1.1:61503203-61503222 MS.gene056049:CDS 45.0%
GCTGTAATTCGGACCATAAC+AGG + chr1.1:61503024-61503043 MS.gene056049:CDS 45.0%
GGGTTATGGTGAACACATGA+AGG - chr1.1:61498782-61498801 None:intergenic 45.0%
TAACGTGTGTAGCCTCCTAT+GGG - chr1.1:61502469-61502488 None:intergenic 45.0%
TAGAAATCCGACTTCACTCC+TGG - chr1.1:61503246-61503265 None:intergenic 45.0%
TCAGCTTCACTTGTAGCCTT+AGG + chr1.1:61502361-61502380 MS.gene056049:CDS 45.0%
TGATCTCCAACCCAATTCAC+CGG - chr1.1:61502644-61502663 None:intergenic 45.0%
TGGTGAACACATGAAGGTTC+AGG - chr1.1:61498776-61498795 None:intergenic 45.0%
TGGTGGAGATGTAATGACAC+TGG + chr1.1:61501029-61501048 MS.gene056049:CDS 45.0%
TGTGTCATGGTCGAAAGGAA+GGG - chr1.1:61501356-61501375 None:intergenic 45.0%
TGTTGCACTACACCAAACTG+CGG - chr1.1:61500742-61500761 None:intergenic 45.0%
TTACTCATGAGGACCTGCAT+GGG - chr1.1:61500108-61500127 None:intergenic 45.0%
TTGAGTTCACCATTGGAACC+CGG - chr1.1:61502782-61502801 None:intergenic 45.0%
! AATAGTGTTGTTGGAGGTGG+AGG + chr1.1:61500952-61500971 MS.gene056049:CDS 45.0%
! ACACCACTTAGTTTGGTTGG+GGG + chr1.1:61501221-61501240 MS.gene056049:intron 45.0%
! ACTGTGGAACCATCTTTTCC+AGG + chr1.1:61498960-61498979 MS.gene056049:CDS 45.0%
! AGAGCACTTGGTGATCTTAC+TGG + chr1.1:61498806-61498825 MS.gene056049:CDS 45.0%
! CTCTTGACTTGAGAACCCAA+AGG + chr1.1:61501940-61501959 MS.gene056049:intron 45.0%
! GCCTTAGGTGCAAATTTTGG+TGG + chr1.1:61502376-61502395 MS.gene056049:intron 45.0%
! GTTGTTGCTGTTGCATGTAG+TGG - chr1.1:61500786-61500805 None:intergenic 45.0%
! TACGAGAAGTCTAGAGCAAC+GGG - chr1.1:61502824-61502843 None:intergenic 45.0%
!! ACACTGGATTTGTTGGGGAT+AGG + chr1.1:61501045-61501064 MS.gene056049:CDS 45.0%
!! CTTGGTTTGTCACCACAGAA+TGG + chr1.1:61502415-61502434 MS.gene056049:intron 45.0%
AAGCCGCCGCTCAAATTTCT+TGG - chr1.1:61502326-61502345 None:intergenic 50.0%
AATGCAGTGGCTGACATGTG+AGG - chr1.1:61500622-61500641 None:intergenic 50.0%
AGATCACCAAGTGCTCTTGC+AGG - chr1.1:61498803-61498822 None:intergenic 50.0%
AGGAACCTACCAGGAAATCC+AGG + chr1.1:61497755-61497774 MS.gene056049:CDS 50.0%
AGGTGGGGGAAGCTGTAATT+CGG + chr1.1:61503013-61503032 MS.gene056049:CDS 50.0%
ATGCGTCACAGAATGCTCTG+TGG - chr1.1:61500261-61500280 None:intergenic 50.0%
