AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05677

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05677.t1 MTR_3g460950 80.349 229 19 1 16 218 140 368 3.82e-129 369
MS.gene05677.t1 MTR_3g060330 80.349 229 19 1 16 218 140 368 3.82e-129 369
MS.gene05677.t1 MTR_3g460980 76.419 229 12 2 16 218 126 338 2.36e-118 340
MS.gene05677.t1 MTR_3g060390 76.419 229 12 2 16 218 122 334 2.99e-118 340
MS.gene05677.t1 MTR_8g086000 66.228 228 49 3 18 218 142 368 2.00e-101 298
MS.gene05677.t1 MTR_8g086000 66.228 228 49 3 18 218 185 411 4.18e-101 299
MS.gene05677.t1 MTR_3g112210 60.526 228 62 3 18 218 142 368 2.57e-87 262
MS.gene05677.t1 MTR_8g086010 60.396 202 65 6 31 218 222 422 4.63e-68 214
MS.gene05677.t1 MTR_4g061320 44.444 225 91 5 18 212 150 370 1.93e-54 178
MS.gene05677.t1 MTR_4g061130 44.762 210 101 5 18 214 149 356 1.18e-51 171
MS.gene05677.t1 MTR_8g028720 41.333 225 98 6 18 212 147 367 4.25e-49 164
MS.gene05677.t1 MTR_4g087620 40.541 222 103 4 18 212 165 384 1.03e-48 164
MS.gene05677.t1 MTR_7g078690 40.586 239 106 7 4 212 136 368 1.47e-48 163
MS.gene05677.t1 MTR_8g098845 41.778 225 97 6 18 212 162 382 1.84e-48 163
MS.gene05677.t1 MTR_5g010030 39.910 223 104 5 18 212 151 371 5.95e-47 159
MS.gene05677.t1 MTR_2g021330 35.498 231 110 7 18 212 135 362 4.64e-37 134
MS.gene05677.t1 MTR_8g106960 35.526 228 114 6 18 212 228 455 1.44e-36 135
MS.gene05677.t1 MTR_8g106960 35.526 228 114 6 18 212 228 455 1.68e-36 135
MS.gene05677.t1 MTR_2g021330 35.065 231 111 6 18 212 135 362 1.80e-36 134
MS.gene05677.t1 MTR_5g091680 36.797 231 107 7 18 212 132 359 3.31e-35 129
MS.gene05677.t1 MTR_4g117490 34.632 231 112 6 18 212 135 362 3.77e-35 130
MS.gene05677.t1 MTR_5g091680 36.797 231 107 7 18 212 132 359 3.92e-35 130
MS.gene05677.t1 MTR_4g117490 34.632 231 112 6 18 212 135 362 4.58e-35 130
MS.gene05677.t1 MTR_5g091680 36.797 231 107 7 18 212 132 359 5.33e-35 129
MS.gene05677.t1 MTR_5g091680 36.797 231 107 7 18 212 130 357 5.90e-35 129
MS.gene05677.t1 MTR_3g060350 52.258 155 51 5 22 171 142 278 6.93e-35 125
MS.gene05677.t1 MTR_6g079470 35.065 231 111 6 18 212 199 426 4.56e-33 125
MS.gene05677.t1 MTR_3g089510 35.498 231 110 6 18 212 123 350 1.04e-31 121
MS.gene05677.t1 MTR_3g089510 35.498 231 110 6 18 212 135 362 1.25e-31 121
MS.gene05677.t1 MTR_8g461040 34.632 231 112 6 18 212 136 363 1.01e-30 118
MS.gene05677.t1 MTR_4g087620 67.105 76 24 1 18 93 165 239 1.32e-29 111
MS.gene05677.t1 MTR_2g072840 34.199 231 113 6 18 212 45 272 1.51e-29 115
MS.gene05677.t1 MTR_2g072840 34.632 231 112 7 18 212 135 362 1.61e-29 114
MS.gene05677.t1 MTR_2g072840 34.199 231 113 6 18 212 135 362 2.51e-29 114
MS.gene05677.t1 MTR_5g026960 40.113 177 78 5 18 168 109 283 4.81e-29 112
MS.gene05677.t1 MTR_2g032060 35.556 180 90 5 18 171 111 290 3.00e-27 105
MS.gene05677.t1 MTR_4g007750 35.326 184 94 5 18 176 128 311 2.53e-26 103
MS.gene05677.t1 MTR_4g094430 35.556 180 90 4 18 171 111 290 4.17e-26 102
MS.gene05677.t1 MTR_8g012450 37.640 178 82 5 18 168 109 284 4.67e-25 101
MS.gene05677.t1 MTR_8g071230 35.602 191 93 6 4 168 97 283 6.58e-25 101
MS.gene05677.t1 MTR_8g012450 37.640 178 82 5 18 168 109 284 7.09e-25 101
MS.gene05677.t1 MTR_3g085650 34.000 200 99 4 18 184 524 723 8.93e-25 102
MS.gene05677.t1 MTR_6g080470 36.000 175 88 4 19 169 121 295 1.24e-24 100
MS.gene05677.t1 MTR_8g080190 35.468 203 96 4 16 184 491 692 1.32e-24 101
MS.gene05677.t1 MTR_3g085650 34.000 200 99 4 18 184 524 723 1.46e-24 101
MS.gene05677.t1 MTR_3g085650 34.000 200 99 4 18 184 524 723 1.51e-24 101
MS.gene05677.t1 MTR_4g103810 36.559 186 85 6 18 170 218 403 4.67e-24 99.0
MS.gene05677.t1 MTR_8g461270 34.444 180 92 4 18 171 159 338 6.40e-24 97.8
MS.gene05677.t1 MTR_4g103810 36.559 186 85 6 18 170 328 513 8.38e-24 99.0
MS.gene05677.t1 MTR_8g432510 35.519 183 86 6 18 171 247 426 8.86e-23 95.9
MS.gene05677.t1 MTR_1g075610 33.520 179 94 4 18 171 133 311 2.06e-22 93.2
MS.gene05677.t1 MTR_3g054080 31.016 187 87 5 18 171 122 299 2.36e-22 94.0
MS.gene05677.t1 MTR_7g076030 32.787 183 91 6 18 171 142 321 1.45e-21 91.7
MS.gene05677.t1 MTR_7g076030 32.787 183 91 6 18 171 249 428 3.75e-21 91.3
MS.gene05677.t1 MTR_3g096960 32.143 196 88 4 18 168 133 328 1.74e-20 89.4
MS.gene05677.t1 MTR_7g110060 32.275 189 96 6 18 177 183 368 2.95e-20 88.2
MS.gene05677.t1 MTR_1g086370 31.217 189 98 6 18 177 64 249 3.05e-20 87.0
MS.gene05677.t1 MTR_3g040810 33.889 180 88 6 18 168 145 322 4.19e-20 88.2
MS.gene05677.t1 MTR_3g040520 34.444 180 87 6 18 168 147 324 4.42e-20 88.2
MS.gene05677.t1 MTR_4g109090 33.708 178 88 4 18 167 213 388 5.63e-20 88.2
