AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056122

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056122.t1 MTR_7g450780 95.712 653 28 0 4 656 699 1351 0.0 1247
MS.gene056122.t1 MTR_7g050445 76.515 660 128 6 4 655 662 1302 0.0 994
MS.gene056122.t1 MTR_7g450820 71.818 660 158 9 5 656 600 1239 0.0 918
MS.gene056122.t1 MTR_7g450860 70.416 649 169 8 5 650 644 1272 0.0 868
MS.gene056122.t1 MTR_7g029525 67.835 656 178 8 4 651 694 1324 0.0 846
MS.gene056122.t1 MTR_7g450790 65.549 656 193 8 4 651 809 1439 0.0 830
MS.gene056122.t1 MTR_4g088650 63.872 656 182 9 4 651 610 1218 0.0 789
MS.gene056122.t1 MTR_2g084695 52.125 353 92 7 305 651 9 290 7.48e-99 305
MS.gene056122.t1 MTR_7g026650 33.281 634 357 16 32 635 542 1139 3.87e-95 318
MS.gene056122.t1 MTR_3g071860 34.887 622 331 18 50 635 670 1253 2.68e-93 314
MS.gene056122.t1 MTR_1g081750 33.180 654 351 16 19 635 498 1102 8.19e-93 310
MS.gene056122.t1 MTR_5g083300 32.087 642 351 18 35 635 693 1290 1.93e-91 309
MS.gene056122.t1 MTR_5g083300 32.087 642 351 18 35 635 730 1327 3.32e-91 309
MS.gene056122.t1 MTR_8g037345 30.216 556 306 14 64 603 363 852 1.63e-66 235
MS.gene056122.t1 MTR_2g437480 29.610 564 302 13 62 603 511 1001 2.41e-66 236
MS.gene056122.t1 MTR_1g080420 26.291 639 337 19 54 614 705 1287 6.64e-41 161
MS.gene056122.t1 MTR_1g080420 26.291 639 337 19 54 614 574 1156 7.32e-41 160
MS.gene056122.t1 MTR_7g026620 28.030 528 256 17 43 549 218 642 1.46e-40 157
MS.gene056122.t1 MTR_1g069755 24.434 618 380 15 5 605 338 885 2.71e-27 118
MS.gene056122.t1 MTR_1g035330 24.872 587 315 22 57 589 190 704 1.87e-25 112
MS.gene056122.t1 MTR_8g094070 28.084 381 231 10 261 606 520 892 1.12e-24 110
MS.gene056122.t1 MTR_8g094070 28.084 381 231 10 261 606 520 892 1.14e-24 110
MS.gene056122.t1 MTR_4g096930 25.210 357 232 8 260 606 870 1201 3.60e-23 105
MS.gene056122.t1 MTR_3g106210 27.795 331 210 7 261 585 434 741 1.36e-21 100
MS.gene056122.t1 MTR_3g106210 27.795 331 210 7 261 585 434 741 1.37e-21 100
MS.gene056122.t1 MTR_1g105050 26.648 349 204 12 261 587 501 819 1.63e-21 100
MS.gene056122.t1 MTR_5g020000 24.877 406 256 10 261 640 312 694 2.52e-21 99.4
MS.gene056122.t1 MTR_3g106210 27.795 331 210 7 261 585 434 741 2.79e-21 99.8
MS.gene056122.t1 MTR_3g106210 27.795 331 210 7 261 585 434 741 2.81e-21 99.8
MS.gene056122.t1 MTR_5g005840 26.377 345 209 11 261 587 488 805 4.09e-21 99.0
MS.gene056122.t1 MTR_5g004720 24.211 380 237 11 260 602 322 687 5.60e-21 98.6
MS.gene056122.t1 MTR_4g118845 26.393 341 204 9 261 586 126 434 8.09e-21 97.8
MS.gene056122.t1 MTR_4g118845 26.393 341 204 9 261 586 313 621 8.77e-21 97.8
MS.gene056122.t1 MTR_1g013190 24.685 397 248 10 261 629 432 805 2.74e-20 96.7
MS.gene056122.t1 MTR_7g045505 25.250 400 230 12 262 622 126 495 1.02e-19 94.4
MS.gene056122.t1 MTR_7g045505 25.250 400 230 12 262 622 126 495 1.07e-19 94.4
MS.gene056122.t1 MTR_2g020000 26.506 332 215 7 261 586 316 624 1.10e-19 94.4
MS.gene056122.t1 MTR_5g090090 25.641 390 245 11 261 630 749 1113 9.40e-19 91.7
MS.gene056122.t1 MTR_5g090090 25.385 390 246 11 261 630 749 1113 1.18e-18 91.3
MS.gene056122.t1 MTR_7g039320 25.333 375 214 10 262 622 175 497 3.12e-18 89.7
MS.gene056122.t1 MTR_7g039320 25.333 375 214 10 262 622 175 497 3.97e-18 89.4
MS.gene056122.t1 MTR_4g118720 26.286 350 207 9 261 585 1132 1455 6.24e-18 89.4
MS.gene056122.t1 MTR_4g035100 23.961 409 260 9 262 627 1581 1981 9.12e-18 88.6
MS.gene056122.t1 MTR_4g035100 23.961 409 260 9 262 627 1581 1981 9.19e-18 88.6
MS.gene056122.t1 MTR_3g053910 25.897 390 244 12 261 630 703 1067 5.09e-17 86.3
MS.gene056122.t1 MTR_3g053910 25.897 390 244 12 261 630 732 1096 5.38e-17 86.3
MS.gene056122.t1 MTR_4g078460 41.121 107 62 1 500 606 853 958 4.34e-16 83.2
MS.gene056122.t1 MTR_4g078495 41.121 107 62 1 500 606 567 672 6.32e-16 82.4
MS.gene056122.t1 MTR_1g053955 32.680 153 98 2 451 603 1063 1210 1.06e-15 82.0
MS.gene056122.t1 MTR_7g078090 24.146 410 243 15 261 626 1119 1504 3.53e-15 80.5
MS.gene056122.t1 MTR_1g044120 33.566 143 90 2 466 608 1003 1140 3.22e-14 77.0
MS.gene056122.t1 MTR_7g090960 23.755 261 161 7 388 648 1156 1378 4.40e-14 76.6
MS.gene056122.t1 MTR_7g090960 23.755 261 161 7 388 648 1075 1297 5.06e-14 76.3
MS.gene056122.t1 MTR_7g089190 37.815 119 69 2 468 585 668 782 7.79e-14 75.5
MS.gene056122.t1 MTR_8g030550 25.215 349 208 10 261 578 1111 1437 1.35e-13 75.1
