AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057464

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057464.t1 MTR_7g013380 83.206 262 44 0 1 262 1 262 2.14e-151 425
MS.gene057464.t1 MTR_4g133300 34.188 234 145 4 26 259 20 244 3.71e-34 124
MS.gene057464.t1 MTR_4g133300 35.673 171 101 5 5 173 81 244 1.48e-19 85.5
MS.gene057464.t1 MTR_4g133470 33.761 234 146 4 26 259 20 244 9.86e-33 120
MS.gene057464.t1 MTR_4g133470 36.257 171 100 5 5 173 81 244 3.73e-19 84.7
MS.gene057464.t1 MTR_3g006125 39.521 167 93 3 99 259 89 253 1.43e-26 104
MS.gene057464.t1 MTR_3g006125 37.805 164 94 3 11 168 87 248 1.89e-23 96.3
MS.gene057464.t1 MTR_1g105955 43.796 137 70 2 118 254 33 162 2.51e-26 102
MS.gene057464.t1 MTR_1g105955 38.462 156 85 4 14 168 17 162 8.43e-22 90.1
MS.gene057464.t1 MTR_3g006185 37.952 166 96 3 99 259 8 171 2.90e-24 96.3
MS.gene057464.t1 MTR_3g006185 35.882 170 102 5 9 173 4 171 5.19e-20 85.1
MS.gene057464.t1 MTR_3g006105 38.554 166 93 4 99 258 8 170 5.62e-24 95.9
MS.gene057464.t1 MTR_3g006105 34.756 164 99 3 11 168 6 167 3.81e-19 83.2
MS.gene057464.t1 MTR_3g006105 45.000 80 43 1 186 265 9 87 4.24e-13 66.6
MS.gene057464.t1 MTR_3g006065 38.411 151 89 3 105 252 7 156 2.80e-23 94.4
MS.gene057464.t1 MTR_3g006065 38.129 139 78 3 32 166 22 156 1.28e-19 84.3
MS.gene057464.t1 MTR_3g006150 37.419 155 93 3 101 252 3 156 3.79e-23 93.2
MS.gene057464.t1 MTR_3g006150 38.849 139 77 3 32 166 22 156 1.35e-21 89.0
MS.gene057464.t1 MTR_8g062700 41.176 136 76 3 117 250 58 191 4.45e-23 99.0
MS.gene057464.t1 MTR_8g062700 38.406 138 81 3 29 164 56 191 4.26e-19 87.4
MS.gene057464.t1 MTR_8g062700 40.860 93 54 1 171 262 25 117 3.65e-14 72.8
MS.gene057464.t1 MTR_8g062700 41.176 136 76 3 117 250 58 191 4.45e-23 99.0
MS.gene057464.t1 MTR_8g062700 38.406 138 81 3 29 164 56 191 4.18e-19 87.4
MS.gene057464.t1 MTR_8g062700 40.860 93 54 1 171 262 25 117 3.69e-14 72.8
MS.gene057464.t1 MTR_1g104960 34.969 163 100 3 99 259 13 171 8.27e-23 92.4
MS.gene057464.t1 MTR_1g104960 31.481 162 105 3 11 170 11 168 7.24e-18 79.3
MS.gene057464.t1 MTR_1g104980 34.568 162 89 3 16 177 2 146 2.83e-21 88.6
MS.gene057464.t1 MTR_1g104980 34.356 163 86 4 102 262 2 145 4.67e-21 87.8
MS.gene057464.t1 MTR_5g036670 36.879 141 79 3 116 251 58 193 1.15e-19 89.0
MS.gene057464.t1 MTR_5g036670 35.461 141 83 3 29 165 57 193 1.17e-16 80.1
MS.gene057464.t1 MTR_5g036670 46.970 66 35 0 201 266 57 122 6.42e-12 66.2
MS.gene057464.t1 MTR_7g013410 33.333 147 91 3 103 249 2 141 2.97e-19 82.0