CAAGTGCTCTTGCAGGGTTA+TGG - chr1.1:61498796-61498815 None:intergenic 50.0%
GAACGTGGCCGTAAATTCAG+TGG - chr1.1:61502725-61502744 None:intergenic 50.0%
GAAGAGGACACAACTTGCCT+TGG + chr1.1:61498699-61498718 MS.gene056049:CDS 50.0%
GATCACCAAGTGCTCTTGCA+GGG - chr1.1:61498802-61498821 None:intergenic 50.0%
GATCTCCAACCCAATTCACC+GGG - chr1.1:61502643-61502662 None:intergenic 50.0%
GCCAGATGTGAAGGGAACAT+TGG + chr1.1:61503059-61503078 MS.gene056049:CDS 50.0%
GCTACAGAAAGCTGCTCAGA+TGG + chr1.1:61500642-61500661 MS.gene056049:CDS 50.0%
GTAACGTGTGTAGCCTCCTA+TGG - chr1.1:61502470-61502489 None:intergenic 50.0%
GTGTCATGGTCGAAAGGAAG+GGG - chr1.1:61501355-61501374 None:intergenic 50.0%
GTTTGTGTCTGTTGTGCTCG+TGG + chr1.1:61503174-61503193 MS.gene056049:CDS 50.0%
TGAGTTCACCATTGGAACCC+GGG - chr1.1:61502781-61502800 None:intergenic 50.0%
TGCGTCACAGAATGCTCTGT+GGG - chr1.1:61500260-61500279 None:intergenic 50.0%
TGGCCAAGAAATTTGAGCGG+CGG + chr1.1:61502320-61502339 MS.gene056049:CDS 50.0%
TGTCATGGTCGAAAGGAAGG+GGG - chr1.1:61501354-61501373 None:intergenic 50.0%
TTCGGACCATAACAGGATCC+GGG + chr1.1:61503031-61503050 MS.gene056049:CDS 50.0%
TTCTTGGCCAATTCCTCAGC+AGG - chr1.1:61502310-61502329 None:intergenic 50.0%
! ACGAGAAGTCTAGAGCAACG+GGG - chr1.1:61502823-61502842 None:intergenic 50.0%
! AGGGGGTACACAACAACAAC+AGG + chr1.1:61501098-61501117 MS.gene056049:intron 50.0%
! TGAAGCATTTGGAAGCCCTG+AGG + chr1.1:61502990-61503009 MS.gene056049:CDS 50.0%
! TGCAAACGAGGTTTGGAGCA+TGG + chr1.1:61502203-61502222 MS.gene056049:CDS 50.0%
!! CATAACCCTGCAAGAGCACT+TGG + chr1.1:61498794-61498813 MS.gene056049:CDS 50.0%
!! CTGGATTTGTTGGGGATAGG+AGG + chr1.1:61501048-61501067 MS.gene056049:CDS 50.0%
!! GATTTGTTGGGGATAGGAGG+AGG + chr1.1:61501051-61501070 MS.gene056049:CDS 50.0%
!!! AAAGTGTGTGCGTGCCGTTT+TGG + chr1.1:61499101-61499120 MS.gene056049:intron 50.0%
AGCATTTGGAAGCCCTGAGG+AGG + chr1.1:61502993-61503012 MS.gene056049:CDS 55.0%
AGTAGTGTGGTCTCCTGCTG+AGG + chr1.1:61502294-61502313 MS.gene056049:CDS 55.0%
AGTTCACCATTGGAACCCGG+GGG - chr1.1:61502779-61502798 None:intergenic 55.0%
AGTTGTCGCATTTGGTCCCC+CGG + chr1.1:61502760-61502779 MS.gene056049:CDS 55.0%
ATTTGAGCGGCGGCTTCTTG+TGG + chr1.1:61502330-61502349 MS.gene056049:CDS 55.0%