MS.gene056122.t1 MTR_8g030550 25.215 349 208 10 261 578 1111 1437 1.45e-13 75.1
MS.gene056122.t1 MTR_8g030550 25.215 349 208 10 261 578 1111 1437 1.66e-13 74.7
MS.gene056122.t1 MTR_1g115215 30.714 140 92 2 468 607 887 1021 2.51e-13 73.9
MS.gene056122.t1 MTR_2g084630 30.070 143 91 3 468 608 874 1009 3.20e-13 73.6
MS.gene056122.t1 MTR_2g012830 34.677 124 72 3 464 585 1146 1262 3.28e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056122.t1 AT1G05490 51.524 656 279 13 13 654 775 1405 0.0 629
MS.gene056122.t1 AT3G24340 48.154 623 254 11 47 654 563 1131 0.0 547
MS.gene056122.t1 AT3G42670 33.076 647 360 20 22 635 637 1243 3.09e-93 313
MS.gene056122.t1 AT3G42670 33.076 647 360 20 22 635 635 1241 3.16e-93 313
MS.gene056122.t1 AT3G42670 33.076 647 360 20 22 635 635 1241 3.16e-93 313
MS.gene056122.t1 AT3G42670 33.076 647 360 20 22 635 635 1241 3.16e-93 313
MS.gene056122.t1 AT5G20420 31.447 636 366 16 32 635 650 1247 8.92e-89 301
MS.gene056122.t1 AT2G21450 29.703 606 323 18 36 603 142 682 2.87e-71 245
MS.gene056122.t1 AT2G21450 29.734 602 328 18 36 603 233 773 9.24e-71 245
MS.gene056122.t1 AT2G21450 29.734 602 328 18 36 603 240 780 1.04e-70 245
MS.gene056122.t1 AT2G16390 29.663 563 310 15 62 603 353 850 2.07e-68 240
MS.gene056122.t1 AT2G16390 29.663 563 310 15 62 603 350 847 2.29e-68 240
MS.gene056122.t1 AT5G63950 24.532 587 321 18 54 598 369 875 5.64e-29 124
MS.gene056122.t1 AT5G63950 24.061 586 308 16 54 598 369 858 1.47e-28 122
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 436 936 1.96e-27 119
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G18760 25.659 569 338 16 54 605 377 877 2.82e-27 118
MS.gene056122.t1 AT2G44980 27.128 376 219 11 262 612 181 526 4.16e-23 105
MS.gene056122.t1 AT4G31900 24.356 427 254 12 261 654 353 743 6.23e-23 105
MS.gene056122.t1 AT4G31900 24.356 427 254 12 261 654 353 743 7.19e-23 104
MS.gene056122.t1 AT4G31900 24.356 427 254 12 261 654 312 702 1.02e-22 104
MS.gene056122.t1 AT2G02090 22.727 660 346 22 29 611 173 745 1.90e-22 102
MS.gene056122.t1 AT5G44800 24.190 525 303 17 98 606 711 1156 2.26e-22 103
MS.gene056122.t1 AT3G19210 24.352 386 254 9 256 613 314 689 1.66e-21 100
MS.gene056122.t1 AT3G19210 25.000 388 251 10 256 613 314 691 1.72e-21 100
MS.gene056122.t1 AT3G19210 25.000 388 251 10 256 613 314 691 2.12e-21 99.8
MS.gene056122.t1 AT2G25170 25.622 402 239 12 261 629 419 793 3.10e-21 99.8
MS.gene056122.t1 AT2G25170 25.622 402 239 12 261 629 419 793 3.10e-21 99.8
MS.gene056122.t1 AT2G25170 25.622 402 239 12 261 629 436 810 3.46e-21 99.4
MS.gene056122.t1 AT2G25170 25.622 402 239 12 261 629 445 819 3.50e-21 99.4
MS.gene056122.t1 AT3G06010 26.648 349 204 12 261 587 528 846 1.14e-20 97.8
MS.gene056122.t1 AT2G44980 26.221 389 219 12 262 612 186 544 1.40e-20 97.1
MS.gene056122.t1 AT2G13370 26.992 389 238 13 261 630 757 1118 1.46e-20 97.8
MS.gene056122.t1 AT2G13370 26.992 389 238 13 261 630 757 1118 1.46e-20 97.8
MS.gene056122.t1 AT2G13370 26.992 389 238 13 261 630 757 1118 1.46e-20 97.8
MS.gene056122.t1 AT2G44980 26.221 389 219 12 262 612 187 545 1.59e-20 97.1
MS.gene056122.t1 AT5G18620 26.284 331 215 7 261 585 319 626 2.10e-20 97.1
MS.gene056122.t1 AT5G18620 26.284 331 215 7 261 585 319 626 2.12e-20 96.7
MS.gene056122.t1 AT3G06400 26.946 334 211 8 261 586 314 622 2.35e-20 96.7
MS.gene056122.t1 AT3G06400 26.946 334 211 8 261 586 314 622 2.40e-20 96.7
MS.gene056122.t1 AT3G06400 26.946 334 211 8 261 586 314 622 2.50e-20 96.7
MS.gene056122.t1 AT1G08600 35.135 185 108 4 451 623 1116 1300 1.29e-19 94.4
MS.gene056122.t1 AT1G08600 35.135 185 108 4 451 623 1116 1300 1.29e-19 94.4
MS.gene056122.t1 AT1G08600 35.135 185 108 4 451 623 1116 1300 1.29e-19 94.4
MS.gene056122.t1 AT1G08600 35.135 185 108 4 451 623 1095 1279 1.47e-19 94.4
MS.gene056122.t1 AT5G19310 25.648 347 210 11 261 587 246 564 4.35e-19 92.4
MS.gene056122.t1 AT5G19310 25.648 347 210 11 261 587 510 828 7.28e-19 92.0
MS.gene056122.t1 AT3G54280 26.506 415 243 12 262 627 1582 1983 5.19e-18 89.4
MS.gene056122.t1 AT3G54280 26.506 415 243 12 262 627 1613 2014 5.95e-18 89.4
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 881 1255 7.60e-17 85.9
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 882 1256 8.72e-17 85.5
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 881 1255 9.42e-17 85.5
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 881 1255 9.42e-17 85.5