MS.gene05677.t1 MTR_3g098760 34.078 179 88 4 18 168 205 381 5.75e-20 87.8
MS.gene05677.t1 MTR_2g016490 31.694 183 93 6 18 171 148 327 6.24e-20 87.0
MS.gene05677.t1 MTR_4g109090 35.196 179 86 6 18 168 65 241 7.32e-20 87.8
MS.gene05677.t1 MTR_8g080190 55.128 78 35 0 16 93 491 568 8.30e-20 87.4
MS.gene05677.t1 MTR_1g086370 31.217 189 98 6 18 177 150 335 1.04e-19 86.7
MS.gene05677.t1 MTR_3g085650 34.503 171 79 4 18 155 524 694 1.15e-19 87.0
MS.gene05677.t1 MTR_1g086370 31.217 189 98 6 18 177 183 368 1.54e-19 86.3
MS.gene05677.t1 MTR_5g008860 33.520 179 89 4 18 168 248 424 2.37e-19 86.3
MS.gene05677.t1 MTR_2g083940 31.148 183 94 6 18 171 142 321 2.82e-19 85.1
MS.gene05677.t1 MTR_6g013030 35.263 190 84 8 18 173 218 402 3.93e-19 85.5
MS.gene05677.t1 MTR_7g114300 34.078 179 88 4 18 168 215 391 4.01e-19 85.5
MS.gene05677.t1 MTR_2g083940 31.148 183 94 6 18 171 196 375 4.64e-19 85.1
MS.gene05677.t1 MTR_7g114300 33.889 180 89 4 18 169 215 392 5.27e-19 85.1
MS.gene05677.t1 MTR_7g011800 35.028 177 88 5 18 167 228 404 8.35e-19 84.7
MS.gene05677.t1 MTR_7g114300 34.857 175 84 4 18 164 215 387 8.83e-19 84.0
MS.gene05677.t1 MTR_7g114300 34.857 175 84 4 18 164 215 387 9.87e-19 84.0
MS.gene05677.t1 MTR_2g090405 33.516 182 87 5 18 169 249 426 1.11e-18 84.3
MS.gene05677.t1 MTR_4g078290 32.778 180 87 5 18 167 237 412 2.20e-18 83.6
MS.gene05677.t1 MTR_4g078290 32.778 180 87 5 18 167 237 412 2.29e-18 83.6
MS.gene05677.t1 MTR_2g005620 31.148 183 94 6 18 171 198 377 6.40e-18 81.6
MS.gene05677.t1 MTR_1g084760 29.101 189 102 6 18 177 183 368 7.14e-18 81.6
MS.gene05677.t1 MTR_2g020210 32.768 177 93 6 18 168 210 386 1.04e-17 81.3
MS.gene05677.t1 MTR_2g085200 33.333 174 86 4 18 163 242 413 1.40e-17 81.3
MS.gene05677.t1 MTR_1g081870 31.844 179 92 4 18 168 230 406 2.52e-17 80.5
MS.gene05677.t1 MTR_1g080020 33.113 151 99 2 18 168 116 264 2.53e-17 78.6
MS.gene05677.t1 MTR_7g116390 32.692 156 95 2 18 168 124 274 2.89e-17 79.0
MS.gene05677.t1 MTR_1g098300 51.948 77 36 1 18 93 234 310 3.49e-17 80.1
MS.gene05677.t1 MTR_4g118780 51.948 77 36 1 18 93 212 288 5.10e-17 79.3
MS.gene05677.t1 MTR_8g092290 50.649 77 37 1 18 93 249 325 1.26e-16 78.2
MS.gene05677.t1 MTR_7g110060 31.579 171 85 6 18 159 183 350 3.13e-16 76.6
MS.gene05677.t1 MTR_6g048250 34.483 174 93 7 2 168 112 271 8.84e-16 75.1
MS.gene05677.t1 MTR_6g048250 34.483 174 93 7 2 168 112 271 1.08e-15 75.5
MS.gene05677.t1 MTR_6g048250 34.483 174 93 7 2 168 112 271 1.12e-15 75.5
MS.gene05677.t1 MTR_8g099770 32.759 174 87 4 18 163 198 369 1.21e-15 75.5
MS.gene05677.t1 MTR_6g012990 33.908 174 94 7 2 168 112 271 2.15e-15 74.3
MS.gene05677.t1 MTR_6g012990 31.731 208 118 9 2 202 112 302 2.97e-15 74.3
MS.gene05677.t1 MTR_4g132070 35.099 151 86 5 26 170 207 351 1.69e-14 72.0
MS.gene05677.t1 MTR_6g012980 32.558 172 95 6 4 168 168 325 1.73e-14 72.0
MS.gene05677.t1 MTR_3g099920 31.013 158 90 5 18 168 126 271 1.84e-14 72.0
MS.gene05677.t1 MTR_4g095400 28.571 189 99 5 18 171 190 377 5.06e-14 70.5
MS.gene05677.t1 MTR_5g082700 29.016 193 91 7 19 169 518 706 1.10e-13 69.7
MS.gene05677.t1 MTR_1g026190 34.459 148 91 3 26 170 198 342 1.20e-13 69.7
MS.gene05677.t1 MTR_0028s0170 32.692 156 99 3 18 170 186 338 1.34e-13 69.3
MS.gene05677.t1 MTR_5g092815 34.839 155 81 7 26 170 207 351 7.23e-13 67.0
MS.gene05677.t1 MTR_1g054865 34.228 149 86 5 26 168 277 419 7.27e-13 67.4
MS.gene05677.t1 MTR_1g111180 27.778 216 94 8 18 177 791 1000 1.96e-12 66.2
MS.gene05677.t1 MTR_1g111180 27.778 216 94 8 18 177 790 999 1.99e-12 66.2
MS.gene05677.t1 MTR_7g106730 35.099 151 82 6 26 168 204 346 3.40e-12 65.1
MS.gene05677.t1 MTR_1g096490 34.194 155 82 7 26 170 146 290 4.45e-12 65.1
MS.gene05677.t1 MTR_5g018050 31.034 174 96 8 18 175 121 286 9.82e-12 63.5
MS.gene05677.t1 MTR_5g006560 46.970 66 35 0 18 83 216 281 1.08e-11 63.5
MS.gene05677.t1 MTR_5g018050 31.034 174 96 8 18 175 88 253 1.17e-11 63.2
MS.gene05677.t1 MTR_5g006560 46.970 66 35 0 18 83 250 315 1.47e-11 63.2
MS.gene05677.t1 MTR_1g103270 45.455 66 36 0 18 83 208 273 1.49e-11 63.2
MS.gene05677.t1 MTR_7g106710 33.113 151 85 6 26 168 251 393 1.94e-11 63.2
MS.gene05677.t1 MTR_3g051770 33.333 159 86 7 22 170 196 344 2.11e-11 63.2
MS.gene05677.t1 MTR_8g095440 31.056 161 95 6 18 170 138 290 2.16e-11 62.8
MS.gene05677.t1 MTR_1g055255 33.951 162 77 9 22 168 236 382 2.72e-11 62.8
MS.gene05677.t1 MTR_7g106710 33.113 151 85 6 26 168 251 393 3.00e-11 62.4
MS.gene05677.t1 MTR_8g024590 32.143 168 102 3 4 168 112 270 3.39e-11 62.4
MS.gene05677.t1 MTR_7g106710 33.113 151 85 6 26 168 251 393 3.48e-11 62.4
MS.gene05677.t1 MTR_7g089480 30.357 168 99 6 16 174 251 409 3.62e-11 62.4
