Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05662.t1 | XP_027354476.1 | 50.3 | 181 | 57 | 3 | 2 | 149 | 153 | 333 | 1.10E-32 | 150.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05662.t1 | Q8H1G0 | 65.1 | 43 | 15 | 0 | 30 | 72 | 223 | 265 | 2.0e-11 | 70.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05662.t1 | A0A1S2Y9V5 | 54.7 | 148 | 45 | 1 | 23 | 148 | 188 | 335 | 3.0e-32 | 148.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene05662.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05662.t1 | MTR_3g060200 | 38.971 | 272 | 100 | 9 | 1 | 217 | 10 | 270 | 7.05e-40 | 141 |
| MS.gene05662.t1 | MTR_3g060200 | 40.336 | 238 | 54 | 6 | 1 | 217 | 10 | 180 | 9.54e-39 | 136 |
| MS.gene05662.t1 | MTR_3g100040 | 50.000 | 162 | 40 | 2 | 16 | 136 | 65 | 226 | 1.48e-38 | 134 |
| MS.gene05662.t1 | MTR_3g100040 | 50.000 | 162 | 40 | 2 | 16 | 136 | 169 | 330 | 9.52e-38 | 134 |
| MS.gene05662.t1 | MTR_3g060200 | 37.879 | 198 | 76 | 6 | 1 | 162 | 10 | 196 | 2.08e-25 | 102 |
| MS.gene05662.t1 | MTR_3g060200 | 37.879 | 198 | 76 | 6 | 1 | 162 | 10 | 196 | 3.18e-25 | 102 |
| MS.gene05662.t1 | MTR_3g060200 | 38.158 | 152 | 53 | 4 | 70 | 217 | 275 | 389 | 1.88e-19 | 86.3 |
| MS.gene05662.t1 | MTR_4g093730 | 36.242 | 149 | 70 | 6 | 2 | 126 | 140 | 287 | 5.03e-18 | 81.3 |
| MS.gene05662.t1 | MTR_5g066510 | 43.373 | 83 | 40 | 2 | 30 | 109 | 203 | 281 | 2.25e-14 | 70.5 |
| MS.gene05662.t1 | MTR_3g100050 | 54.237 | 59 | 25 | 1 | 30 | 88 | 200 | 256 | 5.48e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05662.t1 | AT1G51600 | 65.116 | 43 | 15 | 0 | 30 | 72 | 223 | 265 | 4.84e-14 | 70.1 |
| MS.gene05662.t1 | AT1G51600 | 65.116 | 43 | 15 | 0 | 30 | 72 | 223 | 265 | 4.84e-14 | 70.1 |
| MS.gene05662.t1 | AT3G21175 | 65.116 | 43 | 15 | 0 | 30 | 72 | 219 | 261 | 2.79e-13 | 67.8 |
| MS.gene05662.t1 | AT3G21175 | 65.116 | 43 | 15 | 0 | 30 | 72 | 217 | 259 | 2.88e-13 | 67.8 |
| MS.gene05662.t1 | AT4G24470 | 43.056 | 72 | 36 | 1 | 30 | 101 | 214 | 280 | 9.31e-13 | 66.2 |
| MS.gene05662.t1 | AT4G24470 | 43.056 | 72 | 36 | 1 | 30 | 101 | 214 | 280 | 9.31e-13 | 66.2 |
| MS.gene05662.t1 | AT4G24470 | 59.091 | 44 | 18 | 0 | 30 | 73 | 214 | 257 | 1.26e-12 | 66.2 |
Find 54 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGAATTGTTCATTCTTC+AGG | 0.271089 | 3.2:+51413993 | MS.gene05662:CDS |
| AAGCGTTTAAACTGCCTATC+AGG | 0.314872 | 3.2:-51411806 | None:intergenic |
| TGGCATCACGTGGGCCAAAA+AGG | 0.324740 | 3.2:+51412035 | MS.gene05662:CDS |
| GTTGGGTGTTCTGAAGATTC+AGG | 0.326610 | 3.2:-51413957 | None:intergenic |
| ACCTTCAGTAGTTGTGGCCT+TGG | 0.357222 | 3.2:-51415879 | None:intergenic |
| TTTAAAACTACCTCTTCAAT+GGG | 0.357626 | 3.2:-51413807 | None:intergenic |
| TGCATGATTGTTCGAACCTT+CGG | 0.360199 | 3.2:-51413778 | None:intergenic |
| GGCCACAACTACTGAAGGTT+TGG | 0.369674 | 3.2:+51415883 | MS.gene05662:CDS |
| ATTTAAAACTACCTCTTCAA+TGG | 0.371536 | 3.2:-51413808 | None:intergenic |
| TGTTGGGTGTTCTGAAGATT+CGG | 0.392880 | 3.2:-51416069 | None:intergenic |
| GTTGGGTGTTCTGAAGATTC+GGG | 0.399093 | 3.2:-51416068 | None:intergenic |
| CTAATGGTAGATTGTTTGTT+GGG | 0.411712 | 3.2:-51413974 | None:intergenic |
| CCAACAAACAATCTACCATT+AGG | 0.419718 | 3.2:+51413975 | MS.gene05662:CDS |
| AAAATGCGTCCCGGGCCAGC+TGG | 0.423256 | 3.2:+51411988 | MS.gene05662:CDS |
| AGTAAATCTTCCAGCTGGCC+CGG | 0.440593 | 3.2:-51411998 | None:intergenic |
| TTCTGTTGATCAAAGTGGTC+TGG | 0.446513 | 3.2:+51412556 | MS.gene05662:CDS |
| AGGATGCTGCGTCACAAGAA+TGG | 0.446669 | 3.2:+51411767 | None:intergenic |
| TGTGGCCTTGGAAGGATCTT+CGG | 0.456624 | 3.2:-51415867 | None:intergenic |
| GAAGAATGAACAATTCCTAA+TGG | 0.472907 | 3.2:-51413990 | None:intergenic |
| CCTAACGGTAGTGTGTTTGT+TGG | 0.473043 | 3.2:-51416086 | None:intergenic |
| CATTCTTCAGGAAATAATGA+TGG | 0.478258 | 3.2:+51414005 | MS.gene05662:CDS |
| TGCATTGAACCCTATTGAAA+AGG | 0.485054 | 3.2:+51415913 | MS.gene05662:CDS |
| GGATGCTGCGTCACAAGAAT+GGG | 0.486112 | 3.2:+51411768 | None:intergenic |
| CCTAATGGTAGATTGTTTGT+TGG | 0.488068 | 3.2:-51413975 | None:intergenic |
| ACCTTCGGCAACAATGAACT+TGG | 0.488369 | 3.2:-51413763 | None:intergenic |
| AAACGCTTCAAGCAAAGTCC+TGG | 0.489447 | 3.2:+51411821 | MS.gene05662:CDS |
| CTAACGGTAGTGTGTTTGTT+GGG | 0.496188 | 3.2:-51416085 | None:intergenic |
| TTCAGGAAATAATGATGGAC+AGG | 0.503725 | 3.2:+51414010 | MS.gene05662:CDS |
| TCCAAGTTCATTGTTGCCGA+AGG | 0.503865 | 3.2:+51413762 | MS.gene05662:CDS |
| TCAGTAGTTGTGGCCTTGGA+AGG | 0.504019 | 3.2:-51415875 | None:intergenic |
| TTCAGAAAATGATGATGTCC+AGG | 0.515249 | 3.2:+51416121 | MS.gene05662:CDS |
| GGTTCAAGCGAAGTCCTGAT+AGG | 0.521442 | 3.2:+51411792 | MS.gene05662:CDS |
| GTAAATCTTCCAGCTGGCCC+GGG | 0.542997 | 3.2:-51411997 | None:intergenic |
| ATCCAAACCTTCAGTAGTTG+TGG | 0.552469 | 3.2:-51415885 | None:intergenic |
| TCCAAGGCCACAACTACTGA+AGG | 0.558504 | 3.2:+51415878 | MS.gene05662:CDS |
| CCAACAAACACACTACCGTT+AGG | 0.565471 | 3.2:+51416086 | MS.gene05662:CDS |
| TCGGCAACAATGAACTTGGA+AGG | 0.566559 | 3.2:-51413759 | None:intergenic |
| ACTCATTCTGTTGATCAAAG+TGG | 0.569763 | 3.2:+51412551 | MS.gene05662:CDS |
| TTTACTCTATGTAATATATG+TGG | 0.572890 | 3.2:+51412015 | MS.gene05662:CDS |
| CGGCAACAATGAACTTGGAA+GGG | 0.574551 | 3.2:-51413758 | None:intergenic |
| TGCATTAAACCCCATTGAAG+AGG | 0.577550 | 3.2:+51413797 | MS.gene05662:CDS |
| CATAGAGTAAATCTTCCAGC+TGG | 0.585448 | 3.2:-51412003 | None:intergenic |
| GAAAACGAGTATCTCTTCAT+CGG | 0.593537 | 3.2:-51417558 | None:intergenic |
| TGGTCTACCTACGAGAAAGA+TGG | 0.602525 | 3.2:-51417633 | None:intergenic |