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 882 1256 9.67e-17 85.5
MS.gene056122.t1 AT2G28290 25.191 393 262 7 261 639 881 1255 9.92e-17 85.5
MS.gene056122.t1 AT5G66750 29.032 186 128 1 464 649 538 719 1.37e-16 84.3
MS.gene056122.t1 AT3G57300 24.910 277 158 8 386 648 1157 1397 2.38e-16 84.0
MS.gene056122.t1 AT3G57300 24.910 277 158 8 386 648 1157 1397 2.38e-16 84.0
MS.gene056122.t1 AT3G57300 24.910 277 158 8 386 648 1190 1430 2.84e-16 84.0
MS.gene056122.t1 AT1G03750 36.429 140 84 3 467 606 545 679 1.59e-15 80.9
MS.gene056122.t1 AT5G43530 36.620 142 85 2 467 608 1128 1264 2.70e-15 80.5
MS.gene056122.t1 AT3G12810 34.058 138 86 2 468 605 1089 1221 5.50e-15 79.7
MS.gene056122.t1 AT3G12810 34.058 138 86 2 468 605 1093 1225 5.60e-15 79.7
MS.gene056122.t1 AT5G05130 34.266 143 89 3 466 607 725 863 3.55e-14 76.6
MS.gene056122.t1 AT1G50410 31.429 140 91 2 468 607 828 962 1.61e-13 74.7
MS.gene056122.t1 AT1G50410 31.429 140 91 2 468 607 828 962 1.61e-13 74.7
MS.gene056122.t1 AT1G50410 31.429 140 91 2 468 607 828 962 1.61e-13 74.7
MS.gene056122.t1 AT3G20010 32.143 140 90 2 468 607 628 762 6.11e-13 72.8
MS.gene056122.t1 AT3G20010 32.143 140 90 2 468 607 603 737 6.53e-13 72.4
MS.gene056122.t1 AT3G20010 32.143 140 90 2 468 607 894 1028 6.84e-13 72.8
MS.gene056122.t1 AT3G20010 32.143 140 90 2 468 607 894 1028 6.84e-13 72.8
MS.gene056122.t1 AT3G20010 32.143 140 90 2 468 607 894 1028 6.84e-13 72.8
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1105 1443 1.09e-12 72.4
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1105 1443 1.09e-12 72.4
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1105 1443 1.09e-12 72.4
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1106 1444 1.25e-12 72.0
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1106 1444 1.25e-12 72.0
MS.gene056122.t1 AT2G46020 24.234 359 221 11 261 588 1106 1444 1.25e-12 72.0
MS.gene056122.t1 AT1G61140 34.146 123 72 3 465 585 1122 1237 1.57e-12 71.6
MS.gene056122.t1 AT1G61140 34.146 123 72 3 465 585 964 1079 1.74e-12 71.2
MS.gene056122.t1 AT5G22750 27.848 158 109 2 451 608 864 1016 5.81e-12 69.7
MS.gene056122.t1 AT1G11100 30.065 153 98 3 463 613 969 1114 1.58e-11 68.2
MS.gene056122.t1 AT1G11100 30.065 153 98 3 463 613 925 1070 1.63e-11 68.2
MS.gene056122.t1 AT1G11100 30.065 153 98 3 463 613 1111 1256 1.65e-11 68.2
MS.gene056122.t1 AT1G11100 30.065 153 98 3 463 613 1112 1257 1.71e-11 68.2
MS.gene056122.t1 AT1G11100 30.065 153 98 3 463 613 1068 1213 1.82e-11 68.2

Find 122 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAAGCTCTTCTCTTAAT+TGG 0.126435 7.3:+55001623 MS.gene056122:CDS
TATAGTCAACCTTGTCTTTC+CGG 0.179157 7.3:-55000483 None:intergenic
TCCAGCTGGGAACTGGATTC+TGG 0.191325 7.3:+55001181 MS.gene056122:CDS
ATGCCGTTAATTTGCATAAT+TGG 0.193788 7.3:+55000669 MS.gene056122:CDS
AACAAACGGATTATACTTTC+TGG 0.202068 7.3:+55001025 MS.gene056122:CDS
AACCTTGTCTTTCCGGTTCC+AGG 0.268145 7.3:-55000476 None:intergenic
GTATAATCCGTTTGTTTGTT+TGG 0.282146 7.3:-55001018 None:intergenic
CTGCGAGTTTGTTACTTACT+TGG 0.287565 7.3:+55000564 MS.gene056122:CDS
ACAATGACTGGCAAGCATTT+AGG 0.296236 7.3:-55000536 None:intergenic
AAGAAGGCTTTGAGTTCATT+TGG 0.296646 7.3:+55000369 MS.gene056122:CDS
AATTAAGAGAAGAGCTTAAT+TGG 0.300187 7.3:-55001621 None:intergenic
TTTGCTCGAATGTAAACTTT+TGG 0.306948 7.3:+55001429 MS.gene056122:CDS
CAAGCAGTTGAAGTTGCTTA+TGG 0.307193 7.3:+55001225 MS.gene056122:CDS
CTTTCACATCATCAGGAATT+AGG 0.309588 7.3:-55000325 None:intergenic
CTCATAATGAAGGCACTGTT+TGG 0.313867 7.3:+55000300 MS.gene056122:CDS
CTCTCTTTCTATAACCTTCA+TGG 0.314230 7.3:-55000193 None:intergenic
GTAAATGCCTCACTCTTTGA+TGG 0.340667 7.3:+55000233 MS.gene056122:CDS
ACTTGAAGCTCCTGGTTTGT+TGG 0.356534 7.3:+55000931 MS.gene056122:CDS
ATCCTTCAAAAGAAACTTCC+CGG 0.357710 7.3:+55001277 MS.gene056122:CDS
AAGGTTTCTTTCACATCATC+AGG 0.364457 7.3:-55000332 None:intergenic
CGACCAATTATGCAAATTAA+CGG 0.371132 7.3:-55000672 None:intergenic
GGCATCACCATGCTCTTTAC+CGG 0.372710 7.3:-55000651 None:intergenic
CATGTACAGAATTTCTTTGT+CGG 0.383091 7.3:-55001647 None:intergenic
ATCTCCCATGCTCCTGGAAC+CGG 0.393951 7.3:+55000464 MS.gene056122:CDS
GTACAAAGAAAGTAGCATTC+TGG 0.397195 7.3:+55000745 MS.gene056122:CDS
GAGAAATGATTATATGAGAA+AGG 0.404224 7.3:+55000904 MS.gene056122:CDS
TGCATTATCTCCCATGCTCC+TGG 0.408677 7.3:+55000458 MS.gene056122:CDS
