Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057922.t1 | XP_013459055.1 | 90.6 | 393 | 25 | 2 | 1 | 381 | 1 | 393 | 1.00E-195 | 692.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057922.t1 | Q8AVN9 | 23.8 | 252 | 138 | 5 | 118 | 369 | 227 | 424 | 1.2e-11 | 72.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057922.t1 | A0A072UVJ5 | 90.6 | 393 | 25 | 2 | 1 | 381 | 1 | 393 | 7.5e-196 | 692.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene057922.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057922.t1 | MTR_3g023750 | 93.915 | 378 | 16 | 1 | 11 | 381 | 16 | 393 | 0.0 | 719 |
| MS.gene057922.t1 | MTR_5g097950 | 68.559 | 229 | 69 | 1 | 156 | 381 | 268 | 496 | 1.41e-102 | 312 |
| MS.gene057922.t1 | MTR_5g097950 | 81.897 | 116 | 21 | 0 | 75 | 190 | 37 | 152 | 6.20e-57 | 194 |
| MS.gene057922.t1 | MTR_5g097950 | 31.839 | 223 | 111 | 8 | 161 | 375 | 209 | 398 | 8.62e-15 | 75.9 |
| MS.gene057922.t1 | MTR_5g097950 | 29.921 | 127 | 67 | 3 | 115 | 220 | 363 | 488 | 5.30e-11 | 64.3 |
| MS.gene057922.t1 | MTR_5g097950 | 68.559 | 229 | 69 | 1 | 156 | 381 | 304 | 532 | 2.73e-102 | 312 |
| MS.gene057922.t1 | MTR_5g097950 | 81.897 | 116 | 21 | 0 | 75 | 190 | 73 | 188 | 1.06e-56 | 194 |
| MS.gene057922.t1 | MTR_5g097950 | 31.839 | 223 | 111 | 8 | 161 | 375 | 245 | 434 | 6.67e-15 | 76.6 |
| MS.gene057922.t1 | MTR_5g097950 | 29.457 | 129 | 69 | 3 | 113 | 220 | 397 | 524 | 4.85e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 146 | 308 | 7.79e-22 | 98.2 |
| MS.gene057922.t1 | AT5G61190 | 25.000 | 288 | 155 | 10 | 119 | 371 | 148 | 409 | 8.73e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 195 | 411 | 3.38e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 146 | 308 | 7.79e-22 | 98.2 |
| MS.gene057922.t1 | AT5G61190 | 25.000 | 288 | 155 | 10 | 119 | 371 | 148 | 409 | 8.73e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 195 | 411 | 3.38e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 8.17e-22 | 98.2 |
| MS.gene057922.t1 | AT5G61190 | 25.000 | 288 | 155 | 10 | 119 | 371 | 242 | 503 | 7.48e-13 | 70.9 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 2.90e-12 | 68.9 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 8.20e-22 | 98.2 |
| MS.gene057922.t1 | AT5G61190 | 25.357 | 280 | 156 | 9 | 119 | 371 | 242 | 495 | 6.25e-14 | 73.9 |
| MS.gene057922.t1 | AT5G61190 | 24.537 | 216 | 113 | 6 | 112 | 284 | 289 | 497 | 2.84e-13 | 72.0 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 1.04e-21 | 97.8 |
| MS.gene057922.t1 | AT5G61190 | 25.000 | 288 | 155 | 10 | 119 | 371 | 242 | 503 | 7.75e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 3.56e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 1.07e-21 | 97.8 |
| MS.gene057922.t1 | AT5G61190 | 23.509 | 285 | 163 | 8 | 119 | 371 | 242 | 503 | 9.40e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 3.51e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 1.09e-21 | 97.8 |
| MS.gene057922.t1 | AT5G61190 | 23.509 | 285 | 163 | 8 | 119 | 371 | 242 | 503 | 9.82e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 3.57e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 1.12e-21 | 97.8 |
| MS.gene057922.t1 | AT5G61190 | 25.000 | 288 | 155 | 10 | 119 | 371 | 242 | 503 | 9.43e-13 | 70.5 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 3.92e-12 | 68.6 |
| MS.gene057922.t1 | AT5G61190 | 31.937 | 191 | 102 | 5 | 189 | 379 | 240 | 402 | 1.78e-21 | 97.1 |
| MS.gene057922.t1 | AT5G61190 | 23.509 | 285 | 163 | 8 | 119 | 371 | 242 | 503 | 9.62e-13 | 70.1 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.63e-12 | 68.2 |
| MS.gene057922.t1 | AT5G61190 | 31.414 | 191 | 103 | 4 | 189 | 379 | 240 | 402 | 2.05e-21 | 96.7 |
| MS.gene057922.t1 | AT5G61190 | 23.509 | 285 | 163 | 8 | 119 | 371 | 242 | 503 | 1.00e-12 | 70.1 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.37e-12 | 68.2 |
| MS.gene057922.t1 | AT5G61190 | 31.414 | 191 | 103 | 4 | 189 | 379 | 240 | 402 | 2.05e-21 | 96.7 |
| MS.gene057922.t1 | AT5G61190 | 23.509 | 285 | 163 | 8 | 119 | 371 | 242 | 503 | 1.00e-12 | 70.1 |
| MS.gene057922.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.37e-12 | 68.2 |
Find 89 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCATAGCAGCATGTTTC+TGG | 0.170828 | 3.3:+15027567 | None:intergenic |
| TCTGATGCCTTCTTTGGTTT+TGG | 0.255884 | 3.3:+15027716 | None:intergenic |
| TCAAGTTCTGATGCCTTCTT+TGG | 0.279559 | 3.3:+15027710 | None:intergenic |
| GCCACCGCCAATACTTTAAT+CGG | 0.330296 | 3.3:-15027767 | MS.gene057922:CDS |
| GCAGAATCAACCTGTTTCTT+AGG | 0.337690 | 3.3:+15029832 | None:intergenic |
| TGGGAGGTGTAAAGAGAAAC+AGG | 0.338861 | 3.3:+15031821 | None:intergenic |
| AACCAACAGATTATCAGAAT+TGG | 0.358398 | 3.3:-15031799 | MS.gene057922:CDS |