| TATTTCCGAAGATCCTTCCA+AGG | 0.605617 | 3.2:+51415862 | MS.gene05662:CDS |
| GTAATATATGTGGCATCACG+TGG | 0.611896 | 3.2:+51412025 | MS.gene05662:CDS |
| GGACTTGCCATCTTTCTCGT+AGG | 0.621835 | 3.2:+51417626 | MS.gene05662:CDS |
| GAAGAATGATCAATTCCTAA+CGG | 0.628796 | 3.2:-51416101 | None:intergenic |
| AGACGTAGATGTCAACATTG+TGG | 0.632757 | 3.2:+51411943 | MS.gene05662:intron |
| TGCTGCGTCACAAGAATGGG+CGG | 0.646239 | 3.2:+51411771 | MS.gene05662:CDS |
| TTTAAAACTCACAAAGAACC+AGG | 0.655376 | 3.2:-51411839 | None:intergenic |
| TAATATATGTGGCATCACGT+GGG | 0.695349 | 3.2:+51412026 | MS.gene05662:CDS |
| TTAAAACTACCTCTTCAATG+GGG | 0.700888 | 3.2:-51413806 | None:intergenic |
| AAGATGGCAAGTCCTCGTCG+AGG | 0.743848 | 3.2:-51417617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGTCTTTATTTTATAT+TGG | + | chr3.2:51413641-51413660 | MS.gene05662:intron | 10.0% |
| !! | AATATTATGTTTCTTGTTAA+AGG | - | chr3.2:51415265-51415284 | None:intergenic | 15.0% |
| !! | ATATTATGTTTCTTGTTAAA+GGG | - | chr3.2:51415264-51415283 | None:intergenic | 15.0% |
| !! | TTTACTTTGTTAATAAAACT+GGG | - | chr3.2:51412926-51412945 | None:intergenic | 15.0% |
| !!! | AATTTGTTAAACACTTTAAT+TGG | - | chr3.2:51414844-51414863 | None:intergenic | 15.0% |
| !!! | ACCTAAAATAATCAATTTTA+GGG | + | chr3.2:51416417-51416436 | MS.gene05662:intron | 15.0% |
| !!! | ATGTTTTGTTTATTTTGATA+AGG | + | chr3.2:51417168-51417187 | MS.gene05662:intron | 15.0% |
| !!! | ATTAAAAATAACCACTTTTT+TGG | - | chr3.2:51416311-51416330 | None:intergenic | 15.0% |
| !!! | TATTTTTTAAATGAATTGAG+AGG | + | chr3.2:51414338-51414357 | MS.gene05662:intron | 15.0% |
| !!! | TTAAAAATAACCACTTTTTT+GGG | - | chr3.2:51416310-51416329 | None:intergenic | 15.0% |
| !!! | TTAAAAATACCTTTTCAATA+GGG | - | chr3.2:51415925-51415944 | None:intergenic | 15.0% |
| !!! | TTCTATTCATAATGAATTTT+AGG | - | chr3.2:51416355-51416374 | None:intergenic | 15.0% |
| !!! | TTTAAAAATACCTTTTCAAT+AGG | - | chr3.2:51415926-51415945 | None:intergenic | 15.0% |
| !! | AAAAAATTGTTCAGAGATTA+AGG | - | chr3.2:51413266-51413285 | None:intergenic | 20.0% |
| !! | AACTCTACAAGTAATTAAAA+TGG | - | chr3.2:51413580-51413599 | None:intergenic | 20.0% |
| !! | AATCAAAATACCATGAAATA+AGG | + | chr3.2:51412953-51412972 | MS.gene05662:intron | 20.0% |
| !! | ATACTTCTATGCTTAATTAA+TGG | + | chr3.2:51416823-51416842 | MS.gene05662:intron | 20.0% |
| !! | ATCGAATTTGAATAAACAAA+GGG | + | chr3.2:51416652-51416671 | MS.gene05662:intron | 20.0% |
| !! | ATTAATTAAGCATAGAAGTA+TGG | - | chr3.2:51416824-51416843 | None:intergenic | 20.0% |
| !! | CATAAAAATCTTATGAAAAC+CGG | - | chr3.2:51417365-51417384 | None:intergenic | 20.0% |
| !! | CATTATTATGCTTATAAACT+TGG | - | chr3.2:51415724-51415743 | None:intergenic | 20.0% |
| !! | CTATACAAGTTCAAATATTT+GGG | - | chr3.2:51415308-51415327 | None:intergenic | 20.0% |
| !! | CTTTACTTTGTTAATAAAAC+TGG | - | chr3.2:51412927-51412946 | None:intergenic | 20.0% |
| !! | GTTATTGTATATGTTTGTTT+CGG | + | chr3.2:51417493-51417512 | MS.gene05662:intron | 20.0% |
| !! | TAAAAAAAAATCTAGTGTTG+AGG | + | chr3.2:51414969-51414988 | MS.gene05662:intron | 20.0% |
| !! | TACAAAACAAGTTATTCAAT+AGG | - | chr3.2:51414040-51414059 | None:intergenic | 20.0% |
| !! | TACAAGTAATTAAAATGGAA+AGG | - | chr3.2:51413575-51413594 | None:intergenic | 20.0% |
| !! | TAGAAGTAATTAAAATGGAA+AGG | - | chr3.2:51415688-51415707 | None:intergenic | 20.0% |
| !! | TATTATGTTTCTTGTTAAAG+GGG | - | chr3.2:51415263-51415282 | None:intergenic | 20.0% |
| !! | TCTATACAAGTTCAAATATT+TGG | - | chr3.2:51415309-51415328 | None:intergenic | 20.0% |
| !! | TTTACTCTATGTAATATATG+TGG | + | chr3.2:51412015-51412034 | MS.gene05662:CDS | 20.0% |
| !!! | AAAAAAAAATCTAGTGTTGA+GGG | + | chr3.2:51414970-51414989 | MS.gene05662:intron | 20.0% |
| !!! | AACTCTAGAAGTAATTAAAA+TGG | - | chr3.2:51415693-51415712 | None:intergenic | 20.0% |
| !!! | CAAAGTTCTCTAATTTATTT+TGG | - | chr3.2:51415409-51415428 | None:intergenic | 20.0% |
| !!! | GACCTAAAATAATCAATTTT+AGG | + | chr3.2:51416416-51416435 | MS.gene05662:intron | 20.0% |
| !!! | GATAAGGTTTTATAAGTTTT+AGG | + | chr3.2:51417184-51417203 | MS.gene05662:intron | 20.0% |
| !!! | GGTTATTTTTAATCCAAATA+TGG | + | chr3.2:51416318-51416337 | MS.gene05662:intron | 20.0% |
| !!! | TGAATTTAACTTTGTTATGT+TGG | + | chr3.2:51416951-51416970 | MS.gene05662:intron | 20.0% |
| !!! | TGTTTAACAAATTTGTTTGT+GGG | + | chr3.2:51414851-51414870 | MS.gene05662:intron | 20.0% |
| !!! | TTAGGATTCTTTTTTATCTT+GGG | + | chr3.2:51417006-51417025 | MS.gene05662:intron | 20.0% |
| !!! | TTCAATTTTAACACTAACTA+AGG | + | chr3.2:51416781-51416800 | MS.gene05662:intron | 20.0% |
| !!! | TTGTTATGTTGGAAATATTT+TGG | + | chr3.2:51416962-51416981 | MS.gene05662:intron | 20.0% |
| !!! | TTTATTCTTTTACATTCAGT+TGG | + | chr3.2:51415956-51415975 | MS.gene05662:intron | 20.0% |
| ! | AAAAAAATTATGGCATGTTC+AGG | + | chr3.2:51413722-51413741 | MS.gene05662:intron | 25.0% |
| ! | AAAAAATGATGTTGAATGCA+AGG | - | chr3.2:51415605-51415624 | None:intergenic | 25.0% |
| ! | AAAAAATTATGGCATGTTCA+GGG | + | chr3.2:51413723-51413742 | MS.gene05662:intron | 25.0% |
| ! | AAATAATGTTGAAGGCAAAA+TGG | - | chr3.2:51413490-51413509 | None:intergenic | 25.0% |
| ! | AATATTTCATGACTTTGTGT+TGG | + | chr3.2:51417128-51417147 | MS.gene05662:intron | 25.0% |
| ! | ACACGTCATAATTCTTTAAT+TGG | - | chr3.2:51412995-51413014 | None:intergenic | 25.0% |
| ! | ACATAATCTGTTCAATCATT+CGG | + | chr3.2:51413546-51413565 | MS.gene05662:intron | 25.0% |
| ! | ACTGAATAAGAATTTAGAAG+GGG | + | chr3.2:51416708-51416727 | MS.gene05662:intron | 25.0% |