MS.gene05677.t1 MTR_7g106710 33.113 151 85 6 26 168 251 393 4.18e-11 62.0
MS.gene05677.t1 MTR_7g092360 27.700 213 122 9 18 217 125 318 4.34e-11 62.0
MS.gene05677.t1 MTR_5g059940 30.636 173 104 7 18 184 232 394 4.61e-11 61.6
MS.gene05677.t1 MTR_8g095440 31.056 161 95 6 18 170 138 290 6.07e-11 61.6
MS.gene05677.t1 MTR_5g060350 29.885 174 104 7 18 184 428 590 9.79e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05677.t1 AT2G18170 63.158 228 56 3 18 218 142 368 2.13e-92 275
MS.gene05677.t1 AT1G10210 61.842 228 59 3 18 218 142 368 6.41e-90 269
MS.gene05677.t1 AT1G10210 61.842 228 59 3 18 218 142 368 6.41e-90 269
MS.gene05677.t1 AT1G10210 61.842 228 59 3 18 218 142 368 6.41e-90 269
MS.gene05677.t1 AT1G59580 60.699 229 60 4 18 217 142 369 7.25e-84 254
MS.gene05677.t1 AT1G59580 60.699 229 60 4 18 217 142 369 7.25e-84 254
MS.gene05677.t1 AT4G36450 60.268 224 57 5 18 213 142 361 4.04e-81 246
MS.gene05677.t1 AT1G07880 43.243 222 92 5 18 209 143 360 1.10e-54 179
MS.gene05677.t1 AT3G45640 42.411 224 95 6 18 211 148 367 1.22e-48 163
MS.gene05677.t1 AT3G59790 39.286 224 107 4 18 214 170 391 1.45e-48 164
MS.gene05677.t1 AT4G11330 41.485 229 90 7 18 211 153 372 9.26e-48 161
MS.gene05677.t1 AT4G01370 40.167 239 107 7 4 212 141 373 2.47e-47 160
MS.gene05677.t1 AT1G01560 41.518 224 97 5 18 211 150 369 2.73e-47 159
MS.gene05677.t1 AT2G43790 39.640 222 105 4 18 212 173 392 3.29e-46 157
MS.gene05677.t1 AT2G46070 36.709 237 118 6 4 212 139 371 3.51e-41 144
MS.gene05677.t1 AT2G46070 36.709 237 118 6 4 212 173 405 4.87e-41 144
MS.gene05677.t1 AT1G01560 44.271 192 76 5 4 168 138 325 8.65e-41 142
MS.gene05677.t1 AT2G01450 35.652 230 111 6 18 212 126 353 2.54e-38 138
MS.gene05677.t1 AT2G01450 35.652 230 111 6 18 212 126 353 2.54e-38 138
MS.gene05677.t1 AT2G01450 35.652 230 111 6 18 212 126 353 2.54e-38 138
MS.gene05677.t1 AT2G01450 35.652 230 111 6 18 212 126 353 2.54e-38 138
MS.gene05677.t1 AT2G46070 41.758 182 76 4 4 158 139 317 2.52e-36 130
MS.gene05677.t1 AT1G73670 34.199 231 113 6 18 212 200 427 9.17e-36 132
MS.gene05677.t1 AT5G19010 35.065 231 111 6 18 212 135 362 1.45e-35 132
MS.gene05677.t1 AT3G14720 36.957 230 108 6 18 212 135 362 1.73e-34 127
MS.gene05677.t1 AT3G14720 36.957 230 108 6 18 212 135 362 1.73e-34 127
MS.gene05677.t1 AT3G14720 36.957 230 108 6 18 212 135 362 4.45e-34 128
MS.gene05677.t1 AT1G18150 35.498 231 110 7 18 212 214 441 9.10e-34 127
MS.gene05677.t1 AT1G18150 35.498 231 110 7 18 212 214 441 9.10e-34 127
MS.gene05677.t1 AT1G18150 35.498 231 110 7 18 212 214 441 9.10e-34 127
MS.gene05677.t1 AT2G42880 36.522 230 109 6 18 212 135 362 5.96e-32 121
MS.gene05677.t1 AT2G42880 36.522 230 109 6 18 212 135 362 8.89e-32 122
MS.gene05677.t1 AT1G53510 35.498 231 110 7 18 212 135 362 3.82e-31 120
MS.gene05677.t1 AT3G18040 34.211 228 117 6 18 212 45 272 1.34e-30 117
MS.gene05677.t1 AT1G01560 60.204 98 36 2 4 101 138 232 1.43e-30 114
MS.gene05677.t1 AT1G01560 60.204 98 36 2 4 101 138 232 1.43e-30 114
MS.gene05677.t1 AT3G18040 34.211 228 117 6 18 212 133 360 3.67e-30 116
MS.gene05677.t1 AT3G18040 34.211 228 117 6 18 212 128 355 4.73e-30 116
MS.gene05677.t1 AT3G18040 34.211 228 117 6 18 212 242 469 8.58e-30 116
MS.gene05677.t1 AT3G18040 34.211 228 117 6 18 212 242 469 1.20e-29 115
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 109 284 1.75e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 109 284 1.80e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 118 293 2.21e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 109 284 2.29e-29 113
MS.gene05677.t1 AT1G07880 65.789 76 25 1 18 93 143 217 2.39e-29 110
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 109 284 2.58e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 118 293 2.98e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 117 292 3.40e-29 113
MS.gene05677.t1 AT4G13020 41.011 178 77 6 18 169 117 292 3.43e-29 113
MS.gene05677.t1 AT3G48750 36.813 182 89 4 18 173 111 292 4.65e-29 110
MS.gene05677.t1 AT4G19110 36.723 177 84 5 18 168 53 227 2.38e-27 107
MS.gene05677.t1 AT4G19110 36.723 177 84 5 18 168 109 283 4.43e-27 107
MS.gene05677.t1 AT4G19110 36.723 177 84 5 18 168 109 283 4.74e-27 107
MS.gene05677.t1 AT5G45430 35.955 178 84 6 18 168 109 283 1.85e-26 106
MS.gene05677.t1 AT5G45430 35.955 178 84 6 18 168 109 283 2.07e-26 106
MS.gene05677.t1 AT2G38620 34.783 184 95 5 18 176 66 249 6.51e-26 101
MS.gene05677.t1 AT2G38620 34.783 184 95 5 18 176 128 311 3.77e-25 100
MS.gene05677.t1 AT1G66750 37.500 176 86 5 19 170 120 295 6.13e-25 100
MS.gene05677.t1 AT1G67580 33.333 216 108 6 18 199 514 727 1.69e-24 101