ATTTGGAAGCCCTGAGGAGG+TGG + chr1.1:61502996-61503015 MS.gene056049:CDS 55.0%
CAGCAGCAGCTGATGAGGTT+TGG + chr1.1:61501136-61501155 MS.gene056049:intron 55.0%
CGTGGCCGTAAATTCAGTGG+AGG - chr1.1:61502722-61502741 None:intergenic 55.0%
CTGCGACTGCAAACGAGGTT+TGG + chr1.1:61502196-61502215 MS.gene056049:CDS 55.0%
CTGTTGCCCGGATCCTGTTA+TGG - chr1.1:61503040-61503059 None:intergenic 55.0%
CTTCACATCTGGCTGTTGCC+CGG - chr1.1:61503052-61503071 None:intergenic 55.0%
GAGTTCACCATTGGAACCCG+GGG - chr1.1:61502780-61502799 None:intergenic 55.0%
GCTCCCCCAACCAAACTAAG+TGG - chr1.1:61501227-61501246 None:intergenic 55.0%
GGCCGTAAATTCAGTGGAGG+AGG - chr1.1:61502719-61502738 None:intergenic 55.0%
GGGCAACAGCCAGATGTGAA+GGG + chr1.1:61503051-61503070 MS.gene056049:CDS 55.0%
GTCATGGTCGAAAGGAAGGG+GGG - chr1.1:61501353-61501372 None:intergenic 55.0%
GTGGTCTCCTGCTGAGGAAT+TGG + chr1.1:61502300-61502319 MS.gene056049:CDS 55.0%
GTGTCTGTTGTGCTCGTGGT+GGG + chr1.1:61503178-61503197 MS.gene056049:CDS 55.0%
TGCAACTGCGACTGCAAACG+AGG + chr1.1:61502191-61502210 MS.gene056049:CDS 55.0%
TGCACTACACCAAACTGCGG+CGG - chr1.1:61500739-61500758 None:intergenic 55.0%
TGTGTCTGTTGTGCTCGTGG+TGG + chr1.1:61503177-61503196 MS.gene056049:CDS 55.0%
TTGTTGGGGATAGGAGGAGG+AGG + chr1.1:61501054-61501073 MS.gene056049:CDS 55.0%
TTTGAGCGGCGGCTTCTTGT+GGG + chr1.1:61502331-61502350 MS.gene056049:CDS 55.0%
TTTGGAAGCCCTGAGGAGGT+GGG + chr1.1:61502997-61503016 MS.gene056049:CDS 55.0%
! AGTGTTGTTGGAGGTGGAGG+AGG + chr1.1:61500955-61500974 MS.gene056049:CDS 55.0%
! CGAGAAGTCTAGAGCAACGG+GGG - chr1.1:61502822-61502841 None:intergenic 55.0%
!! GGAGGAGGCGTTGGAATGAA+TGG + chr1.1:61500847-61500866 MS.gene056049:CDS 55.0%
AGCAGCAGCAGCAGCTGATG+AGG + chr1.1:61501131-61501150 MS.gene056049:intron 60.0%
AGCCTGGCCAGGAGTGAAGT+CGG + chr1.1:61503236-61503255 MS.gene056049:CDS 60.0%
ATCCGACTTCACTCCTGGCC+AGG - chr1.1:61503241-61503260 None:intergenic 60.0%
CGGCGGCTTCTTGTGGGAAT+AGG + chr1.1:61502337-61502356 MS.gene056049:CDS 60.0%
CGGGCAACAGCCAGATGTGA+AGG + chr1.1:61503050-61503069 MS.gene056049:CDS 60.0%
CTCAGGCACCTGAATCAGCC+TGG + chr1.1:61503220-61503239 MS.gene056049:CDS 60.0%
GGGGGACCAAATGCGACAAC+TGG - chr1.1:61502761-61502780 None:intergenic 60.0%