| ! | AGACTGAATAAGAATTTAGA+AGG | + | chr3.2:51416706-51416725 | MS.gene05662:intron | 25.0% |
| ! | AGTTATTCAATAAGAATACC+TGG | - | chr3.2:51416142-51416161 | None:intergenic | 25.0% |
| ! | ATACAATCATTTCCTATAGA+CGG | + | chr3.2:51416560-51416579 | MS.gene05662:intron | 25.0% |
| ! | ATCAACAAAACACAAATACA+AGG | - | chr3.2:51417527-51417546 | None:intergenic | 25.0% |
| ! | ATTCAATTGGACAATTTATG+TGG | - | chr3.2:51414617-51414636 | None:intergenic | 25.0% |
| ! | CATCGAATTTGAATAAACAA+AGG | + | chr3.2:51416651-51416670 | MS.gene05662:intron | 25.0% |
| ! | CATTATAATGCTTATGAACT+TGG | - | chr3.2:51413611-51413630 | None:intergenic | 25.0% |
| ! | CCATGTGCAAAAAAAAATTA+TGG | + | chr3.2:51413712-51413731 | MS.gene05662:intron | 25.0% |
| ! | CTGTTCTAACTTTAATCTAA+TGG | - | chr3.2:51414420-51414439 | None:intergenic | 25.0% |
| ! | GACTGAATAAGAATTTAGAA+GGG | + | chr3.2:51416707-51416726 | MS.gene05662:intron | 25.0% |
| ! | GATTCTATTCCATAATCTTA+TGG | + | chr3.2:51415194-51415213 | MS.gene05662:intron | 25.0% |
| ! | GCATCAAAAAATAATGTTGA+AGG | - | chr3.2:51413498-51413517 | None:intergenic | 25.0% |
| ! | GCTAGAATAAAAAAGAAGTT+TGG | + | chr3.2:51412191-51412210 | MS.gene05662:intron | 25.0% |
| ! | GGAATACATCTAAACAAATA+CGG | - | chr3.2:51415164-51415183 | None:intergenic | 25.0% |
| ! | GGACAATAAATTACCATATT+TGG | - | chr3.2:51416334-51416353 | None:intergenic | 25.0% |
| ! | TAAGGGAAAATAATACAAGT+TGG | + | chr3.2:51412824-51412843 | MS.gene05662:intron | 25.0% |
| ! | TACAGAAATATCTCATGTTT+AGG | - | chr3.2:51414133-51414152 | None:intergenic | 25.0% |
| ! | TCAACAAAACACAAATACAA+GGG | - | chr3.2:51417526-51417545 | None:intergenic | 25.0% |
| ! | TCGAATTTGAATAAACAAAG+GGG | + | chr3.2:51416653-51416672 | MS.gene05662:intron | 25.0% |
| ! | TCTTTGACTAAAAAGAAAAG+TGG | - | chr3.2:51416382-51416401 | None:intergenic | 25.0% |
| ! | TGAAATATAATGAACGACAA+TGG | - | chr3.2:51412353-51412372 | None:intergenic | 25.0% |
| ! | TTTCGTCAATACTTAAGAAA+AGG | - | chr3.2:51413879-51413898 | None:intergenic | 25.0% |
| !! | AACAAAATGACTAACCTTTT+TGG | - | chr3.2:51412052-51412071 | None:intergenic | 25.0% |
| !! | AGAGTTTTACTTGTTCATTT+TGG | - | chr3.2:51413418-51413437 | None:intergenic | 25.0% |
| !! | ATTATTTCTCCAATCTAAAC+AGG | + | chr3.2:51414269-51414288 | MS.gene05662:intron | 25.0% |
| !! | ATTTAAAACTACCTCTTCAA+TGG | - | chr3.2:51413811-51413830 | None:intergenic | 25.0% |
| !! | CCATGAAAATTTTATGCAAA+TGG | - | chr3.2:51415833-51415852 | None:intergenic | 25.0% |
| !! | CCATTTGCATAAAATTTTCA+TGG | + | chr3.2:51415830-51415849 | MS.gene05662:intron | 25.0% |
| !! | GCCCTAAAATTGATTATTTT+AGG | - | chr3.2:51416421-51416440 | None:intergenic | 25.0% |
| !! | GTGTTTAACAAATTTGTTTG+TGG | + | chr3.2:51414850-51414869 | MS.gene05662:intron | 25.0% |
| !! | TAATTATCTGCTTGTACTTT+TGG | + | chr3.2:51413110-51413129 | MS.gene05662:intron | 25.0% |
| !! | TAGGTAAAATGAGAGATTTT+AGG | + | chr3.2:51417203-51417222 | MS.gene05662:intron | 25.0% |
| !! | TTATTCTTTTACAGCCAATT+GGG | + | chr3.2:51413841-51413860 | MS.gene05662:intron | 25.0% |
| !! | TTGTTATTGCTTAACAAATG+TGG | + | chr3.2:51417444-51417463 | MS.gene05662:intron | 25.0% |
| !! | TTTAAAACTACCTCTTCAAT+GGG | - | chr3.2:51413810-51413829 | None:intergenic | 25.0% |
| !! | TTTATTCTTTTACAGCCAAT+TGG | + | chr3.2:51413840-51413859 | MS.gene05662:intron | 25.0% |
| !! | TTTTTAAATGAATTGAGAGG+TGG | + | chr3.2:51414341-51414360 | MS.gene05662:intron | 25.0% |
| !!! | AACGGATTGTTAAAATTGTT+TGG | - | chr3.2:51412667-51412686 | None:intergenic | 25.0% |
| !!! | AGGAGAAAGTTGATTTTAAT+AGG | + | chr3.2:51417223-51417242 | MS.gene05662:intron | 25.0% |
| !!! | AGTCATTTTGTTAACAAGTA+TGG | + | chr3.2:51412060-51412079 | MS.gene05662:intron | 25.0% |
| !!! | CCATAATTTTTTTTTGCACA+TGG | - | chr3.2:51413715-51413734 | None:intergenic | 25.0% |
| !!! | CTTAGGATTCTTTTTTATCT+TGG | + | chr3.2:51417005-51417024 | MS.gene05662:intron | 25.0% |
| !!! | TAGGTATGATTTTGAAAAGT+TGG | + | chr3.2:51417242-51417261 | MS.gene05662:intron | 25.0% |
| !!! | TTTGAGTCTTTATTTTACAC+TGG | + | chr3.2:51415758-51415777 | MS.gene05662:intron | 25.0% |
| !!! | TTTTTAAGCTAGATTCAAAG+AGG | + | chr3.2:51417036-51417055 | MS.gene05662:intron | 25.0% |
| AAAAGACTTGATTGCACTTT+AGG | - | chr3.2:51416532-51416551 | None:intergenic | 30.0% | |
| AATTCGATGGCATTTAGTAT+GGG | - | chr3.2:51415074-51415093 | None:intergenic | 30.0% | |
| ATCCACTGAATATTATTTGC+AGG | + | chr3.2:51413380-51413399 | MS.gene05662:intron | 30.0% | |
| ATCCTGCAAATAATATTCAG+TGG | - | chr3.2:51413385-51413404 | None:intergenic | 30.0% | |
| ATGAACTAAAGATCAAGCTT+AGG | + | chr3.2:51416988-51417007 | MS.gene05662:intron | 30.0% | |
| ATTGAGAACAAGTTACTTGT+TGG | + | chr3.2:51416683-51416702 | MS.gene05662:intron | 30.0% | |
| CATAATCTTATGGATCAAGT+AGG | + | chr3.2:51415204-51415223 | MS.gene05662:intron | 30.0% | |
| CATTCTTCAGGAAATAATGA+TGG | + | chr3.2:51414005-51414024 | MS.gene05662:CDS | 30.0% | |
| CTAATGGTAGATTGTTTGTT+GGG | - | chr3.2:51413977-51413996 | None:intergenic | 30.0% | |
| CTACTTGATCCATAAGATTA+TGG | - | chr3.2:51415206-51415225 | None:intergenic | 30.0% | |
| CTTCATTCTTCTATGCTTAT+TGG | + | chr3.2:51415577-51415596 | MS.gene05662:intron | 30.0% | |
| CTTCTATGAGTTATGATACT+TGG | + | chr3.2:51416021-51416040 | MS.gene05662:intron | 30.0% | |
| GAAGAATGAACAATTCCTAA+TGG | - | chr3.2:51413993-51414012 | None:intergenic | 30.0% | |
| GAAGAATGATCAATTCCTAA+CGG | - | chr3.2:51416104-51416123 | None:intergenic | 30.0% | |
| GCAAATAATATTCAGTGGAT+AGG | - | chr3.2:51413380-51413399 | None:intergenic | 30.0% | |