MS.gene057464.t1 MTR_7g013410 31.973 147 93 3 17 163 2 141 1.04e-18 80.9
MS.gene057464.t1 MTR_6g008970 34.177 158 98 3 95 250 59 212 1.43e-18 85.9
MS.gene057464.t1 MTR_6g008970 32.903 155 94 4 14 164 64 212 3.01e-15 75.9
MS.gene057464.t1 MTR_6g008995 33.553 152 97 2 99 250 37 184 3.27e-18 84.3
MS.gene057464.t1 MTR_6g008995 31.126 151 100 2 14 164 38 184 4.78e-15 75.1
MS.gene057464.t1 MTR_6g008995 39.326 89 50 2 186 272 38 124 9.69e-11 62.0
MS.gene057464.t1 MTR_6g008995 33.594 128 83 1 123 250 2 127 3.66e-15 75.1
MS.gene057464.t1 MTR_6g008995 30.469 128 87 1 37 164 2 127 8.56e-12 65.1
MS.gene057464.t1 MTR_1g104940 43.750 80 43 1 183 262 12 89 3.82e-13 65.1
MS.gene057464.t1 MTR_1g104940 41.237 97 51 2 100 192 15 109 4.87e-13 64.7
MS.gene057464.t1 MTR_1g104937 45.455 77 40 1 186 262 13 87 7.34e-13 63.9
MS.gene057464.t1 MTR_1g104937 44.156 77 41 1 100 176 13 87 1.57e-12 63.2
MS.gene057464.t1 MTR_1g104937 45.679 81 41 2 11 90 10 88 2.07e-12 62.8
MS.gene057464.t1 MTR_1g105960 34.259 108 45 1 116 223 16 97 2.13e-12 62.8
MS.gene057464.t1 MTR_1g105960 43.548 62 35 0 201 262 15 76 6.12e-11 58.5
MS.gene057464.t1 MTR_1g105960 33.333 105 44 2 32 136 18 96 8.27e-11 58.5
MS.gene057464.t1 MTR_1g105010 39.326 89 50 2 95 183 12 96 2.91e-11 60.1
MS.gene057464.t1 MTR_1g105010 42.857 77 42 1 186 262 17 91 5.59e-11 58.9
MS.gene057464.t1 MTR_8g062350 30.000 180 74 6 117 249 27 201 8.67e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057464.t1 AT5G15020 42.222 135 76 2 116 250 67 199 8.01e-22 95.5
MS.gene057464.t1 AT5G15020 35.484 155 92 3 14 166 53 201 9.97e-18 83.6
MS.gene057464.t1 AT5G15020 42.222 135 76 2 116 250 67 199 8.30e-22 95.5
MS.gene057464.t1 AT5G15020 35.484 155 92 3 14 166 53 201 1.03e-17 83.6
MS.gene057464.t1 AT1G24190 37.654 162 95 5 91 250 6 163 1.65e-21 94.7
MS.gene057464.t1 AT1G24190 35.260 173 105 6 3 172 4 172 7.42e-19 86.7
MS.gene057464.t1 AT1G24190 41.975 81 45 1 186 266 15 93 6.36e-11 63.2
MS.gene057464.t1 AT1G24190 37.654 162 95 5 91 250 6 163 1.68e-21 94.4
MS.gene057464.t1 AT1G24190 35.260 173 105 6 3 172 4 172 7.28e-19 86.7
MS.gene057464.t1 AT1G24190 41.975 81 45 1 186 266 15 93 6.42e-11 63.2
MS.gene057464.t1 AT1G24190 37.654 162 95 5 91 250 6 163 1.92e-21 94.4
MS.gene057464.t1 AT1G24190 35.260 173 105 6 3 172 4 172 8.32e-19 86.7
MS.gene057464.t1 AT1G24190 41.975 81 45 1 186 266 15 93 6.43e-11 63.2
MS.gene057464.t1 AT1G70030 35.032 157 92 4 96 249 8 157 8.24e-21 87.0
MS.gene057464.t1 AT1G70030 36.424 151 90 3 14 163 12 157 1.42e-20 86.3