GTTGTCGCATTTGGTCCCCC+GGG + chr1.1:61502761-61502780 MS.gene056049:CDS 60.0%
GTTGTTGGAGGTGGAGGAGG+AGG + chr1.1:61500958-61500977 MS.gene056049:CDS 60.0%
TTGGAAGCCCTGAGGAGGTG+GGG + chr1.1:61502998-61503017 MS.gene056049:CDS 60.0%
TTTGGTCCCCCGGGTTCCAA+TGG + chr1.1:61502770-61502789 MS.gene056049:CDS 60.0%
! ACTCCTGGCCAGGCTGATTC+AGG - chr1.1:61503231-61503250 None:intergenic 60.0%
! GTCGAAAGGAAGGGGGGTGT+GGG - chr1.1:61501347-61501366 None:intergenic 60.0%
! TCGAAAGGAAGGGGGGTGTG+GGG - chr1.1:61501346-61501365 None:intergenic 60.0%
! TCTGTTGTGCTCGTGGTGGG+AGG + chr1.1:61503181-61503200 MS.gene056049:CDS 60.0%
ACAGCTTCCCCCACCTCCTC+AGG - chr1.1:61503009-61503028 None:intergenic 65.0%
CAGCTTCCCCCACCTCCTCA+GGG - chr1.1:61503008-61503027 None:intergenic 65.0%
GCACCTGAATCAGCCTGGCC+AGG + chr1.1:61503225-61503244 MS.gene056049:CDS 65.0%
GGTCGAAAGGAAGGGGGGTG+TGG - chr1.1:61501348-61501367 None:intergenic 65.0%
TGGAAGCCCTGAGGAGGTGG+GGG + chr1.1:61502999-61503018 MS.gene056049:CDS 65.0%
! ATGATGGCGCCGCCGCAGTT+TGG + chr1.1:61500727-61500746 MS.gene056049:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 61497566 61503299 61497566 ID=MS.gene056049
chr1.1 mRNA 61497566 61503299 61497566 ID=MS.gene056049.t1;Parent=MS.gene056049
chr1.1 exon 61497566 61497776 61497566 ID=MS.gene056049.t1.exon1;Parent=MS.gene056049.t1
chr1.1 CDS 61497566 61497776 61497566 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
chr1.1 exon 61498585 61498981 61498585 ID=MS.gene056049.t1.exon2;Parent=MS.gene056049.t1
chr1.1 CDS 61498585 61498981 61498585 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
chr1.1 exon 61500240 61501102 61500240 ID=MS.gene056049.t1.exon3;Parent=MS.gene056049.t1
chr1.1 CDS 61500240 61501102 61500240 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
chr1.1 exon 61502191 61502382 61502191 ID=MS.gene056049.t1.exon4;Parent=MS.gene056049.t1
chr1.1 CDS 61502191 61502382 61502191 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
chr1.1 exon 61502630 61502840 61502630 ID=MS.gene056049.t1.exon5;Parent=MS.gene056049.t1
chr1.1 CDS 61502630 61502840 61502630 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
chr1.1 exon 61502987 61503299 61502987 ID=MS.gene056049.t1.exon6;Parent=MS.gene056049.t1