| GGAATAGAATCAATACAGAA+GGG | - | chr3.2:51415185-51415204 | None:intergenic | 30.0% | |
| GTTAAATTCAAAGCAGAAAG+AGG | - | chr3.2:51416941-51416960 | None:intergenic | 30.0% | |
| GTTCCAACAGTATATTCAAT+TGG | - | chr3.2:51414630-51414649 | None:intergenic | 30.0% | |
| TAAGCATGAATCAGCAATAT+GGG | - | chr3.2:51415794-51415813 | None:intergenic | 30.0% | |
| TAATTCGATGGCATTTAGTA+TGG | - | chr3.2:51415075-51415094 | None:intergenic | 30.0% | |
| TACAAGTTCAAATATTTGGG+AGG | - | chr3.2:51415305-51415324 | None:intergenic | 30.0% | |
| TACATAATCTATTCCATCCT+CGG | + | chr3.2:51415658-51415677 | MS.gene05662:intron | 30.0% | |
| TGGAATAGAATCAATACAGA+AGG | - | chr3.2:51415186-51415205 | None:intergenic | 30.0% | |
| TGTCCAATTGAATATACTGT+TGG | + | chr3.2:51414624-51414643 | MS.gene05662:intron | 30.0% | |
| TTAAAACTACCTCTTCAATG+GGG | - | chr3.2:51413809-51413828 | None:intergenic | 30.0% | |
| TTAGCACATCAATAACTTGA+CGG | - | chr3.2:51412878-51412897 | None:intergenic | 30.0% | |
| TTAGGAATTGTTCATTCTTC+AGG | + | chr3.2:51413993-51414012 | MS.gene05662:CDS | 30.0% | |
| TTGGTAAATGTGTATTTGTC+AGG | + | chr3.2:51416040-51416059 | MS.gene05662:intron | 30.0% | |
| ! | AAAATAATACAAGTTGGAGG+AGG | + | chr3.2:51412830-51412849 | MS.gene05662:intron | 30.0% |
| ! | AAAGCATTTCTATTGTCCAA+GGG | + | chr3.2:51416750-51416769 | MS.gene05662:intron | 30.0% |
| ! | ACAATCCGTTTGAAATCAAA+TGG | + | chr3.2:51412677-51412696 | MS.gene05662:intron | 30.0% |
| ! | AGGCAATTTTGTCAAGAAAT+TGG | + | chr3.2:51414711-51414730 | MS.gene05662:intron | 30.0% |
| ! | AGTTTATGATACTTGCTACA+TGG | + | chr3.2:51413916-51413935 | MS.gene05662:intron | 30.0% |
| ! | CAACACCATTTGATTTCAAA+CGG | - | chr3.2:51412685-51412704 | None:intergenic | 30.0% |
| ! | GCTATTGTTTCTTAATTCGA+TGG | - | chr3.2:51415087-51415106 | None:intergenic | 30.0% |
| ! | GTTTATGATACTTGCTACAT+GGG | + | chr3.2:51413917-51413936 | MS.gene05662:intron | 30.0% |
| ! | TCACAAAACACCTTATTTCA+TGG | - | chr3.2:51412966-51412985 | None:intergenic | 30.0% |
| ! | TGAGTGAAGTTCTTTTTGTT+TGG | + | chr3.2:51417068-51417087 | MS.gene05662:intron | 30.0% |
| ! | TGGACAATAGAAATGCTTTT+GGG | - | chr3.2:51416749-51416768 | None:intergenic | 30.0% |
| ! | TGTATGTTTTGTGTTTGTCT+TGG | + | chr3.2:51415427-51415446 | MS.gene05662:intron | 30.0% |
| ! | TTGGACAATAGAAATGCTTT+TGG | - | chr3.2:51416750-51416769 | None:intergenic | 30.0% |
| ! | TTTAAAACTCACAAAGAACC+AGG | - | chr3.2:51411842-51411861 | None:intergenic | 30.0% |
| !! | AAAAGCATTTCTATTGTCCA+AGG | + | chr3.2:51416749-51416768 | MS.gene05662:intron | 30.0% |
| !!! | ACTTTTTTGGGCCAAAAATA+TGG | - | chr3.2:51416298-51416317 | None:intergenic | 30.0% |
| !!! | ATATTTTTGGCCCAAAAAAG+TGG | + | chr3.2:51416297-51416316 | MS.gene05662:intron | 30.0% |
| !!! | CGTTTTTTTTAAACTCTGCA+GGG | + | chr3.2:51412497-51412516 | MS.gene05662:intron | 30.0% |
| !!! | CTTTTTTGGGCCAAAAATAT+GGG | - | chr3.2:51416297-51416316 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTAAACTCTGCAG+GGG | + | chr3.2:51412498-51412517 | MS.gene05662:intron | 30.0% |
| !!! | TTTGTGAGTTTTAAACGTAG+TGG | + | chr3.2:51411847-51411866 | MS.gene05662:intron | 30.0% |
| AAATTGAACCCAAAATCCCT+TGG | - | chr3.2:51416769-51416788 | None:intergenic | 35.0% | |
| AACGTGTATGTCTATCTTGA+GGG | + | chr3.2:51415126-51415145 | MS.gene05662:intron | 35.0% | |
| ACATAATCTATTCCATCCTC+GGG | + | chr3.2:51415659-51415678 | MS.gene05662:intron | 35.0% | |
| ACGAAGCATAATCTCTTATC+AGG | + | chr3.2:51412768-51412787 | MS.gene05662:intron | 35.0% | |
| ACTCATTCTGTTGATCAAAG+TGG | + | chr3.2:51412551-51412570 | MS.gene05662:CDS | 35.0% | |
| ATCACGAATGCGAAGTAAAA+AGG | - | chr3.2:51412402-51412421 | None:intergenic | 35.0% | |
| ATTCGTCAATACCCAAGAAA+AGG | - | chr3.2:51415995-51416014 | None:intergenic | 35.0% | |
| ATTGCTTAACAAATGTGGTG+TGG | + | chr3.2:51417449-51417468 | MS.gene05662:intron | 35.0% | |
| ATTTCATGTCGTGTTCTTTG+TGG | + | chr3.2:51413177-51413196 | MS.gene05662:intron | 35.0% | |
| CAAAGAAAACCAATTCTTGC+CGG | + | chr3.2:51417343-51417362 | MS.gene05662:intron | 35.0% | |
| CATAACTGACAAAACTGTAC+TGG | + | chr3.2:51416195-51416214 | MS.gene05662:intron | 35.0% | |
| CCAACAAACAATCTACCATT+AGG | + | chr3.2:51413975-51413994 | MS.gene05662:CDS | 35.0% | |
| CCTAATGGTAGATTGTTTGT+TGG | - | chr3.2:51413978-51413997 | None:intergenic | 35.0% | |
| CGAAGCATAATCTCTTATCA+GGG | + | chr3.2:51412769-51412788 | MS.gene05662:intron | 35.0% | |
| CGTACATCAGAAGAAAGATT+GGG | + | chr3.2:51415521-51415540 | MS.gene05662:intron | 35.0% | |
| CGTCAATACTTAAGAAAAGG+TGG | - | chr3.2:51413876-51413895 | None:intergenic | 35.0% | |
| CTAAGCATGAATCAGCAATA+TGG | - | chr3.2:51415795-51415814 | None:intergenic | 35.0% | |
| GAAAACGAGTATCTCTTCAT+CGG | - | chr3.2:51417561-51417580 | None:intergenic | 35.0% | |
| GCAACAAATGTGCTAATTGA+GGG | + | chr3.2:51416467-51416486 | MS.gene05662:intron | 35.0% | |
| GCGTTCTCTATTTGATGTAA+TGG | + | chr3.2:51415007-51415026 | MS.gene05662:intron | 35.0% | |
| TAAAACACGCCTGTTTAGAT+TGG | - | chr3.2:51414281-51414300 | None:intergenic | 35.0% | |
| TAACAATCAACAGTGTGAGT+CGG | - | chr3.2:51416894-51416913 | None:intergenic | 35.0% | |
| TAACGTGTATGTCTATCTTG+AGG | + | chr3.2:51415125-51415144 | MS.gene05662:intron | 35.0% | |
| TAATATATGTGGCATCACGT+GGG | + | chr3.2:51412026-51412045 | MS.gene05662:CDS | 35.0% | |
| TACAAGACATATGTGGTTAG+TGG | - | chr3.2:51412137-51412156 | None:intergenic | 35.0% | |
| TATGGTTTCGATGAAATGCT+TGG | + | chr3.2:51412078-51412097 | MS.gene05662:intron | 35.0% | |
| TCGTACATCAGAAGAAAGAT+TGG | + | chr3.2:51415520-51415539 | MS.gene05662:intron | 35.0% | |