TCGACAAAATCTCGCTCCTT+CGG 0.414619 7.3:-55002102 None:intergenic
AGTTTGTTCAAATTGTGAAA+TGG 0.416126 7.3:-55000620 None:intergenic
CCAGCTGGGAACTGGATTCT+GGG 0.416349 7.3:+55001182 MS.gene056122:CDS
TCTCTTCTGTCCAATCCTAT+AGG 0.425976 7.3:-55001860 None:intergenic
TTGAACAAACTTGAGTTATC+CGG 0.432324 7.3:+55000632 MS.gene056122:CDS
TCCATGAAATTGTTCTGAAA+AGG 0.432806 7.3:-55001052 None:intergenic
TCTCTTTCTATAACCTTCAT+GGG 0.433057 7.3:-55000192 None:intergenic
TACAAAGAAAGTAGCATTCT+GGG 0.434956 7.3:+55000746 MS.gene056122:CDS
GAGAAGCTAGCTGGAGGAGG+GGG 0.444338 7.3:+55000788 MS.gene056122:CDS
AAAGTCCACAGCACAACTCT+TGG 0.448688 7.3:-55002007 None:intergenic
TCTTCTTTGGAATATGTTGT+TGG 0.449183 7.3:+55000991 MS.gene056122:CDS
TCATAATGAAGGCACTGTTT+GGG 0.450315 7.3:+55000301 MS.gene056122:CDS
TCTTTCCGGTTCCAGGAGCA+TGG 0.457877 7.3:-55000469 None:intergenic
CCCAGAATCCAGTTCCCAGC+TGG 0.466993 7.3:-55001182 None:intergenic
GCACCTAAAATATTTCAAAC+AGG 0.476189 7.3:+55001924 MS.gene056122:CDS
AAAAGACGAGCTCAGATAAC+CGG 0.486050 7.3:-55001957 None:intergenic
AGGCTATCAGCAGAGCCTAT+AGG 0.487040 7.3:+55001845 MS.gene056122:CDS
GTTTGCTTCTGAAAACTGTC+CGG 0.488894 7.3:-55001328 None:intergenic
GCCACCCTCCCTGCGAGGAT+CGG 0.489802 7.3:-55000435 None:intergenic
ATTGATAGATTTCCCCATGA+AGG 0.492423 7.3:+55000179 MS.gene056122:CDS
ATATTTCAAACAGGCCGAAA+AGG 0.494819 7.3:+55001933 MS.gene056122:CDS
GTCGAATGCACGACCTAGTA+AGG 0.497062 7.3:+55000691 MS.gene056122:CDS
TGGTCTTTAATTAAGCGTAA+AGG 0.501210 7.3:-55001601 None:intergenic
AGTTTGCATCGTTGAAGCTA+TGG 0.502441 7.3:-55001708 None:intergenic
TTGTGCTGCTCGATGTTGTA+TGG 0.502534 7.3:+55001803 MS.gene056122:CDS
ATCAGCAGAGCCTATAGGAT+TGG 0.502705 7.3:+55001850 MS.gene056122:CDS
AGTTTGTACGAGAAGCTAGC+TGG 0.507351 7.3:+55000779 MS.gene056122:CDS
ACTAATTTCTCTCATAATGA+AGG 0.512782 7.3:+55000290 MS.gene056122:CDS
CTCGCAGGTGCAACAATGAC+TGG 0.513705 7.3:-55000548 None:intergenic
CTTTCCGGTTCCAGGAGCAT+GGG 0.513984 7.3:-55000468 None:intergenic
TACGAGAAGCTAGCTGGAGG+AGG 0.514571 7.3:+55000785 MS.gene056122:CDS
TGCGAGTTTGTTACTTACTT+GGG 0.517781 7.3:+55000565 MS.gene056122:CDS
CAGCATACAATTTCTTAACC+CGG 0.518018 7.3:-55001296 None:intergenic
TGAGTAAAACCGATCCTCGC+AGG 0.519904 7.3:+55000426 MS.gene056122:CDS
TCCGAGGGAATTAGCTTAGT+CGG 0.520869 7.3:+55001769 MS.gene056122:CDS
TGGAGATCCAAACAAACAAA+CGG 0.521879 7.3:+55001011 MS.gene056122:CDS
AATCTGTTCTCGACAAGGAC+CGG 0.523377 7.3:+55001461 MS.gene056122:CDS
CTTGTGTTCAGCGAATTACT+CGG 0.523761 7.3:+55001577 MS.gene056122:CDS
GTTGACTATAATGTTTCTCA+TGG 0.523878 7.3:+55000496 MS.gene056122:CDS
TCAAACAGGCCGAAAAGGAC+CGG 0.524374 7.3:+55001938 MS.gene056122:CDS
ATAGCCTGCCTTTCGACTGA+AGG 0.526425 7.3:-55001829 None:intergenic
CGACAAAGAAATTCTGTACA+TGG 0.531136 7.3:+55001648 MS.gene056122:CDS
CCTTTGTGAACATGAACAAA+GGG 0.537964 7.3:-55001250 None:intergenic
TTGTATGCTGACTTTGAAGC+CGG 0.538574 7.3:+55001309 MS.gene056122:CDS
GAATCCTTCAGTCGAAAGGC+AGG 0.539562 7.3:+55001825 MS.gene056122:CDS
CGAGAAGCTAGCTGGAGGAG+GGG 0.542133 7.3:+55000787 MS.gene056122:CDS
GAAGCTAGCTGGAGGAGGGG+GGG 0.542511 7.3:+55000790 MS.gene056122:CDS
CCCTTTGTTCATGTTCACAA+AGG 0.545734 7.3:+55001250 MS.gene056122:CDS
ACGAGAAGCTAGCTGGAGGA+GGG 0.553807 7.3:+55000786 MS.gene056122:CDS
TAAGTGTGTGGTTCAGCCGA+AGG 0.556202 7.3:+55002086 MS.gene056122:CDS
ATGCAAGTAGAATCTTTGCT+TGG 0.557067 7.3:-55001732 None:intergenic
AGAAGCTAGCTGGAGGAGGG+GGG 0.558177 7.3:+55000789 MS.gene056122:CDS
GGTTAGATTAAAAGAAAAGC+AGG 0.560581 7.3:+55001678 MS.gene056122:CDS
TCTAAGTTCAATGTTTCTGA+TGG 0.562503 7.3:+55000257 MS.gene056122:CDS
AAGCTTCGATTGAATCCAAA+CGG 0.563349 7.3:+55001490 MS.gene056122:CDS
GGATGGTGAAACTGATTTCG+TGG 0.564249 7.3:+55000723 MS.gene056122:CDS
ACCGATCCTCGCAGGGAGGG+TGG 0.565344 7.3:+55000434 MS.gene056122:CDS
TCCTTCAAAAGAAACTTCCC+GGG 0.569388 7.3:+55001278 MS.gene056122:CDS
TGGTCCCTTCAGTGAGCAGA+TGG 0.576518 7.3:-55001897 None:intergenic
TCCGACTAAGCTAATTCCCT+CGG 0.579125 7.3:-55001770 None:intergenic
TTGTGATGCTGTCAACGAGA+AGG 0.580438 7.3:+55001552 MS.gene056122:CDS
AGCATACAATTTCTTAACCC+GGG 0.580778 7.3:-55001295 None:intergenic
TCGACAAGAGCTTGTTCCGA+GGG 0.583139 7.3:+55001754 MS.gene056122:CDS
TTAGCTTAGTCGGAGCATCA+AGG 0.586839 7.3:+55001779 MS.gene056122:CDS
AAAGAAATTCTGTACATGGA+TGG 0.590468 7.3:+55001652 MS.gene056122:CDS
ACATACCATCTGCTCACTGA+AGG 0.592728 7.3:+55001892 MS.gene056122:CDS
