Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058001.t1 | XP_024642224.1 | 71.5 | 663 | 59 | 2 | 1 | 535 | 1 | 661 | 3.50E-271 | 944.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058001.t1 | Q9SZL8 | 27.1 | 594 | 286 | 12 | 15 | 467 | 47 | 634 | 2.4e-55 | 218.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058001.t1 | A0A2Z6M8U9 | 62.1 | 654 | 120 | 3 | 1 | 530 | 1 | 650 | 1.8e-224 | 788.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene058001.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058001.t1 | MTR_0856s0010 | 79.012 | 162 | 32 | 1 | 1 | 162 | 1 | 160 | 8.71e-89 | 274 |
| MS.gene058001.t1 | MTR_7g115320 | 56.164 | 73 | 29 | 1 | 123 | 195 | 6 | 75 | 3.46e-21 | 88.6 |
| MS.gene058001.t1 | MTR_4g035820 | 27.414 | 321 | 199 | 12 | 36 | 336 | 75 | 381 | 2.42e-20 | 96.3 |
| MS.gene058001.t1 | MTR_1g008290 | 35.075 | 134 | 84 | 1 | 96 | 229 | 14 | 144 | 3.86e-20 | 87.8 |
| MS.gene058001.t1 | MTR_7g446060 | 40.449 | 89 | 51 | 1 | 111 | 199 | 1 | 87 | 6.21e-17 | 78.2 |
| MS.gene058001.t1 | MTR_7g074790 | 25.434 | 173 | 106 | 3 | 29 | 198 | 5 | 157 | 7.64e-14 | 72.0 |
| MS.gene058001.t1 | MTR_6g051425 | 24.519 | 208 | 129 | 4 | 44 | 233 | 25 | 222 | 8.23e-14 | 73.6 |
| MS.gene058001.t1 | MTR_1g083640 | 23.790 | 248 | 152 | 7 | 19 | 231 | 24 | 269 | 8.80e-14 | 72.8 |
| MS.gene058001.t1 | MTR_5g039760 | 27.551 | 196 | 116 | 4 | 34 | 226 | 8 | 180 | 2.21e-13 | 69.7 |
| MS.gene058001.t1 | MTR_0558s0020 | 22.656 | 256 | 164 | 7 | 8 | 231 | 1 | 254 | 2.22e-13 | 71.6 |
| MS.gene058001.t1 | MTR_1g013060 | 22.170 | 212 | 155 | 4 | 31 | 233 | 19 | 229 | 1.99e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058001.t1 | AT4G38180 | 38.115 | 244 | 140 | 3 | 224 | 467 | 402 | 634 | 3.18e-46 | 176 |
| MS.gene058001.t1 | AT4G38180 | 28.571 | 231 | 152 | 6 | 15 | 233 | 47 | 276 | 2.26e-19 | 93.2 |
| MS.gene058001.t1 | AT3G22170 | 34.432 | 273 | 167 | 3 | 232 | 504 | 391 | 651 | 7.12e-44 | 169 |
| MS.gene058001.t1 | AT3G22170 | 25.703 | 249 | 147 | 4 | 5 | 237 | 39 | 265 | 1.74e-14 | 77.8 |
| MS.gene058001.t1 | AT3G22170 | 34.432 | 273 | 167 | 3 | 232 | 504 | 391 | 651 | 7.12e-44 | 169 |
| MS.gene058001.t1 | AT3G22170 | 25.703 | 249 | 147 | 4 | 5 | 237 | 39 | 265 | 1.74e-14 | 77.8 |
| MS.gene058001.t1 | AT4G15090 | 30.723 | 332 | 213 | 7 | 219 | 548 | 368 | 684 | 1.57e-43 | 168 |
| MS.gene058001.t1 | AT4G15090 | 31.356 | 236 | 154 | 6 | 5 | 233 | 18 | 252 | 6.52e-23 | 104 |
| MS.gene058001.t1 | AT4G15090 | 30.723 | 332 | 213 | 7 | 219 | 548 | 368 | 684 | 1.57e-43 | 168 |
| MS.gene058001.t1 | AT4G15090 | 31.356 | 236 | 154 | 6 | 5 | 233 | 18 | 252 | 6.52e-23 | 104 |
| MS.gene058001.t1 | AT4G15090 | 30.723 | 332 | 213 | 7 | 219 | 548 | 368 | 684 | 1.57e-43 | 168 |