| CGCTTGAATTCGGCAATAGA+TGG | 0.359328 | 3.3:+15027977 | None:intergenic |
| AACACCGTTACGCTTGAATT+CGG | 0.361255 | 3.3:+15027967 | None:intergenic |
| AAGCTTTGGTGACTTTGGTT+TGG | 0.371601 | 3.3:+15030046 | None:intergenic |
| CACGCAGAAGGTAAACTTGC+AGG | 0.393751 | 3.3:+15030126 | None:intergenic |
| GCAATCCGAGCCTAAGAAAC+AGG | 0.404268 | 3.3:-15029842 | MS.gene057922:CDS |
| TCTCAAAGCTTTGGTGACTT+TGG | 0.404347 | 3.3:+15030041 | None:intergenic |
| ATACAAGGACAAGCGTTAAT+TGG | 0.404953 | 3.3:-15029877 | MS.gene057922:CDS |
| AGGGTTGTTGTTGTTGCTGC+TGG | 0.409176 | 3.3:+15031921 | None:intergenic |
| TTGTTGCTGCTGGAAATTGT+AGG | 0.411429 | 3.3:+15031931 | None:intergenic |
| ACATGGCCACCACAAATTTA+CGG | 0.411957 | 3.3:-15030096 | MS.gene057922:CDS |
| GCATATATCAAACATCTTGC+TGG | 0.416947 | 3.3:-15029766 | MS.gene057922:CDS |
| CACTTCACATCTCAAAGCTT+TGG | 0.420423 | 3.3:+15030032 | None:intergenic |
| GGAGGATGAAGTGAAGGATC+GGG | 0.426441 | 3.3:+15031884 | None:intergenic |
| ATCGGGGAATGATGAATAGT+AGG | 0.433805 | 3.3:+15031901 | None:intergenic |
| GCAAGATTAATTGTAACAGC+AGG | 0.443520 | 3.3:-15027883 | MS.gene057922:CDS |
| TGGGAGAAAGCACGCTGCTC+AGG | 0.446737 | 3.3:-15029746 | MS.gene057922:intron |
| AATTCTGATAATCTGTTGGT+TGG | 0.449153 | 3.3:+15031801 | None:intergenic |
| GTCTCATTGCCGTAAATTTG+TGG | 0.452046 | 3.3:+15030087 | None:intergenic |
| GTTGCCTTGATGTCTAATAA+TGG | 0.452518 | 3.3:-15028007 | MS.gene057922:CDS |
| TAAAGTATTGGCGGTGGCGG+TGG | 0.459433 | 3.3:+15027772 | None:intergenic |
| ATCAACCTGTTTCTTAGGCT+CGG | 0.472485 | 3.3:+15029837 | None:intergenic |
| GGTGAAAATTGAAAACTGTC+TGG | 0.474169 | 3.3:+15027597 | None:intergenic |
| ATTCTGATAATCTGTTGGTT+GGG | 0.474326 | 3.3:+15031802 | None:intergenic |
| TTGTGGCCCGATTAAAGTAT+TGG | 0.478867 | 3.3:+15027760 | None:intergenic |
| CTTCTAATATTGCAGGCTGT+TGG | 0.480500 | 3.3:-15030174 | MS.gene057922:intron |
| GGCTCGGATTGCTTGACTAC+AGG | 0.482010 | 3.3:+15029853 | None:intergenic |
| TTTGCAAGTGGGTCAGTGCC+AGG | 0.495030 | 3.3:+15031863 | None:intergenic |
| TCGGGGAATGATGAATAGTA+GGG | 0.499824 | 3.3:+15031902 | None:intergenic |
| GAGCTTGATATTGTTGTTGA+GGG | 0.501352 | 3.3:+15031957 | None:intergenic |
| TGAGCTTGATATTGTTGTTG+AGG | 0.506291 | 3.3:+15031956 | None:intergenic |
| TTGGTGACTTTGGTTTGGTT+AGG | 0.506602 | 3.3:+15030051 | None:intergenic |
| CATATATCAAACATCTTGCT+GGG | 0.508931 | 3.3:-15029765 | MS.gene057922:CDS |
| TAAGAAACACTTGAAGAACT+TGG | 0.514681 | 3.3:-15027834 | MS.gene057922:CDS |
| GAAGGAGGAGCTGCAGTTGA+TGG | 0.516170 | 3.3:-15027659 | MS.gene057922:CDS |
| TATCTGATGGGTTCAGATTG+AGG | 0.517150 | 3.3:+15031770 | None:intergenic |
| ATCCAATTCTGATAATCTGT+TGG | 0.517632 | 3.3:+15031797 | None:intergenic |
| TCTTATGAAAGTCACATAGC+TGG | 0.520481 | 3.3:-15029982 | MS.gene057922:CDS |
| GAATTCAAGCGTAACGGTGT+TGG | 0.521387 | 3.3:-15027965 | MS.gene057922:CDS |
| CGATCAACCAAAACCAAAGA+AGG | 0.523246 | 3.3:-15027723 | MS.gene057922:CDS |
| ACATGCTGCTATGGTGAAGA+AGG | 0.523999 | 3.3:-15027561 | MS.gene057922:CDS |
| TTCGCATGAGATGCAATAGT+AGG | 0.525742 | 3.3:+15029922 | None:intergenic |
| CCACCGCCAATACTTTAATC+GGG | 0.529234 | 3.3:-15027766 | MS.gene057922:CDS |
| TGTTGCTGCTGGAAATTGTA+GGG | 0.532481 | 3.3:+15031932 | None:intergenic |
| CTTCTGCGTGGAATGGTACA+TGG | 0.535273 | 3.3:-15030113 | MS.gene057922:CDS |
| AAGAAGGCAGGGTCAGTCAC+TGG | 0.535623 | 3.3:-15027545 | MS.gene057922:CDS |
| AATGCCATTATTAGACATCA+AGG | 0.537375 | 3.3:+15028003 | None:intergenic |
| ATCTACATTACACACTTAGC+TGG | 0.537529 | 3.3:-15027857 | MS.gene057922:CDS |
| GCTGCTATGGTGAAGAAGGC+AGG | 0.537781 | 3.3:-15027557 | MS.gene057922:CDS |
| AGGAGGATGAAGTGAAGGAT+CGG | 0.538657 | 3.3:+15031883 | None:intergenic |
| AAAAGCTGCTAAGAAAATCA+AGG | 0.540668 | 3.3:-15027933 | MS.gene057922:CDS |
| CAGCATGTTTCTGGCCAACA+AGG | 0.542850 | 3.3:+15027576 | None:intergenic |
| ACTTACAAGATCATATCTGA+TGG | 0.547707 | 3.3:+15031757 | None:intergenic |
| AGTTTACCTTCTGCGTGGAA+TGG | 0.550393 | 3.3:-15030120 | MS.gene057922:CDS |
| CAAGATTAATTGTAACAGCA+GGG | 0.550872 | 3.3:-15027882 | MS.gene057922:CDS |
| AAAGATGTTGAATTTGCAAG+TGG | 0.552202 | 3.3:+15031851 | None:intergenic |
| GATCCTTCACTTCATCCTCC+TGG | 0.560778 | 3.3:-15031881 | MS.gene057922:CDS |
| TGGCCCGATTAAAGTATTGG+CGG | 0.561570 | 3.3:+15027763 | None:intergenic |
| CCCGATTAAAGTATTGGCGG+TGG | 0.562704 | 3.3:+15027766 | None:intergenic |
| GATTAAAGTATTGGCGGTGG+CGG | 0.568603 | 3.3:+15027769 | None:intergenic |
| AATTTACGGCAATGAGACTA+CGG | 0.572919 | 3.3:-15030082 | MS.gene057922:CDS |
| GAAACAGGTTGATTCTGCAA+CGG | 0.579888 | 3.3:-15029827 | MS.gene057922:CDS |
| TTGATGTCTAATAATGGCAT+TGG | 0.582144 | 3.3:-15028001 | MS.gene057922:CDS |
| CTGATAATCTGTTGGTTGGG+AGG | 0.583814 | 3.3:+15031805 | None:intergenic |
| GTCAAAGAAACGTAAAGTTG+TGG | 0.587310 | 3.3:-15027681 | MS.gene057922:CDS |