MS.gene05677.t1 AT1G67580 33.333 216 108 6 18 199 514 727 1.69e-24 101
MS.gene05677.t1 AT3G54180 34.783 184 95 5 18 176 126 309 2.40e-24 98.2
MS.gene05677.t1 AT1G20930 34.078 179 93 4 18 171 131 309 4.74e-24 97.4
MS.gene05677.t1 AT1G73690 31.667 180 91 3 18 169 117 292 5.51e-24 98.6
MS.gene05677.t1 AT1G18040 32.184 174 94 4 19 168 119 292 1.28e-23 97.4
MS.gene05677.t1 AT1G76540 34.637 179 92 5 18 171 129 307 1.36e-23 96.3
MS.gene05677.t1 AT5G63370 32.020 203 99 4 18 184 276 475 3.67e-23 97.1
MS.gene05677.t1 AT5G63370 32.020 203 99 4 18 184 276 475 3.67e-23 97.1
MS.gene05677.t1 AT5G63370 33.158 190 88 4 18 171 410 596 4.04e-23 97.1
MS.gene05677.t1 AT5G63370 33.158 190 88 4 18 171 410 596 4.04e-23 97.1
MS.gene05677.t1 AT5G63370 33.158 190 88 4 18 171 410 596 4.04e-23 97.1
MS.gene05677.t1 AT5G63370 33.158 190 88 4 18 171 410 596 4.04e-23 97.1
MS.gene05677.t1 AT5G63370 33.158 190 88 4 18 171 410 596 4.04e-23 97.1
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 7.50e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.16e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.81e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.81e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.81e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.81e-23 96.3
MS.gene05677.t1 AT5G44290 33.702 181 86 4 18 168 245 421 9.81e-23 96.3
MS.gene05677.t1 AT5G63610 36.548 197 78 7 18 168 138 333 1.79e-22 95.1
MS.gene05677.t1 AT5G10270 34.831 178 89 5 18 168 148 325 2.35e-22 94.7
MS.gene05677.t1 AT4G22940 36.872 179 83 8 18 168 212 388 2.94e-22 94.7
MS.gene05677.t1 AT5G64960 35.393 178 88 5 18 168 95 272 3.20e-22 94.4
MS.gene05677.t1 AT4G22940 36.872 179 83 8 18 168 212 388 3.20e-22 94.4
MS.gene05677.t1 AT5G64960 35.393 178 88 5 18 168 148 325 3.91e-22 94.4
MS.gene05677.t1 AT4G18710 32.787 183 91 6 18 171 148 327 6.96e-21 89.7
MS.gene05677.t1 AT3G61160 31.694 183 93 6 18 171 210 389 1.41e-20 89.4
MS.gene05677.t1 AT4G00720 32.787 183 91 6 18 171 246 425 1.79e-20 89.4
MS.gene05677.t1 AT3G61160 31.694 183 93 6 18 171 217 396 1.90e-20 89.0
MS.gene05677.t1 AT3G61160 31.694 183 93 6 18 171 210 389 1.93e-20 89.0
MS.gene05677.t1 AT5G63370 53.947 76 35 0 18 93 276 351 2.68e-20 88.6
MS.gene05677.t1 AT5G63370 53.947 76 35 0 18 93 410 485 3.35e-20 88.6
MS.gene05677.t1 AT5G63370 53.947 76 35 0 18 93 410 485 3.35e-20 88.6
MS.gene05677.t1 AT1G71530 31.280 211 115 4 18 200 255 463 3.84e-20 88.2
MS.gene05677.t1 AT4G10010 35.556 180 86 4 18 169 264 441 6.10e-20 88.2
MS.gene05677.t1 AT1G71530 31.132 212 116 4 18 201 255 464 6.73e-20 87.8
MS.gene05677.t1 AT4G10010 35.556 180 86 4 18 169 84 261 6.81e-20 87.8
MS.gene05677.t1 AT1G71530 34.857 175 84 4 18 164 255 427 1.17e-19 86.7
MS.gene05677.t1 AT1G57870 32.787 183 91 6 18 171 190 369 1.25e-19 86.7
MS.gene05677.t1 AT1G57870 33.696 184 88 6 18 171 190 369 1.46e-19 86.3
MS.gene05677.t1 AT1G57870 33.696 184 88 6 18 171 190 369 1.46e-19 86.3
MS.gene05677.t1 AT1G57870 33.696 184 88 6 18 171 190 369 1.46e-19 86.3
MS.gene05677.t1 AT2G30980 31.694 183 93 6 18 171 180 359 1.96e-19 85.9
MS.gene05677.t1 AT1G03740 32.086 187 92 5 14 167 312 496 2.12e-19 86.7
MS.gene05677.t1 AT5G14640 30.159 189 100 6 18 177 182 367 2.16e-19 85.9
MS.gene05677.t1 AT5G14640 30.159 189 100 6 18 177 182 367 2.16e-19 85.9
MS.gene05677.t1 AT1G03740 32.086 187 92 5 14 167 312 496 3.77e-19 85.9
MS.gene05677.t1 AT3G01085 32.877 219 100 8 18 199 223 431 4.08e-19 85.5
MS.gene05677.t1 AT1G71530 54.545 77 34 1 18 93 255 331 4.42e-19 84.7
MS.gene05677.t1 AT3G01085 32.877 219 100 8 18 199 223 431 4.66e-19 85.5
MS.gene05677.t1 AT3G01085 32.877 219 100 8 18 199 223 431 4.66e-19 85.5
MS.gene05677.t1 AT1G74330 33.333 180 92 5 18 169 229 408 7.09e-19 85.1
MS.gene05677.t1 AT1G09840 31.746 189 97 6 18 177 64 249 7.84e-19 83.2
MS.gene05677.t1 AT1G06390 31.148 183 94 6 18 171 178 357 8.73e-19 84.3
MS.gene05677.t1 AT1G06390 31.148 183 94 6 18 171 178 357 8.73e-19 84.3
MS.gene05677.t1 AT5G50860 31.667 180 93 4 18 169 222 399 2.58e-18 83.2
MS.gene05677.t1 AT5G50860 31.667 180 93 4 18 169 222 399 2.60e-18 83.2
MS.gene05677.t1 AT3G05840 29.101 189 102 6 18 177 181 366 2.69e-18 82.8
MS.gene05677.t1 AT3G05840 29.101 189 102 6 18 177 181 366 2.69e-18 82.8
MS.gene05677.t1 AT1G33770 57.143 77 32 1 18 93 249 325 3.09e-18 83.2
MS.gene05677.t1 AT3G01090 35.632 174 91 7 2 168 112 271 3.12e-18 82.8
MS.gene05677.t1 AT3G01090 35.632 174 91 7 2 168 112 271 3.12e-18 82.8
MS.gene05677.t1 AT3G01090 35.632 174 91 7 2 168 135 294 3.27e-18 82.8
MS.gene05677.t1 AT1G74330 35.393 178 87 6 18 167 229 406 3.87e-18 82.8