| MS.gene058001.t1 | AT4G15090 | 31.356 | 236 | 154 | 6 | 5 | 233 | 18 | 252 | 6.52e-23 | 104 |
| MS.gene058001.t1 | AT4G15090 | 30.723 | 332 | 213 | 7 | 219 | 548 | 368 | 684 | 1.57e-43 | 168 |
| MS.gene058001.t1 | AT4G15090 | 31.356 | 236 | 154 | 6 | 5 | 233 | 18 | 252 | 6.52e-23 | 104 |
| MS.gene058001.t1 | AT4G15090 | 30.723 | 332 | 213 | 7 | 219 | 548 | 368 | 684 | 1.57e-43 | 168 |
| MS.gene058001.t1 | AT4G15090 | 31.356 | 236 | 154 | 6 | 5 | 233 | 18 | 252 | 6.52e-23 | 104 |
| MS.gene058001.t1 | AT1G52520 | 31.944 | 288 | 187 | 5 | 236 | 519 | 404 | 686 | 1.94e-40 | 158 |
| MS.gene058001.t1 | AT1G52520 | 25.728 | 206 | 137 | 6 | 36 | 237 | 85 | 278 | 1.12e-11 | 68.6 |
| MS.gene058001.t1 | AT4G38170 | 33.333 | 228 | 147 | 2 | 244 | 471 | 181 | 403 | 7.32e-40 | 154 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.32e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.32e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 281 | 546 | 2.44e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 281 | 546 | 2.48e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.55e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.60e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.60e-37 | 149 |
| MS.gene058001.t1 | AT2G32250 | 32.130 | 277 | 177 | 4 | 228 | 504 | 322 | 587 | 2.60e-37 | 149 |
| MS.gene058001.t1 | AT1G76320 | 32.271 | 251 | 159 | 3 | 244 | 494 | 329 | 568 | 9.70e-37 | 147 |
| MS.gene058001.t1 | AT1G76320 | 29.082 | 196 | 130 | 4 | 40 | 233 | 1 | 189 | 1.48e-18 | 90.5 |
| MS.gene058001.t1 | AT1G76320 | 32.271 | 251 | 159 | 3 | 244 | 494 | 329 | 568 | 9.88e-37 | 147 |
| MS.gene058001.t1 | AT1G76320 | 29.082 | 196 | 130 | 4 | 40 | 233 | 1 | 189 | 1.44e-18 | 90.5 |
| MS.gene058001.t1 | AT1G76320 | 32.271 | 251 | 159 | 3 | 244 | 494 | 329 | 568 | 9.88e-37 | 147 |
| MS.gene058001.t1 | AT1G76320 | 29.082 | 196 | 130 | 4 | 40 | 233 | 1 | 189 | 1.44e-18 | 90.5 |
| MS.gene058001.t1 | AT1G76320 | 32.271 | 251 | 159 | 3 | 244 | 494 | 329 | 568 | 1.13e-36 | 146 |
| MS.gene058001.t1 | AT1G76320 | 29.082 | 196 | 130 | 4 | 40 | 233 | 1 | 189 | 2.18e-18 | 90.1 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 279 | 526 | 4.36e-33 | 135 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 336 | 583 | 4.85e-33 | 136 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 336 | 583 | 4.85e-33 | 136 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 336 | 583 | 5.72e-33 | 135 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 336 | 583 | 5.72e-33 | 135 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 336 | 583 | 5.89e-33 | 135 |
| MS.gene058001.t1 | AT4G19990 | 31.102 | 254 | 169 | 2 | 240 | 493 | 350 | 597 | 6.81e-33 | 135 |
| MS.gene058001.t1 | AT2G27110 | 31.154 | 260 | 167 | 5 | 247 | 504 | 221 | 470 | 5.48e-32 | 132 |