| ATCGGGCCACAAGAAAAGCC+AGG | 0.590094 | 3.3:-15027749 | MS.gene057922:CDS |
| GTGCCAGGAGGATGAAGTGA+AGG | 0.595047 | 3.3:+15031878 | None:intergenic |
| ACTGACACAAGTAGTATACA+AGG | 0.597057 | 3.3:-15029892 | MS.gene057922:CDS |
| TGGCCAGAAACATGCTGCTA+TGG | 0.598112 | 3.3:-15027570 | MS.gene057922:CDS |
| CATGTACCATTCCACGCAGA+AGG | 0.601401 | 3.3:+15030114 | None:intergenic |
| CTGCTATGGTGAAGAAGGCA+GGG | 0.613128 | 3.3:-15027556 | MS.gene057922:CDS |
| TCAAGGTTGCTCAATCTGCA+TGG | 0.613642 | 3.3:-15027916 | MS.gene057922:CDS |
| CTTACAAGATCATATCTGAT+GGG | 0.617080 | 3.3:+15031758 | None:intergenic |
| AAGAAACGTAAAGTTGTGGA+AGG | 0.617548 | 3.3:-15027677 | MS.gene057922:CDS |
| AAGATGTTGAATTTGCAAGT+GGG | 0.632167 | 3.3:+15031852 | None:intergenic |
| AAACGTAAAGTTGTGGAAGG+AGG | 0.636655 | 3.3:-15027674 | MS.gene057922:CDS |
| TCATTGCCGTAAATTTGTGG+TGG | 0.641593 | 3.3:+15030090 | None:intergenic |
| CTGCAAGTTTACCTTCTGCG+TGG | 0.655416 | 3.3:-15030125 | MS.gene057922:CDS |
| GAGGATGAAGTGAAGGATCG+GGG | 0.663139 | 3.3:+15031885 | None:intergenic |
| AATGTGCACTTTATGCAATG+TGG | 0.676620 | 3.3:-15027630 | MS.gene057922:CDS |
| ATTGCCGAATTCAAGCGTAA+CGG | 0.711887 | 3.3:-15027971 | MS.gene057922:CDS |
| GCAAGTGGGTCAGTGCCAGG+AGG | 0.726366 | 3.3:+15031866 | None:intergenic |
| GAGGTGTAAAGAGAAACAGG+AGG | 0.834614 | 3.3:+15031824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAATAAATATCATATG+TGG | - | chr3.3:15031098-15031117 | MS.gene057922:intron | 10.0% |
| !!! | AAAAACAATTTTTAAAAATG+TGG | - | chr3.3:15029082-15029101 | MS.gene057922:intron | 10.0% |
| !! | AAAAGTGAGAATAATAAAAT+AGG | - | chr3.3:15029209-15029228 | MS.gene057922:intron | 15.0% |
| !! | AAAGTGAGAATAATAAAATA+GGG | - | chr3.3:15029210-15029229 | MS.gene057922:intron | 15.0% |
| !! | AATATTAAAAGGATGAAAAT+TGG | - | chr3.3:15029978-15029997 | MS.gene057922:CDS | 15.0% |
| !! | ATACAAGAGAAATATTTAAT+TGG | - | chr3.3:15030906-15030925 | MS.gene057922:intron | 15.0% |
| !! | CATATAATGTAAATAGAATT+GGG | - | chr3.3:15029165-15029184 | MS.gene057922:intron | 15.0% |
| !! | TAATACAAATAATTGTCAAA+TGG | - | chr3.3:15028893-15028912 | MS.gene057922:intron | 15.0% |
| !! | TATAATATCAATTGTTAATC+AGG | - | chr3.3:15030652-15030671 | MS.gene057922:intron | 15.0% |
| !! | TCATATAATGTAAATAGAAT+TGG | - | chr3.3:15029164-15029183 | MS.gene057922:intron | 15.0% |
| !! | TTAATACAAATAATGTCAAA+TGG | - | chr3.3:15028640-15028659 | MS.gene057922:intron | 15.0% |
| !!! | ACTGTTATTTTTATCTTAAT+TGG | - | chr3.3:15030042-15030061 | MS.gene057922:CDS | 15.0% |
| !!! | TTTTATTTTAATGTAAGTCA+TGG | + | chr3.3:15029940-15029959 | None:intergenic | 15.0% |
| !! | AAAAAATACTTGTTTGTTCA+AGG | + | chr3.3:15031248-15031267 | None:intergenic | 20.0% |
| !! | AAATTCAAAACCATAACATA+AGG | + | chr3.3:15029260-15029279 | None:intergenic | 20.0% |
| !! | AATTCAAAACAACAATCAAA+AGG | + | chr3.3:15027781-15027800 | None:intergenic | 20.0% |
| !! | AATTCAAAACCATAACATAA+GGG | + | chr3.3:15029259-15029278 | None:intergenic | 20.0% |
| !! | AGGTTATCTATATATACAAA+TGG | + | chr3.3:15031056-15031075 | None:intergenic | 20.0% |
| !! | ATTCAAAACAACAATCAAAA+GGG | + | chr3.3:15027780-15027799 | None:intergenic | 20.0% |
| !! | ATTTGAAAACTAAGATCAAA+AGG | + | chr3.3:15027959-15027978 | None:intergenic | 20.0% |
| !! | CATTTATTAATTAACTCTGT+AGG | - | chr3.3:15030116-15030135 | MS.gene057922:CDS | 20.0% |
| !! | CTACAGAGTTAATTAATAAA+TGG | + | chr3.3:15030118-15030137 | None:intergenic | 20.0% |
| !! | TTTGAAAACTAAGATCAAAA+GGG | + | chr3.3:15027958-15027977 | None:intergenic | 20.0% |
| !!! | AATTACATTATCCTTTTGTA+AGG | - | chr3.3:15029795-15029814 | MS.gene057922:CDS | 20.0% |
| !!! | ACCAAGTAAAAATAGTTTTT+TGG | - | chr3.3:15031144-15031163 | MS.gene057922:intron | 20.0% |
| !!! | CATAATTAGGGTTTTAAAAT+AGG | - | chr3.3:15028425-15028444 | MS.gene057922:intron | 20.0% |
| !!! | CCAAGTAAAAATAGTTTTTT+GGG | - | chr3.3:15031145-15031164 | MS.gene057922:intron | 20.0% |
| !!! | CTTAATTAGGGTTTTTAAAA+TGG | - | chr3.3:15028189-15028208 | MS.gene057922:intron | 20.0% |
| !!! | GAATAAGTTGAATACAATAA+TGG | + | chr3.3:15030884-15030903 | None:intergenic | 20.0% |
| !!! | GGTTTTTAAAAGTTGAAAAA+AGG | + | chr3.3:15030739-15030758 | None:intergenic | 20.0% |
| !!! | GTTATGGTTTTGAATTTTAT+TGG | - | chr3.3:15029263-15029282 | MS.gene057922:intron | 20.0% |
| !!! | TTTCTTATGTTTTTTCATCT+GGG | - | chr3.3:15027820-15027839 | MS.gene057922:CDS | 20.0% |
| !!! | TTTTCTTATGTTTTTTCATC+TGG | - | chr3.3:15027819-15027838 | MS.gene057922:CDS | 20.0% |
| ! | AACAAAAAAAATGAGCAACT+TGG | + | chr3.3:15031399-15031418 | None:intergenic | 25.0% |
| ! | ACAAAAAAAATGAGCAACTT+GGG | + | chr3.3:15031398-15031417 | None:intergenic | 25.0% |
| ! | ATACAAATAATGTCAAATGG+TGG | - | chr3.3:15028643-15028662 | MS.gene057922:intron | 25.0% |