chr1.1 CDS 61502987 61503299 61502987 ID=cds.MS.gene056049.t1;Parent=MS.gene056049.t1
Gene Sequence

>MS.gene056049

ATGTCAAACATCACAAGTTGTGATAGTGGGAGTTTCTCTACAGAGAATACAAGAGAAGATGCAGTTAAACAGCAACAAACTGATCAAATACTTGGTCAATTTCATAGTCCACATTCTCATACTTCAACAAATAATAATAATAATAGCAATGGTTCTAACACAGATTTACAACCACCTCTTAAGAAGAAAAGGAACCTACCAGGAAATCCAGGTAATTTATTTTGTATTCTTAAACAATTATCTCAGTTATTTAAGTTGACTATTTTTCTCTAATTTTTCACCTTTAATTTTATTTGCATATTGATTCTTGTTTTTCTTCCCTTGATTTTAATTATGTAACAAGTTCTGATTATTAGTTTTGCAAGATTTCATTTATTGAAATATGATAATCAAATAAAATTTTGAGCAGTACATAATTATTGTTATTCATGGGCTGCACTGCACATACCAATTCCAAGCATCATATTCTATAACAACAATTATTGTATATATTTCATTTGTATATATAAACATATGTACTTCTTTCAACCTTCTCATTGGTTAATTCTAAAAATGAAAAAATAGTGATGTATAGTTTGCTACTAAAATATGTTCCAAATGATCTTCGTTTCCAAAAATGATATCTCACAAAAAGGCCAATATGAGGTAAAAAAAAATAGACAATGGCAAGCTTAATTAATTAAGTGCATTTAATTAAGACATTTCTATAGGCTCCATGAAATTAAAGGATAAGACTTGATCTGGTAAAAAAAGAAGCATGCCTAATTATTCTTTTAAGTGAAGACAAAGATCTATATAGTGGGGATATGTTTTAATTAAGTCAGAATATAATTGATATAGCTAAAATAAATGATGAATTATTGGTGTGTGTAAGTAAGTAGCTAGGAGAAGAAGAAACTCAATTATTGTCTTGCCAATAATTGTTGTACACTGTTGACTTTTGTTGACTCCTATTTTTTCTTTGTTTCACACAAAGTACATATATAGTTTAAATAACGTGTTTAATTTTTTTGGCACAGATCCAAGTGCTGAAGTGATAGCACTATCACCAACAACACTAATGGCTACAAACAGATTCGTATGTGAAATATGCAACAAGGGTTTTCAAAGAGACCAAAATCTTCAACTGCACCGAAGAGGACACAACTTGCCTTGGAAGCTAAAACAAAGAACTAGTGCAGAAATTAGAAAGAGGGTTTATGTTTGTCCTGAACCTTCATGTGTTCACCATAACCCTGCAAGAGCACTTGGTGATCTTACTGGTATCAAAAAGCACTTTTGTAGAAAGCATGGTGAGAAAAAGTGGAAATGTGATAAGTGTTCTAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCCAAAATATGTGGTACAAGGGAATACAAATGTGACTGTGGAACCATCTTTTCCAGGTATGTGTGAAATGTGAATAAAAACTTGTGGTTTAATTTGACTTTTGAACAGTGTTTCTTTCTTAGTTTCTTGCACTAGTTGAACTTTCATGCACTAGCTGTCGTTTACTAATAATAATAAAGTGTGTGCGTGCCGTTTTGGCAGCTAAGAATAAGATAGACTGGGCTTTGACCACACACCTATGAACTAAGAACACTTTTCATTTGAGTTTTTCTTTTTAACTTTTTGTAGTTTAGGTTTTATGAGTGTGTGATGATATTTAGACATCTATAATTCTCGATCACTCATTCAATATTTTATTTTCCTTTTATATCTTTCTTCTTTTACATCATCAATATCATTCTCTCTATTATTTTCTTTAAGAAATTGTATAATGGATTTGTGTTGTACAAAGATTATTTTTCTATCTAATTAATATTAAGAGTTTAGGTTTGATATGTCGTCATCGTAAAGAAAAATACTTACTTAGGGACAAACACAGATGTAAAATGTTTGGTCACACTCAAACAAATACTTTTATTTTTAAAGATAAGTTGGTTTAGTGATTTTGAATAATGTGACTAATTTATTTATCATCTAATTTTCTTCATTGTTTTTTTTTATGGAAATTTTCTTCATTGTTGTGTGTGTACCCAAATAATTTACATTTATGTTTGTATCTATGTAAGACTTTTTCCACTTTAATATGCTCTACACCGCAAATCATCATCATTCATATGTGTGATTTTAAAAATAATATTGATTGAATAGACAATATATATATAGACATACGCTTAATGTATATATTAATCATCAACAATAACAAATCGATCCTTAAAAAAAATAACAAATTGCGAAGAAATATTAAGATGTCTTAACAAATTTTTGTTAGTAGTTAATTCGTTTTATGAAATGTTAGTAGTTTTTTTTTTTGACAAATTAACTATTTATAACATTTCACTATAAAATAAAAGTGATTAGCATTTGATCATTTATATTAATTATATGCATAAAGAAGTGTTCCTTGAGTACAATTATAAGTTACTAGCTACGTATATATTAATAAATTTATTTGGCTCAGTCAAAGATTCCTACGTATGTAGGGTGTATAAAAAACATTAGTCTTTTTAGTATATTATAATACCCATGCAGGTCCTCATGAGTAATTATAATATATTTCATATTTAGTTGTGTTGTTAGATATATGTTGAATATGAGTTTAACTTACATTCACCTAGCTAGTGTTTCTTATTAATTGATTTATTTACTTATATGCAGAAGAGACAGCTTCATTACCCACAGAGCATTCTGTGACGCATTAGCTGAAGAGAACAACAAAGCAAACGAAGGAGTACTATCAAATTTGCAACACCAACCAATCTCAAATCTCGTTTCCTCATTACCTTTAAACCCCATTATTAACCCTCAAATTGGTGGAACTGTATCAGAATTCAACAACCATTCAGATCACAAACTTCCATTATCATCACCTCATGAACTCATGTCAGTAGTGCCACCAAAACCCTTCAACAACAACATATTCACTAGAAGCCTTTCATCATCAACTTCATCTCCTTCTCTTCAACTCAGTTCAAATAATTCACTCAACAACATCTTGGAAGAAAATGGATCACTCCATTTATCTGCTGCAACTTCACCTCACATGTCAGCCACTGCATTGCTACAGAAAGCTGCTCAGATGGGTGCAACTGTGAGTAATAATAATGCAGGTATCATGACGGATAAAACTACCGTTGCTACAAACATGATGGCGCCGCCGCAGTTTGGTGTAGTGCAACAACAAGGACATGCTTTCATGAACCACTACATGCAACAGCAACAACAACACTACAATAATAATTTCAATGCAAATGGGATAATAAATGGAGGAGGCGTTGGAATGAATGGAGTTGATATGTTTAATGCTATATTGGATCAAAGTAAGGCTTTATCGAAGATCATTGAACAAAACAATCAAACTCAAAGCATTAATAGTGTTGTTGGAGGTGGAGGAGGAGGTGCATCAAGTAATAGTAATAATGTTATGAACATTAGTGGAAGTAAGGGTGGTGGAGATGTAATGACACTGGATTTGTTGGGGATAGGAGGAGGAGGTGCACATAGTAATTTCTATGGAGGGGGTACACAACAACAACAGGCAGAAAGTGCAGCAGCAGCAGCAGCTGATGAGGTTTGGAGAAATTGGTCAACCAAGAATGGAGGATTTGAATCTTTTTCAGCAACAAGCAACATTTGAAAACACCACTTAGTTTGGTTGGGGGAGCCAAGAAATAGTTAATAATAGTATTCAACTTTTTGAATTAGTGGGGTTGCTTTAATATTATTTTCTGTTTTTATTTTTAGTATTATTTATTTGACTACCCCACACCCCCCTTCCTTTCGACCATGACACATCAAATCATTGATATTAATTGGTCGATTTTTCATGACAAACTAGCTAGCCAGTGTAAGTGTTATGTGTAGACTCTTATGATGGTCCCATAAATGTGTATTCAAATGTTATAATGGCAAATCATTAATTATAGGGTAAAGTGCAACTTTGGCCCCCTATCTTTCAAAAAGTTGCGATTTTGGCCCCCTAACTTTGAAAACTACAATTTTGGCCTCCCATGTTTAGGGAAATATGCTCTTTTAACCCCCTAACATAAGGGAAATATGTCTTTTGACCCCTTATCTTTTCAAAATGTTGCGATTATGACCCCTTATCTTTTCAAAATGGCCCTTTTTTTTGGACACGTGTCGCCTTCTCAGCAGTTTTCAAAGTTAGGGGGCCAAAATTGTAGTTTTCAAAGTTAGGGGGCCAAAATCGCAACTTTTTGAAAGATAAGGGGCCAAAGTTGCACTTTAGCCTTAATTATAAGACTTCCCTCCTGTTCAATATTCACGTTCGGATTTTCATCATACACATACGTACATATATTGCCAATGAATGCACAAATTAAAATGTAGTGTAATGTCTCTTGACTTGAGAACCCAAAGGAAATGAGAGCCACAAAAACTAGATAAGGGCAATGCATTCCAAACCAATCAAAATCCACCACTTCATTATTTATTTTCTTATAATCGCATAACGTGTTTTGTTTTTAAAAGGAAGAGGTAGCAAAAATATAGAGGATGTAATACATGTTACGTGAATGAAACCAGCATATAATAATTGTGACATAGTACTATATTGTTATTTATGACATAAAGAGTTGAAAGATGGCAGTGCAACTGCGACTGCAAACGAGGTTTGGAGCATGGAACAGAAATTGCATTGGTGTAACACGATGTTCGAGTGATAGAGAAGAAAAATTGAAAGTTAAAGAAGCAGTAGTGTGGTCTCCTGCTGAGGAATTGGCCAAGAAATTTGAGCGGCGGCTTCTTGTGGGAATAGGTTCAGCTTCACTTGTAGCCTTAGGTGCAAATTTTGGTGGCATCACTAGTTTTTTTCTTGGTTTGTCACCACAGAATGGTCGTAAACTGAAGCTAGATGTGCTTTATCCCATAGGAGGCTACACACGTTACATTGACACAAGAGAGGGGTTCGGTAATTTATTTATTTATTCACTTTAGTAGTATATTATATTCATACATTAAAAAGCATGGTAGTACATTTAATTAACTGTTAATTGGGGATGATTCTGATGGTATATTAAAATAATCAGAATTTATATACCCGGTGAATTGGGTTGGAGATCAGACACTGCTGTATCGAGCTGCTAAAAGAAGAGAAATGGAACTATCATTGGATCCTCCTCCACTGAATTTACGGCCACGTTCTAATGTCAATGAACCAGTTGTCGCATTTGGTCCCCCGGGTTCCAATGGTGAACTCAATGTCAGTGTTATTGTTTCCCCCGTTGCTCTAGACTTCTCGTAAGTATCCATCCATTACTACTAGCTACCACTTCACTTTATTTCTTAACACTTGTGAATTGGAATATAATTTCACTTATTTTCCATGTGCTTATTGAAAACTTGAAAACAAGGATTACTGAAAGCGCGTGTTTTTAACTTTCAAGGATTGAAGCATTTGGAAGCCCTGAGGAGGTGGGGGAAGCTGTAATTCGGACCATAACAGGATCCGGGCAACAGCCAGATGTGAAGGGAACATTGGTAAAATCAAGTTTGAGAGAGGATACTGTTAGAAATGCCAAATACTACGAGCTGGAATTCAGAGTTGAGAGTCCTTCGTTTAGGCGACACAATGTTTGTGTCTGTTGTGCTCGTGGTGGGAGGCTCTTCACGTTAAATGCTCAGGCACCTGAATCAGCCTGGCCAGGAGTGAAGTCGGATTTCTATACAATTGCAGATTCATTCAATCTCACAACTTAG
Protein sequence

>MS.gene056049.t1

MSNITSCDSGSFSTENTREDAVKQQQTDQILGQFHSPHSHTSTNNNNNSNGSNTDLQPPLKKKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANEGVLSNLQHQPISNLVSSLPLNPIINPQIGGTVSEFNNHSDHKLPLSSPHELMSVVPPKPFNNNIFTRSLSSSTSSPSLQLSSNNSLNNILEENGSLHLSAATSPHMSATALLQKAAQMGATVSNNNAGIMTDKTTVATNMMAPPQFGVVQQQGHAFMNHYMQQQQQHYNNNFNANGIINGGGVGMNGVDMFNAILDQSKALSKIIEQNNQTQSINSVVGGGGGGASSNSNNVMNISGSKGGGDVMTLDLLGIGGGGAHSNFYGGVQLRLQTRFGAWNRNCIGVTRCSSDREEKLKVKEAVVWSPAEELAKKFERRLLVGIGSASLVALEFIYPVNWVGDQTLLYRAAKRREMELSLDPPPLNLRPRSNVNEPVVAFGPPGSNGELNVSVIVSPVALDFSIEAFGSPEEVGEAVIRTITGSGQQPDVKGTLVKSSLREDTVRNAKYYELEFRVESPSFRRHNVCVCCARGGRLFTLNAQAPESAWPGVKSDFYTIADSFNLTT