CAAGTAAGTAACAAACTCGC+AGG 0.599548 7.3:-55000563 None:intergenic
CTCTGAGCCTAAGCTGACAA+TGG 0.601135 7.3:+55001387 MS.gene056122:CDS
CATACCATCTGCTCACTGAA+GGG 0.602206 7.3:+55001893 MS.gene056122:CDS
ACAGATGCCATTGTCAGCTT+AGG 0.602630 7.3:-55001394 None:intergenic
GAGTAAAACCGATCCTCGCA+GGG 0.602674 7.3:+55000427 MS.gene056122:CDS
ATTCGAGCAAAAGAGATGGA+TGG 0.607573 7.3:-55001417 None:intergenic
TTACATTCGAGCAAAAGAGA+TGG 0.608339 7.3:-55001421 None:intergenic
ACCTTTGTGAACATGAACAA+AGG 0.610077 7.3:-55001251 None:intergenic
TAGCTTAGTCGGAGCATCAA+GGG 0.612230 7.3:+55001780 MS.gene056122:CDS
AAAACCGATCCTCGCAGGGA+GGG 0.615256 7.3:+55000431 MS.gene056122:CDS
ATCCGCGTTGTATCCTTACT+AGG 0.617817 7.3:-55000704 None:intergenic
GAGTTATCCGGTAAAGAGCA+TGG 0.621350 7.3:+55000644 MS.gene056122:CDS
TATGGAATCCTTCAGTCGAA+AGG 0.621449 7.3:+55001821 MS.gene056122:CDS
ATCGACAAGAGCTTGTTCCG+AGG 0.629517 7.3:+55001753 MS.gene056122:CDS
TCATCGAAAACCAACAAACC+AGG 0.639059 7.3:-55000941 None:intergenic
AGAGGAATCTGTTCTCGACA+AGG 0.639391 7.3:+55001456 MS.gene056122:CDS
AGACATGTTTGTTAAGTGTG+TGG 0.644185 7.3:+55002074 MS.gene056122:CDS
CTCTTTCTATAACCTTCATG+GGG 0.653016 7.3:-55000191 None:intergenic
TAGTAAGGATACAACGCGGA+TGG 0.654590 7.3:+55000706 MS.gene056122:CDS
CTTAGAGCCATCAAAGAGTG+AGG 0.657194 7.3:-55000240 None:intergenic
AATTCTGTACATGGATGGCG+TGG 0.663523 7.3:+55001657 MS.gene056122:CDS
TTGTACGAGAAGCTAGCTGG+AGG 0.670898 7.3:+55000782 MS.gene056122:CDS
CTCCTGGAACCGGAAAGACA+AGG 0.675210 7.3:+55000474 MS.gene056122:CDS
ACAAAGAAAGTAGCATTCTG+GGG 0.677863 7.3:+55000747 MS.gene056122:CDS
ATGCAGCCACCCTCCCTGCG+AGG 0.685159 7.3:-55000440 None:intergenic
TAAAACCGATCCTCGCAGGG+AGG 0.700738 7.3:+55000430 MS.gene056122:CDS
TGAGTCCAAGAGTTGTGCTG+TGG 0.701935 7.3:+55002002 MS.gene056122:CDS
CTTCGATTGAATCCAAACGG+AGG 0.723816 7.3:+55001493 MS.gene056122:CDS
GACCTAGTAAGGATACAACG+CGG 0.871333 7.3:+55000702 MS.gene056122:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTCTTTTTCTTATTTT+TGG - chr7.3:55000867-55000886 None:intergenic 10.0%
! AAAAAGAGAAAAAAAGGAAG+AGG + chr7.3:55000833-55000852 MS.gene056122:CDS 25.0%
! AATTAAGAGAAGAGCTTAAT+TGG - chr7.3:55001624-55001643 None:intergenic 25.0%
! AATTAAGCTCTTCTCTTAAT+TGG + chr7.3:55001623-55001642 MS.gene056122:CDS 25.0%
! ACTAATTTCTCTCATAATGA+AGG + chr7.3:55000290-55000309 MS.gene056122:CDS 25.0%
! GAGAAATGATTATATGAGAA+AGG + chr7.3:55000904-55000923 MS.gene056122:CDS 25.0%
! GATGAGAAAAAGAGAAAAAA+AGG + chr7.3:55000827-55000846 MS.gene056122:CDS 25.0%
!! AGGTGTAAAAACCAAATTTT+TGG + chr7.3:55001513-55001532 MS.gene056122:CDS 25.0%
!! AGTTTGTTCAAATTGTGAAA+TGG - chr7.3:55000623-55000642 None:intergenic 25.0%
!!! TGTAAAAACCAAATTTTTGG+TGG + chr7.3:55001516-55001535 MS.gene056122:CDS 25.0%
!!! TTTGAAATATTTTAGGTGCT+CGG - chr7.3:55001923-55001942 None:intergenic 25.0%
AAAGAAATTCTGTACATGGA+TGG + chr7.3:55001652-55001671 MS.gene056122:CDS 30.0%
AACAAACTCCACCAAAAATT+TGG - chr7.3:55001527-55001546 None:intergenic 30.0%
CATGTACAGAATTTCTTTGT+CGG - chr7.3:55001650-55001669 None:intergenic 30.0%
CGACCAATTATGCAAATTAA+CGG - chr7.3:55000675-55000694 None:intergenic 30.0%
GAAGTGAAAAAAGTCTTCTT+TGG + chr7.3:55000978-55000997 MS.gene056122:CDS 30.0%
GCACCTAAAATATTTCAAAC+AGG + chr7.3:55001924-55001943 MS.gene056122:CDS 30.0%
GGTTAGATTAAAAGAAAAGC+AGG + chr7.3:55001678-55001697 MS.gene056122:CDS 30.0%
GTATAATCCGTTTGTTTGTT+TGG - chr7.3:55001021-55001040 None:intergenic 30.0%
GTTGACTATAATGTTTCTCA+TGG + chr7.3:55000496-55000515 MS.gene056122:CDS 30.0%
TACAAAGAAAGTAGCATTCT+GGG + chr7.3:55000746-55000765 MS.gene056122:CDS 30.0%
TCTCTTTCTATAACCTTCAT+GGG - chr7.3:55000195-55000214 None:intergenic 30.0%
TGGTCTTTAATTAAGCGTAA+AGG - chr7.3:55001604-55001623 None:intergenic 30.0%
TTCATTTGGAAAAACTTGAC+AGG + chr7.3:55000383-55000402 MS.gene056122:CDS 30.0%
TTGAACAAACTTGAGTTATC+CGG + chr7.3:55000632-55000651 MS.gene056122:CDS 30.0%
TTGTATCCTCATCAAAAAGA+AGG + chr7.3:55000353-55000372 MS.gene056122:CDS 30.0%
! ACCTTTTCAGAACAATTTCA+TGG + chr7.3:55001051-55001070 MS.gene056122:CDS 30.0%
! TCTAAGTTCAATGTTTCTGA+TGG + chr7.3:55000257-55000276 MS.gene056122:CDS 30.0%
! TTCTTTTTGATGAGGATACA+AGG - chr7.3:55000354-55000373 None:intergenic 30.0%
! TTTGCTCGAATGTAAACTTT+TGG + chr7.3:55001429-55001448 MS.gene056122:CDS 30.0%
!! AACAAACGGATTATACTTTC+TGG + chr7.3:55001025-55001044 MS.gene056122:CDS 30.0%