MS.gene057464.t1 AT1G70060 35.366 164 99 4 90 250 5 164 1.06e-19 89.4
MS.gene057464.t1 AT1G70060 33.939 165 102 4 3 164 4 164 5.81e-18 84.0
MS.gene057464.t1 AT1G70060 35.366 164 99 4 90 250 5 164 1.06e-19 89.4
MS.gene057464.t1 AT1G70060 33.939 165 102 4 3 164 4 164 5.81e-18 84.0
MS.gene057464.t1 AT3G01320 30.918 207 135 4 47 249 2 204 9.80e-19 86.3
MS.gene057464.t1 AT3G01320 30.531 226 140 7 14 232 58 273 1.18e-18 86.3
MS.gene057464.t1 AT3G01320 51.786 56 27 0 201 256 71 126 2.20e-11 64.7
MS.gene057464.t1 AT3G01320 30.918 207 135 4 47 249 2 204 1.04e-18 86.3
MS.gene057464.t1 AT3G01320 30.357 224 143 6 14 232 58 273 1.18e-18 86.3
MS.gene057464.t1 AT3G01320 51.786 56 27 0 201 256 71 126 2.24e-11 64.7
MS.gene057464.t1 AT1G59890 34.328 134 86 1 117 250 61 192 2.72e-18 85.1
MS.gene057464.t1 AT1G59890 33.582 134 87 1 31 164 61 192 5.43e-16 78.2
MS.gene057464.t1 AT1G59890 34.328 134 86 1 117 250 61 192 2.89e-18 85.1
MS.gene057464.t1 AT1G59890 33.582 134 87 1 31 164 61 192 5.70e-16 78.2
MS.gene057464.t1 AT1G59890 34.328 134 86 1 117 250 61 192 2.91e-18 85.1
MS.gene057464.t1 AT1G59890 33.582 134 87 1 31 164 61 192 5.75e-16 78.2
MS.gene057464.t1 AT1G59890 34.328 134 86 1 117 250 61 192 2.96e-18 85.1
MS.gene057464.t1 AT1G59890 33.582 134 87 1 31 164 61 192 5.74e-16 78.2
MS.gene057464.t1 AT1G24230 25.410 244 153 6 3 241 4 223 1.80e-17 80.1
MS.gene057464.t1 AT1G24230 27.545 167 105 4 95 261 10 160 4.77e-13 67.8
MS.gene057464.t1 AT1G10450 34.307 137 88 1 117 253 100 234 2.53e-17 82.0
MS.gene057464.t1 AT1G10450 32.051 156 103 2 31 186 100 252 6.75e-16 77.8
MS.gene057464.t1 AT1G10450 34.307 137 88 1 117 253 49 183 2.53e-17 82.0
MS.gene057464.t1 AT1G10450 32.051 156 103 2 31 186 49 201 6.15e-16 78.2
MS.gene057464.t1 AT1G10450 34.307 137 88 1 117 253 49 183 2.53e-17 82.0
MS.gene057464.t1 AT1G10450 32.051 156 103 2 31 186 49 201 6.15e-16 78.2
MS.gene057464.t1 AT1G24200 31.169 154 101 4 96 249 11 159 1.18e-14 71.2
MS.gene057464.t1 AT1G24200 28.313 166 109 6 1 163 1 159 9.13e-11 60.5
MS.gene057464.t1 AT1G70030 28.662 157 70 4 96 249 19 136 1.48e-11 61.2
MS.gene057464.t1 AT1G70030 35.922 103 59 3 96 195 19 117 3.63e-11 59.7
MS.gene057464.t1 AT5G35610 42.647 68 39 0 201 268 24 91 8.32e-11 59.7

Find 47 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACAATTTCACGTTAAAT+TGG 0.277062 7.2:+83879900 MS.gene057464:CDS
ATAGATTTATTCAAGTTAAC+AGG 0.306329 7.2:+83878879 MS.gene057464:CDS
AACATCATTGACAAATTCTT+TGG 0.313079 7.2:-83879572 None:intergenic