| TGACTTTGTCAAGAAATTCC+TGG | + | chr3.2:51414746-51414765 | MS.gene05662:intron | 35.0% | |
| TGCAACAAATGTGCTAATTG+AGG | + | chr3.2:51416466-51416485 | MS.gene05662:intron | 35.0% | |
| TGCATTGAACCCTATTGAAA+AGG | + | chr3.2:51415913-51415932 | MS.gene05662:CDS | 35.0% | |
| TTAGCATTATGAGAAAGAGC+TGG | - | chr3.2:51413667-51413686 | None:intergenic | 35.0% | |
| TTAGTCGAGAATGCAGATAA+GGG | + | chr3.2:51412807-51412826 | MS.gene05662:intron | 35.0% | |
| TTATGAAAACCGGCAAGAAT+TGG | - | chr3.2:51417355-51417374 | None:intergenic | 35.0% | |
| TTGAAAATCCATCAACACGA+GGG | - | chr3.2:51414535-51414554 | None:intergenic | 35.0% | |
| TTGTCAGCGTGATAAAAAAG+AGG | + | chr3.2:51416505-51416524 | MS.gene05662:intron | 35.0% | |
| TTTAGTCGAGAATGCAGATA+AGG | + | chr3.2:51412806-51412825 | MS.gene05662:intron | 35.0% | |
| ! | AAGTTGTTTCATTAAGCCAC+TGG | + | chr3.2:51415328-51415347 | MS.gene05662:intron | 35.0% |
| ! | ATACTCGTTTTCAGAGTTTG+TGG | + | chr3.2:51417569-51417588 | MS.gene05662:CDS | 35.0% |
| ! | ATATTTTTCCCCATCTGAAG+AGG | + | chr3.2:51414169-51414188 | MS.gene05662:intron | 35.0% |
| ! | CGTTTGAAATCAAATGGTGT+TGG | + | chr3.2:51412683-51412702 | MS.gene05662:intron | 35.0% |
| ! | CTTTGTAAGTCAAAGTGTCA+TGG | + | chr3.2:51417286-51417305 | MS.gene05662:intron | 35.0% |
| ! | GCAAAAGTACAAGACATATG+TGG | - | chr3.2:51412144-51412163 | None:intergenic | 35.0% |
| ! | GGGAAAATAATACAAGTTGG+AGG | + | chr3.2:51412827-51412846 | MS.gene05662:intron | 35.0% |
| ! | GTACTTTTGGATGTCACAAT+GGG | + | chr3.2:51413123-51413142 | MS.gene05662:intron | 35.0% |
| ! | TATGTCTTGTACTTTTGCTC+AGG | + | chr3.2:51412146-51412165 | MS.gene05662:intron | 35.0% |
| ! | TCTATTGTCCAAGGGATTTT+GGG | + | chr3.2:51416758-51416777 | MS.gene05662:intron | 35.0% |
| ! | TGATAACTGTGTATGGACTA+GGG | + | chr3.2:51415544-51415563 | MS.gene05662:intron | 35.0% |
| ! | TGTACTTTTGGATGTCACAA+TGG | + | chr3.2:51413122-51413141 | MS.gene05662:intron | 35.0% |
| ! | TTCAGAAAATGATGATGTCC+AGG | + | chr3.2:51416121-51416140 | MS.gene05662:CDS | 35.0% |
| ! | TTCAGTGGATAGGATGTTTT+AGG | - | chr3.2:51413370-51413389 | None:intergenic | 35.0% |
| ! | TTCTATTGTCCAAGGGATTT+TGG | + | chr3.2:51416757-51416776 | MS.gene05662:intron | 35.0% |
| ! | TTTTTATGTCCTCGAAGTGT+TGG | + | chr3.2:51417377-51417396 | MS.gene05662:intron | 35.0% |
| !! | AAATCAAATGGTGTTGGTGA+TGG | + | chr3.2:51412689-51412708 | MS.gene05662:intron | 35.0% |
| !! | AAGTAGCCTGACTTACTTTT+TGG | + | chr3.2:51416234-51416253 | MS.gene05662:intron | 35.0% |
| !! | AAGTGTTGGGTGAAAATATG+CGG | + | chr3.2:51417391-51417410 | MS.gene05662:intron | 35.0% |
| !! | GTTCTTTTTGTTTGGACCTT+AGG | + | chr3.2:51417076-51417095 | MS.gene05662:intron | 35.0% |
| !! | TTCAGGAAATAATGATGGAC+AGG | + | chr3.2:51414010-51414029 | MS.gene05662:CDS | 35.0% |
| !! | TTTTATGTCCTCGAAGTGTT+GGG | + | chr3.2:51417378-51417397 | MS.gene05662:intron | 35.0% |
| !!! | ATTATTTTAGGTCCCAGAAG+TGG | - | chr3.2:51416409-51416428 | None:intergenic | 35.0% |
| !!! | CAATTTTAGGGCCAAAAATC+TGG | + | chr3.2:51416429-51416448 | MS.gene05662:intron | 35.0% |
| !!! | GCAGTCAACATTTTTTTCTG+AGG | + | chr3.2:51416852-51416871 | MS.gene05662:intron | 35.0% |
| !!! | GCGTTTTTTTTAAACTCTGC+AGG | + | chr3.2:51412496-51412515 | MS.gene05662:intron | 35.0% |
| AAAATCACTTGAGCATGGTG+GGG | - | chr3.2:51414394-51414413 | None:intergenic | 40.0% | |
| AAACAACCTAACCCCCATTA+AGG | + | chr3.2:51413300-51413319 | MS.gene05662:intron | 40.0% | |
| AAAGACCAATTCGACTACGA+TGG | + | chr3.2:51415032-51415051 | MS.gene05662:intron | 40.0% | |
| AACAACCTAACCCCCATTAA+GGG | + | chr3.2:51413301-51413320 | MS.gene05662:intron | 40.0% | |
| AAGACCAATTCGACTACGAT+GGG | + | chr3.2:51415033-51415052 | MS.gene05662:intron | 40.0% | |
| AAGCGTTTAAACTGCCTATC+AGG | - | chr3.2:51411809-51411828 | None:intergenic | 40.0% | |
| ACAAATCCATTGACCTTCGA+GGG | + | chr3.2:51416625-51416644 | MS.gene05662:intron | 40.0% | |
| ACGTGTATGTCTATCTTGAG+GGG | + | chr3.2:51415127-51415146 | MS.gene05662:intron | 40.0% | |
| AGAAAGCAAGGCCAAGATAA+CGG | + | chr3.2:51414564-51414583 | MS.gene05662:intron | 40.0% | |
| AGACGTAGATGTCAACATTG+TGG | + | chr3.2:51411943-51411962 | MS.gene05662:intron | 40.0% | |
| AGATATCCAACACCGTCTAT+AGG | - | chr3.2:51416575-51416594 | None:intergenic | 40.0% | |
| AGCAAACAAGTATGGTCAAC+AGG | - | chr3.2:51412426-51412445 | None:intergenic | 40.0% | |
| AGCATAAGGAGCTCATTACA+CGG | - | chr3.2:51415492-51415511 | None:intergenic | 40.0% | |
| ATCCAAACCTTCAGTAGTTG+TGG | - | chr3.2:51415888-51415907 | None:intergenic | 40.0% | |
| ATTGTAAGGGGAATCGAGAA+CGG | - | chr3.2:51414652-51414671 | None:intergenic | 40.0% | |
| CAAGTTTCCATCAGAAAGCA+AGG | + | chr3.2:51414552-51414571 | MS.gene05662:intron | 40.0% | |
| CACATCAATAACTTGACGGA+TGG | - | chr3.2:51412874-51412893 | None:intergenic | 40.0% | |
| CATAGAGTAAATCTTCCAGC+TGG | - | chr3.2:51412006-51412025 | None:intergenic | 40.0% | |
| CCAGTTGCAAAAAGCTTAGT+GGG | + | chr3.2:51412632-51412651 | MS.gene05662:intron | 40.0% | |
| CGACGTCAATTTCAACACAA+AGG | - | chr3.2:51414789-51414808 | None:intergenic | 40.0% | |
| CTAACGGTAGTGTGTTTGTT+GGG | - | chr3.2:51416088-51416107 | None:intergenic | 40.0% | |
| CTCCATTCCTATTTCCTACA+CGG | - | chr3.2:51415355-51415374 | None:intergenic | 40.0% | |
| CTCGATTCCCCTTACAATTT+GGG | + | chr3.2:51414654-51414673 | MS.gene05662:intron | 40.0% | |
| CTTGAAAATCCATCAACACG+AGG | - | chr3.2:51414536-51414555 | None:intergenic | 40.0% | |
| GAAAATCACTTGAGCATGGT+GGG | - | chr3.2:51414395-51414414 | None:intergenic | 40.0% | |