!! ATGCCGTTAATTTGCATAAT+TGG + chr7.3:55000669-55000688 MS.gene056122:CDS 30.0%
!! TCCATGAAATTGTTCTGAAA+AGG - chr7.3:55001055-55001074 None:intergenic 30.0%
!! TCTTCTTTGGAATATGTTGT+TGG + chr7.3:55000991-55001010 MS.gene056122:CDS 30.0%
!!! AATTTTTGGTGGAGTTTGTT+AGG + chr7.3:55001527-55001546 MS.gene056122:CDS 30.0%
!!! GATATCGTTTTAGGAAATGA+AGG - chr7.3:55001106-55001125 None:intergenic 30.0%
!!! TTCGATGATTTTTTACGTTC+CGG - chr7.3:55001157-55001176 None:intergenic 30.0%
AAGAGAAAAAAAGGAAGAGG+AGG + chr7.3:55000836-55000855 MS.gene056122:CDS 35.0%
AAGCTTCGATTGAATCCAAA+CGG + chr7.3:55001490-55001509 MS.gene056122:CDS 35.0%
AAGGTTTCTTTCACATCATC+AGG - chr7.3:55000335-55000354 None:intergenic 35.0%
AATCATCGAAAAAATCCAGC+TGG + chr7.3:55001167-55001186 MS.gene056122:CDS 35.0%
ACAAAGAAAGTAGCATTCTG+GGG + chr7.3:55000747-55000766 MS.gene056122:CDS 35.0%
ACCTTTGTGAACATGAACAA+AGG - chr7.3:55001254-55001273 None:intergenic 35.0%
AGAGAAAAAAAGGAAGAGGA+GGG + chr7.3:55000837-55000856 MS.gene056122:CDS 35.0%
AGCATACAATTTCTTAACCC+GGG - chr7.3:55001298-55001317 None:intergenic 35.0%
ATATTTCAAACAGGCCGAAA+AGG + chr7.3:55001933-55001952 MS.gene056122:CDS 35.0%
ATCATCGAAAAAATCCAGCT+GGG + chr7.3:55001168-55001187 MS.gene056122:CDS 35.0%
ATCCTTCAAAAGAAACTTCC+CGG + chr7.3:55001277-55001296 MS.gene056122:CDS 35.0%
ATGCAAGTAGAATCTTTGCT+TGG - chr7.3:55001735-55001754 None:intergenic 35.0%
ATTGATAGATTTCCCCATGA+AGG + chr7.3:55000179-55000198 MS.gene056122:CDS 35.0%
CAGCATACAATTTCTTAACC+CGG - chr7.3:55001299-55001318 None:intergenic 35.0%
CCTTTGTGAACATGAACAAA+GGG - chr7.3:55001253-55001272 None:intergenic 35.0%
CGACAAAGAAATTCTGTACA+TGG + chr7.3:55001648-55001667 MS.gene056122:CDS 35.0%
CTCTCTTTCTATAACCTTCA+TGG - chr7.3:55000196-55000215 None:intergenic 35.0%
CTCTTTCTATAACCTTCATG+GGG - chr7.3:55000194-55000213 None:intergenic 35.0%
CTTTCACATCATCAGGAATT+AGG - chr7.3:55000328-55000347 None:intergenic 35.0%
GGAAGACGAGTTCAAAAAAT+GGG + chr7.3:55000586-55000605 MS.gene056122:CDS 35.0%
GTACAAAGAAAGTAGCATTC+TGG + chr7.3:55000745-55000764 MS.gene056122:CDS 35.0%
TATAGTCAACCTTGTCTTTC+CGG - chr7.3:55000486-55000505 None:intergenic 35.0%
TGGAGATCCAAACAAACAAA+CGG + chr7.3:55001011-55001030 MS.gene056122:CDS 35.0%
TTACATTCGAGCAAAAGAGA+TGG - chr7.3:55001424-55001443 None:intergenic 35.0%
! AGACATGTTTGTTAAGTGTG+TGG + chr7.3:55002074-55002093 MS.gene056122:CDS 35.0%
! TCAAAGCCTTCTTTTTGATG+AGG - chr7.3:55000362-55000381 None:intergenic 35.0%
!! AAGAAGGCTTTGAGTTCATT+TGG + chr7.3:55000369-55000388 MS.gene056122:CDS 35.0%
!! ATGTAAACTTTTGGAGGAAG+AGG + chr7.3:55001438-55001457 MS.gene056122:CDS 35.0%
!! CGGCCTGTTTGAAATATTTT+AGG - chr7.3:55001930-55001949 None:intergenic 35.0%
!! TCATAATGAAGGCACTGTTT+GGG + chr7.3:55000301-55000320 MS.gene056122:CDS 35.0%
!! TGCGAGTTTGTTACTTACTT+GGG + chr7.3:55000565-55000584 MS.gene056122:CDS 35.0%
AAAAGACGAGCTCAGATAAC+CGG - chr7.3:55001960-55001979 None:intergenic 40.0%
ACAATGACTGGCAAGCATTT+AGG - chr7.3:55000539-55000558 None:intergenic 40.0%
AGTTTGCATCGTTGAAGCTA+TGG - chr7.3:55001711-55001730 None:intergenic 40.0%
ATTCGAGCAAAAGAGATGGA+TGG - chr7.3:55001420-55001439 None:intergenic 40.0%
CAAGCAGTTGAAGTTGCTTA+TGG + chr7.3:55001225-55001244 MS.gene056122:CDS 40.0%
CAAGTAAGTAACAAACTCGC+AGG - chr7.3:55000566-55000585 None:intergenic 40.0%
CCCTTTGTTCATGTTCACAA+AGG + chr7.3:55001250-55001269 MS.gene056122:CDS 40.0%
CTTGTGTTCAGCGAATTACT+CGG + chr7.3:55001577-55001596 MS.gene056122:CDS 40.0%
GAGTTCAAAAAATGGGACGT+TGG + chr7.3:55000593-55000612 MS.gene056122:CDS 40.0%
GGGAAGACGAGTTCAAAAAA+TGG + chr7.3:55000585-55000604 MS.gene056122:CDS 40.0%
GTAAATGCCTCACTCTTTGA+TGG + chr7.3:55000233-55000252 MS.gene056122:CDS 40.0%
TATGGAATCCTTCAGTCGAA+AGG + chr7.3:55001821-55001840 MS.gene056122:CDS 40.0%
TCATCGAAAACCAACAAACC+AGG - chr7.3:55000944-55000963 None:intergenic 40.0%
TCCTTCAAAAGAAACTTCCC+GGG + chr7.3:55001278-55001297 MS.gene056122:CDS 40.0%
TCTCTTCTGTCCAATCCTAT+AGG - chr7.3:55001863-55001882 None:intergenic 40.0%
! AAGGTTTTACTTGAAGCTCC+TGG + chr7.3:55000923-55000942 MS.gene056122:CDS 40.0%
! CGAGATTTTGTCGAGAGTTT+CGG + chr7.3:55002111-55002130 MS.gene056122:CDS 40.0%
! GAAAAACTTTTGCCAGAAGC+CGG + chr7.3:55001135-55001154 MS.gene056122:CDS 40.0%
! GCTCGAATGTAAACTTTTGG+AGG + chr7.3:55001432-55001451 MS.gene056122:CDS 40.0%
! GTTATCTGAGCTCGTCTTTT+CGG + chr7.3:55001960-55001979 MS.gene056122:CDS 40.0%