MS.gene05677.t1 AT1G74330 35.393 178 87 6 18 167 229 406 4.07e-18 82.8
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT1G09840 32.632 190 94 6 18 177 191 376 5.22e-18 82.0
MS.gene05677.t1 AT5G26751 29.101 189 102 6 18 177 177 362 5.88e-18 81.6
MS.gene05677.t1 AT5G39420 31.579 209 117 6 18 200 213 421 1.04e-17 81.6
MS.gene05677.t1 AT1G53050 33.333 186 82 7 18 169 242 419 1.38e-17 81.3
MS.gene05677.t1 AT1G53050 33.333 186 82 7 18 169 242 419 1.38e-17 81.3
MS.gene05677.t1 AT2G38620 48.052 77 39 1 18 93 128 204 1.77e-17 79.0
MS.gene05677.t1 AT2G38620 48.052 77 39 1 18 93 128 204 1.77e-17 79.0
MS.gene05677.t1 AT1G18670 50.000 78 37 1 18 93 239 316 2.40e-17 80.5
MS.gene05677.t1 AT1G54610 51.948 77 36 1 18 93 226 302 2.86e-17 80.1
MS.gene05677.t1 AT1G54610 51.948 77 36 1 18 93 226 302 2.86e-17 80.1
MS.gene05677.t1 AT1G54610 51.948 77 36 1 18 93 226 302 2.86e-17 80.1
MS.gene05677.t1 AT1G18670 50.000 78 37 1 18 93 239 316 2.86e-17 80.5
MS.gene05677.t1 AT1G18670 50.000 78 37 1 18 93 239 316 2.91e-17 80.1
MS.gene05677.t1 AT3G29160 35.088 171 90 7 2 165 113 269 1.32e-16 77.8
MS.gene05677.t1 AT3G61160 30.409 171 87 6 18 159 210 377 1.75e-16 77.4
MS.gene05677.t1 AT3G29160 35.088 171 90 7 2 165 113 269 2.11e-16 77.8
MS.gene05677.t1 AT3G29160 35.088 171 90 7 2 165 113 269 2.11e-16 77.8
MS.gene05677.t1 AT4G18710 47.436 78 38 3 18 93 142 218 6.46e-16 74.7
MS.gene05677.t1 AT2G23080 28.947 190 97 6 18 171 135 322 2.69e-15 73.9
MS.gene05677.t1 AT5G39440 33.333 174 94 8 2 168 112 270 2.79e-15 74.3
MS.gene05677.t1 AT3G61160 43.590 78 41 3 18 93 210 286 2.20e-14 71.2
MS.gene05677.t1 AT3G61160 43.590 78 41 3 18 93 217 293 2.81e-14 71.2
MS.gene05677.t1 AT3G05050 45.455 77 41 1 18 93 246 322 2.81e-14 71.6
MS.gene05677.t1 AT3G05050 45.455 77 41 1 18 93 246 322 2.81e-14 71.6
MS.gene05677.t1 AT3G05050 45.455 77 41 1 18 93 246 322 2.81e-14 71.6
MS.gene05677.t1 AT1G76040 34.375 160 75 7 26 170 228 372 3.03e-14 71.2
MS.gene05677.t1 AT1G76040 34.375 160 75 7 26 170 228 372 3.66e-14 71.2
MS.gene05677.t1 AT3G04530 30.061 163 102 6 18 175 121 276 5.61e-14 69.7
MS.gene05677.t1 AT5G67380 28.571 189 99 5 18 171 178 365 7.94e-14 69.7
MS.gene05677.t1 AT5G67380 28.571 189 99 5 18 171 211 398 8.78e-14 69.7
MS.gene05677.t1 AT1G12580 32.075 159 98 5 18 171 152 305 2.39e-13 68.6
MS.gene05677.t1 AT3G17750 27.835 194 90 7 19 168 942 1129 3.05e-13 68.6
MS.gene05677.t1 AT3G49370 31.098 164 95 6 16 170 252 406 3.05e-13 68.6
MS.gene05677.t1 AT1G09600 51.948 77 36 1 18 93 271 347 8.35e-13 67.4
MS.gene05677.t1 AT2G35890 37.736 159 77 8 26 173 248 395 8.49e-13 67.0
MS.gene05677.t1 AT2G35890 37.736 159 77 8 26 173 248 395 8.49e-13 67.0
MS.gene05677.t1 AT4G04700 30.818 159 90 7 22 170 144 292 8.82e-13 67.0
MS.gene05677.t1 AT2G40120 28.125 192 94 5 19 169 376 564 9.55e-13 67.0
MS.gene05677.t1 AT4G04720 32.877 146 92 3 26 168 196 338 9.86e-13 67.0
MS.gene05677.t1 AT4G04720 32.877 146 92 3 26 168 196 338 9.86e-13 67.0
MS.gene05677.t1 AT5G24430 31.098 164 95 6 16 170 253 407 1.04e-12 67.0
MS.gene05677.t1 AT4G09570 34.969 163 86 7 18 170 133 285 1.53e-12 66.2
MS.gene05677.t1 AT1G61950 31.847 157 84 6 26 170 214 359 1.93e-12 66.2
MS.gene05677.t1 AT2G37840 31.410 156 102 3 18 170 118 271 3.21e-12 65.5
MS.gene05677.t1 AT1G12680 30.323 155 89 5 22 168 212 355 4.59e-12 65.1
MS.gene05677.t1 AT1G50700 30.968 155 95 5 22 170 185 333 5.27e-12 64.7
MS.gene05677.t1 AT1G50700 31.373 153 93 5 22 168 185 331 8.11e-12 64.3
MS.gene05677.t1 AT1G50700 31.373 153 93 5 22 168 185 331 9.33e-12 63.9
MS.gene05677.t1 AT1G54510 28.571 196 99 7 16 189 111 287 9.66e-12 63.9
MS.gene05677.t1 AT1G54510 28.571 196 99 7 16 189 111 287 9.66e-12 63.9
MS.gene05677.t1 AT1G54510 28.571 196 99 7 16 189 111 287 9.66e-12 63.9
MS.gene05677.t1 AT1G54510 28.571 196 99 7 16 189 111 287 9.66e-12 63.9
MS.gene05677.t1 AT1G57700 50.633 79 34 2 18 93 254 330 1.05e-11 63.9
MS.gene05677.t1 AT5G19360 32.727 165 87 7 18 170 176 328 1.17e-11 63.9
MS.gene05677.t1 AT5G12180 32.727 165 87 7 18 170 181 333 1.33e-11 63.5
MS.gene05677.t1 AT4G21940 32.215 149 89 5 26 168 218 360 1.46e-11 63.5
MS.gene05677.t1 AT4G21940 32.215 149 89 5 26 168 218 360 1.59e-11 63.5
MS.gene05677.t1 AT3G20410 32.680 153 83 7 26 168 207 349 1.68e-11 63.2
MS.gene05677.t1 AT3G20410 32.680 153 83 7 26 168 207 349 1.68e-11 63.2
MS.gene05677.t1 AT4G21940 32.215 149 89 5 26 168 218 360 1.70e-11 63.2
MS.gene05677.t1 AT5G25110 31.818 198 106 8 2 191 135 311 1.86e-11 63.2
MS.gene05677.t1 AT2G41140 31.481 162 93 6 16 168 233 385 2.09e-11 63.2
MS.gene05677.t1 AT4G14780 45.455 66 36 0 18 83 190 255 2.11e-11 62.8