| GAAACACAGATCTTAAAGCC+AGG | - | chr3.2:51414767-51414786 | None:intergenic | 40.0% | |
| GAATCTACAGTTACAGTCCA+TGG | + | chr3.2:51414907-51414926 | MS.gene05662:intron | 40.0% | |
| GAGAATGCAGCAAACAAGTA+TGG | - | chr3.2:51412434-51412453 | None:intergenic | 40.0% | |
| GATTGGGTGATAACTGTGTA+TGG | + | chr3.2:51415537-51415556 | MS.gene05662:intron | 40.0% | |
| GCAACAGATACGATACTTGA+GGG | - | chr3.2:51416261-51416280 | None:intergenic | 40.0% | |
| GTAATATATGTGGCATCACG+TGG | + | chr3.2:51412025-51412044 | MS.gene05662:CDS | 40.0% | |
| GTATCGTATCTGTTGCAGTT+TGG | + | chr3.2:51416265-51416284 | MS.gene05662:intron | 40.0% | |
| GTGATAACTGTGTATGGACT+AGG | + | chr3.2:51415543-51415562 | MS.gene05662:intron | 40.0% | |
| GTGTGTGCGTGTATATATTG+TGG | + | chr3.2:51417471-51417490 | MS.gene05662:intron | 40.0% | |
| GTGTTGAAATTGACGTCGAA+GGG | + | chr3.2:51414791-51414810 | MS.gene05662:intron | 40.0% | |
| TACAAATCCATTGACCTTCG+AGG | + | chr3.2:51416624-51416643 | MS.gene05662:intron | 40.0% | |
| TACATTCAGTTGGCAGTGTT+CGG | + | chr3.2:51415966-51415985 | MS.gene05662:intron | 40.0% | |
| TAGGACTACTTGAACTCACA+TGG | - | chr3.2:51414114-51414133 | None:intergenic | 40.0% | |
| TATTTCCGAAGATCCTTCCA+AGG | + | chr3.2:51415862-51415881 | MS.gene05662:CDS | 40.0% | |
| TCATTTCCTATAGACGGTGT+TGG | + | chr3.2:51416566-51416585 | MS.gene05662:intron | 40.0% | |
| TCTCGATTCCCCTTACAATT+TGG | + | chr3.2:51414653-51414672 | MS.gene05662:intron | 40.0% | |
| TGCAACAGATACGATACTTG+AGG | - | chr3.2:51416262-51416281 | None:intergenic | 40.0% | |
| TGCATGATTGTTCGAACCTT+CGG | - | chr3.2:51413781-51413800 | None:intergenic | 40.0% | |
| TGCATTAAACCCCATTGAAG+AGG | + | chr3.2:51413797-51413816 | MS.gene05662:CDS | 40.0% | |
| TGTAGAGCTTGACACAATAG+TGG | - | chr3.2:51416608-51416627 | None:intergenic | 40.0% | |
| TGTGTTGAAATTGACGTCGA+AGG | + | chr3.2:51414790-51414809 | MS.gene05662:intron | 40.0% | |
| TGTTTCTTGTTAAAGGGGAG+AGG | - | chr3.2:51415258-51415277 | None:intergenic | 40.0% | |
| TTCTGTTGATCAAAGTGGTC+TGG | + | chr3.2:51412556-51412575 | MS.gene05662:CDS | 40.0% | |
| TTGCCTCTTTCTGACATAAC+CGG | - | chr3.2:51414697-51414716 | None:intergenic | 40.0% | |
| ! | AAACGTAGTGGCTCTTTTGT+GGG | + | chr3.2:51411859-51411878 | MS.gene05662:intron | 40.0% |
| ! | AGTCAAAGAATTGCCACTTC+TGG | + | chr3.2:51416393-51416412 | MS.gene05662:intron | 40.0% |
| ! | AGTGTTGGGTGAAAATATGC+GGG | + | chr3.2:51417392-51417411 | MS.gene05662:intron | 40.0% |
| ! | ATAATGGAGGAGGTGAAAGA+TGG | - | chr3.2:51414457-51414476 | None:intergenic | 40.0% |
| ! | CGCTGACAAATCGAACTTTT+CGG | - | chr3.2:51416494-51416513 | None:intergenic | 40.0% |
| ! | GAGGACTATTAGTCTCAGTA+TGG | + | chr3.2:51415372-51415391 | MS.gene05662:intron | 40.0% |
| ! | GTCAAAGAATTGCCACTTCT+GGG | + | chr3.2:51416394-51416413 | MS.gene05662:intron | 40.0% |
| ! | GTGAAAATATGCGGGTTATG+TGG | + | chr3.2:51417400-51417419 | MS.gene05662:intron | 40.0% |
| ! | TAAACGTAGTGGCTCTTTTG+TGG | + | chr3.2:51411858-51411877 | MS.gene05662:intron | 40.0% |
| ! | TACAACTAGCCTCTTCAGAT+GGG | - | chr3.2:51414181-51414200 | None:intergenic | 40.0% |
| ! | TAGCACATTTGTTGCAATCG+TGG | - | chr3.2:51416462-51416481 | None:intergenic | 40.0% |
| ! | TATTTTCACCCAACACTTCG+AGG | - | chr3.2:51417389-51417408 | None:intergenic | 40.0% |
| ! | TCCGTTCTTTTCCGTTATCT+TGG | - | chr3.2:51414578-51414597 | None:intergenic | 40.0% |
| ! | TGCTACATGGGTATTTTCTC+AGG | + | chr3.2:51413929-51413948 | MS.gene05662:intron | 40.0% |
| ! | TTACAACTAGCCTCTTCAGA+TGG | - | chr3.2:51414182-51414201 | None:intergenic | 40.0% |
| ! | TTGGTCTCGACCCATATTTT+TGG | + | chr3.2:51416284-51416303 | MS.gene05662:intron | 40.0% |
| ! | TTTTGGATGTCACAATGGGA+TGG | + | chr3.2:51413127-51413146 | MS.gene05662:intron | 40.0% |
| !! | GATAACTGTGTATGGACTAG+GGG | + | chr3.2:51415545-51415564 | MS.gene05662:intron | 40.0% |
| !! | GCCAAGATAACGGAAAAGAA+CGG | + | chr3.2:51414574-51414593 | MS.gene05662:intron | 40.0% |
| !! | GTACGAGACTTTGAAGCATA+AGG | - | chr3.2:51415506-51415525 | None:intergenic | 40.0% |
| !! | TGAGCCATTTTCCCCTTAAT+GGG | - | chr3.2:51413316-51413335 | None:intergenic | 40.0% |
| !! | TTGAGCCATTTTCCCCTTAA+TGG | - | chr3.2:51413317-51413336 | None:intergenic | 40.0% |
| AAACGCTTCAAGCAAAGTCC+TGG | + | chr3.2:51411821-51411840 | MS.gene05662:CDS | 45.0% | |
| AAATTCGATGACTCCCTCGA+AGG | - | chr3.2:51416641-51416660 | None:intergenic | 45.0% | |
| AACACTCCAAAAATGCGTCC+CGG | + | chr3.2:51411979-51411998 | MS.gene05662:CDS | 45.0% | |
| AACCCCCATTAAGGGGAAAA+TGG | + | chr3.2:51413309-51413328 | MS.gene05662:intron | 45.0% | |
| AAGTGGTCTGGTATGTACGA+CGG | + | chr3.2:51412568-51412587 | MS.gene05662:intron | 45.0% | |
| AATTTGGGAGAGCTCCTCTA+AGG | + | chr3.2:51414669-51414688 | MS.gene05662:intron | 45.0% | |
| ACAACCTAACCCCCATTAAG+GGG | + | chr3.2:51413302-51413321 | MS.gene05662:intron | 45.0% | |
| ACCGGTACAGTTACATGAGT+CGG | - | chr3.2:51414088-51414107 | None:intergenic | 45.0% | |
| ACCTTCGGCAACAATGAACT+TGG | - | chr3.2:51413766-51413785 | None:intergenic | 45.0% | |
| AGACCAATTCGACTACGATG+GGG | + | chr3.2:51415034-51415053 | MS.gene05662:intron | 45.0% | |
| AGGAGCTCTCCCAAATTGTA+AGG | - | chr3.2:51414666-51414685 | None:intergenic | 45.0% | |
| AGTGCAACGAGATCAACATG+AGG | + | chr3.2:51414880-51414899 | MS.gene05662:intron | 45.0% | |
| AGTTACAGTCCATGGTTCGT+GGG | + | chr3.2:51414915-51414934 | MS.gene05662:intron | 45.0% | |
| CCAACAAACACACTACCGTT+AGG | + | chr3.2:51416086-51416105 | MS.gene05662:CDS | 45.0% | |
| CCTAACGGTAGTGTGTTTGT+TGG | - | chr3.2:51416089-51416108 | None:intergenic | 45.0% | |