TAGAATTGATGATGCAAATC+TGG 0.365588 7.2:+83879777 MS.gene057464:intron
TAACTTTCTGAATGTCTTGA+AGG 0.368309 7.2:+83879280 MS.gene057464:CDS
AGAACATTGTGACGTCAAAA+AGG 0.380889 7.2:+83878829 MS.gene057464:CDS
ATCTGAGGAGGAACAATCTC+TGG 0.416325 7.2:+83879172 MS.gene057464:CDS
AGTAGTTCAATCTTGATATA+AGG 0.418112 7.2:-83879474 None:intergenic
TAACTTTCTGAATGTGTTGA+AGG 0.435901 7.2:+83879636 MS.gene057464:CDS
AAGGGATTATTTGAAGGTCA+TGG 0.456386 7.2:+83879092 MS.gene057464:CDS
AACTTCATTGACGAATTCCT+TGG 0.476864 7.2:-83878852 None:intergenic
GAATCTTGGTGAATTATTGA+AGG 0.480427 7.2:+83879429 MS.gene057464:CDS
AGGATTGACGCTGCGAATCT+TGG 0.486810 7.2:+83879415 MS.gene057464:intron
AGCTTGATTTCAAATCCATC+AGG 0.489510 7.2:-83879146 None:intergenic
AAATCTCAGTAAATTCTTGA+AGG 0.490603 7.2:+83879073 MS.gene057464:CDS
TTCTTGAAGGGATTATTTGA+AGG 0.491097 7.2:+83879086 MS.gene057464:CDS
AGCTTGATTTCATATCCATC+AGG 0.493606 7.2:-83879865 None:intergenic
AGCTTGATTTCAAATCCATC+GGG 0.513708 7.2:-83879502 None:intergenic
TTATTGAAGGGATTATTTCA+AGG 0.513778 7.2:+83879442 MS.gene057464:CDS
ATAATGAAGAAAATATTTGA+AGG 0.513952 7.2:+83879805 MS.gene057464:CDS
AATCTTGGTGAATTATTGAA+GGG 0.514858 7.2:+83879430 MS.gene057464:CDS
TTGAACTACTTCATGCCTGA+TGG 0.515459 7.2:+83879131 MS.gene057464:CDS
AATCTCAGTAAATTCTTGAA+GGG 0.520509 7.2:+83879074 MS.gene057464:CDS
TGAAATCAAGCTTCCATTGG+AGG 0.531076 7.2:+83879876 MS.gene057464:CDS
AAGCTTGATTTCAAATCCAT+CGG 0.533316 7.2:-83879503 None:intergenic
AGAGATTCTTCCTCCTCCGA+TGG 0.538054 7.2:-83879526 None:intergenic
TTAAACTACTTCCTACCTGA+TGG 0.558050 7.2:+83879850 MS.gene057464:CDS
TGAAATTGTTCCTCCTCCAA+TGG 0.571267 7.2:-83879889 None:intergenic
AATCAAGCTTCCATCGGAGG+AGG 0.577026 7.2:+83879516 MS.gene057464:CDS
ATATGAAATCAAGCTTCCAT+TGG 0.577817 7.2:+83879873 MS.gene057464:CDS
TTGAACTACTTCATGCCCGA+TGG 0.579628 7.2:+83879487 MS.gene057464:CDS
ATTTATTCAAGTTAATCAGA+GGG 0.582516 7.2:+83879603 MS.gene057464:CDS
TGATGCATTACAAGAAACAA+AGG 0.583155 7.2:+83878933 MS.gene057464:CDS
GATTTATTCAAGTTAGTCAG+AGG 0.584190 7.2:+83879246 MS.gene057464:CDS
TGAAATCAAGCTTCCATCGG+AGG 0.587204 7.2:+83879513 MS.gene057464:CDS
GATTTATTCAAGTTAATCAG+AGG 0.587296 7.2:+83879602 MS.gene057464:CDS
TGAAATCAAGCTTCTATCTG+AGG 0.589635 7.2:+83879157 MS.gene057464:CDS
GATTTATTCAAGTTAACAGG+AGG 0.594070 7.2:+83878882 MS.gene057464:CDS
TGAAGGATTACAAGAGACAA+AGG 0.594478 7.2:+83879653 MS.gene057464:CDS
ATTTATTCAAGTTAGTCAGA+GGG 0.601158 7.2:+83879247 MS.gene057464:CDS
AATCAAGCTTCCATTGGAGG+AGG 0.611644 7.2:+83879879 MS.gene057464:CDS