MS.gene05677.t1 AT4G23650 34.568 162 72 8 26 170 194 338 2.23e-11 62.8
MS.gene05677.t1 AT3G45240 27.215 158 99 3 18 169 223 370 2.35e-11 62.8
MS.gene05677.t1 AT3G45240 27.215 158 99 3 18 169 223 370 2.35e-11 62.8
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.12e-11 62.4
MS.gene05677.t1 AT3G63260 46.970 66 35 0 18 83 217 282 3.15e-11 62.0
MS.gene05677.t1 AT5G10930 32.418 182 96 8 18 191 119 281 3.40e-11 62.4
MS.gene05677.t1 AT4G04740 30.519 154 85 6 26 168 185 327 3.59e-11 62.4
MS.gene05677.t1 AT4G04710 30.409 171 85 8 26 186 142 288 3.65e-11 62.4
MS.gene05677.t1 AT4G04710 30.409 171 85 8 26 186 156 302 3.88e-11 62.4
MS.gene05677.t1 AT3G63260 46.970 66 35 0 18 83 217 282 3.99e-11 62.0

Find 43 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCACATTGATGAAAAT+TGG 0.148851 3.2:-51554367 MS.gene05677:CDS
GATTTGAAGATATGTGATTT+TGG 0.217846 3.2:-51554862 MS.gene05677:CDS
TGTAATAAATCTATGGCTAA+TGG 0.250135 3.2:+51554509 None:intergenic
ATCGATGGAGGTTCCGTAAT+TGG 0.270595 3.2:+51554747 None:intergenic
AAACTGATTATAAGTGTTCT+TGG 0.276779 3.2:-51554644 MS.gene05677:CDS
ATTGGGATAACAAGATGATT+AGG 0.321414 3.2:-51554349 MS.gene05677:CDS
TTGCATAGATCAGCCATATA+TGG 0.351435 3.2:+51554428 None:intergenic
CGAGCAGATTCTCAGGCTTC+AGG 0.357127 3.2:+51554899 None:intergenic
AAGTGTGTCCCCTCTGTATA+AGG 0.363602 3.2:+51554557 None:intergenic
CTATTAGGATGTGCCAATTA+CGG 0.368108 3.2:-51554760 MS.gene05677:CDS
CTGTTATTTCAGTTACTTCA+AGG 0.386124 3.2:-51554961 MS.gene05677:intron
TCTTCACATTGATGAAAATT+GGG 0.390420 3.2:-51554366 MS.gene05677:CDS
AGCACTCCAACATCCATATA+TGG 0.414137 3.2:-51554441 MS.gene05677:CDS
CGAGCTCCAGAGCTTCTATT+AGG 0.418427 3.2:-51554775 MS.gene05677:CDS
TTGGGATAACAAGATGATTA+GGG 0.426294 3.2:-51554348 MS.gene05677:CDS
GCATTGACAAAAGCAGCTTC+AGG 0.435785 3.2:+51554293 None:intergenic
GATTCTCAGGCTTCAGGTCC+TGG 0.436294 3.2:+51554905 None:intergenic
TGGCTAATGGATCTGCTTGT+GGG 0.441286 3.2:+51554522 None:intergenic
TAACCGTCCTCCTCAAGTTC+CGG 0.447732 3.2:-51554393 MS.gene05677:CDS
TAACCGTCCTCCTCAAGTTC+CGG 0.447732 3.2:-51555920 MS.gene05677:intron
GCTCGGGAAAATCAAGTTGA+TGG 0.468796 3.2:-51554835 MS.gene05677:CDS
GCGTTGACGAGCAGATTCTC+AGG 0.472568 3.2:+51554892 None:intergenic
GCACATCCTAATAGAAGCTC+TGG 0.477103 3.2:+51554769 None:intergenic
TCATCAATGTGAAGATTGAC+CGG 0.493486 3.2:+51554374 None:intergenic
TTAACTCAAGATCAGACTCT+TGG 0.514842 3.2:+51554618 None:intergenic
TTCTGCAAATATTCTTCACC+AGG 0.516638 3.2:-51554923 MS.gene05677:CDS
GATCAGCCATATATGGATGT+TGG 0.534012 3.2:+51554435 None:intergenic
ATGGCTAATGGATCTGCTTG+TGG 0.541582 3.2:+51554521 None:intergenic
CTGATCTATGCAATGATCAA+TGG 0.575443 3.2:-51554418 MS.gene05677:CDS
CATATCACTTCCTTATACAG+AGG 0.581429 3.2:-51554567 MS.gene05677:CDS
CTGATCTATGTGATGATCAA+TGG 0.582595 3.2:-51555945 MS.gene05677:CDS
CTGAGTATGTTGTCACGCGC+TGG 0.586534 3.2:-51554801 MS.gene05677:CDS
TGAAGATTGACCGGAACTTG+AGG 0.588250 3.2:+51554383 None:intergenic
TGAAGATTGACCGGAACTTG+AGG 0.588250 3.2:+51555910 None:intergenic
ATATCACTTCCTTATACAGA+GGG 0.594658 3.2:-51554566 MS.gene05677:CDS
AGATGATTAGGGAAATGATG+TGG 0.624256 3.2:-51554337 MS.gene05677:CDS
TGACCGGAACTTGAGGAGGA+CGG 0.634795 3.2:+51554390 None:intergenic
TGACCGGAACTTGAGGAGGA+CGG 0.634795 3.2:+51555917 None:intergenic
ACCCTACGGACCCACATCGA+TGG 0.642034 3.2:+51554732 None:intergenic
AGATTGACCGGAACTTGAGG+AGG 0.650608 3.2:+51554386 None:intergenic
AGATTGACCGGAACTTGAGG+AGG 0.650608 3.2:+51555913 None:intergenic
CTACGGACCCACATCGATGG+AGG 0.666253 3.2:+51554735 None:intergenic
TATCACTTCCTTATACAGAG+GGG 0.765984 3.2:-51554565 MS.gene05677:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAATAATATTACTTC+AGG + chr3.2:51554490-51554509 None:intergenic 15.0%
!!! AAAGAAGTGATTTTTTTAAT+AGG - chr3.2:51554515-51554534 MS.gene05677:CDS 15.0%
!!! AATGTCATTTTTATACATTT+AGG + chr3.2:51554879-51554898 None:intergenic 15.0%
!!! CATTTTTTGTAATAAATCTA+TGG + chr3.2:51555739-51555758 None:intergenic 15.0%
!! AATAGTTAATCCAAAAACTA+AGG - chr3.2:51555641-51555660 MS.gene05677:intron 20.0%
!! AATGTTAAAACTCTATTGTT+TGG + chr3.2:51554971-51554990 None:intergenic 20.0%
!! AATTATTTACGATTGATCAT+GGG + chr3.2:51554796-51554815 None:intergenic 20.0%
!! ATATACTCAATCATAAAGAA+AGG + chr3.2:51555137-51555156 None:intergenic 20.0%
!! TAATTATTTACGATTGATCA+TGG + chr3.2:51554797-51554816 None:intergenic 20.0%
!!! AATAGAGTTTTAACATTCTA+AGG - chr3.2:51554974-51554993 MS.gene05677:intron 20.0%
!!! ATTTGAAGATATGTGATTTT+GGG - chr3.2:51555377-51555396 MS.gene05677:intron 20.0%
! AAACTGATTATAAGTGTTCT+TGG - chr3.2:51555594-51555613 MS.gene05677:intron 25.0%
! AAATGATTAGAGAAATGATG+TGG - chr3.2:51554374-51554393 MS.gene05677:CDS 25.0%