| CGAAAATCACTTGAGCATGG+TGG | - | chr3.2:51414396-51414415 | None:intergenic | 45.0% | |
| CGGCAACAATGAACTTGGAA+GGG | - | chr3.2:51413761-51413780 | None:intergenic | 45.0% | |
| CGTGTAGGAAATAGGAATGG+AGG | + | chr3.2:51415353-51415372 | MS.gene05662:intron | 45.0% | |
| CGTGTATGTCTATCTTGAGG+GGG | + | chr3.2:51415128-51415147 | MS.gene05662:intron | 45.0% | |
| GACCGTGTAGGAAATAGGAA+TGG | + | chr3.2:51415350-51415369 | MS.gene05662:intron | 45.0% | |
| GAGCTCTCCCAAATTGTAAG+GGG | - | chr3.2:51414664-51414683 | None:intergenic | 45.0% | |
| GAGGGACCAAAAAGTAAGTC+AGG | - | chr3.2:51416243-51416262 | None:intergenic | 45.0% | |
| GAGGTGAAAGATGGTGTCTA+TGG | - | chr3.2:51414448-51414467 | None:intergenic | 45.0% | |
| GCCAGTTGCAAAAAGCTTAG+TGG | + | chr3.2:51412631-51412650 | MS.gene05662:intron | 45.0% | |
| GGAGCTCTCCCAAATTGTAA+GGG | - | chr3.2:51414665-51414684 | None:intergenic | 45.0% | |
| GGTCGAAAATCACTTGAGCA+TGG | - | chr3.2:51414399-51414418 | None:intergenic | 45.0% | |
| GTGCAACGAGATCAACATGA+GGG | + | chr3.2:51414881-51414900 | MS.gene05662:intron | 45.0% | |
| GTGTATGTCTATCTTGAGGG+GGG | + | chr3.2:51415129-51415148 | MS.gene05662:intron | 45.0% | |
| GTTGAAGGCAAAATGGCAAG+TGG | - | chr3.2:51413483-51413502 | None:intergenic | 45.0% | |
| TAAAATGGAAAGGACACCCG+AGG | - | chr3.2:51415678-51415697 | None:intergenic | 45.0% | |
| TAGGGCCAAAAATCTGGATC+AGG | + | chr3.2:51416435-51416454 | MS.gene05662:intron | 45.0% | |
| TCCAAGTTCATTGTTGCCGA+AGG | + | chr3.2:51413762-51413781 | MS.gene05662:CDS | 45.0% | |
| TCGGCAACAATGAACTTGGA+AGG | - | chr3.2:51413762-51413781 | None:intergenic | 45.0% | |
| TGAGAGGTGGCATTTAGCAT+GGG | + | chr3.2:51414354-51414373 | MS.gene05662:intron | 45.0% | |
| TGCAACGAGATCAACATGAG+GGG | + | chr3.2:51414882-51414901 | MS.gene05662:intron | 45.0% | |
| TGGGAAGTAGCAGATAGGTT+GGG | + | chr3.2:51414934-51414953 | MS.gene05662:intron | 45.0% | |
| TGTATGTCTATCTTGAGGGG+GGG | + | chr3.2:51415130-51415149 | MS.gene05662:intron | 45.0% | |
| TTGAGAGGTGGCATTTAGCA+TGG | + | chr3.2:51414353-51414372 | MS.gene05662:intron | 45.0% | |
| TTGTTTGGACCTTAGGCTGT+GGG | + | chr3.2:51417083-51417102 | MS.gene05662:intron | 45.0% | |
| TTTGCTCAGATACCCTTCCT+AGG | + | chr3.2:51414486-51414505 | MS.gene05662:intron | 45.0% | |
| TTTGTTTGGACCTTAGGCTG+TGG | + | chr3.2:51417082-51417101 | MS.gene05662:intron | 45.0% | |
| ! | ACAACTAGCCTCTTCAGATG+GGG | - | chr3.2:51414180-51414199 | None:intergenic | 45.0% |
| ! | AGTGTTCGGCAACCTTTTCT+TGG | + | chr3.2:51415980-51415999 | MS.gene05662:intron | 45.0% |
| ! | CCCACTAAGCTTTTTGCAAC+TGG | - | chr3.2:51412635-51412654 | None:intergenic | 45.0% |
| ! | CTTTTGTGGGTGTGAGAGAA+AGG | + | chr3.2:51411872-51411891 | MS.gene05662:intron | 45.0% |
| ! | GTGGACCTGATCCAGATTTT+TGG | - | chr3.2:51416443-51416462 | None:intergenic | 45.0% |
| ! | GTGTTCGGCAACCTTTTCTT+GGG | + | chr3.2:51415981-51416000 | MS.gene05662:intron | 45.0% |
| ! | GTTTTCAGAGTTTGTGGCGA+CGG | + | chr3.2:51417575-51417594 | MS.gene05662:CDS | 45.0% |
| ! | TATCTCTTCATCGGCTGAAG+TGG | - | chr3.2:51417552-51417571 | None:intergenic | 45.0% |
| ! | TTTTCCCCTTAATGGGGGTT+AGG | - | chr3.2:51413309-51413328 | None:intergenic | 45.0% |
| !! | AGCCATTTTCCCCTTAATGG+GGG | - | chr3.2:51413314-51413333 | None:intergenic | 45.0% |
| !! | AGGAAGGGTATCTGAGCAAA+GGG | - | chr3.2:51414486-51414505 | None:intergenic | 45.0% |
| !! | ATCTTGGCCTTGCTTTCTGA+TGG | - | chr3.2:51414562-51414581 | None:intergenic | 45.0% |
| !! | GAGCCATTTTCCCCTTAATG+GGG | - | chr3.2:51413315-51413334 | None:intergenic | 45.0% |
| !! | GTTGGGTGTTCTGAAGATTC+AGG | - | chr3.2:51413960-51413979 | None:intergenic | 45.0% |
| !! | TAGGAAGGGTATCTGAGCAA+AGG | - | chr3.2:51414487-51414506 | None:intergenic | 45.0% |
| !! | TGTATGGACTAGGGGATGTT+TGG | + | chr3.2:51415553-51415572 | MS.gene05662:intron | 45.0% |
| ACACTCCAAAAATGCGTCCC+GGG | + | chr3.2:51411980-51411999 | MS.gene05662:CDS | 50.0% | |
| ACCTTCAGTAGTTGTGGCCT+TGG | - | chr3.2:51415882-51415901 | None:intergenic | 50.0% | |
| AGTAAATCTTCCAGCTGGCC+CGG | - | chr3.2:51412001-51412020 | None:intergenic | 50.0% | |
| ATCCATCAACACGAGGGAAG+AGG | - | chr3.2:51414529-51414548 | None:intergenic | 50.0% | |
| ATGACTCCCTCGAAGGTCAA+TGG | - | chr3.2:51416634-51416653 | None:intergenic | 50.0% | |
| ATTAAGCCACTGGACCGTGT+AGG | + | chr3.2:51415338-51415357 | MS.gene05662:intron | 50.0% | |
| CACTGGACCGTGTAGGAAAT+AGG | + | chr3.2:51415345-51415364 | MS.gene05662:intron | 50.0% | |
| CAGTTACAGTCCATGGTTCG+TGG | + | chr3.2:51414914-51414933 | MS.gene05662:intron | 50.0% | |
| CCCGACTCATGTAACTGTAC+CGG | + | chr3.2:51414084-51414103 | MS.gene05662:intron | 50.0% | |
| CCGGTACAGTTACATGAGTC+GGG | - | chr3.2:51414087-51414106 | None:intergenic | 50.0% | |
| CTATTTCCTACACGGTCCAG+TGG | - | chr3.2:51415347-51415366 | None:intergenic | 50.0% | |
| CTTCCCCATCGTAGTCGAAT+TGG | - | chr3.2:51415040-51415059 | None:intergenic | 50.0% | |
| CTTGAACTCACATGGAGCAC+CGG | - | chr3.2:51414106-51414125 | None:intergenic | 50.0% | |
| GAGAGGTGGCATTTAGCATG+GGG | + | chr3.2:51414355-51414374 | MS.gene05662:intron | 50.0% | |
| GAGCAAAGGGTAGGGGATAA+TGG | - | chr3.2:51414473-51414492 | None:intergenic | 50.0% | |
| GCTCCGGTTATGTCAGAAAG+AGG | + | chr3.2:51414691-51414710 | MS.gene05662:intron | 50.0% | |
| GGAGCTCATTACACGGAGTT+TGG | - | chr3.2:51415485-51415504 | None:intergenic | 50.0% | |
| GGCCACAACTACTGAAGGTT+TGG | + | chr3.2:51415883-51415902 | MS.gene05662:CDS | 50.0% | |
| GGGAAGTAGCAGATAGGTTG+GGG | + | chr3.2:51414935-51414954 | MS.gene05662:intron | 50.0% | |