| ! | CTATATATACAAATGGAGTT+TGG | + | chr3.3:15031049-15031068 | None:intergenic | 25.0% |
| ! | CTTATCTATAGATATACATC+CGG | + | chr3.3:15031340-15031359 | None:intergenic | 25.0% |
| ! | GACAGAACAAGAATATTAAA+AGG | - | chr3.3:15029967-15029986 | MS.gene057922:CDS | 25.0% |
| ! | GTATGAAAATAAGAGAATCA+TGG | + | chr3.3:15030267-15030286 | None:intergenic | 25.0% |
| ! | TAACTGTTCAAATGTTTCAA+AGG | + | chr3.3:15031076-15031095 | None:intergenic | 25.0% |
| ! | TTATCTATAGATATACATCC+GGG | + | chr3.3:15031339-15031358 | None:intergenic | 25.0% |
| !! | AACAACAATAGTCTTTTAGT+AGG | - | chr3.3:15030596-15030615 | MS.gene057922:intron | 25.0% |
| !! | TCATAATTGGGGTTTTTAAA+TGG | - | chr3.3:15028328-15028347 | MS.gene057922:intron | 25.0% |
| !!! | ATGAAATAGTGGATAAGTTT+TGG | - | chr3.3:15028104-15028123 | MS.gene057922:intron | 25.0% |
| !!! | CCCAAAAAACTATTTTTACT+TGG | + | chr3.3:15031148-15031167 | None:intergenic | 25.0% |
| !!! | TCATAGTTAGGGTTTTAAAA+TGG | - | chr3.3:15028232-15028251 | MS.gene057922:intron | 25.0% |
| !!! | TTACATGCATTTTAGCTAAA+TGG | + | chr3.3:15030142-15030161 | None:intergenic | 25.0% |
| !!! | TTCATTTTAACGTAGTTGTT+TGG | - | chr3.3:15027922-15027941 | MS.gene057922:CDS | 25.0% |
| !!! | TTTTAAAATGGACATGATTG+TGG | - | chr3.3:15028201-15028220 | MS.gene057922:intron | 25.0% |
| !!! | TTTTGGGTTCATAATTTTGA+CGG | - | chr3.3:15031161-15031180 | MS.gene057922:intron | 25.0% |
| !!! | TTTTGTTGTTTTACCCTATT+GGG | - | chr3.3:15031412-15031431 | MS.gene057922:intron | 25.0% |
| !!! | TTTTTGTTGTTTTACCCTAT+TGG | - | chr3.3:15031411-15031430 | MS.gene057922:intron | 25.0% |
| AAAAGCTGCTAAGAAAATCA+AGG | - | chr3.3:15031570-15031589 | MS.gene057922:intron | 30.0% | |
| AAAATAAGAGAATCATGGTG+GGG | + | chr3.3:15030262-15030281 | None:intergenic | 30.0% | |
| AAAGATGTTGAATTTGCAAG+TGG | + | chr3.3:15027655-15027674 | None:intergenic | 30.0% | |
| AACAATGAGGACCTTATATA+CGG | - | chr3.3:15031185-15031204 | MS.gene057922:intron | 30.0% | |
| AACACAACACTAAACTCATT+TGG | + | chr3.3:15030411-15030430 | None:intergenic | 30.0% | |
| AACCAACAGATTATCAGAAT+TGG | - | chr3.3:15027704-15027723 | MS.gene057922:CDS | 30.0% | |
| AAGAAGAAGAAACATACAAG+TGG | + | chr3.3:15028832-15028851 | None:intergenic | 30.0% | |
| AAGATGAATGATGATAGTCA+GGG | - | chr3.3:15029109-15029128 | MS.gene057922:intron | 30.0% | |
| AAGATGTTGAATTTGCAAGT+GGG | + | chr3.3:15027654-15027673 | None:intergenic | 30.0% | |
| AATGCCATTATTAGACATCA+AGG | + | chr3.3:15031503-15031522 | None:intergenic | 30.0% | |
| AATGGCGTGATTATCATAAT+TGG | - | chr3.3:15028315-15028334 | MS.gene057922:intron | 30.0% | |
| AATGTGAAGTTCTGTTAAGT+GGG | - | chr3.3:15028153-15028172 | MS.gene057922:intron | 30.0% | |
| AATTCTGATAATCTGTTGGT+TGG | + | chr3.3:15027705-15027724 | None:intergenic | 30.0% | |
| ACTTACAAGATCATATCTGA+TGG | + | chr3.3:15027749-15027768 | None:intergenic | 30.0% | |
| ATAATTCAGGGATAACAGAA+GGG | - | chr3.3:15030680-15030699 | MS.gene057922:intron | 30.0% | |
| ATAGGACAATATGGATATCA+TGG | - | chr3.3:15028980-15028999 | MS.gene057922:intron | 30.0% | |
| ATCCAATTCTGATAATCTGT+TGG | + | chr3.3:15027709-15027728 | None:intergenic | 30.0% | |
| ATGAAGACAAAGGCTATAAA+TGG | - | chr3.3:15030368-15030387 | MS.gene057922:intron | 30.0% | |
| ATGGCGTGATTATCATAATT+GGG | - | chr3.3:15028316-15028335 | MS.gene057922:intron | 30.0% | |
| ATTAGGGTTTGCAAAAGAAA+GGG | - | chr3.3:15028383-15028402 | MS.gene057922:intron | 30.0% | |
| CAAGATTAATTGTAACAGCA+GGG | - | chr3.3:15031621-15031640 | MS.gene057922:intron | 30.0% | |
| CATATATCAAACATCTTGCT+GGG | - | chr3.3:15029738-15029757 | MS.gene057922:intron | 30.0% | |
| CTTACAAGATCATATCTGAT+GGG | + | chr3.3:15027748-15027767 | None:intergenic | 30.0% | |
| GAAAATAAGAGAATCATGGT+GGG | + | chr3.3:15030263-15030282 | None:intergenic | 30.0% | |
| GATATCCATATTGTCCTATT+CGG | + | chr3.3:15028979-15028998 | None:intergenic | 30.0% | |
| GATGTCTAGTTATGAAATAG+TGG | - | chr3.3:15028093-15028112 | MS.gene057922:intron | 30.0% | |
| GTGAGAATAATAAAATAGGG+AGG | - | chr3.3:15029213-15029232 | MS.gene057922:intron | 30.0% | |
| GTTGGAATTCGTCTTAATTA+GGG | - | chr3.3:15028177-15028196 | MS.gene057922:intron | 30.0% | |
| TAAAATGCATGTAAGATAGC+TGG | - | chr3.3:15030148-15030167 | MS.gene057922:CDS | 30.0% | |
| TAAGAAACACTTGAAGAACT+TGG | - | chr3.3:15031669-15031688 | MS.gene057922:intron | 30.0% | |
| TAATGTGAAGTTCTGTTAAG+TGG | - | chr3.3:15028152-15028171 | MS.gene057922:intron | 30.0% | |
| TCAAATCCAAAAATCGATGT+CGG | - | chr3.3:15031700-15031719 | MS.gene057922:intron | 30.0% | |
| TCTTAGAAATTCCATACTTC+CGG | - | chr3.3:15031022-15031041 | MS.gene057922:intron | 30.0% | |
| TGAAAATAAGAGAATCATGG+TGG | + | chr3.3:15030264-15030283 | None:intergenic | 30.0% | |
