AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056140.t1 MTR_6g044690 83.569 566 23 3 1 496 1 566 0.0 919
MS.gene056140.t1 MTR_6g043960 76.190 504 31 3 62 496 1 484 0.0 752
MS.gene056140.t1 MTR_0376s0030 66.726 562 113 5 7 497 7 565 0.0 730
MS.gene056140.t1 MTR_2g054460 69.826 517 35 6 52 497 1 467 0.0 683
MS.gene056140.t1 MTR_1g035420 55.535 551 175 12 5 494 105 646 0.0 567
MS.gene056140.t1 MTR_8g070070 57.014 442 136 6 103 494 320 757 4.12e-171 501
MS.gene056140.t1 MTR_8g070075 55.204 442 144 6 103 494 313 750 1.88e-167 491
MS.gene056140.t1 MTR_1g035400 52.071 507 172 9 55 494 63 565 5.27e-166 481
MS.gene056140.t1 MTR_8g071030 47.048 542 181 8 55 494 200 737 4.58e-162 478
MS.gene056140.t1 MTR_7g088370 35.163 492 248 11 60 494 203 680 2.66e-88 285
MS.gene056140.t1 MTR_8g042750 35.944 498 250 14 60 494 167 658 1.00e-83 273
MS.gene056140.t1 MTR_3g011440 33.072 511 268 12 44 495 140 635 3.97e-83 271
MS.gene056140.t1 MTR_5g013420 36.768 495 234 17 60 492 581 1058 1.42e-77 263
MS.gene056140.t1 MTR_5g013420 36.768 495 234 17 60 492 581 1058 1.49e-77 263
MS.gene056140.t1 MTR_4g010830 36.484 455 220 13 88 492 514 949 2.98e-77 261
MS.gene056140.t1 MTR_6g061270 32.495 477 234 13 89 493 204 664 2.73e-70 237
MS.gene056140.t1 MTR_4g010550 34.216 453 203 14 88 492 28 433 3.37e-69 229
MS.gene056140.t1 MTR_7g084090 32.911 474 237 13 89 493 266 727 3.25e-68 233
MS.gene056140.t1 MTR_6g061200 31.838 468 220 13 89 493 204 635 1.42e-63 219
MS.gene056140.t1 MTR_7g084090 34.637 358 158 11 89 382 266 611 3.59e-53 190
MS.gene056140.t1 MTR_7g445710 29.594 419 230 13 103 492 130 512 6.89e-45 165
MS.gene056140.t1 MTR_7g445530 29.356 419 231 13 103 492 130 512 1.26e-44 164
MS.gene056140.t1 MTR_1g048950 28.764 518 274 12 33 492 27 507 1.30e-44 165
MS.gene056140.t1 MTR_7g450730 30.303 429 229 15 73 492 107 474 5.59e-44 162
MS.gene056140.t1 MTR_6g044000 64.167 120 14 1 62 152 1 120 1.79e-39 141
MS.gene056140.t1 MTR_6g044000 100.000 56 0 0 442 497 117 172 1.98e-33 125
MS.gene056140.t1 MTR_7g052480 26.948 308 171 11 234 493 225 526 1.65e-25 110
MS.gene056140.t1 MTR_7g445600 31.788 151 65 2 342 492 243 355 2.37e-20 92.8
MS.gene056140.t1 MTR_8g078505 29.609 179 112 3 317 495 354 518 8.50e-19 89.7
MS.gene056140.t1 MTR_5g018850 27.273 220 127 5 274 489 1290 1480 4.38e-18 88.6
MS.gene056140.t1 MTR_1g069570 28.249 177 112 4 321 495 558 721 5.72e-17 84.3
MS.gene056140.t1 MTR_8g078490 28.736 174 108 3 324 495 1073 1232 8.73e-16 81.3
MS.gene056140.t1 MTR_4g132610 28.161 174 109 3 324 495 867 1026 9.68e-16 80.9
MS.gene056140.t1 MTR_5g098680 32.484 157 86 4 108 251 267 416 3.07e-14 75.9
MS.gene056140.t1 MTR_7g098390 27.273 176 113 4 321 494 514 676 8.48e-14 74.3
MS.gene056140.t1 MTR_1g069570 31.061 132 77 3 321 451 558 676 3.25e-13 72.4
MS.gene056140.t1 MTR_4g131630 61.538 52 17 1 439 490 1 49 2.11e-12 62.4
MS.gene056140.t1 MTR_8g102580 30.573 157 89 4 108 251 261 410 5.54e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056140.t1 AT4G13460 47.575 536 208 10 27 494 108 638 8.85e-158 463
MS.gene056140.t1 AT4G13460 47.575 536 208 10 27 494 108 638 8.85e-158 463
MS.gene056140.t1 AT2G33290 44.942 514 213 10 45 494 132 639 9.85e-143 425
MS.gene056140.t1 AT2G33290 44.942 514 213 10 45 494 132 639 9.85e-143 425
MS.gene056140.t1 AT2G33290 44.942 514 213 10 45 494 132 639 9.85e-143 425
MS.gene056140.t1 AT2G33290 44.942 514 213 10 45 494 132 639 9.85e-143 425
MS.gene056140.t1 AT5G04940 33.468 496 259 12 60 494 155 640 1.50e-77 256
MS.gene056140.t1 AT5G04940 33.468 496 259 12 60 494 155 640 1.50e-77 256
MS.gene056140.t1 AT1G73100 36.607 448 223 12 98 494 202 639 9.56e-77 254
MS.gene056140.t1 AT2G35160 32.558 516 246 13 39 492 252 727 9.56e-74 248
MS.gene056140.t1 AT2G22740 33.836 464 231 11 85 492 316 759 9.91e-74 248
MS.gene056140.t1 AT2G22740 33.836 464 231 11 85 492 316 759 9.91e-74 248
MS.gene056140.t1 AT2G35160 32.558 516 246 13 39 492 288 763 1.88e-73 248
MS.gene056140.t1 AT2G35160 32.558 516 246 13 39 492 288 763 1.88e-73 248
MS.gene056140.t1 AT2G35160 32.558 516 246 13 39 492 288 763 1.88e-73 248
MS.gene056140.t1 AT2G35160 32.558 516 246 13 39 492 288 763 1.88e-73 248
MS.gene056140.t1 AT2G24740 32.609 552 280 15 18 494 190 724 4.57e-70 238
MS.gene056140.t1 AT5G13960 32.059 471 240 17 91 493 2 460 1.70e-66 222
MS.gene056140.t1 AT5G13960 30.989 526 282 19 35 493 83 594 3.61e-66 225