! ATCTATAAAAGTGAAGTTTC+AGG + chr3.2:51555024-51555043 None:intergenic 25.0%
! ATCTTCACATTGATGAAAAT+TGG - chr3.2:51554344-51554363 MS.gene05677:CDS 25.0%
! GGAAAATTGTAGTTCATAAT+AGG + chr3.2:51555108-51555127 None:intergenic 25.0%
! TATGATTAGTAACAAACAGA+AGG + chr3.2:51555255-51555274 None:intergenic 25.0%
! TCTTCACATTGATGAAAATT+GGG - chr3.2:51554345-51554364 MS.gene05677:CDS 25.0%
! TGTAATAAATCTATGGCTAA+TGG + chr3.2:51555732-51555751 None:intergenic 25.0%
!! GATTTGAAGATATGTGATTT+TGG - chr3.2:51555376-51555395 MS.gene05677:intron 25.0%
!!! AGATATTGCTCTTTAAAACT+TGG + chr3.2:51554761-51554780 None:intergenic 25.0%
!!! GAAACTTCACTTTTATAGAT+TGG - chr3.2:51555024-51555043 MS.gene05677:intron 25.0%
ATATCACTTCCTTATACAGA+GGG - chr3.2:51555672-51555691 MS.gene05677:intron 30.0%
ATTGGGATAACAAGATGATT+AGG - chr3.2:51555889-51555908 MS.gene05677:intron 30.0%
CACTTATAATCAGTTTCATC+TGG + chr3.2:51555590-51555609 None:intergenic 30.0%
TTGGGATAACAAGATGATTA+GGG - chr3.2:51555890-51555909 MS.gene05677:intron 30.0%
! AAACTCTATTGTTTGGAGTT+TGG + chr3.2:51554964-51554983 None:intergenic 30.0%
! AATCATAAAGAAAGGTGTAC+GGG + chr3.2:51555129-51555148 None:intergenic 30.0%
! CAATCATAAAGAAAGGTGTA+CGG + chr3.2:51555130-51555149 None:intergenic 30.0%
! GATGCAGTAATTCTTTTAGT+TGG + chr3.2:51555774-51555793 None:intergenic 30.0%
!! ACTTCACTTTTATAGATTGG+AGG - chr3.2:51555027-51555046 MS.gene05677:intron 30.0%
!! ATGATGAATGCCTTAGTTTT+TGG + chr3.2:51555654-51555673 None:intergenic 30.0%
!! CTGTTATTTCAGTTACTTCA+AGG - chr3.2:51555277-51555296 MS.gene05677:intron 30.0%
!! TTTAAAACTTGGTGTCCAAA+GGG + chr3.2:51554750-51554769 None:intergenic 30.0%
ACATTTAGGCTGATCAACAA+TGG + chr3.2:51554865-51554884 None:intergenic 35.0%
AGATGATTAGGGAAATGATG+TGG - chr3.2:51555901-51555920 MS.gene05677:intron 35.0%
AGTATAACCCTTAGCAAAGT+GGG - chr3.2:51554657-51554676 MS.gene05677:intron 35.0%
CATATCACTTCCTTATACAG+AGG - chr3.2:51555671-51555690 MS.gene05677:intron 35.0%
CATTTAGGCTGATCAACAAT+GGG + chr3.2:51554864-51554883 None:intergenic 35.0%
CTATTAGGATGTGCCAATTA+CGG - chr3.2:51555478-51555497 MS.gene05677:intron 35.0%
CTGATCTATGCAATGATCAA+TGG - chr3.2:51555820-51555839 MS.gene05677:intron 35.0%
CTGATCTATGTGATGATCAA+TGG - chr3.2:51554293-51554312 MS.gene05677:CDS 35.0%
TAGTATAACCCTTAGCAAAG+TGG - chr3.2:51554656-51554675 MS.gene05677:intron 35.0%
TATCACTTCCTTATACAGAG+GGG - chr3.2:51555673-51555692 MS.gene05677:intron 35.0%
TCATCAATGTGAAGATTGAC+CGG + chr3.2:51554340-51554359 None:intergenic 35.0%
TTAACTCAAGATCAGACTCT+TGG + chr3.2:51555623-51555642 None:intergenic 35.0%
TTCTGCAAATATTCTTCACC+AGG - chr3.2:51555315-51555334 MS.gene05677:intron 35.0%
TTGCATAGATCAGCCATATA+TGG + chr3.2:51555813-51555832 None:intergenic 35.0%
! ACTTCACATAGTTTGTCTCT+AGG - chr3.2:51554453-51554472 MS.gene05677:CDS 35.0%
!! CTTTAAAACTTGGTGTCCAA+AGG + chr3.2:51554751-51554770 None:intergenic 35.0%
AATCAGTTTCATCTGGTGCA+TGG + chr3.2:51555583-51555602 None:intergenic 40.0%
AGCACTCCAACATCCATATA+TGG - chr3.2:51555797-51555816 MS.gene05677:intron 40.0%
GATCAGCCATATATGGATGT+TGG + chr3.2:51555806-51555825 None:intergenic 40.0%
GTATAACCCTTAGCAAAGTG+GGG - chr3.2:51554658-51554677 MS.gene05677:intron 40.0%
TTGATCGCCATTAATCCCTT+TGG - chr3.2:51554732-51554751 MS.gene05677:intron 40.0%
! GAATTTTTCCCAGCGAAGAT+TGG + chr3.2:51555561-51555580 None:intergenic 40.0%
! TGCATTTTTGCTGAGATGCT+TGG - chr3.2:51555528-51555547 MS.gene05677:intron 40.0%
! TGCTTTCAGGTATAAGGAAG+AGG + chr3.2:51554922-51554941 None:intergenic 40.0%
! TTGGTGTCCAAAGGGATTAA+TGG + chr3.2:51554742-51554761 None:intergenic 40.0%
!! AGAGAGTGCTTTCAGGTATA+AGG + chr3.2:51554928-51554947 None:intergenic 40.0%
!! TATGTGATTTTGGGCTTGCT+CGG - chr3.2:51555386-51555405 MS.gene05677:intron 40.0%
AAGTGTGTCCCCTCTGTATA+AGG + chr3.2:51555684-51555703 None:intergenic 45.0%
AGTGCAACTCTTGCATAGAG+TGG + chr3.2:51554836-51554855 None:intergenic 45.0%
ATCGATGGAGGTTCCGTAAT+TGG + chr3.2:51555494-51555513 None:intergenic 45.0%
CTCAGCAAAAATGCACCCTA+CGG + chr3.2:51555523-51555542 None:intergenic 45.0%
GCAATGACAAAAGCAGCTTC+AGG + chr3.2:51554421-51554440 None:intergenic 45.0%
GCACATCCTAATAGAAGCTC+TGG + chr3.2:51555472-51555491 None:intergenic 45.0%
GTGCAACTCTTGCATAGAGT+GGG + chr3.2:51554835-51554854 None:intergenic 45.0%
TGAAGATTGACCGGAACTTG+AGG + chr3.2:51554331-51554350 None:intergenic 45.0%
TGACAAAAGCAGCTTCAGGA+TGG + chr3.2:51554417-51554436 None:intergenic 45.0%
! ATGGCTAATGGATCTGCTTG+TGG + chr3.2:51555720-51555739 None:intergenic 45.0%
! GCATTGACAAAAGCAGCTTC+AGG + chr3.2:51555948-51555967 None:intergenic 45.0%