| TGACGTGATTGTCATAATTA+GGG | - | chr3.3:15028413-15028432 | MS.gene057922:intron | 30.0% | |
| TGATTTGATCCCTTATGTTA+TGG | - | chr3.3:15029247-15029266 | MS.gene057922:intron | 30.0% | |
| TTCAATGCTTCTAATATTGC+AGG | - | chr3.3:15029322-15029341 | MS.gene057922:intron | 30.0% | |
| TTGATGTCTAATAATGGCAT+TGG | - | chr3.3:15031502-15031521 | MS.gene057922:intron | 30.0% | |
| TTTAGTAGGAGTAGATTACA+TGG | - | chr3.3:15030610-15030629 | MS.gene057922:intron | 30.0% | |
| TTTCTTCTTCTTTGTTAACG+TGG | - | chr3.3:15028840-15028859 | MS.gene057922:intron | 30.0% | |
| ! | ATTCTGATAATCTGTTGGTT+GGG | + | chr3.3:15027704-15027723 | None:intergenic | 30.0% |
| ! | GTTTTCAATTTTCACCTTGT+TGG | - | chr3.3:15031913-15031932 | MS.gene057922:CDS | 30.0% |
| !! | AGTATTTTAAGTCGTGATTG+CGG | + | chr3.3:15028564-15028583 | None:intergenic | 30.0% |
| !! | CAACTTTTAAAAACCATTGC+CGG | - | chr3.3:15030744-15030763 | MS.gene057922:intron | 30.0% |
| !! | GGAAATAAAAAGTGTTCTTC+TGG | - | chr3.3:15030343-15030362 | MS.gene057922:intron | 30.0% |
| !! | TATTCGGTGTTTGCAATAAT+GGG | + | chr3.3:15028963-15028982 | None:intergenic | 30.0% |
| !! | TGCAAAATCTAGAGTGATTT+TGG | - | chr3.3:15030233-15030252 | MS.gene057922:intron | 30.0% |
| !! | TTCTTAGCAGCTTTTTGAAA+TGG | + | chr3.3:15031565-15031584 | None:intergenic | 30.0% |
| !! | TTGTTTGTTATCAGTTATCC+CGG | - | chr3.3:15031318-15031337 | MS.gene057922:intron | 30.0% |
| AAACACCGAATAGGACAATA+TGG | - | chr3.3:15028971-15028990 | MS.gene057922:intron | 35.0% | |
| AAGAAACGTAAAGTTGTGGA+AGG | - | chr3.3:15031826-15031845 | MS.gene057922:CDS | 35.0% | |
| AAGACAAAGGCTATAAATGG+AGG | - | chr3.3:15030371-15030390 | MS.gene057922:intron | 35.0% | |
| AATCAGGTCTCCATAATTCA+GGG | - | chr3.3:15030668-15030687 | MS.gene057922:intron | 35.0% | |
| AATGTGCACTTTATGCAATG+TGG | - | chr3.3:15031873-15031892 | MS.gene057922:CDS | 35.0% | |
| AATTTACGGCAATGAGACTA+CGG | - | chr3.3:15029421-15029440 | MS.gene057922:intron | 35.0% | |
| ACTCAGAAACATTCCACTAA+TGG | + | chr3.3:15031453-15031472 | None:intergenic | 35.0% | |
| ACTGACACAAGTAGTATACA+AGG | - | chr3.3:15029611-15029630 | MS.gene057922:intron | 35.0% | |
| AGAACCATGAACAAGAGAAT+AGG | + | chr3.3:15030017-15030036 | None:intergenic | 35.0% | |
| AGACAAAGGCTATAAATGGA+GGG | - | chr3.3:15030372-15030391 | MS.gene057922:intron | 35.0% | |
| ATACAAGGACAAGCGTTAAT+TGG | - | chr3.3:15029626-15029645 | MS.gene057922:intron | 35.0% | |
| ATCTACATTACACACTTAGC+TGG | - | chr3.3:15031646-15031665 | MS.gene057922:intron | 35.0% | |
| ATGAGTTTAGTGTTGTGTTG+CGG | - | chr3.3:15030412-15030431 | MS.gene057922:intron | 35.0% | |
| CATAATTCAGGGATAACAGA+AGG | - | chr3.3:15030679-15030698 | MS.gene057922:intron | 35.0% | |
| CATTATTGCAAACACCGAAT+AGG | - | chr3.3:15028962-15028981 | MS.gene057922:intron | 35.0% | |
| CGTTGGAATTCGTCTTAATT+AGG | - | chr3.3:15028176-15028195 | MS.gene057922:intron | 35.0% | |
| CTTAGAAATTCCATACTTCC+GGG | - | chr3.3:15031023-15031042 | MS.gene057922:intron | 35.0% | |
| CTTCTGTTATCCCTGAATTA+TGG | + | chr3.3:15030681-15030700 | None:intergenic | 35.0% | |
| GAAGATGAATGATGATAGTC+AGG | - | chr3.3:15029108-15029127 | MS.gene057922:intron | 35.0% | |
| GATTAGGGTTTGCAAAAGAA+AGG | - | chr3.3:15028382-15028401 | MS.gene057922:intron | 35.0% | |
| GCAAGATTAATTGTAACAGC+AGG | - | chr3.3:15031620-15031639 | MS.gene057922:intron | 35.0% | |
| GCATATATCAAACATCTTGC+TGG | - | chr3.3:15029737-15029756 | MS.gene057922:intron | 35.0% | |
| GCTATCCATATTGTCCTATT+CGG | + | chr3.3:15028726-15028745 | None:intergenic | 35.0% | |
| GGGTTTAGCTAATTAACTCT+AGG | - | chr3.3:15030092-15030111 | MS.gene057922:CDS | 35.0% | |
| GGTGAAAATTGAAAACTGTC+TGG | + | chr3.3:15031909-15031928 | None:intergenic | 35.0% | |
| GTCAAAGAAACGTAAAGTTG+TGG | - | chr3.3:15031822-15031841 | MS.gene057922:CDS | 35.0% | |
| GTGACGTGATTGTCATAATT+AGG | - | chr3.3:15028412-15028431 | MS.gene057922:intron | 35.0% | |
| GTTGCCTTGATGTCTAATAA+TGG | - | chr3.3:15031496-15031515 | MS.gene057922:intron | 35.0% | |
| TAATCAGGTCTCCATAATTC+AGG | - | chr3.3:15030667-15030686 | MS.gene057922:intron | 35.0% | |
| TAGCTAGACACTACTGAAAT+CGG | + | chr3.3:15030517-15030536 | None:intergenic | 35.0% | |
| TCTTATGAAAGTCACATAGC+TGG | - | chr3.3:15029521-15029540 | MS.gene057922:intron | 35.0% | |
| TGGCGTGATTATCATAATTG+GGG | - | chr3.3:15028317-15028336 | MS.gene057922:intron | 35.0% | |
| TGTACCTATTCTCTTGTTCA+TGG | - | chr3.3:15030010-15030029 | MS.gene057922:CDS | 35.0% | |
| TTAGGGTTTGCAAAAGAAAG+GGG | - | chr3.3:15028384-15028403 | MS.gene057922:intron | 35.0% | |
| TTATCTTAATTGGACCCACA+AGG | - | chr3.3:15030052-15030071 | MS.gene057922:CDS | 35.0% | |
| ! | GAGCTTGATATTGTTGTTGA+GGG | + | chr3.3:15027549-15027568 | None:intergenic | 35.0% |