GGGCAACCCGTGATAATGGA+AGG 0.616033 7.2:+83878797 None:intergenic
ATTTATTCAAGTTAACAGGA+GGG 0.617938 7.2:+83878883 MS.gene057464:CDS
ATTTGAAATCAAGCTTCCAT+CGG 0.624462 7.2:+83879510 MS.gene057464:CDS
TGATTTCATATCCATCAGGT+AGG 0.626891 7.2:-83879861 None:intergenic
AATCAAGCTTCTATCTGAGG+AGG 0.631110 7.2:+83879160 MS.gene057464:CDS
TGAAGGATTACAAAACACAA+AGG 0.632152 7.2:+83879297 MS.gene057464:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATATAATAAAAAAATAG+TGG - chr7.2:83879338-83879357 None:intergenic 10.0%
!!! TTTTTTATTATATTGTGAAA+TGG + chr7.2:83879342-83879361 MS.gene057464:intron 10.0%
!! ATAATGAAGAAAATATTTGA+AGG + chr7.2:83879805-83879824 MS.gene057464:CDS 15.0%
!! CATTACAATAAAAAAAATAG+TGG - chr7.2:83878974-83878993 None:intergenic 15.0%
!! GCAATATAATAAAAAAATAG+TGG - chr7.2:83879694-83879713 None:intergenic 15.0%
!!! TTTTTTATTATATTGCGAAA+TGG + chr7.2:83879698-83879717 MS.gene057464:intron 15.0%
!! ATTCTACAAAATATACCAAA+TGG - chr7.2:83879763-83879782 None:intergenic 20.0%
!!! AACTAATTTATCTATCCTTT+TGG + chr7.2:83879026-83879045 MS.gene057464:intron 20.0%
!!! ATAGATTTATTCAAGTTAAC+AGG + chr7.2:83878879-83878898 MS.gene057464:CDS 20.0%
!!! ATTTATTCAAGTTAATCAGA+GGG + chr7.2:83879603-83879622 MS.gene057464:CDS 20.0%
!!! TATTAATTTGTCTATCCATT+TGG + chr7.2:83879745-83879764 MS.gene057464:intron 20.0%
!!! TGGATTCTATTAATTTTTGT+TGG + chr7.2:83879718-83879737 MS.gene057464:intron 20.0%
! AAATCTCAGTAAATTCTTGA+AGG + chr7.2:83879073-83879092 MS.gene057464:CDS 25.0%
! AACATCATTGACAAATTCTT+TGG - chr7.2:83879219-83879238 None:intergenic 25.0%
! AATCTCAGTAAATTCTTGAA+GGG + chr7.2:83879074-83879093 MS.gene057464:CDS 25.0%
! AATCTTGGTGAATTATTGAA+GGG + chr7.2:83879430-83879449 MS.gene057464:CDS 25.0%
! AGTAGTTCAATCTTGATATA+AGG - chr7.2:83879121-83879140 None:intergenic 25.0%
! ATCCTACAAAATATACCAAA+AGG - chr7.2:83879044-83879063 None:intergenic 25.0%
! TTATTGAAGGGATTATTTCA+AGG + chr7.2:83879442-83879461 MS.gene057464:CDS 25.0%
!! ATCCTTTTGGTATATTTTGT+AGG + chr7.2:83879039-83879058 MS.gene057464:intron 25.0%
!! ATTTATTCAAGTTAACAGGA+GGG + chr7.2:83878883-83878902 MS.gene057464:CDS 25.0%
!! ATTTATTCAAGTTAGTCAGA+GGG + chr7.2:83879247-83879266 MS.gene057464:CDS 25.0%
!! GATTTATTCAAGTTAATCAG+AGG + chr7.2:83879602-83879621 MS.gene057464:CDS 25.0%
AAGCTTGATTTCAAATCCAT+CGG - chr7.2:83879150-83879169 None:intergenic 30.0%
ATATGAAATCAAGCTTCCAT+TGG + chr7.2:83879873-83879892 MS.gene057464:CDS 30.0%
GAATCTTGGTGAATTATTGA+AGG + chr7.2:83879429-83879448 MS.gene057464:CDS 30.0%