MS.gene056140.t1 AT1G17770 30.427 539 298 15 16 496 144 663 7.14e-66 225
MS.gene056140.t1 AT5G47150 36.486 222 108 7 53 250 112 324 9.98e-32 124
MS.gene056140.t1 AT5G47160 37.267 161 84 5 97 247 255 408 1.81e-22 100
MS.gene056140.t1 AT5G47160 37.267 161 84 5 97 247 255 408 1.81e-22 100
MS.gene056140.t1 AT5G47160 37.267 161 84 5 97 247 255 408 1.81e-22 100
MS.gene056140.t1 AT2G23740 32.000 175 95 3 325 493 1193 1349 2.33e-22 101
MS.gene056140.t1 AT2G23740 32.000 175 95 3 325 493 1200 1356 2.35e-22 101
MS.gene056140.t1 AT2G23740 32.000 175 95 3 325 493 1200 1356 2.35e-22 101
MS.gene056140.t1 AT2G23740 32.000 175 95 3 325 493 1200 1356 2.35e-22 101
MS.gene056140.t1 AT3G03750 32.335 167 101 3 327 493 169 323 4.72e-18 85.9
MS.gene056140.t1 AT2G05900 37.572 173 92 9 145 308 26 191 2.08e-17 83.6
MS.gene056140.t1 AT2G23740 34.586 133 63 3 325 451 1200 1314 3.14e-17 85.9
MS.gene056140.t1 AT2G23740 34.586 133 63 3 325 451 1200 1314 3.14e-17 85.9
MS.gene056140.t1 AT1G57820 31.013 158 88 5 108 251 277 427 1.81e-12 70.1
MS.gene056140.t1 AT1G57820 31.013 158 88 5 108 251 277 427 1.81e-12 70.1
MS.gene056140.t1 AT1G57820 31.613 155 88 6 108 251 277 424 3.30e-12 69.3
MS.gene056140.t1 AT5G39550 30.178 169 97 6 97 251 251 412 3.12e-11 66.2

Find 117 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTTTGATCATGGTAAT+TGG 0.179510 7.3:+54551774 MS.gene056140:CDS
AGTGAATGTTGGTTTGAAAA+AGG 0.258242 7.3:+54550946 MS.gene056140:CDS
GATTCGTGTGTCGGGTTTGC+TGG 0.262976 7.3:+54549717 MS.gene056140:CDS
ACATAGGATTATCACATAAT+TGG 0.283098 7.3:-54551071 None:intergenic
TTGGATGTTTCCCCATCTTA+TGG 0.286358 7.3:+54551793 MS.gene056140:CDS
ATATTGCGCACCATCGTTAC+AGG 0.312583 7.3:+54549529 MS.gene056140:CDS
AGGATCATACTACCCATCTT+AGG 0.317543 7.3:-54551021 None:intergenic
TTGGCCTCTCTTAAGCATAT+TGG 0.319702 7.3:-54551052 None:intergenic
TGTAACGATGGTGCGCAATA+TGG 0.348160 7.3:-54549527 None:intergenic
AGAAACCGCGTGACACAAAA+AGG 0.356829 7.3:+54551404 MS.gene056140:CDS
CATGCTAGTATGAGTTCTAA+TGG 0.360661 7.3:+54550682 MS.gene056140:CDS
ATGAAACTAGTTGGGGAGTT+AGG 0.362684 7.3:+54551459 MS.gene056140:CDS
TATTATTCACTTCTTCTGTC+TGG 0.364776 7.3:-54549795 None:intergenic
AAATCTAAGCAGAAGCTTAG+AGG 0.376549 7.3:+54549604 MS.gene056140:CDS
ACTAATTGAACAAACACATT+TGG 0.377806 7.3:-54551752 None:intergenic
TAGATCTAATGAAACTAGTT+GGG 0.379002 7.3:+54551451 MS.gene056140:CDS
ATAAAAGTTCCAGCTAGAAT+AGG 0.380021 7.3:-54551491 None:intergenic
AACATTGGAAATGCCGCCTT+CGG 0.382051 7.3:-54551195 None:intergenic
TCCAATGGGAAGGAGAATAT+TGG 0.382212 7.3:+54551114 MS.gene056140:CDS
TAAGCATATTGGCTTCCTTA+AGG 0.394112 7.3:-54551041 None:intergenic
TGCGAAGGACAACTACAAAA+AGG 0.399229 7.3:-54551377 None:intergenic
CAATTAGTTCTCTTTGATCA+TGG 0.411850 7.3:+54551767 MS.gene056140:CDS
TTTATAAGTTTATGTTATCA+AGG 0.412998 7.3:+54550986 MS.gene056140:CDS
GTTTGATTCGATTCGTGTGT+CGG 0.415574 7.3:+54549708 MS.gene056140:CDS
TAGTTGGGGAGTTAGGTCTT+TGG 0.420703 7.3:+54551466 MS.gene056140:CDS
CTTGATCATGGGGTAGAAGC+TGG 0.421865 7.3:+54551857 MS.gene056140:CDS
TAAAAGTTCCAGCTAGAATA+GGG 0.427435 7.3:-54551490 None:intergenic
CCAGTTCCTGGTGTTTGCAT+TGG 0.427828 7.3:+54550583 MS.gene056140:intron
GTGCGCAATATGGAAGGGTT+TGG 0.428940 7.3:-54549517 None:intergenic
GAACAAACACATTTGGAGTT+GGG 0.430179 7.3:-54551745 None:intergenic
CCATTGCAAATACCATAAGA+TGG 0.432457 7.3:-54551805 None:intergenic
ACATTGGAAATGCCGCCTTC+GGG 0.434321 7.3:-54551194 None:intergenic
GTCCGTATCGTGAGATGGTC+CGG 0.436727 7.3:+54549671 MS.gene056140:CDS
TGTATAAGATAAGTGAATGT+TGG 0.437441 7.3:+54550935 MS.gene056140:CDS
GGTTCAAGGTCAACCTAAGA+TGG 0.443665 7.3:+54551008 MS.gene056140:CDS
CAAACAAAATTCTTGTTCTC+CGG 0.445353 7.3:-54549690 None:intergenic
TTAGATCTAATGAAACTAGT+TGG 0.450265 7.3:+54551450 MS.gene056140:CDS
TGCAATATGAGATTGATGTC+AGG 0.456152 7.3:+54550845 MS.gene056140:CDS
GATGGGTAGTATGATCCTTA+AGG 0.457082 7.3:+54551026 MS.gene056140:CDS
CCATCTTATGGTATTTGCAA+TGG 0.459327 7.3:+54551805 MS.gene056140:CDS
TTTGATTCGATTCGTGTGTC+GGG 0.459511 7.3:+54549709 MS.gene056140:CDS
ACTAGTGTGGTTGTGTCTGA+TGG 0.461191 7.3:+54550718 MS.gene056140:CDS
TGAACAAACACATTTGGAGT+TGG 0.468046 7.3:-54551746 None:intergenic
CTTTCTGATGATATTTCCAA+TGG 0.469201 7.3:+54551099 MS.gene056140:CDS
CATTGCAAATACCATAAGAT+GGG 0.474185 7.3:-54551804 None:intergenic