| ! | TGAGCTTGATATTGTTGTTG+AGG | + | chr3.3:15027550-15027569 | None:intergenic | 35.0% |
| !! | AGAGTATCGTGAAACAATAG+TGG | + | chr3.3:15028618-15028637 | None:intergenic | 35.0% |
| !! | CTATTCGGTGTTGTCAATAA+CGG | + | chr3.3:15028711-15028730 | None:intergenic | 35.0% |
| !! | CTATTCGGTGTTTGCAATAA+TGG | + | chr3.3:15028964-15028983 | None:intergenic | 35.0% |
| !! | TAATTTTGACGGCAACAATG+AGG | - | chr3.3:15031172-15031191 | MS.gene057922:intron | 35.0% |
| !!! | CTATAAATGGAGGGCATTTT+GGG | - | chr3.3:15030381-15030400 | MS.gene057922:intron | 35.0% |
| !!! | CTTCTTTGGTTTTGGTTGAT+CGG | + | chr3.3:15031782-15031801 | None:intergenic | 35.0% |
| AAACGTAAAGTTGTGGAAGG+AGG | - | chr3.3:15031829-15031848 | MS.gene057922:CDS | 40.0% | |
| ACATGGCCACCACAAATTTA+CGG | - | chr3.3:15029407-15029426 | MS.gene057922:intron | 40.0% | |
| AGCTAGACACTACTGAAATC+GGG | + | chr3.3:15030516-15030535 | None:intergenic | 40.0% | |
| ATAACTAGAAGCCAAACTCG+TGG | - | chr3.3:15028767-15028786 | MS.gene057922:intron | 40.0% | |
| ATCCACTGCGAAAAAGTTAC+TGG | - | chr3.3:15030322-15030341 | MS.gene057922:intron | 40.0% | |
| ATCGGGGAATGATGAATAGT+AGG | + | chr3.3:15027605-15027624 | None:intergenic | 40.0% | |
| ATGGAACGATACTGCAATTC+TGG | - | chr3.3:15028347-15028366 | MS.gene057922:intron | 40.0% | |
| ATTACTGTGAGTGTTTCACG+TGG | - | chr3.3:15029013-15029032 | MS.gene057922:intron | 40.0% | |
| ATTGTCTGCGATATAGAGCA+AGG | + | chr3.3:15029857-15029876 | None:intergenic | 40.0% | |
| CAACACCGAATAGGACAATA+TGG | - | chr3.3:15028718-15028737 | MS.gene057922:intron | 40.0% | |
| CACTTCACATCTCAAAGCTT+TGG | + | chr3.3:15029474-15029493 | None:intergenic | 40.0% | |
| CCAGCAATTTGACTATGACA+TGG | - | chr3.3:15030444-15030463 | MS.gene057922:intron | 40.0% | |
| CCATGTCATAGTCAAATTGC+TGG | + | chr3.3:15030447-15030466 | None:intergenic | 40.0% | |
| CGATCAACCAAAACCAAAGA+AGG | - | chr3.3:15031780-15031799 | MS.gene057922:CDS | 40.0% | |
| CGATCTTTCTTGAAAGCTGT+AGG | - | chr3.3:15030836-15030855 | MS.gene057922:intron | 40.0% | |
| CGTGAAACACTCACAGTAAT+AGG | + | chr3.3:15029013-15029032 | None:intergenic | 40.0% | |
| CGTTATTGACAACACCGAAT+AGG | - | chr3.3:15028709-15028728 | MS.gene057922:intron | 40.0% | |
| CTTCTAATATTGCAGGCTGT+TGG | - | chr3.3:15029329-15029348 | MS.gene057922:intron | 40.0% | |
| GACAGCTATCATTTCCTGTA+TGG | + | chr3.3:15031211-15031230 | None:intergenic | 40.0% | |
| GAGCAACTTGGGAAAAATGT+AGG | + | chr3.3:15031387-15031406 | None:intergenic | 40.0% | |
| GCAAATGAAAGGTGAGACAA+TGG | - | chr3.3:15028297-15028316 | MS.gene057922:intron | 40.0% | |
| GCATAATGCACACACTTGTA+TGG | - | chr3.3:15029900-15029919 | MS.gene057922:CDS | 40.0% | |
| GTCTCATTGCCGTAAATTTG+TGG | + | chr3.3:15029419-15029438 | None:intergenic | 40.0% | |
| GTGTTGTCAATAACGGTTTG+CGG | + | chr3.3:15028704-15028723 | None:intergenic | 40.0% | |
| GTTAATGATTGCCACGAGTT+TGG | + | chr3.3:15028781-15028800 | None:intergenic | 40.0% | |
| GTTGCACGAAACCTTACAAA+AGG | + | chr3.3:15029809-15029828 | None:intergenic | 40.0% | |
| TAGCTGGTTATGTGCATGTT+TGG | - | chr3.3:15030164-15030183 | MS.gene057922:intron | 40.0% | |
| TATACAAATGGAGTTTGGCC+CGG | + | chr3.3:15031044-15031063 | None:intergenic | 40.0% | |
| TATACCTCTGTAGTTAGCAG+AGG | + | chr3.3:15030576-15030595 | None:intergenic | 40.0% | |
| TCATTGCCGTAAATTTGTGG+TGG | + | chr3.3:15029416-15029435 | None:intergenic | 40.0% | |
| TCGGGGAATGATGAATAGTA+GGG | + | chr3.3:15027604-15027623 | None:intergenic | 40.0% | |
| TGGCGTGATTGTCATGATTA+GGG | - | chr3.3:15028367-15028386 | MS.gene057922:intron | 40.0% | |
| TGGCGTGATTGTCATGTTTA+GGG | - | chr3.3:15028271-15028290 | MS.gene057922:intron | 40.0% | |
| TGTAGCCACAATCACAGTAT+CGG | + | chr3.3:15028451-15028470 | None:intergenic | 40.0% | |
| TGTTGCTGCTGGAAATTGTA+GGG | + | chr3.3:15027574-15027593 | None:intergenic | 40.0% | |
| TTAGACATCAAGGCAACCTA+CGG | + | chr3.3:15031493-15031512 | None:intergenic | 40.0% | |
| TTCCTGTATGGCCGTATATA+AGG | + | chr3.3:15031199-15031218 | None:intergenic | 40.0% | |
| TTCGCATGAGATGCAATAGT+AGG | + | chr3.3:15029584-15029603 | None:intergenic | 40.0% | |
| TTGTGGCCCGATTAAAGTAT+TGG | + | chr3.3:15031746-15031765 | None:intergenic | 40.0% | |
| TTGTTGCTGCTGGAAATTGT+AGG | + | chr3.3:15027575-15027594 | None:intergenic | 40.0% | |
| ! | AAGCTTTGGTGACTTTGGTT+TGG | + | chr3.3:15029460-15029479 | None:intergenic | 40.0% |
| ! | ATCAACCTGTTTCTTAGGCT+CGG | + | chr3.3:15029669-15029688 | None:intergenic | 40.0% |
| ! | CAAATGGTGGCTTTTGTTAG+TGG | - | chr3.3:15028656-15028675 | MS.gene057922:intron | 40.0% |
| ! | GCAGAATCAACCTGTTTCTT+AGG | + | chr3.3:15029674-15029693 | None:intergenic | 40.0% |
| ! | GTTTAGGGTTCGCAAATGAA+AGG | - | chr3.3:15028286-15028305 | MS.gene057922:intron | 40.0% |
| ! | TCAAGTTCTGATGCCTTCTT+TGG | + | chr3.3:15031796-15031815 | None:intergenic | 40.0% |