GGAACAATTTCACGTTAAAT+TGG + chr7.2:83879900-83879919 MS.gene057464:CDS 30.0%
TAACTTTCTGAATGTCTTGA+AGG + chr7.2:83879280-83879299 MS.gene057464:CDS 30.0%
TAACTTTCTGAATGTGTTGA+AGG + chr7.2:83879636-83879655 MS.gene057464:CDS 30.0%
TGAAGGATTACAAAACACAA+AGG + chr7.2:83879297-83879316 MS.gene057464:CDS 30.0%
TGATGCATTACAAGAAACAA+AGG + chr7.2:83878933-83878952 MS.gene057464:CDS 30.0%
TTCTTGAAGGGATTATTTGA+AGG + chr7.2:83879086-83879105 MS.gene057464:CDS 30.0%
! ATTTGAAATCAAGCTTCCAT+CGG + chr7.2:83879510-83879529 MS.gene057464:CDS 30.0%
! GACAAATTCTTTCGCATTTT+TGG - chr7.2:83879210-83879229 None:intergenic 30.0%
! GATTTATTCAAGTTAACAGG+AGG + chr7.2:83878882-83878901 MS.gene057464:CDS 30.0%
! GATTTATTCAAGTTAGTCAG+AGG + chr7.2:83879246-83879265 MS.gene057464:CDS 30.0%
!! TAGAATTGATGATGCAAATC+TGG + chr7.2:83879777-83879796 MS.gene057464:intron 30.0%
AACTTCATTGACGAATTCCT+TGG - chr7.2:83878855-83878874 None:intergenic 35.0%
AAGGGATTATTTGAAGGTCA+TGG + chr7.2:83879092-83879111 MS.gene057464:CDS 35.0%
AGAACATTGTGACGTCAAAA+AGG + chr7.2:83878829-83878848 MS.gene057464:CDS 35.0%
AGCTTGATTTCAAATCCATC+AGG - chr7.2:83879149-83879168 None:intergenic 35.0%
AGCTTGATTTCAAATCCATC+GGG - chr7.2:83879149-83879168 None:intergenic 35.0%
AGCTTGATTTCATATCCATC+AGG - chr7.2:83879868-83879887 None:intergenic 35.0%
TGAAATCAAGCTTCTATCTG+AGG + chr7.2:83879157-83879176 MS.gene057464:CDS 35.0%
TGAAGGATTACAAGAGACAA+AGG + chr7.2:83879653-83879672 MS.gene057464:CDS 35.0%
TGATTTCATATCCATCAGGT+AGG - chr7.2:83879864-83879883 None:intergenic 35.0%
TTAAACTACTTCCTACCTGA+TGG + chr7.2:83879850-83879869 MS.gene057464:CDS 35.0%
AATCAAGCTTCTATCTGAGG+AGG + chr7.2:83879160-83879179 MS.gene057464:CDS 40.0%
TGAAATCAAGCTTCCATTGG+AGG + chr7.2:83879876-83879895 MS.gene057464:CDS 40.0%
TGAAATTGTTCCTCCTCCAA+TGG - chr7.2:83879892-83879911 None:intergenic 40.0%
TTGAACTACTTCATGCCTGA+TGG + chr7.2:83879131-83879150 MS.gene057464:CDS 40.0%
AATCAAGCTTCCATTGGAGG+AGG + chr7.2:83879879-83879898 MS.gene057464:CDS 45.0%
ATCTGAGGAGGAACAATCTC+TGG + chr7.2:83879172-83879191 MS.gene057464:CDS 45.0%
TGAAATCAAGCTTCCATCGG+AGG + chr7.2:83879513-83879532 MS.gene057464:CDS 45.0%
TTGAACTACTTCATGCCCGA+TGG + chr7.2:83879487-83879506 MS.gene057464:CDS 45.0%
TTGTGACGTCAAAAAGGCCA+AGG + chr7.2:83878835-83878854 MS.gene057464:CDS 45.0%
!!! ATTTTTTTATTATATTTTGT+AGG + chr7.2:83879395-83879414 MS.gene057464:intron 5.0%
AATCAAGCTTCCATCGGAGG+AGG + chr7.2:83879516-83879535 MS.gene057464:CDS 50.0%