AGAAGTGAAATGTGTGTGAT+TGG 0.479419 7.3:+54550622 MS.gene056140:CDS
ACCAATATTCTCCTTCCCAT+TGG 0.482976 7.3:-54551115 None:intergenic
CTCCCTAGTCAAAACAAGTC+CGG 0.496317 7.3:-54551525 None:intergenic
AATCTAAGCAGAAGCTTAGA+GGG 0.504640 7.3:+54549605 MS.gene056140:CDS
TGGTACCTCTACTACTAGTA+AGG 0.505090 7.3:+54550894 MS.gene056140:CDS
AAAAGGTATTAAATATAGGT+TGG 0.507633 7.3:+54551421 MS.gene056140:CDS
TCAAGACTAAGCTCTCTCAT+TGG 0.507939 7.3:-54551839 None:intergenic
CTCGTCGGGACCTGTAACGA+TGG 0.515602 7.3:-54549539 None:intergenic
GAATAGGTCTACTCAAGCAT+GGG 0.515918 7.3:+54551613 MS.gene056140:CDS
TCTTTGGACCCTATTCTAGC+TGG 0.516120 7.3:+54551482 MS.gene056140:CDS
CACAACCACACTAGTAGCAA+TGG 0.516405 7.3:-54550710 None:intergenic
TTTATGTTATCAAGGGTTCA+AGG 0.516545 7.3:+54550994 MS.gene056140:CDS
AAATCTAAAGTAGGATATGC+GGG 0.520737 7.3:-54551671 None:intergenic
AGAGAGCTTAGTCTTGATCA+TGG 0.523319 7.3:+54551845 MS.gene056140:CDS
AGAGTTATGTTCACCATCCA+TGG 0.526426 7.3:-54551564 None:intergenic
TGAATAGGTCTACTCAAGCA+TGG 0.528538 7.3:+54551612 MS.gene056140:CDS
TGATGATATTTCCAATGGGA+AGG 0.528993 7.3:+54551104 MS.gene056140:CDS
GAGAGCTTAGTCTTGATCAT+GGG 0.530152 7.3:+54551846 MS.gene056140:CDS
AGACTAAGCTCTCTCATTGG+AGG 0.531678 7.3:-54551836 None:intergenic
TACATGGTCAACCACAAGCT+GGG 0.533174 7.3:+54550647 MS.gene056140:CDS
ATTGATGTCAGGGTTATTCG+AGG 0.539804 7.3:+54550856 MS.gene056140:CDS
ACAACCACACTAGTAGCAAT+GGG 0.546031 7.3:-54550709 None:intergenic
TATGAAGCAGGATCAGAAGT+TGG 0.550833 7.3:+54550792 MS.gene056140:CDS
TGGGCTATGACTAATATAGC+TGG 0.552213 7.3:-54551726 None:intergenic
TGTTCACACTGCGATGGATG+CGG 0.556445 7.3:+54549642 MS.gene056140:CDS
TCCAATGCAAAATCTAAAGT+AGG 0.560604 7.3:-54551680 None:intergenic
TGGCCATGGTGATATGAAGC+AGG 0.562913 7.3:+54550780 MS.gene056140:CDS
ACGATGGTGCGCAATATGGA+AGG 0.563091 7.3:-54549523 None:intergenic
TTGATCATGGGGTAGAAGCT+GGG 0.563836 7.3:+54551858 MS.gene056140:CDS
ATGTGTGTGATTGGTTTACA+TGG 0.563933 7.3:+54550631 MS.gene056140:CDS
CTCCGGACCATCTCACGATA+CGG 0.564668 7.3:-54549673 None:intergenic
TTACATGGTCAACCACAAGC+TGG 0.564688 7.3:+54550646 MS.gene056140:CDS
TCATCAGAAAGGACATACAT+AGG 0.567324 7.3:-54551087 None:intergenic
CTTTGTGGAAGCAAGAACAT+TGG 0.569590 7.3:-54551210 None:intergenic
CATTGGAAATATCATCAGAA+AGG 0.571115 7.3:-54551098 None:intergenic
GGAACGAGGCAACCTTGCTA+TGG 0.574021 7.3:+54550813 MS.gene056140:CDS
CCACACTAGTAGCAATGGGC+TGG 0.574305 7.3:-54550705 None:intergenic
TTTCTGATGATATTTCCAAT+GGG 0.576995 7.3:+54551100 MS.gene056140:CDS
GGAGACTCTATTATCTACTC+TGG 0.577576 7.3:+54550760 MS.gene056140:CDS
GCAATATGAGATTGATGTCA+GGG 0.582106 7.3:+54550846 MS.gene056140:CDS
GGATATAATGATGATGATCA+AGG 0.586899 7.3:+54550739 MS.gene056140:CDS
TTATAAGTTTATGTTATCAA+GGG 0.591362 7.3:+54550987 MS.gene056140:CDS
TACGACAACAACACTCTGGA+GGG 0.592378 7.3:+54549571 MS.gene056140:CDS
GACTAAGCTCTCTCATTGGA+GGG 0.593113 7.3:-54551835 None:intergenic
TCACCGTCCGTATCGTGAGA+TGG 0.597910 7.3:+54549666 MS.gene056140:CDS
GCATACTTGTCACCATAGCA+AGG 0.603748 7.3:-54550825 None:intergenic
AAATTACGACAACAACACTC+TGG 0.605531 7.3:+54549567 MS.gene056140:CDS
GGGAGATACTCAAATTGCAT+AGG 0.607274 7.3:-54551174 None:intergenic
AAAATCTAAAGTAGGATATG+CGG 0.609459 7.3:-54551672 None:intergenic
GTTCAAGGTCAACCTAAGAT+GGG 0.609539 7.3:+54551009 MS.gene056140:CDS
GGAGCTTGTTCACACTGCGA+TGG 0.614223 7.3:+54549636 MS.gene056140:CDS
AGATCTAATGAAACTAGTTG+GGG 0.616648 7.3:+54551452 MS.gene056140:CDS
TCTATTATCTACTCTGGCCA+TGG 0.620402 7.3:+54550766 MS.gene056140:CDS
GAAGCTTAGAGGGCAGAACA+AGG 0.621471 7.3:+54549615 MS.gene056140:CDS
ACGCGGTTTCTGCAATGCGA+AGG 0.628139 7.3:-54551392 None:intergenic
TTACGACAACAACACTCTGG+AGG 0.638594 7.3:+54549570 MS.gene056140:CDS
AGAGCTTAGTCTTGATCATG+GGG 0.638779 7.3:+54551847 MS.gene056140:CDS
CATTGGATGTATCAACGATG+AGG 0.644772 7.3:+54551696 MS.gene056140:CDS
AAATAATCAATCCCAGCTTG+TGG 0.645273 7.3:-54550658 None:intergenic
ATTGCAAATACCATAAGATG+GGG 0.649831 7.3:-54551803 None:intergenic
CCAGCCCATTGCTACTAGTG+TGG 0.654306 7.3:+54550705 MS.gene056140:CDS
CGATGGTGCGCAATATGGAA+GGG 0.656778 7.3:-54549522 None:intergenic
GAAGCCAATATGCTTAAGAG+AGG 0.661393 7.3:+54551048 MS.gene056140:CDS
ATATCACCAATGCAAACACC+AGG 0.662349 7.3:-54550589 None:intergenic
GGAAGGAGAATATTGGTGTG+AGG 0.669233 7.3:+54551121 MS.gene056140:CDS
GCAATTTGAGTATCTCCCGA+AGG 0.676490 7.3:+54551179 MS.gene056140:CDS