| GGGTATCTGAGCAAAGGGTA+GGG | - | chr3.2:51414481-51414500 | None:intergenic | 50.0% | |
| GGTATCTGAGCAAAGGGTAG+GGG | - | chr3.2:51414480-51414499 | None:intergenic | 50.0% | |
| GGTTCAAGCGAAGTCCTGAT+AGG | + | chr3.2:51411792-51411811 | MS.gene05662:CDS | 50.0% | |
| GTGGGAAGTAGCAGATAGGT+TGG | + | chr3.2:51414933-51414952 | MS.gene05662:intron | 50.0% | |
| GTTCGTGGGAAGTAGCAGAT+AGG | + | chr3.2:51414929-51414948 | MS.gene05662:intron | 50.0% | |
| TCCAAGGCCACAACTACTGA+AGG | + | chr3.2:51415878-51415897 | MS.gene05662:CDS | 50.0% | |
| TCCATCAACACGAGGGAAGA+GGG | - | chr3.2:51414528-51414547 | None:intergenic | 50.0% | |
| TGACATAACCGGAGCCTTAG+AGG | - | chr3.2:51414686-51414705 | None:intergenic | 50.0% | |
| TGTTTGGACCTTAGGCTGTG+GGG | + | chr3.2:51417084-51417103 | MS.gene05662:intron | 50.0% | |
| ! | AGCAGATAGGTTGGGGAGAA+TGG | + | chr3.2:51414942-51414961 | MS.gene05662:intron | 50.0% |
| ! | AGGGTATCTGAGCAAAGGGT+AGG | - | chr3.2:51414482-51414501 | None:intergenic | 50.0% |
| ! | CAAAGGGTAGGGGATAATGG+AGG | - | chr3.2:51414470-51414489 | None:intergenic | 50.0% |
| ! | TCAGTAGTTGTGGCCTTGGA+AGG | - | chr3.2:51415878-51415897 | None:intergenic | 50.0% |
| ! | TGTGGCCTTGGAAGGATCTT+CGG | - | chr3.2:51415870-51415889 | None:intergenic | 50.0% |
| !!! | GTTTTTGGCATTCCTCGACG+AGG | + | chr3.2:51417605-51417624 | MS.gene05662:CDS | 50.0% |
| AAGATGGCAAGTCCTCGTCG+AGG | - | chr3.2:51417620-51417639 | None:intergenic | 55.0% | |
| AAGGGGAAGCAGTCCTAGGA+AGG | - | chr3.2:51414502-51414521 | None:intergenic | 55.0% | |
| AGGGGAAGCAGTCCTAGGAA+GGG | - | chr3.2:51414501-51414520 | None:intergenic | 55.0% | |
| ATGGAAAGGACACCCGAGGA+TGG | - | chr3.2:51415674-51415693 | None:intergenic | 55.0% | |
| GGTGGCAGAACACTCCCAAT+TGG | - | chr3.2:51413858-51413877 | None:intergenic | 55.0% | |
| GTAAATCTTCCAGCTGGCCC+GGG | - | chr3.2:51412000-51412019 | None:intergenic | 55.0% | |
| GTTTGGACCTTAGGCTGTGG+GGG | + | chr3.2:51417085-51417104 | MS.gene05662:intron | 55.0% | |
| TCCTAGGACTGCTTCCCCTT+CGG | + | chr3.2:51414502-51414521 | MS.gene05662:intron | 55.0% | |
| TGCTGCGTCACAAGAATGGG+CGG | + | chr3.2:51411771-51411790 | MS.gene05662:CDS | 55.0% | |
| TGGCATCACGTGGGCCAAAA+AGG | + | chr3.2:51412035-51412054 | MS.gene05662:CDS | 55.0% | |
| TTATGCACCCCCACAGCCTA+AGG | - | chr3.2:51417095-51417114 | None:intergenic | 55.0% | |
| ! | CTGCTACTTCCCACGAACCA+TGG | - | chr3.2:51414927-51414946 | None:intergenic | 55.0% |
| ! | TTAGGCTGTGGGGGTGCATA+AGG | + | chr3.2:51417094-51417113 | MS.gene05662:intron | 55.0% |
| !! | AGGGTAGGGGATAATGGAGG+AGG | - | chr3.2:51414467-51414486 | None:intergenic | 55.0% |
| GCCCTCTTCCCTCGTGTTGA+TGG | + | chr3.2:51414524-51414543 | MS.gene05662:intron | 60.0% | |
| ! | GCTGTGGGGGTGCATAAGGT+GGG | + | chr3.2:51417098-51417117 | MS.gene05662:intron | 60.0% |
| !! | GGAGAGCTCCTCTAAGGCTC+CGG | + | chr3.2:51414675-51414694 | MS.gene05662:intron | 60.0% |
| !! | GGCGACGGCAGAGTCGTTTT+TGG | + | chr3.2:51417590-51417609 | MS.gene05662:CDS | 60.0% |
| AAAATGCGTCCCGGGCCAGC+TGG | + | chr3.2:51411988-51412007 | MS.gene05662:CDS | 65.0% | |
| ACACGAGGGAAGAGGGCCGA+AGG | - | chr3.2:51414521-51414540 | None:intergenic | 65.0% | |
| ACGAGGGAAGAGGGCCGAAG+GGG | - | chr3.2:51414519-51414538 | None:intergenic | 65.0% | |
| CACGAGGGAAGAGGGCCGAA+GGG | - | chr3.2:51414520-51414539 | None:intergenic | 65.0% | |
| GCCGAAGGGGAAGCAGTCCT+AGG | - | chr3.2:51414506-51414525 | None:intergenic | 65.0% | |
| ! | GCTGGCCCGGGACGCATTTT+TGG | - | chr3.2:51411988-51412007 | None:intergenic | 65.0% |
| ! | GGCTGTGGGGGTGCATAAGG+TGG | + | chr3.2:51417097-51417116 | MS.gene05662:intron | 65.0% |
| ! | GTGGGGGTGCATAAGGTGGG+AGG | + | chr3.2:51417101-51417120 | MS.gene05662:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 51411770 | 51417647 | 51411770 | ID=MS.gene05662 |
| chr3.2 | mRNA | 51411770 | 51417647 | 51411770 | ID=MS.gene05662.t1;Parent=MS.gene05662 |
| chr3.2 | exon | 51411770 | 51411849 | 51411770 | ID=MS.gene05662.t1.exon1;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51411770 | 51411849 | 51411770 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51411945 | 51412056 | 51411945 | ID=MS.gene05662.t1.exon2;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51411945 | 51412056 | 51411945 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51412518 | 51412577 | 51412518 | ID=MS.gene05662.t1.exon3;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51412518 | 51412577 | 51412518 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51413744 | 51413818 | 51413744 | ID=MS.gene05662.t1.exon4;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51413744 | 51413818 | 51413744 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51413951 | 51414031 | 51413951 | ID=MS.gene05662.t1.exon5;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51413951 | 51414031 | 51413951 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51415860 | 51415934 | 51415860 | ID=MS.gene05662.t1.exon6;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51415860 | 51415934 | 51415860 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51416062 | 51416142 | 51416062 | ID=MS.gene05662.t1.exon7;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51416062 | 51416142 | 51416062 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| chr3.2 | exon | 51417558 | 51417647 | 51417558 | ID=MS.gene05662.t1.exon8;Parent=MS.gene05662.t1 |
| chr3.2 | CDS | 51417558 | 51417647 | 51417558 | ID=cds.MS.gene05662.t1;Parent=MS.gene05662.t1 |
| Gene Sequence |
| Protein sequence |