| ! | TCTCAAAGCTTTGGTGACTT+TGG | + | chr3.3:15029465-15029484 | None:intergenic | 40.0% |
| ! | TCTTCTGGAGATGAAGACAA+AGG | - | chr3.3:15030358-15030377 | MS.gene057922:intron | 40.0% |
| ! | TTTTTCGCAGTGGATGAGTA+AGG | + | chr3.3:15030317-15030336 | None:intergenic | 40.0% |
| !! | GAAACAGGTTGATTCTGCAA+CGG | - | chr3.3:15029676-15029695 | MS.gene057922:intron | 40.0% |
| !! | TATCTGATGGGTTCAGATTG+AGG | + | chr3.3:15027736-15027755 | None:intergenic | 40.0% |
| !! | TCTGATGCCTTCTTTGGTTT+TGG | + | chr3.3:15031790-15031809 | None:intergenic | 40.0% |
| !! | TTGGTGACTTTGGTTTGGTT+AGG | + | chr3.3:15029455-15029474 | None:intergenic | 40.0% |
| !!! | GCTATAAATGGAGGGCATTT+TGG | - | chr3.3:15030380-15030399 | MS.gene057922:intron | 40.0% |
| !!! | TTCCAGTAACTTTTTCGCAG+TGG | + | chr3.3:15030327-15030346 | None:intergenic | 40.0% |
| AACCTACGGGTCACAAAAAG+TGG | + | chr3.3:15031479-15031498 | None:intergenic | 45.0% | |
| AAGGCAAGATAGGATCACTG+TGG | - | chr3.3:15030071-15030090 | MS.gene057922:CDS | 45.0% | |
| AAGTTCTGTTAAGTGGGCGT+TGG | - | chr3.3:15028159-15028178 | MS.gene057922:intron | 45.0% | |
| ACATGCTGCTATGGTGAAGA+AGG | - | chr3.3:15031942-15031961 | MS.gene057922:CDS | 45.0% | |
| AGAAGATGCTGCTCCAAAAG+GGG | + | chr3.3:15030770-15030789 | None:intergenic | 45.0% | |
| AGGAGGATGAAGTGAAGGAT+CGG | + | chr3.3:15027623-15027642 | None:intergenic | 45.0% | |
| AGGCAAGATAGGATCACTGT+GGG | - | chr3.3:15030072-15030091 | MS.gene057922:CDS | 45.0% | |
| AGTGATCCTATCTTGCCTTG+TGG | + | chr3.3:15030070-15030089 | None:intergenic | 45.0% | |
| AGTTTACCTTCTGCGTGGAA+TGG | - | chr3.3:15029383-15029402 | MS.gene057922:intron | 45.0% | |
| ATAGGCCGATACTGTGATTG+TGG | - | chr3.3:15028443-15028462 | MS.gene057922:intron | 45.0% | |
| ATGGAACGATACCGCAATTG+TGG | - | chr3.3:15028251-15028270 | MS.gene057922:intron | 45.0% | |
| CAGAAGATGCTGCTCCAAAA+GGG | + | chr3.3:15030771-15030790 | None:intergenic | 45.0% | |
| CCACCGCCAATACTTTAATC+GGG | - | chr3.3:15031737-15031756 | MS.gene057922:intron | 45.0% | |
| CGAGTGTGAATGTCTTCATG+TGG | - | chr3.3:15028803-15028822 | MS.gene057922:intron | 45.0% | |
| CTGGCGTGATTGTCATGATT+AGG | - | chr3.3:15028366-15028385 | MS.gene057922:intron | 45.0% | |
| GAAACCAGTGTTGTCAATCG+TGG | + | chr3.3:15031276-15031295 | None:intergenic | 45.0% | |
| GACCTTATATACGGCCATAC+AGG | - | chr3.3:15031194-15031213 | MS.gene057922:intron | 45.0% | |
| GAGGTGTAAAGAGAAACAGG+AGG | + | chr3.3:15027682-15027701 | None:intergenic | 45.0% | |
| GCCACCGCCAATACTTTAAT+CGG | - | chr3.3:15031736-15031755 | MS.gene057922:intron | 45.0% | |
| GCTAGACACTACTGAAATCG+GGG | + | chr3.3:15030515-15030534 | None:intergenic | 45.0% | |
| GTGATCCTATCTTGCCTTGT+GGG | + | chr3.3:15030069-15030088 | None:intergenic | 45.0% | |
| GTGGCGTGATTGTCATGTTT+AGG | - | chr3.3:15028270-15028289 | MS.gene057922:intron | 45.0% | |
| TAGACATCAAGGCAACCTAC+GGG | + | chr3.3:15031492-15031511 | None:intergenic | 45.0% | |
| TCAAGGTTGCTCAATCTGCA+TGG | - | chr3.3:15031587-15031606 | MS.gene057922:intron | 45.0% | |
| TCACCATAGCAGCATGTTTC+TGG | + | chr3.3:15031939-15031958 | None:intergenic | 45.0% | |
| TCAGAAGATGCTGCTCCAAA+AGG | + | chr3.3:15030772-15030791 | None:intergenic | 45.0% | |
| TGACAATCACGCCACAATTG+CGG | + | chr3.3:15028265-15028284 | None:intergenic | 45.0% | |
| ! | CTGAGTTCTGACTTTCACTC+TGG | - | chr3.3:15029292-15029311 | MS.gene057922:intron | 45.0% |
| ! | CTGATAATCTGTTGGTTGGG+AGG | + | chr3.3:15027701-15027720 | None:intergenic | 45.0% |
| ! | TGGGAGGTGTAAAGAGAAAC+AGG | + | chr3.3:15027685-15027704 | None:intergenic | 45.0% |
| ! | TTTTACCCTATTGGGCTGCA+AGG | - | chr3.3:15031420-15031439 | MS.gene057922:intron | 45.0% |
| !! | ATGTGCATGTTTGGTGTCAC+TGG | - | chr3.3:15030173-15030192 | MS.gene057922:intron | 45.0% |
| !! | CTGTAGCGGATATAATGTCG+TGG | + | chr3.3:15030553-15030572 | None:intergenic | 45.0% |
| !! | GATTAAAGTATTGGCGGTGG+CGG | + | chr3.3:15031737-15031756 | None:intergenic | 45.0% |
| !! | TGGCCCGATTAAAGTATTGG+CGG | + | chr3.3:15031743-15031762 | None:intergenic | 45.0% |
| !! | TGTGCATGTTTGGTGTCACT+GGG | - | chr3.3:15030174-15030193 | MS.gene057922:intron | 45.0% |
| !!! | CTAGTGCCGACATCGATTTT+TGG | + | chr3.3:15031709-15031728 | None:intergenic | 45.0% |
| ACAGCCTCTGCTAACTACAG+AGG | - | chr3.3:15030569-15030588 | MS.gene057922:intron | 50.0% | |
| AGATCGTACAAGTCTGTCGC+AGG | + | chr3.3:15030822-15030841 | None:intergenic | 50.0% | |
| CACGCAGAAGGTAAACTTGC+AGG | + | chr3.3:15029380-15029399 | None:intergenic | 50.0% | |
| CATGTACCATTCCACGCAGA+AGG | + | chr3.3:15029392-15029411 | None:intergenic | 50.0% | |
| CGATCCACGATTGACAACAC+TGG | - | chr3.3:15031269-15031288 | MS.gene057922:intron | 50.0% | |
| CTGCAAGTTTACCTTCTGCG+TGG | - | chr3.3:15029378-15029397 | MS.gene057922:intron | 50.0% | |