CAGGATCAGAAGTTGGAACG+AGG 0.676511 7.3:+54550799 MS.gene056140:CDS
AATAGGTCTACTCAAGCATG+GGG 0.684847 7.3:+54551614 MS.gene056140:CDS
GATCCTGCTTCATATCACCA+TGG 0.685147 7.3:-54550783 None:intergenic
GGACCATCTCACGATACGGA+CGG 0.685403 7.3:-54549669 None:intergenic
ATTTGAGTATCTCCCGAAGG+CGG 0.692509 7.3:+54551182 MS.gene056140:CDS
AGGTCGTTGATTTATGAATG+CGG 0.693955 7.3:+54551353 MS.gene056140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTATATGATAAAATATT+AGG - chr7.3:54550238-54550257 None:intergenic 10.0%
!! TTATAAGTTTATGTTATCAA+GGG + chr7.3:54550987-54551006 MS.gene056140:CDS 15.0%
!! TTTATAAGTTTATGTTATCA+AGG + chr7.3:54550986-54551005 MS.gene056140:CDS 15.0%
!! AGTAATATTCATTATTCTTG+CGG - chr7.3:54550011-54550030 None:intergenic 20.0%
!!! AAAAGGTATTAAATATAGGT+TGG + chr7.3:54551421-54551440 MS.gene056140:CDS 20.0%
!!! AATTTTACCTATTTTGACAT+AGG + chr7.3:54550207-54550226 MS.gene056140:intron 20.0%
!!! ACTTGTTACAAAATAAACAT+AGG - chr7.3:54550275-54550294 None:intergenic 20.0%
!!! ATGTTTATTTTGTAACAAGT+TGG + chr7.3:54550275-54550294 MS.gene056140:intron 20.0%
!!! CACAAAAAGGTATTAAATAT+AGG + chr7.3:54551417-54551436 MS.gene056140:CDS 20.0%
! AACCAAAAGAGATTATTCTT+GGG - chr7.3:54550061-54550080 None:intergenic 25.0%
! ACATAGGATTATCACATAAT+TGG - chr7.3:54551074-54551093 None:intergenic 25.0%
! ACTAATTGAACAAACACATT+TGG - chr7.3:54551755-54551774 None:intergenic 25.0%
! AGAAGAAGTGAATAATAGTA+GGG + chr7.3:54549801-54549820 MS.gene056140:intron 25.0%
! ATAAGCATGAAACAAATTAC+CGG - chr7.3:54550177-54550196 None:intergenic 25.0%
! ATGAATTGAAAGAGATGAAA+AGG - chr7.3:54550124-54550143 None:intergenic 25.0%
! TAGATCTAATGAAACTAGTT+GGG + chr7.3:54551451-54551470 MS.gene056140:CDS 25.0%
! TATCATGATGTGAAAATCAT+TGG + chr7.3:54550559-54550578 MS.gene056140:intron 25.0%
! TATGTTTCTTCAATCATGAA+TGG + chr7.3:54551287-54551306 MS.gene056140:intron 25.0%
! TATTCTTGGGTTATGTAATT+GGG - chr7.3:54550048-54550067 None:intergenic 25.0%
! TGTATAAGATAAGTGAATGT+TGG + chr7.3:54550935-54550954 MS.gene056140:CDS 25.0%
! TTAGATCTAATGAAACTAGT+TGG + chr7.3:54551450-54551469 MS.gene056140:CDS 25.0%
! TTATTCTTGGGTTATGTAAT+TGG - chr7.3:54550049-54550068 None:intergenic 25.0%
! TTTCTGATGATATTTCCAAT+GGG + chr7.3:54551100-54551119 MS.gene056140:CDS 25.0%
!! AAAATCTAAAGTAGGATATG+CGG - chr7.3:54551675-54551694 None:intergenic 25.0%
!!! AGTAAGGTTTTTGTTTATGA+TGG + chr7.3:54550910-54550929 MS.gene056140:CDS 25.0%
!!! ATCCAAATCGATTTTTGAAT+AGG + chr7.3:54551597-54551616 MS.gene056140:CDS 25.0%
AAAAACCTTACTAGTAGTAG+AGG - chr7.3:54550902-54550921 None:intergenic 30.0%
AGATAAAAAAACATGCGGTT+TGG - chr7.3:54550426-54550445 None:intergenic 30.0%
AGATCTAATGAAACTAGTTG+GGG + chr7.3:54551452-54551471 MS.gene056140:CDS 30.0%
ATAAAAGTTCCAGCTAGAAT+AGG - chr7.3:54551494-54551513 None:intergenic 30.0%
ATTGCAAATACCATAAGATG+GGG - chr7.3:54551806-54551825 None:intergenic 30.0%
CAAACAAAATTCTTGTTCTC+CGG - chr7.3:54549693-54549712 None:intergenic 30.0%
CAGAAGAAGTGAATAATAGT+AGG + chr7.3:54549800-54549819 MS.gene056140:intron 30.0%
CATTGCAAATACCATAAGAT+GGG - chr7.3:54551807-54551826 None:intergenic 30.0%
CATTGGAAATATCATCAGAA+AGG - chr7.3:54551101-54551120 None:intergenic 30.0%
CTTTCTGATGATATTTCCAA+TGG + chr7.3:54551099-54551118 MS.gene056140:CDS 30.0%
GAACCAAAAGAGATTATTCT+TGG - chr7.3:54550062-54550081 None:intergenic 30.0%
GACCTATTCAAAAATCGATT+TGG - chr7.3:54551602-54551621 None:intergenic 30.0%
GGTAAAACCTATGTCAAAAT+AGG - chr7.3:54550217-54550236 None:intergenic 30.0%
TAAAAGTTCCAGCTAGAATA+GGG - chr7.3:54551493-54551512 None:intergenic 30.0%
TAAGCATGAAACAAATTACC+GGG - chr7.3:54550176-54550195 None:intergenic 30.0%
TATTATTCACTTCTTCTGTC+TGG - chr7.3:54549798-54549817 None:intergenic 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr7.3:54550006-54550025 None:intergenic 30.0%
TTCTCTTTGATCATGGTAAT+TGG + chr7.3:54551774-54551793 MS.gene056140:CDS 30.0%
TTTATGTTATCAAGGGTTCA+AGG + chr7.3:54550994-54551013 MS.gene056140:CDS 30.0%
! AAAAGTGGGATTCTTTTGAA+AGG + chr7.3:54551329-54551348 MS.gene056140:intron 30.0%
! AAATCTAAAGTAGGATATGC+GGG - chr7.3:54551674-54551693 None:intergenic 30.0%
! AACCCAAGAATAATCTCTTT+TGG + chr7.3:54550056-54550075 MS.gene056140:intron 30.0%
! ACTTTTATATGTGAGTTCAC+CGG + chr7.3:54551506-54551525 MS.gene056140:CDS 30.0%
! CAATTAGTTCTCTTTGATCA+TGG + chr7.3:54551767-54551786 MS.gene056140:CDS 30.0%