AGAGATTCTTCCTCCTCCGA+TGG - chr7.2:83879529-83879548 None:intergenic 50.0%
AGGATTGACGCTGCGAATCT+TGG + chr7.2:83879415-83879434 MS.gene057464:intron 50.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 83878812 83879942 83878812 ID=MS.gene057464
chr7.2 mRNA 83878812 83879942 83878812 ID=MS.gene057464.t1;Parent=MS.gene057464
chr7.2 exon 83878812 83878954 83878812 ID=MS.gene057464.t1.exon1;Parent=MS.gene057464.t1
chr7.2 CDS 83878812 83878954 83878812 ID=cds.MS.gene057464.t1;Parent=MS.gene057464.t1
chr7.2 exon 83879061 83879318 83879061 ID=MS.gene057464.t1.exon2;Parent=MS.gene057464.t1
chr7.2 CDS 83879061 83879318 83879061 ID=cds.MS.gene057464.t1;Parent=MS.gene057464.t1
chr7.2 exon 83879417 83879674 83879417 ID=MS.gene057464.t1.exon3;Parent=MS.gene057464.t1
chr7.2 CDS 83879417 83879674 83879417 ID=cds.MS.gene057464.t1;Parent=MS.gene057464.t1
chr7.2 exon 83879780 83879942 83879780 ID=MS.gene057464.t1.exon4;Parent=MS.gene057464.t1
chr7.2 CDS 83879780 83879942 83879780 ID=cds.MS.gene057464.t1;Parent=MS.gene057464.t1
Gene Sequence

>MS.gene057464

ATGGAAGGACATTCTCAAGAACATTGTGACGTCAAAAAGGCCAAGGAATTCGTCAATGAAGTTAAGCATAGATTTATTCAAGTTAACAGGAGGGATAAGTATGATGACTTTTTGAATGTCTTGATGCATTACAAGAAACAAAGGTTTGATCATGTGTGACCACTATTTTTTTTATTGTAATGTTAGATTGATTTTATTAAATATTGTTGATTGTAACTAATTTATCTATCCTTTTGGTATATTTTGTAGGATCGATGATGCAAATCTCAGTAAATTCTTGAAGGGATTATTTGAAGGTCATGGAGATCTTATATCAAGATTGAACTACTTCATGCCTGATGGATTTGAAATCAAGCTTCTATCTGAGGAGGAACAATCTCTGGAGCATTTTGTAGCCAAAAATGCGAAAGAATTTGTCAATGATGTTAAGTGTAGATTTATTCAAGTTAGTCAGAGGGATAAGTATGATAACTTTCTGAATGTCTTGAAGGATTACAAAACACAAAGGTTTGATCATTTGTGACCACTATTTTTTTATTATATTGTGAAATGGATTTTTATTTATTATTGTTGATTGTAACTAATTTTTTTATTATATTTTGTAGGATTGACGCTGCGAATCTTGGTGAATTATTGAAGGGATTATTTCAAGGTCATAGAGACCTTATATCAAGATTGAACTACTTCATGCCCGATGGATTTGAAATCAAGCTTCCATCGGAGGAGGAAGAATCTCTTGAACATTCTGAAGAAAAAACTGCCAAAGAATTTGTCAATGATGTTAAGTGTAGATTTATTCAAGTTAATCAGAGGGAAAAGTATGTTAACTTTCTGAATGTGTTGAAGGATTACAAGAGACAAAGGTTTGATCATTTGTGACCACTATTTTTTTATTATATTGCGAAATGGATTCTATTAATTTTTGTTGGTTGTTATTAATTTGTCTATCCATTTGGTATATTTTGTAGAATTGATGATGCAAATCTGGTTAAAATAATGAAGAAAATATTTGAAGGTCATAGCGATTTAATATCAAGATTAAACTACTTCCTACCTGATGGATATGAAATCAAGCTTCCATTGGAGGAGGAACAATTTCACGTTAAATTGGAAGATGCTACAAGTTCTTGA
Protein sequence

>MS.gene057464.t1

MEGHSQEHCDVKKAKEFVNEVKHRFIQVNRRDKYDDFLNVLMHYKKQRIDDANLSKFLKGLFEGHGDLISRLNYFMPDGFEIKLLSEEEQSLEHFVAKNAKEFVNDVKCRFIQVSQRDKYDNFLNVLKDYKTQRIDAANLGELLKGLFQGHRDLISRLNYFMPDGFEIKLPSEEEESLEHSEEKTAKEFVNDVKCRFIQVNQREKYVNFLNVLKDYKRQRIDDANLVKIMKKIFEGHSDLISRLNYFLPDGYEIKLPLEEEQFHVKLEDATSS