! TGGCTAATGGATCTGCTTGT+GGG + chr3.2:51555719-51555738 None:intergenic 45.0%
!! AGTTGTGAGAGAGTGCTTTC+AGG + chr3.2:51554935-51554954 None:intergenic 45.0%
!! ATGTGATTTTGGGCTTGCTC+GGG - chr3.2:51555387-51555406 MS.gene05677:intron 45.0%
!! GCTCGGGAAAATCAAGTTGA+TGG - chr3.2:51555403-51555422 MS.gene05677:intron 45.0%
AGATTGACCGGAACTTGAGG+AGG + chr3.2:51554328-51554347 None:intergenic 50.0%
CCATAGCCCCACTTTGCTAA+GGG + chr3.2:51554667-51554686 None:intergenic 50.0%
CCTTAGCAAAGTGGGGCTAT+GGG - chr3.2:51554665-51554684 MS.gene05677:intron 50.0%
CGAGCTCCAGAGCTTCTATT+AGG - chr3.2:51555463-51555482 MS.gene05677:intron 50.0%
CTTAGCAAAGTGGGGCTATG+GGG - chr3.2:51554666-51554685 MS.gene05677:intron 50.0%
GCAGAAAGCCAATCTTCGCT+GGG - chr3.2:51555550-51555569 MS.gene05677:intron 50.0%
TAACCGTCCTCCTCAAGTTC+CGG - chr3.2:51554318-51554337 MS.gene05677:CDS 50.0%
TACGGAACCTCCATCGATGT+GGG - chr3.2:51555496-51555515 MS.gene05677:intron 50.0%
TTACGGAACCTCCATCGATG+TGG - chr3.2:51555495-51555514 MS.gene05677:intron 50.0%
CCCATAGCCCCACTTTGCTA+AGG + chr3.2:51554668-51554687 None:intergenic 55.0%
CCCTTAGCAAAGTGGGGCTA+TGG - chr3.2:51554664-51554683 MS.gene05677:intron 55.0%
CGAGCAGATTCTCAGGCTTC+AGG + chr3.2:51555342-51555361 None:intergenic 55.0%
CTGAGTATGTTGTCACGCGC+TGG - chr3.2:51555437-51555456 MS.gene05677:intron 55.0%
GATTCTCAGGCTTCAGGTCC+TGG + chr3.2:51555336-51555355 None:intergenic 55.0%
GGCAGAAAGCCAATCTTCGC+TGG - chr3.2:51555549-51555568 MS.gene05677:intron 55.0%
TCCATCGATGTGGGTCCGTA+GGG - chr3.2:51555505-51555524 MS.gene05677:intron 55.0%
TGACCGGAACTTGAGGAGGA+CGG + chr3.2:51554324-51554343 None:intergenic 55.0%
! GCGTTGACGAGCAGATTCTC+AGG + chr3.2:51555349-51555368 None:intergenic 55.0%
ACCCTACGGACCCACATCGA+TGG + chr3.2:51555509-51555528 None:intergenic 60.0%
CTACGGACCCACATCGATGG+AGG + chr3.2:51555506-51555525 None:intergenic 60.0%
CTCCATCGATGTGGGTCCGT+AGG - chr3.2:51555504-51555523 MS.gene05677:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 51554289 51555971 51554289 ID=MS.gene05677
chr3.2 mRNA 51554289 51555971 51554289 ID=MS.gene05677.t1;Parent=MS.gene05677
chr3.2 exon 51555921 51555971 51555921 ID=MS.gene05677.t1.exon1;Parent=MS.gene05677.t1
chr3.2 CDS 51555921 51555971 51555921 ID=cds.MS.gene05677.t1;Parent=MS.gene05677.t1
chr3.2 exon 51554747 51554971 51554747 ID=MS.gene05677.t1.exon2;Parent=MS.gene05677.t1
chr3.2 CDS 51554747 51554971 51554747 ID=cds.MS.gene05677.t1;Parent=MS.gene05677.t1
chr3.2 exon 51554289 51554669 51554289 ID=MS.gene05677.t1.exon3;Parent=MS.gene05677.t1
chr3.2 CDS 51554289 51554669 51554289 ID=cds.MS.gene05677.t1;Parent=MS.gene05677.t1
Gene Sequence

>MS.gene05677

ATGGCTGATCTATGTGATGATCAATGGCGTAACCGTCCTCCTCAAGTTCCGGTCAATCTTCACATTGATGAAAATTGGGATAACAAAATGATTAGAGAAATGATGTGGAATGAGATGCTTCATTACCATCCTGAAGCTGCTTTTGTCATTGCATAGATGTTTCTACTTCACATAGTTTGTCTCTAGGAGAAACTGTTACCTGAAGTAATATTATTTGTTTTGCTACAAAGAAGTGATTTTTTTAATAGGTGTGCAAAAATGAATTTAACTGAATTTACTAATCATTACATAGAATTCAATTAAGATGTTGTATGAATTTACTTCAAAAATGAACTTTTTCTTCGTAAAATTTACAATTGATCAATGTTAGTATAACCCTTAGCAAAGTGGGGCTATGGGGTTAGATATGTGTGCAAGTGTCGATGATTCAATGATTAACTACATTGATCGCCATTAATCCCTTTGGACACCAAGTTTTAAAGAGCAATATCTGCAAAAAGTTTGCCCATGATCAATCGTAAATAATTATGAAAGAATAAGAGTCCCACTCTATGCAAGAGTTGCACTCTATTCCCATTGTTGATCAGCCTAAATGTATAAAAATGACATTACAAAATATTCGACATATTTCCTCTTCCTTATACCTGAAAGCACTCTCTCACAACTACAAATCCAAACTCCAAACAATAGAGTTTTAACATTCTAAGGTTTTTTTTCATGATAAAACTAGCACCTGAAACTTCACTTTTATAGATTGGAGGAGCTAGTGAAGCTGAAGTTAATATAATAAAGTTCTCGTGAAAAGATTCATAAGAACCTATTATGAACTACAATTTTCCCGTACACCTTTCTTTATGATTGAGTATATTGTTGATCAACATTGATAATAGAAATAGTAATCTACAAGTAGAAAGCAATTGACTTATTCTTTATGAGTTTTAAATATTTGCTTATTTAACATATCCTTCTGTTTGTTACTAATCATAAACTGTTATTTCAGTTACTTCAAGGTCTTAATCATCTTCATTCTGCAAATATTCTTCACCAGGACCTGAAGCCTGAGAATCTGCTCGTCAACGCAAATTGTGATTTGAAGATATGTGATTTTGGGCTTGCTCGGGAAAATCAAGTTGATGGTGAGAATATGACTGAGTATGTTGTCACGCGCTGGTATCGAGCTCCAGAGCTTCTATTAGGATGTGCCAATTACGGAACCTCCATCGATGTGGGTCCGTAGGGTGCATTTTTGCTGAGATGCTTGGCAGAAAGCCAATCTTCGCTGGGAAAAATTCCATGCACCAGATGAAACTGATTATAAGTGTTCTTGGAAGCCAAGAGTCTGATCTTGAGTTAATAGTTAATCCAAAAACTAAGGCATTCATCATATCACTTCCTTATACAGAGGGGACACACTTCTCTCAGCTATACCCACAAGCAGATCCATTAGCCATAGATTTATTACAAAAAATGCTTGTGTTTGATCCAACTAAAAGAATTACTGCATCAGAAGCACTCCAACATCCATATATGGCTGATCTATGCAATGATCAATGGCGTAACCGTCCTCCTCAAGTTCCGGTCAATCTTCACATTGATGAAAATTGGGATAACAAGATGATTAGGGAAATGATGTGGAATGAGATGCTTCATTATCATCCTGAAGCTGCTTTTGTCAATGCATAG
Protein sequence

>MS.gene05677.t1

MADLCDDQWRNRPPQVPLLQGLNHLHSANILHQDLKPENLLVNANCDLKICDFGLARENQVDGENMTEYVVTRWYRAPELLLGCANYGTSIDMKLIISVLGSQESDLELIVNPKTKAFIISLPYTEGTHFSQLYPQADPLAIDLLQKMLVFDPTKRITASEALQHPYMADLCNDQWRNRPPQVPVNLHIDENWDNKMIREMMWNEMLHYHPEAAFVNA