! GGATATAATGATGATGATCA+AGG + chr7.3:54550739-54550758 MS.gene056140:CDS 30.0%
! GGTTTGAAAAAGGTATATCT+GGG + chr7.3:54550956-54550975 MS.gene056140:CDS 30.0%
! TCCAATGCAAAATCTAAAGT+AGG - chr7.3:54551683-54551702 None:intergenic 30.0%
! TCCTACTTTAGATTTTGCAT+TGG + chr7.3:54551679-54551698 MS.gene056140:CDS 30.0%
! TGGTTTGAAAAAGGTATATC+TGG + chr7.3:54550955-54550974 MS.gene056140:CDS 30.0%
! TTTTTCATTGTTTCACCATC+AGG + chr7.3:54550085-54550104 MS.gene056140:intron 30.0%
!! AAAGTGGGATTCTTTTGAAA+GGG + chr7.3:54551330-54551349 MS.gene056140:intron 30.0%
!! AATCCCACTTTTACTATAAG+GGG - chr7.3:54551321-54551340 None:intergenic 30.0%
!! AATTTGTTTCCTTTTCTTCC+CGG + chr7.3:54550155-54550174 MS.gene056140:intron 30.0%
!! AGAATCCCACTTTTACTATA+AGG - chr7.3:54551323-54551342 None:intergenic 30.0%
!! AGTGAATGTTGGTTTGAAAA+AGG + chr7.3:54550946-54550965 MS.gene056140:CDS 30.0%
!! GAATCCCACTTTTACTATAA+GGG - chr7.3:54551322-54551341 None:intergenic 30.0%
AAATAATCAATCCCAGCTTG+TGG - chr7.3:54550661-54550680 None:intergenic 35.0%
AAATCTAAGCAGAAGCTTAG+AGG + chr7.3:54549604-54549623 MS.gene056140:CDS 35.0%
AAATTACGACAACAACACTC+TGG + chr7.3:54549567-54549586 MS.gene056140:CDS 35.0%
AACAAATTACCGGGAAGAAA+AGG - chr7.3:54550167-54550186 None:intergenic 35.0%
AATCAAGTCATTTCGGACTA+GGG - chr7.3:54550503-54550522 None:intergenic 35.0%
AATCTAAGCAGAAGCTTAGA+GGG + chr7.3:54549605-54549624 MS.gene056140:CDS 35.0%
ACTACCCCTTATAGTAAAAG+TGG + chr7.3:54551314-54551333 MS.gene056140:intron 35.0%
AGAAGTGAAATGTGTGTGAT+TGG + chr7.3:54550622-54550641 MS.gene056140:CDS 35.0%
ATAATAGTAGGGTCCGAAAT+AGG + chr7.3:54549812-54549831 MS.gene056140:intron 35.0%
CCATCTTATGGTATTTGCAA+TGG + chr7.3:54551805-54551824 MS.gene056140:CDS 35.0%
CCATTGCAAATACCATAAGA+TGG - chr7.3:54551808-54551827 None:intergenic 35.0%
CTACCCCTTATAGTAAAAGT+GGG + chr7.3:54551315-54551334 MS.gene056140:intron 35.0%
GCAATATGAGATTGATGTCA+GGG + chr7.3:54550846-54550865 MS.gene056140:CDS 35.0%
GGAATTAAAATCGAACCTGA+TGG - chr7.3:54550103-54550122 None:intergenic 35.0%
TAATAGTAGGGTCCGAAATA+GGG + chr7.3:54549813-54549832 MS.gene056140:intron 35.0%
TAGCAGCAATCAAGTCATTT+CGG - chr7.3:54550510-54550529 None:intergenic 35.0%
TCATCAGAAAGGACATACAT+AGG - chr7.3:54551090-54551109 None:intergenic 35.0%
TGATGATATTTCCAATGGGA+AGG + chr7.3:54551104-54551123 MS.gene056140:CDS 35.0%
TGCAATATGAGATTGATGTC+AGG + chr7.3:54550845-54550864 MS.gene056140:CDS 35.0%
! CATGCTAGTATGAGTTCTAA+TGG + chr7.3:54550682-54550701 MS.gene056140:CDS 35.0%
! GAAAAAGGTATATCTGGGTT+TGG + chr7.3:54550961-54550980 MS.gene056140:CDS 35.0%
! GAACAAACACATTTGGAGTT+GGG - chr7.3:54551748-54551767 None:intergenic 35.0%
! GTCGTAATTTTGTAACTCGT+CGG - chr7.3:54549557-54549576 None:intergenic 35.0%
! TAATACCTTTTTGTGTCACG+CGG - chr7.3:54551412-54551431 None:intergenic 35.0%
! TCGTAATTTTGTAACTCGTC+GGG - chr7.3:54549556-54549575 None:intergenic 35.0%
! TGAACAAACACATTTGGAGT+TGG - chr7.3:54551749-54551768 None:intergenic 35.0%
!! AAAAAACATGCGGTTTGGTT+TGG - chr7.3:54550421-54550440 None:intergenic 35.0%
!! AGGTCGTTGATTTATGAATG+CGG + chr7.3:54551353-54551372 MS.gene056140:CDS 35.0%
!! ATGTGTGTGATTGGTTTACA+TGG + chr7.3:54550631-54550650 MS.gene056140:CDS 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr7.3:54550001-54550020 None:intergenic 35.0%
!! TAAGCATATTGGCTTCCTTA+AGG - chr7.3:54551044-54551063 None:intergenic 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr7.3:54549858-54549877 None:intergenic 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr7.3:54549849-54549868 None:intergenic 35.0%
!!! TGTTTTTTTATCTCGCGGTT+TGG + chr7.3:54550433-54550452 MS.gene056140:intron 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr7.3:54549859-54549878 None:intergenic 35.0%
AAAATCATTGGTCCAGTTCC+TGG + chr7.3:54550571-54550590 MS.gene056140:intron 40.0%
AAACTGCAAAAAACCGCACT+TGG + chr7.3:54549893-54549912 MS.gene056140:intron 40.0%
AATAGGTCTACTCAAGCATG+GGG + chr7.3:54551614-54551633 MS.gene056140:CDS 40.0%
AATAGTAGGGTCCGAAATAG+GGG + chr7.3:54549814-54549833 MS.gene056140:intron 40.0%
ACAACCACACTAGTAGCAAT+GGG - chr7.3:54550712-54550731 None:intergenic 40.0%
ACCAATATTCTCCTTCCCAT+TGG - chr7.3:54551118-54551137 None:intergenic 40.0%
AGAGTTATGTTCACCATCCA+TGG - chr7.3:54551567-54551586 None:intergenic 40.0%
AGGATCATACTACCCATCTT+AGG - chr7.3:54551024-54551043 None:intergenic 40.0%