| MS.gene058001.t1 | AT2G27110 | 31.154 | 260 | 167 | 5 | 247 | 504 | 366 | 615 | 5.54e-32 | 133 |
| MS.gene058001.t1 | AT2G27110 | 28.302 | 212 | 117 | 8 | 28 | 233 | 41 | 223 | 6.48e-11 | 66.2 |
| MS.gene058001.t1 | AT2G27110 | 31.154 | 260 | 167 | 5 | 247 | 504 | 366 | 615 | 5.54e-32 | 133 |
| MS.gene058001.t1 | AT2G27110 | 28.302 | 212 | 117 | 8 | 28 | 233 | 41 | 223 | 6.48e-11 | 66.2 |
| MS.gene058001.t1 | AT3G06250 | 31.304 | 230 | 150 | 3 | 236 | 465 | 481 | 702 | 1.85e-31 | 131 |
| MS.gene058001.t1 | AT3G06250 | 31.304 | 230 | 150 | 3 | 236 | 465 | 481 | 702 | 1.85e-31 | 131 |
| MS.gene058001.t1 | AT3G06250 | 31.304 | 230 | 150 | 3 | 236 | 465 | 481 | 702 | 1.85e-31 | 131 |
| MS.gene058001.t1 | AT5G18960 | 30.870 | 230 | 151 | 3 | 236 | 465 | 505 | 726 | 5.63e-30 | 126 |
| MS.gene058001.t1 | AT5G18960 | 30.870 | 230 | 151 | 3 | 236 | 465 | 505 | 726 | 5.63e-30 | 126 |
| MS.gene058001.t1 | AT1G80010 | 25.403 | 248 | 178 | 4 | 228 | 471 | 421 | 665 | 2.11e-22 | 102 |
| MS.gene058001.t1 | AT1G10240 | 28.507 | 221 | 148 | 3 | 244 | 464 | 394 | 604 | 2.71e-20 | 95.9 |
| MS.gene058001.t1 | AT1G10240 | 28.507 | 221 | 148 | 3 | 244 | 464 | 394 | 604 | 2.71e-20 | 95.9 |
| MS.gene058001.t1 | AT5G28530 | 26.291 | 213 | 146 | 3 | 252 | 464 | 354 | 555 | 2.79e-16 | 83.2 |
| MS.gene058001.t1 | AT5G28530 | 26.291 | 213 | 146 | 3 | 252 | 464 | 417 | 618 | 3.17e-16 | 83.2 |
| MS.gene058001.t1 | AT5G28530 | 26.512 | 215 | 139 | 5 | 252 | 464 | 354 | 551 | 2.10e-15 | 80.5 |
| MS.gene058001.t1 | AT5G28530 | 26.512 | 215 | 139 | 5 | 252 | 464 | 417 | 614 | 2.90e-15 | 80.1 |
| MS.gene058001.t1 | AT5G28530 | 26.512 | 215 | 139 | 5 | 252 | 464 | 417 | 614 | 2.90e-15 | 80.1 |
| MS.gene058001.t1 | AT3G07500 | 35.238 | 105 | 65 | 2 | 35 | 136 | 32 | 136 | 6.46e-11 | 63.2 |
Find 105 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACATCTCTTTCATTAAA+TGG | 0.136344 | 8.3:-21819146 | None:intergenic |
| GTACACTCATGCTAAATTTA+AGG | 0.183512 | 8.3:+21820069 | MS.gene058001:CDS |
| TCTATTTCATAGAAGAAATT+AGG | 0.188850 | 8.3:-21819260 | None:intergenic |
| TTGAACAACCTTGCCTTTCT+AGG | 0.211285 | 8.3:-21819002 | None:intergenic |
| TGCTCTTTGTTTGAATTTAG+AGG | 0.264478 | 8.3:+21820262 | MS.gene058001:CDS |
| AGTATACATGCTTTCTTTGA+TGG | 0.267857 | 8.3:+21819887 | MS.gene058001:CDS |
| CCCTCTATCATCACTCTGTT+TGG | 0.271721 | 8.3:-21820725 | None:intergenic |
| CTCTGTTTGGGTCGATTACT+TGG | 0.272658 | 8.3:-21820712 | None:intergenic |
| TGTATAACGAGCGTCATAAA+TGG | 0.273547 | 8.3:+21819804 | MS.gene058001:CDS |
| GCTACAATTGAAAATGTTAA+AGG | 0.280340 | 8.3:+21820565 | MS.gene058001:CDS |
| TTTCTTCTATGAAATAGATT+TGG | 0.300418 | 8.3:+21819265 | MS.gene058001:CDS |
| CGGCCAACTCGCACAGTGCC+TGG | 0.339099 | 8.3:+21821693 | MS.gene058001:CDS |