! GTTTGCTTCTGAAAACTGTC+CGG - chr7.3:55001331-55001350 None:intergenic 40.0%
!! CTCATAATGAAGGCACTGTT+TGG + chr7.3:55000300-55000319 MS.gene056122:CDS 40.0%
!! CTGCGAGTTTGTTACTTACT+TGG + chr7.3:55000564-55000583 MS.gene056122:CDS 40.0%
!! GAAATATTTTAGGTGCTCGG+TGG - chr7.3:55001920-55001939 None:intergenic 40.0%
!! TCAATCGAAGCTTTTCTAGC+CGG - chr7.3:55001483-55001502 None:intergenic 40.0%
!! TTGGTTTTTACACCTCCGTT+TGG - chr7.3:55001508-55001527 None:intergenic 40.0%
!! TTGTATGCTGACTTTGAAGC+CGG + chr7.3:55001309-55001328 MS.gene056122:CDS 40.0%
!!! ATTTTTTACGTTCCGGCTTC+TGG - chr7.3:55001150-55001169 None:intergenic 40.0%
!!! GGTTTGTTGGTTTTCGATGA+AGG + chr7.3:55000944-55000963 MS.gene056122:CDS 40.0%
AAAGTCCACAGCACAACTCT+TGG - chr7.3:55002010-55002029 None:intergenic 45.0%
AATCTGTTCTCGACAAGGAC+CGG + chr7.3:55001461-55001480 MS.gene056122:CDS 45.0%
AATTCTGTACATGGATGGCG+TGG + chr7.3:55001657-55001676 MS.gene056122:CDS 45.0%
ACAGATGCCATTGTCAGCTT+AGG - chr7.3:55001397-55001416 None:intergenic 45.0%
ACATACCATCTGCTCACTGA+AGG + chr7.3:55001892-55001911 MS.gene056122:CDS 45.0%
AGAGGAATCTGTTCTCGACA+AGG + chr7.3:55001456-55001475 MS.gene056122:CDS 45.0%
AGTTTGTACGAGAAGCTAGC+TGG + chr7.3:55000779-55000798 MS.gene056122:CDS 45.0%
ATCAGCAGAGCCTATAGGAT+TGG + chr7.3:55001850-55001869 MS.gene056122:CDS 45.0%
ATCCGCGTTGTATCCTTACT+AGG - chr7.3:55000707-55000726 None:intergenic 45.0%
CATACCATCTGCTCACTGAA+GGG + chr7.3:55001893-55001912 MS.gene056122:CDS 45.0%
CTTAGAGCCATCAAAGAGTG+AGG - chr7.3:55000243-55000262 None:intergenic 45.0%
CTTCGATTGAATCCAAACGG+AGG + chr7.3:55001493-55001512 MS.gene056122:CDS 45.0%
GAAAAAATCCAGCTGGGAAC+TGG + chr7.3:55001174-55001193 MS.gene056122:CDS 45.0%
GACCTAGTAAGGATACAACG+CGG + chr7.3:55000702-55000721 MS.gene056122:CDS 45.0%
GAGTTATCCGGTAAAGAGCA+TGG + chr7.3:55000644-55000663 MS.gene056122:CDS 45.0%
TAGTAAGGATACAACGCGGA+TGG + chr7.3:55000706-55000725 MS.gene056122:CDS 45.0%
TCCGACTAAGCTAATTCCCT+CGG - chr7.3:55001773-55001792 None:intergenic 45.0%
TCGACAAAATCTCGCTCCTT+CGG - chr7.3:55002105-55002124 None:intergenic 45.0%
TTGTGATGCTGTCAACGAGA+AGG + chr7.3:55001552-55001571 MS.gene056122:CDS 45.0%
! ACCCGGGAAGTTTCTTTTGA+AGG - chr7.3:55001282-55001301 None:intergenic 45.0%
! ACTTGAAGCTCCTGGTTTGT+TGG + chr7.3:55000931-55000950 MS.gene056122:CDS 45.0%
! AGCTCGAGCGATATCGTTTT+AGG - chr7.3:55001115-55001134 None:intergenic 45.0%
! CTCAGATAACCGGTCCTTTT+CGG - chr7.3:55001950-55001969 None:intergenic 45.0%
! GGATGGTGAAACTGATTTCG+TGG + chr7.3:55000723-55000742 MS.gene056122:CDS 45.0%
! TAGCTTAGTCGGAGCATCAA+GGG + chr7.3:55001780-55001799 MS.gene056122:CDS 45.0%
! TCCGAGGGAATTAGCTTAGT+CGG + chr7.3:55001769-55001788 MS.gene056122:CDS 45.0%
! TTAGCTTAGTCGGAGCATCA+AGG + chr7.3:55001779-55001798 MS.gene056122:CDS 45.0%
! TTGTGCTGCTCGATGTTGTA+TGG + chr7.3:55001803-55001822 MS.gene056122:CDS 45.0%
AACCTTGTCTTTCCGGTTCC+AGG - chr7.3:55000479-55000498 None:intergenic 50.0%
AGGCTATCAGCAGAGCCTAT+AGG + chr7.3:55001845-55001864 MS.gene056122:CDS 50.0%
ATAGCCTGCCTTTCGACTGA+AGG - chr7.3:55001832-55001851 None:intergenic 50.0%
CTCTGAGCCTAAGCTGACAA+TGG + chr7.3:55001387-55001406 MS.gene056122:CDS 50.0%
GAATCCTTCAGTCGAAAGGC+AGG + chr7.3:55001825-55001844 MS.gene056122:CDS 50.0%
GAGTAAAACCGATCCTCGCA+GGG + chr7.3:55000427-55000446 MS.gene056122:CDS 50.0%
GGCATCACCATGCTCTTTAC+CGG - chr7.3:55000654-55000673 None:intergenic 50.0%
GTCGAATGCACGACCTAGTA+AGG + chr7.3:55000691-55000710 MS.gene056122:CDS 50.0%
TAAGTGTGTGGTTCAGCCGA+AGG + chr7.3:55002086-55002105 MS.gene056122:CDS 50.0%
TCAAACAGGCCGAAAAGGAC+CGG + chr7.3:55001938-55001957 MS.gene056122:CDS 50.0%
TGAGTAAAACCGATCCTCGC+AGG + chr7.3:55000426-55000445 MS.gene056122:CDS 50.0%
TGAGTCCAAGAGTTGTGCTG+TGG + chr7.3:55002002-55002021 MS.gene056122:CDS 50.0%
TGCATTATCTCCCATGCTCC+TGG + chr7.3:55000458-55000477 MS.gene056122:CDS 50.0%
TTGTACGAGAAGCTAGCTGG+AGG + chr7.3:55000782-55000801 MS.gene056122:CDS 50.0%
! ATCGACAAGAGCTTGTTCCG+AGG + chr7.3:55001753-55001772 MS.gene056122:CDS 50.0%
! TCGACAAGAGCTTGTTCCGA+GGG + chr7.3:55001754-55001773 MS.gene056122:CDS 50.0%
AAAACCGATCCTCGCAGGGA+GGG + chr7.3:55000431-55000450 MS.gene056122:CDS 55.0%
ACGAGAAGCTAGCTGGAGGA+GGG + chr7.3:55000786-55000805 MS.gene056122:CDS 55.0%
ATCTCCCATGCTCCTGGAAC+CGG + chr7.3:55000464-55000483 MS.gene056122:CDS 55.0%