ATATCACCAATGCAAACACC+AGG - chr7.3:54550592-54550611 None:intergenic 40.0%
ATGAAACTAGTTGGGGAGTT+AGG + chr7.3:54551459-54551478 MS.gene056140:CDS 40.0%
ATTGATGTCAGGGTTATTCG+AGG + chr7.3:54550856-54550875 MS.gene056140:CDS 40.0%
CAAACCAAACCAAACCAATG+CGG - chr7.3:54550368-54550387 None:intergenic 40.0%
CAATCAAGTCATTTCGGACT+AGG - chr7.3:54550504-54550523 None:intergenic 40.0%
CATTGGATGTATCAACGATG+AGG + chr7.3:54551696-54551715 MS.gene056140:CDS 40.0%
CCGCGAGATAAAAAAACATG+CGG - chr7.3:54550431-54550450 None:intergenic 40.0%
CTTTGTGGAAGCAAGAACAT+TGG - chr7.3:54551213-54551232 None:intergenic 40.0%
GAAGCCAATATGCTTAAGAG+AGG + chr7.3:54551048-54551067 MS.gene056140:CDS 40.0%
GAATAGGTCTACTCAAGCAT+GGG + chr7.3:54551613-54551632 MS.gene056140:CDS 40.0%
GAATTCATCCAAACCAAGTG+CGG - chr7.3:54549909-54549928 None:intergenic 40.0%
GATGGGTAGTATGATCCTTA+AGG + chr7.3:54551026-54551045 MS.gene056140:CDS 40.0%
GGAGACTCTATTATCTACTC+TGG + chr7.3:54550760-54550779 MS.gene056140:CDS 40.0%
GGGAGATACTCAAATTGCAT+AGG - chr7.3:54551177-54551196 None:intergenic 40.0%
GTTCAAGGTCAACCTAAGAT+GGG + chr7.3:54551009-54551028 MS.gene056140:CDS 40.0%
TATGAAGCAGGATCAGAAGT+TGG + chr7.3:54550792-54550811 MS.gene056140:CDS 40.0%
TCAAGACTAAGCTCTCTCAT+TGG - chr7.3:54551842-54551861 None:intergenic 40.0%
TCCAATGGGAAGGAGAATAT+TGG + chr7.3:54551114-54551133 MS.gene056140:CDS 40.0%
TCTATTATCTACTCTGGCCA+TGG + chr7.3:54550766-54550785 MS.gene056140:CDS 40.0%
TGAATAGGTCTACTCAAGCA+TGG + chr7.3:54551612-54551631 MS.gene056140:CDS 40.0%
TGCGAAGGACAACTACAAAA+AGG - chr7.3:54551380-54551399 None:intergenic 40.0%
TGGGCTATGACTAATATAGC+TGG - chr7.3:54551729-54551748 None:intergenic 40.0%
TGGTACCTCTACTACTAGTA+AGG + chr7.3:54550894-54550913 MS.gene056140:CDS 40.0%
TTGGATGTTTCCCCATCTTA+TGG + chr7.3:54551793-54551812 MS.gene056140:CDS 40.0%
TTGGCCTCTCTTAAGCATAT+TGG - chr7.3:54551055-54551074 None:intergenic 40.0%
! ATCAAGTCATTTCGGACTAG+GGG - chr7.3:54550502-54550521 None:intergenic 40.0%
! ATTCGAGGTTTTCGGTATGA+AGG + chr7.3:54550871-54550890 MS.gene056140:CDS 40.0%
! GCTACTTTGATGAACGATCA+TGG + chr7.3:54550526-54550545 MS.gene056140:intron 40.0%
! GTTTGATTCGATTCGTGTGT+CGG + chr7.3:54549708-54549727 MS.gene056140:CDS 40.0%
! TCAGGGTTATTCGAGGTTTT+CGG + chr7.3:54550863-54550882 MS.gene056140:CDS 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr7.3:54549854-54549873 None:intergenic 40.0%
! TTTGATTCGATTCGTGTGTC+GGG + chr7.3:54549709-54549728 MS.gene056140:CDS 40.0%
!! AGAGAGCTTAGTCTTGATCA+TGG + chr7.3:54551845-54551864 MS.gene056140:CDS 40.0%
!! AGAGCTTAGTCTTGATCATG+GGG + chr7.3:54551847-54551866 MS.gene056140:CDS 40.0%
!! GAGAGCTTAGTCTTGATCAT+GGG + chr7.3:54551846-54551865 MS.gene056140:CDS 40.0%
!! GCAAGCAGAAATTTTGACCA+TGG + chr7.3:54551547-54551566 MS.gene056140:CDS 40.0%
!! GCACTTGGTTTGGATGAATT+CGG + chr7.3:54549908-54549927 MS.gene056140:intron 40.0%
!! GCAGAAATTTTGACCATGGA+TGG + chr7.3:54551551-54551570 MS.gene056140:CDS 40.0%
!! TGGTTTGGTTTGGTTTGGTT+TGG + chr7.3:54550371-54550390 MS.gene056140:intron 40.0%
!! TTGCAGTTTCGGTTTGGATT+GGG - chr7.3:54549882-54549901 None:intergenic 40.0%
!! TTGGATTGGTTCGGTTTAAG+CGG - chr7.3:54550344-54550363 None:intergenic 40.0%
!! TTTGCAGTTTCGGTTTGGAT+TGG - chr7.3:54549883-54549902 None:intergenic 40.0%
!!! AGTGCGGTTTTTTGCAGTTT+CGG - chr7.3:54549893-54549912 None:intergenic 40.0%
!!! CCGCATGTTTTTTTATCTCG+CGG + chr7.3:54550428-54550447 MS.gene056140:intron 40.0%
!!! GGTTTTGAACACCCCTATTT+CGG - chr7.3:54549828-54549847 None:intergenic 40.0%
!!! GGTTTTTTGCAGTTTCGGTT+TGG - chr7.3:54549888-54549907 None:intergenic 40.0%
AACATTGGAAATGCCGCCTT+CGG - chr7.3:54551198-54551217 None:intergenic 45.0%
ACTAGTGTGGTTGTGTCTGA+TGG + chr7.3:54550718-54550737 MS.gene056140:CDS 45.0%
AGAAACCGCGTGACACAAAA+AGG + chr7.3:54551404-54551423 MS.gene056140:CDS 45.0%
AGACTAAGCTCTCTCATTGG+AGG - chr7.3:54551839-54551858 None:intergenic 45.0%
ATATTGCGCACCATCGTTAC+AGG + chr7.3:54549529-54549548 MS.gene056140:CDS 45.0%
ATTTGAGTATCTCCCGAAGG+CGG + chr7.3:54551182-54551201 MS.gene056140:CDS 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr7.3:54550363-54550382 None:intergenic 45.0%
CACAACCACACTAGTAGCAA+TGG - chr7.3:54550713-54550732 None:intergenic 45.0%
CTCCCTAGTCAAAACAAGTC+CGG - chr7.3:54551528-54551547 None:intergenic 45.0%
GACTAAGCTCTCTCATTGGA+GGG - chr7.3:54551838-54551857 None:intergenic 45.0%