| CTGCTATGGTGAAGAAGGCA+GGG | - | chr3.3:15031947-15031966 | MS.gene057922:CDS | 50.0% | |
| CTTCTGCGTGGAATGGTACA+TGG | - | chr3.3:15029390-15029409 | MS.gene057922:intron | 50.0% | |
| GAGGATGAAGTGAAGGATCG+GGG | + | chr3.3:15027621-15027640 | None:intergenic | 50.0% | |
| GATCCTTCACTTCATCCTCC+TGG | - | chr3.3:15027622-15027641 | MS.gene057922:CDS | 50.0% | |
| GCAAGGCGTAAAGCCATTAG+TGG | - | chr3.3:15031437-15031456 | MS.gene057922:intron | 50.0% | |
| GCAATCCGAGCCTAAGAAAC+AGG | - | chr3.3:15029661-15029680 | MS.gene057922:intron | 50.0% | |
| GGAGGATGAAGTGAAGGATC+GGG | + | chr3.3:15027622-15027641 | None:intergenic | 50.0% | |
| GGGTTTGCAAAAGAAAGGGG+AGG | - | chr3.3:15028387-15028406 | MS.gene057922:intron | 50.0% | |
| GTAGTTAGCAGAGGCTGTAG+CGG | + | chr3.3:15030567-15030586 | None:intergenic | 50.0% | |
| TGGCCAGAAACATGCTGCTA+TGG | - | chr3.3:15031933-15031952 | MS.gene057922:CDS | 50.0% | |
| TGGCGCGACTGTCATAGTTA+GGG | - | chr3.3:15028221-15028240 | MS.gene057922:intron | 50.0% | |
| TTACGCCTTGCAGCCCAATA+GGG | + | chr3.3:15031428-15031447 | None:intergenic | 50.0% | |
| TTCGATCTCTGCTGCAAACG+AGG | - | chr3.3:15028482-15028501 | MS.gene057922:intron | 50.0% | |
| TTGGACCCACAAGGCAAGAT+AGG | - | chr3.3:15030061-15030080 | MS.gene057922:CDS | 50.0% | |
| TTTACGCCTTGCAGCCCAAT+AGG | + | chr3.3:15031429-15031448 | None:intergenic | 50.0% | |
| ! | AGGGTTGTTGTTGTTGCTGC+TGG | + | chr3.3:15027585-15027604 | None:intergenic | 50.0% |
| !! | CAGCATGTTTCTGGCCAACA+AGG | + | chr3.3:15031930-15031949 | None:intergenic | 50.0% |
| !! | CCCGATTAAAGTATTGGCGG+TGG | + | chr3.3:15031740-15031759 | None:intergenic | 50.0% |
| !!! | GACCACTTTTTGTGACCCGT+AGG | - | chr3.3:15031474-15031493 | MS.gene057922:intron | 50.0% |
| AAGAAGGCAGGGTCAGTCAC+TGG | - | chr3.3:15031958-15031977 | MS.gene057922:CDS | 55.0% | |
| AAGTCTGTCGCAGGTGTGCA+CGG | + | chr3.3:15030813-15030832 | None:intergenic | 55.0% | |
| ATCGGGCCACAAGAAAAGCC+AGG | - | chr3.3:15031754-15031773 | MS.gene057922:intron | 55.0% | |
| GAAGGAGGAGCTGCAGTTGA+TGG | - | chr3.3:15031844-15031863 | MS.gene057922:CDS | 55.0% | |
| GCTGCTATGGTGAAGAAGGC+AGG | - | chr3.3:15031946-15031965 | MS.gene057922:CDS | 55.0% | |
| GGCTCGGATTGCTTGACTAC+AGG | + | chr3.3:15029653-15029672 | None:intergenic | 55.0% | |
| GTGCCAGGAGGATGAAGTGA+AGG | + | chr3.3:15027628-15027647 | None:intergenic | 55.0% | |
| GTGGCGCGACTGTCATAGTT+AGG | - | chr3.3:15028220-15028239 | MS.gene057922:intron | 55.0% | |
| GTTGCACCGTTGACCACCAT+GGG | - | chr3.3:15030466-15030485 | MS.gene057922:intron | 55.0% | |
| TGGAGTTTGGCCCGGAAGTA+TGG | + | chr3.3:15031036-15031055 | None:intergenic | 55.0% | |
| TTTGCAAGTGGGTCAGTGCC+AGG | + | chr3.3:15027643-15027662 | None:intergenic | 55.0% | |
| ! | AAACCATTGCCGGCCCCTTT+TGG | - | chr3.3:15030754-15030773 | MS.gene057922:intron | 55.0% |
| !! | GCATTTTGACGGAGCACCCA+TGG | + | chr3.3:15030485-15030504 | None:intergenic | 55.0% |
| !! | TAAAGTATTGGCGGTGGCGG+TGG | + | chr3.3:15031734-15031753 | None:intergenic | 55.0% |
| !! | TCGGTGCCTGGCTTTTCTTG+TGG | + | chr3.3:15031763-15031782 | None:intergenic | 55.0% |
| !! | TTTTGACGGAGCACCCATGG+TGG | + | chr3.3:15030482-15030501 | None:intergenic | 55.0% |
| !!! | GGTTTTGGTTGATCGGTGCC+TGG | + | chr3.3:15031775-15031794 | None:intergenic | 55.0% |
| GATGCTGCTCCAAAAGGGGC+CGG | + | chr3.3:15030766-15030785 | None:intergenic | 60.0% | |
| GGTTGCACCGTTGACCACCA+TGG | - | chr3.3:15030465-15030484 | MS.gene057922:intron | 60.0% | |
| ! | GGAGCACCCATGGTGGTCAA+CGG | + | chr3.3:15030475-15030494 | None:intergenic | 60.0% |
| ! | GGGGCAGCGCAGCATTTTGA+CGG | + | chr3.3:15030496-15030515 | None:intergenic | 60.0% |
| ! | TGGGAGAAAGCACGCTGCTC+AGG | - | chr3.3:15029757-15029776 | MS.gene057922:CDS | 60.0% |
| GCAAGTGGGTCAGTGCCAGG+AGG | + | chr3.3:15027640-15027659 | None:intergenic | 65.0% | |
| GCTCCAAAAGGGGCCGGCAA+TGG | + | chr3.3:15030760-15030779 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 15027541 | 15031984 | 15027541 | ID=MS.gene057922 |
| chr3.3 | mRNA | 15027541 | 15031984 | 15027541 | ID=MS.gene057922.t1;Parent=MS.gene057922 |
| chr3.3 | exon | 15031763 | 15031984 | 15031763 | ID=MS.gene057922.t1.exon1;Parent=MS.gene057922.t1 |
| chr3.3 | CDS | 15031763 | 15031984 | 15031763 | ID=cds.MS.gene057922.t1;Parent=MS.gene057922.t1 |
| chr3.3 | exon | 15029747 | 15030181 | 15029747 | ID=MS.gene057922.t1.exon2;Parent=MS.gene057922.t1 |
| chr3.3 | CDS | 15029747 | 15030181 | 15029747 | ID=cds.MS.gene057922.t1;Parent=MS.gene057922.t1 |
| chr3.3 | exon | 15027541 | 15028029 | 15027541 | ID=MS.gene057922.t1.exon3;Parent=MS.gene057922.t1 |
| chr3.3 | CDS | 15027541 | 15028029 | 15027541 | ID=cds.MS.gene057922.t1;Parent=MS.gene057922.t1 |
| Gene Sequence |
| Protein sequence |