CCAGCTGGGAACTGGATTCT+GGG + chr7.3:55001182-55001201 MS.gene056122:CDS 55.0%
CTCCTGGAACCGGAAAGACA+AGG + chr7.3:55000474-55000493 MS.gene056122:CDS 55.0%
CTCGCAGGTGCAACAATGAC+TGG - chr7.3:55000551-55000570 None:intergenic 55.0%
TAAAACCGATCCTCGCAGGG+AGG + chr7.3:55000430-55000449 MS.gene056122:CDS 55.0%
TACGAGAAGCTAGCTGGAGG+AGG + chr7.3:55000785-55000804 MS.gene056122:CDS 55.0%
TCCAGCTGGGAACTGGATTC+TGG + chr7.3:55001181-55001200 MS.gene056122:CDS 55.0%
TCTTTCCGGTTCCAGGAGCA+TGG - chr7.3:55000472-55000491 None:intergenic 55.0%
TGGTCCCTTCAGTGAGCAGA+TGG - chr7.3:55001900-55001919 None:intergenic 55.0%
! CTTTCCGGTTCCAGGAGCAT+GGG - chr7.3:55000471-55000490 None:intergenic 55.0%
AGAAGCTAGCTGGAGGAGGG+GGG + chr7.3:55000789-55000808 MS.gene056122:CDS 60.0%
CCCAGAATCCAGTTCCCAGC+TGG - chr7.3:55001185-55001204 None:intergenic 60.0%
CGAGAAGCTAGCTGGAGGAG+GGG + chr7.3:55000787-55000806 MS.gene056122:CDS 60.0%
GAGAAGCTAGCTGGAGGAGG+GGG + chr7.3:55000788-55000807 MS.gene056122:CDS 60.0%
GAAGCTAGCTGGAGGAGGGG+GGG + chr7.3:55000790-55000809 MS.gene056122:CDS 65.0%
ACCGATCCTCGCAGGGAGGG+TGG + chr7.3:55000434-55000453 MS.gene056122:CDS 70.0%
ATGCAGCCACCCTCCCTGCG+AGG - chr7.3:55000443-55000462 None:intergenic 70.0%
GCCACCCTCCCTGCGAGGAT+CGG - chr7.3:55000438-55000457 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 55000170 55002140 55000170 ID=MS.gene056122
chr7.3 mRNA 55000170 55002140 55000170 ID=MS.gene056122.t1;Parent=MS.gene056122
chr7.3 exon 55000170 55002140 55000170 ID=MS.gene056122.t1.exon1;Parent=MS.gene056122.t1
chr7.3 CDS 55000170 55002140 55000170 ID=cds.MS.gene056122.t1;Parent=MS.gene056122.t1
Gene Sequence

>MS.gene056122

ATGACACAGATTGATAGATTTCCCCATGAAGGTTATAGAAAGAGAGCTTCATTTGATGATTCAGTAAATGCCTCACTCTTTGATGGCTCTAAGTTCAATGTTTCTGATGGTGAATCAGAGACTAATTTCTCTCATAATGAAGGCACTGTTTGGGACCTAATTCCTGATGATGTGAAAGAAACCTTGTATCCTCATCAAAAAGAAGGCTTTGAGTTCATTTGGAAAAACTTGACAGGACACATCGATCTTCACAAGTTGAGTAAAACCGATCCTCGCAGGGAGGGTGGCTGCATTATCTCCCATGCTCCTGGAACCGGAAAGACAAGGTTGACTATAATGTTTCTCATGGCATATCTGAAAGTGTTTCCTAAATGCTTGCCAGTCATTGTTGCACCTGCGAGTTTGTTACTTACTTGGGAAGACGAGTTCAAAAAATGGGACGTTGGAGTTCCATTTCACAATTTGAACAAACTTGAGTTATCCGGTAAAGAGCATGGTGATGCCGTTAATTTGCATAATTGGTCGAATGCACGACCTAGTAAGGATACAACGCGGATGGTGAAACTGATTTCGTGGTACAAAGAAAGTAGCATTCTGGGGATCAGTTACAGTTTGTACGAGAAGCTAGCTGGAGGAGGGGGGGAATCTGATGATGAAGATGAGAAAAAGAGAAAAAAAGGAAGAGGAGGGCGATCCAAAAATAAGAAAAAGAAAAAATACGCAAGTGCAGAGAAGAGAAATGATTATATGAGAAAGGTTTTACTTGAAGCTCCTGGTTTGTTGGTTTTCGATGAAGGACATACATCGAGAAGTGAAAAAAGTCTTCTTTGGAATATGTTGTTGGAGATCCAAACAAACAAACGGATTATACTTTCTGGAACACCTTTTCAGAACAATTTCATGGAACTGTACAACACTCTGAGCTTAATGAAGCCTTCATTTCCTAAAACGATATCGCTCGAGCTGAAAAACTTTTGCCAGAAGCCGGAACGTAAAAAATCATCGAAAAAATCCAGCTGGGAACTGGATTCTGGGAATTCTTCTGATGATAAGATCAAGCAGTTGAAGTTGCTTATGGATCCCTTTGTTCATGTTCACAAAGGTGCGATCCTTCAAAAGAAACTTCCCGGGTTAAGAAATTGTATGCTGACTTTGAAGCCGGACAGTTTTCAGAAGCAAACTCTTGAGAGCATTAAAAGTTCTCACAACATTTTTATCTCTGAGCCTAAGCTGACAATGGCATCTGTCCATCCATCTCTTTTGCTCGAATGTAAACTTTTGGAGGAAGAGGAATCTGTTCTCGACAAGGACCGGCTAGAAAAGCTTCGATTGAATCCAAACGGAGGTGTAAAAACCAAATTTTTGGTGGAGTTTGTTAGGCTTTGTGATGCTGTCAACGAGAAGGTTCTTGTGTTCAGCGAATTACTCGGTCCTTTACGCTTAATTAAAGACCAATTAAGCTCTTCTCTTAATTGGACCGACAAAGAAATTCTGTACATGGATGGCGTGGTTAGATTAAAAGAAAAGCAGGAGCTAATCCATAGCTTCAACGATGCAAACTGCCAAGCAAAGATTCTACTTGCATCGACAAGAGCTTGTTCCGAGGGAATTAGCTTAGTCGGAGCATCAAGGGTTGTGCTGCTCGATGTTGTATGGAATCCTTCAGTCGAAAGGCAGGCTATCAGCAGAGCCTATAGGATTGGACAGAAGAGAGTTGTCTACACATACCATCTGCTCACTGAAGGGACCACCGAGCACCTAAAATATTTCAAACAGGCCGAAAAGGACCGGTTATCTGAGCTCGTCTTTTCGGATAAACACATTGATAATGATGAGTCCAAGAGTTGTGCTGTGGACTTTGATGATAATGTTCTTGATCTGATGCTTCAGCACAAAAAACTTAAAGACATGTTTGTTAAGTGTGTGGTTCAGCCGAAGGAGCGAGATTTTGTCGAGAGTTTCGGCTATTGA
Protein sequence

>MS.gene056122.t1

MTQIDRFPHEGYRKRASFDDSVNASLFDGSKFNVSDGESETNFSHNEGTVWDLIPDDVKETLYPHQKEGFEFIWKNLTGHIDLHKLSKTDPRREGGCIISHAPGTGKTRLTIMFLMAYLKVFPKCLPVIVAPASLLLTWEDEFKKWDVGVPFHNLNKLELSGKEHGDAVNLHNWSNARPSKDTTRMVKLISWYKESSILGISYSLYEKLAGGGGESDDEDEKKRKKGRGGRSKNKKKKKYASAEKRNDYMRKVLLEAPGLLVFDEGHTSRSEKSLLWNMLLEIQTNKRIILSGTPFQNNFMELYNTLSLMKPSFPKTISLELKNFCQKPERKKSSKKSSWELDSGNSSDDKIKQLKLLMDPFVHVHKGAILQKKLPGLRNCMLTLKPDSFQKQTLESIKSSHNIFISEPKLTMASVHPSLLLECKLLEEEESVLDKDRLEKLRLNPNGGVKTKFLVEFVRLCDAVNEKVLVFSELLGPLRLIKDQLSSSLNWTDKEILYMDGVVRLKEKQELIHSFNDANCQAKILLASTRACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRIGQKRVVYTYHLLTEGTTEHLKYFKQAEKDRLSELVFSDKHIDNDESKSCAVDFDDNVLDLMLQHKKLKDMFVKCVVQPKERDFVESFGY