GATCCTGCTTCATATCACCA+TGG - chr7.3:54550786-54550805 None:intergenic 45.0%
GCAAAAAACCGCACTTGGTT+TGG + chr7.3:54549898-54549917 MS.gene056140:intron 45.0%
GCAATTTGAGTATCTCCCGA+AGG + chr7.3:54551179-54551198 MS.gene056140:CDS 45.0%
GCATACTTGTCACCATAGCA+AGG - chr7.3:54550828-54550847 None:intergenic 45.0%
GGAAGGAGAATATTGGTGTG+AGG + chr7.3:54551121-54551140 MS.gene056140:CDS 45.0%
GGTTCAAGGTCAACCTAAGA+TGG + chr7.3:54551008-54551027 MS.gene056140:CDS 45.0%
TACATGGTCAACCACAAGCT+GGG + chr7.3:54550647-54550666 MS.gene056140:CDS 45.0%
TACGACAACAACACTCTGGA+GGG + chr7.3:54549571-54549590 MS.gene056140:CDS 45.0%
TAGTTGGGGAGTTAGGTCTT+TGG + chr7.3:54551466-54551485 MS.gene056140:CDS 45.0%
TCTTTGGACCCTATTCTAGC+TGG + chr7.3:54551482-54551501 MS.gene056140:CDS 45.0%
TGTAACGATGGTGCGCAATA+TGG - chr7.3:54549530-54549549 None:intergenic 45.0%
TTACATGGTCAACCACAAGC+TGG + chr7.3:54550646-54550665 MS.gene056140:CDS 45.0%
TTACGACAACAACACTCTGG+AGG + chr7.3:54549570-54549589 MS.gene056140:CDS 45.0%
TTCCACAAAGTATGACGACG+AGG + chr7.3:54551223-54551242 MS.gene056140:intron 45.0%
TTCCTCGTCGTCATACTTTG+TGG - chr7.3:54551228-54551247 None:intergenic 45.0%
TTGATCATGGGGTAGAAGCT+GGG + chr7.3:54551858-54551877 MS.gene056140:CDS 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr7.3:54550358-54550377 None:intergenic 45.0%
! GAGTGTTCTGAATGCGTTGA+TGG + chr7.3:54551263-54551282 MS.gene056140:intron 45.0%
!! ACATGCGGTTTGGTTTGGTT+CGG - chr7.3:54550416-54550435 None:intergenic 45.0%
!! AGTTTCGGTTTGGATTGGGT+TGG - chr7.3:54549878-54549897 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr7.3:54550361-54550380 MS.gene056140:intron 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr7.3:54550356-54550375 MS.gene056140:intron 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr7.3:54550353-54550372 None:intergenic 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr7.3:54550366-54550385 MS.gene056140:intron 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr7.3:54549991-54550010 None:intergenic 45.0%
!! GTGGGATTCTTTTGAAAGGG+AGG + chr7.3:54551333-54551352 MS.gene056140:intron 45.0%
!! GTTTGGATTGGGTTGGTTTG+CGG - chr7.3:54549871-54549890 None:intergenic 45.0%
!! TCTTGCGGTTTGGTTTGGTT+TGG - chr7.3:54549996-54550015 None:intergenic 45.0%
!!! CACCGGACTTGTTTTGACTA+GGG + chr7.3:54551523-54551542 MS.gene056140:CDS 45.0%
!!! TCACCGGACTTGTTTTGACT+AGG + chr7.3:54551522-54551541 MS.gene056140:CDS 45.0%
ACATTGGAAATGCCGCCTTC+GGG - chr7.3:54551197-54551216 None:intergenic 50.0%
ACGATGGTGCGCAATATGGA+AGG - chr7.3:54549526-54549545 None:intergenic 50.0%
CAGGATCAGAAGTTGGAACG+AGG + chr7.3:54550799-54550818 MS.gene056140:CDS 50.0%
CCAATGCAAACACCAGGAAC+TGG - chr7.3:54550586-54550605 None:intergenic 50.0%
CCAGTTCCTGGTGTTTGCAT+TGG + chr7.3:54550583-54550602 MS.gene056140:intron 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr7.3:54550351-54550370 MS.gene056140:intron 50.0%
CGATGGTGCGCAATATGGAA+GGG - chr7.3:54549525-54549544 None:intergenic 50.0%
CTTGATCATGGGGTAGAAGC+TGG + chr7.3:54551857-54551876 MS.gene056140:CDS 50.0%
GAAGCTTAGAGGGCAGAACA+AGG + chr7.3:54549615-54549634 MS.gene056140:CDS 50.0%
GTGCGCAATATGGAAGGGTT+TGG - chr7.3:54549520-54549539 None:intergenic 50.0%
TGGCCATGGTGATATGAAGC+AGG + chr7.3:54550780-54550799 MS.gene056140:CDS 50.0%
TGTTCACACTGCGATGGATG+CGG + chr7.3:54549642-54549661 MS.gene056140:CDS 50.0%
! CGAGGTTTTCGGTATGAAGG+TGG + chr7.3:54550874-54550893 MS.gene056140:CDS 50.0%
! GACTTTTGCAATGAACCGCG+CGG + chr7.3:54549933-54549952 MS.gene056140:intron 50.0%
ACGCGGTTTCTGCAATGCGA+AGG - chr7.3:54551395-54551414 None:intergenic 55.0%
CCACACTAGTAGCAATGGGC+TGG - chr7.3:54550708-54550727 None:intergenic 55.0%
CCAGCCCATTGCTACTAGTG+TGG + chr7.3:54550705-54550724 MS.gene056140:CDS 55.0%
CTCCGGACCATCTCACGATA+CGG - chr7.3:54549676-54549695 None:intergenic 55.0%
GATTCGTGTGTCGGGTTTGC+TGG + chr7.3:54549717-54549736 MS.gene056140:CDS 55.0%
GGAACGAGGCAACCTTGCTA+TGG + chr7.3:54550813-54550832 MS.gene056140:CDS 55.0%
GGACCATCTCACGATACGGA+CGG - chr7.3:54549672-54549691 None:intergenic 55.0%
GTCCGTATCGTGAGATGGTC+CGG + chr7.3:54549671-54549690 MS.gene056140:CDS 55.0%
TCACCGTCCGTATCGTGAGA+TGG + chr7.3:54549666-54549685 MS.gene056140:CDS 55.0%
TTGCAATGAACCGCGCGGTT+CGG + chr7.3:54549938-54549957 MS.gene056140:intron 55.0%
! GGAGCTTGTTCACACTGCGA+TGG + chr7.3:54549636-54549655 MS.gene056140:CDS 55.0%
!! TTTCGGACTAGGGGTGTTCG+CGG - chr7.3:54550493-54550512 None:intergenic 55.0%
CTCGTCGGGACCTGTAACGA+TGG - chr7.3:54549542-54549561 None:intergenic 60.0%
!! ATGAACCGCGCGGTTCGGTT+CGG + chr7.3:54549943-54549962 MS.gene056140:intron 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr7.3:54550478-54550497 None:intergenic 60.0%
GCAAACCGAACCGAACCGCG+CGG - chr7.3:54549951-54549970 None:intergenic 65.0%
!! GACTAGGGGTGTTCGCGGTG+CGG - chr7.3:54550488-54550507 None:intergenic 65.0%
!! GCGCGGTTCGGTTCGGTTTG+CGG + chr7.3:54549950-54549969 MS.gene056140:intron 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr7.3:54550483-54550502 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 54549502 54551883 54549502 ID=MS.gene056140
chr7.3 mRNA 54549502 54551883 54549502 ID=MS.gene056140.t1;Parent=MS.gene056140
chr7.3 exon 54549502 54549817 54549502 ID=MS.gene056140.t1.exon1;Parent=MS.gene056140.t1
chr7.3 CDS 54549502 54549817 54549502 ID=cds.MS.gene056140.t1;Parent=MS.gene056140.t1
chr7.3 exon 54550587 54551231 54550587 ID=MS.gene056140.t1.exon2;Parent=MS.gene056140.t1
chr7.3 CDS 54550587 54551231 54550587 ID=cds.MS.gene056140.t1;Parent=MS.gene056140.t1
chr7.3 exon 54551351 54551883 54551351 ID=MS.gene056140.t1.exon3;Parent=MS.gene056140.t1
chr7.3 CDS 54551351 54551883 54551351 ID=cds.MS.gene056140.t1;Parent=MS.gene056140.t1
Gene Sequence

>MS.gene056140

ATGAATTTTCAAGATCCAAACCCTTCCATATTGCGCACCATCGTTACAGGTCCCGACGAGTTACAAAATTACGACAACAACACTCTGGAGGGAAAAGCTTCAAAATCTAAGCAGAAGCTTAGAGGGCAGAACAAGGAGCTTGTTCACACTGCGATGGATGCGGATCACCGTCCGTATCGTGAGATGGTCCGGAGAACAAGAATTTTGTTTGATTCGATTCGTGTGTCGGGTTTGCTGGAAGAAGAGAATAATCGTAAGAACAAGAAGTATTTGAAAGCTTCTTCTTTGATAAACCAGACAGAAGAAGTGAATAATAGTAGGGTCCGAAATAGGGGTGTTCAAAACCGAACCAACCCAATAGAAAAACCGCAAACCAACCCAATCCAAACCGAAACTGCAAAAAACCGCACTTGGTTTGGATGAATTCGGATGACTTTTGCAATGAACCGCGCGGTTCGGTTCGGTTTGCGGTTTGTATCTCAGCAACCGAACCAAACCAAACCAAACCGCAAGAATAATGAATATTACTTAAACATGTACTAGCCCAATTACATAACCCAAGAATAATCTCTTTTGGTTCGATTTTTTCATTGTTTCACCATCAGGTTCGATTTTAATTCCTTTTCATCTCTTTCAATTCATTTTCAGTGATGAATTTGTTTCCTTTTCTTCCCGGTAATTTGTTTCATGCTTATGTTTCTTCTTAATTTTACCTATTTTGACATAGGTTTTACCTAATATTTTATCATATAAACAACAAAATAAAATGTCCTATGTTTATTTTGTAACAAGTTGGCAATATTAGAGTTAATGTAATATTTTTTTTATCTTGCGATAAACCGCTTAAACCGAACCAATCCAAACCGCATTGGTTTGGTTTGGTTTGGTTTGGATGACTTTTTAAAAATCAACCGAACCAAACCAAACCGCATGTTTTTTTATCTCGCGGTTTGGATGACTTTTATGCTCAAAACCGAACCAAACCGCACCGCGAACACCCCTAGTCCGAAATGACTTGATTGCTGCTACTTTGATGAACGATCATGGTATGTATTTGTATCATGATGTGAAAATCATTGGTCCAGTTCCTGGTGTTTGCATTGGTGATATTTTTCTCTATAGAAGTGAAATGTGTGTGATTGGTTTACATGGTCAACCACAAGCTGGGATTGATTATTTACATGCTAGTATGAGTTCTAATGGCCAGCCCATTGCTACTAGTGTGGTTGTGTCTGATGGATATAATGATGATGATCAAGGAGACTCTATTATCTACTCTGGCCATGGTGATATGAAGCAGGATCAGAAGTTGGAACGAGGCAACCTTGCTATGGTGACAAGTATGCAATATGAGATTGATGTCAGGGTTATTCGAGGTTTTCGGTATGAAGGTGGTACCTCTACTACTAGTAAGGTTTTTGTTTATGATGGCTTGTATAAGATAAGTGAATGTTGGTTTGAAAAAGGTATATCTGGGTTTGGTGTTTATAAGTTTATGTTATCAAGGGTTCAAGGTCAACCTAAGATGGGTAGTATGATCCTTAAGGAAGCCAATATGCTTAAGAGAGGCCAATTATGTGATAATCCTATGTATGTCCTTTCTGATGATATTTCCAATGGGAAGGAGAATATTGGTGTGAGGCTATATAATGACATTGATAGTGATCTCTATCCTATGCAATTTGAGTATCTCCCGAAGGCGGCATTTCCAATGTTCTTGCTTCCACAAAGTATGACGACGAGGAAAAAATGAGAGCGATAGAGTGTTCTGAATGCGTTGATGGATATGTTTCTTCAATCATGAATGGAAACACTACCCCTTATAGTAAAAGTGGGATTCTTTTGAAAGGGAGGTCGTTGATTTATGAATGCGGTCCTTTTTGTAGTTGTCCTTCGCATTGCAGAAACCGCGTGACACAAAAAGGTATTAAATATAGGTTGGAAGTGTTTAGATCTAATGAAACTAGTTGGGGAGTTAGGTCTTTGGACCCTATTCTAGCTGGAACTTTTATATGTGAGTTCACCGGACTTGTTTTGACTAGGGAGCAAGCAGAAATTTTGACCATGGATGGTGAACATAACTCTTTGATTATATATCCAAATCGATTTTTGAATAGGTCTACTCAAGCATGGGGAGATTTGTCGATGATTGATGTTAATCATGTGCATCCCGCATATCCTACTTTAGATTTTGCATTGGATGTATCAACGATGAGGAATGTTGCCAGCTATATTAGTCATAGCCCAACTCCAAATGTGTTTGTTCAATTAGTTCTCTTTGATCATGGTAATTGGATGTTTCCCCATCTTATGGTATTTGCAATGGAAAACATCCCTCCAATGAGAGAGCTTAGTCTTGATCATGGGGTAGAAGCTGGGTAG
Protein sequence

>MS.gene056140.t1

MNFQDPNPSILRTIVTGPDELQNYDNNTLEGKASKSKQKLRGQNKELVHTAMDADHRPYREMVRRTRILFDSIRVSGLLEEENNRKNKKYLKASSLINQTEEVNNIPGVCIGDIFLYRSEMCVIGLHGQPQAGIDYLHASMSSNGQPIATSVVVSDGYNDDDQGDSIIYSGHGDMKQDQKLERGNLAMVTSMQYEIDVRVIRGFRYEGGTSTTSKVFVYDGLYKISECWFEKGISGFGVYKFMLSRVQGQPKMGSMILKEANMLKRGQLCDNPMYVLSDDISNGKENIGVRLYNDIDSDLYPMQFEYLPKAAFPMFLLPQRRSLIYECGPFCSCPSHCRNRVTQKGIKYRLEVFRSNETSWGVRSLDPILAGTFICEFTGLVLTREQAEILTMDGEHNSLIIYPNRFLNRSTQAWGDLSMIDVNHVHPAYPTLDFALDVSTMRNVASYISHSPTPNVFVQLVLFDHGNWMFPHLMVFAMENIPPMRELSLDHGVEAG