| TGAAGTGTGTGTTGGGTTGA+TGG | 0.346710 | 8.3:-21821613 | None:intergenic |
| GTTCAAGGCCAACAAGAAAA+TGG | 0.356488 | 8.3:+21819019 | MS.gene058001:CDS |
| CAGCAGAATCATTGGTTGAC+TGG | 0.379379 | 8.3:+21819779 | MS.gene058001:CDS |
| GGTTGATGGGTCTGCGGTTG+TGG | 0.382343 | 8.3:-21821599 | None:intergenic |
| TGTATCAAATTGAAAGAAGA+TGG | 0.385199 | 8.3:+21818930 | MS.gene058001:CDS |
| TTAGTTAAAACATACTTCTC+TGG | 0.397498 | 8.3:-21820340 | None:intergenic |
| TTGAGCTTCAGCAGAATCAT+TGG | 0.398767 | 8.3:+21819771 | MS.gene058001:CDS |
| TTGTCAAACCTGTCCATTTG+TGG | 0.398833 | 8.3:-21820430 | None:intergenic |
| CAAACTGATGTAGTATTTCA+TGG | 0.402839 | 8.3:-21820519 | None:intergenic |
| AACAAGGAACGACGTGCAAT+TGG | 0.416589 | 8.3:+21819179 | MS.gene058001:CDS |
| AATGTTAAAGGAAGTTTCAA+TGG | 0.417103 | 8.3:+21820577 | MS.gene058001:CDS |
| ATTTGTCACTCTTTCAGTAT+TGG | 0.425839 | 8.3:-21820837 | None:intergenic |
| CCTCTATCATCACTCTGTTT+GGG | 0.427390 | 8.3:-21820724 | None:intergenic |
| CCCAAACAGAGTGATGATAG+AGG | 0.429573 | 8.3:+21820724 | MS.gene058001:CDS |
| CAATCTCTGGTTAAAGATGC+AGG | 0.432888 | 8.3:+21819107 | MS.gene058001:CDS |
| TGAACAACCTTGCCTTTCTA+GGG | 0.439320 | 8.3:-21819001 | None:intergenic |
| AGAAAATGGACTTGCATGTA+AGG | 0.444990 | 8.3:+21819033 | MS.gene058001:CDS |
| CAACCTTGCCTTTCTAGGGC+TGG | 0.475224 | 8.3:-21818997 | None:intergenic |
| TTGAAGACACGTCCGACAAT+GGG | 0.482433 | 8.3:+21818885 | MS.gene058001:CDS |
| AATTTGATACAAATCTTAGC+AGG | 0.483019 | 8.3:-21818918 | None:intergenic |
| TTTGCTGTGAAGTGTGTGTT+GGG | 0.484322 | 8.3:-21821620 | None:intergenic |
| GCCGCAATGCTGAGCTGTCG+TGG | 0.484798 | 8.3:-21821671 | None:intergenic |
| AGCAGAATCATTGGTTGACT+GGG | 0.485769 | 8.3:+21819780 | MS.gene058001:CDS |
| TAGAAAGGCAAGGTTGTTCA+AGG | 0.489258 | 8.3:+21819004 | MS.gene058001:CDS |
| TTGCCAGGCACTGTGCGAGT+TGG | 0.491739 | 8.3:-21821696 | None:intergenic |
| CCTTTACGTTTAACCCGCAA+TGG | 0.496386 | 8.3:-21820637 | None:intergenic |
| TCATCATACCAGCCCTAGAA+AGG | 0.496553 | 8.3:+21818989 | MS.gene058001:CDS |
| ATTCTTGCATGCACAAGAGA+AGG | 0.499742 | 8.3:+21818834 | MS.gene058001:CDS |
| AAGATTAGAACATCGAGAAA+AGG | 0.502639 | 8.3:+21818786 | MS.gene058001:CDS |
| TCAAATGTTGTTGTGGATTG+TGG | 0.509257 | 8.3:+21818606 | MS.gene058001:CDS |
| AGCATTCACAACTTACATCA+TGG | 0.513075 | 8.3:-21820243 | None:intergenic |
| CTGGTATGATGAGAATGATC+AGG | 0.514347 | 8.3:-21818978 | None:intergenic |
| TCCTCATTGAACACTGTGGA+GGG | 0.515771 | 8.3:+21820130 | MS.gene058001:CDS |
| GTATAACGAGCGTCATAAAT+GGG | 0.517095 | 8.3:+21819805 | MS.gene058001:CDS |
| GAAGTGTGTGTTGGGTTGAT+GGG | 0.519358 | 8.3:-21821612 | None:intergenic |
| CATCGAGAAAAGGACGAGAT+GGG | 0.520186 | 8.3:+21818796 | MS.gene058001:CDS |
| GACACAACTGAAGCCACAAA+TGG | 0.523825 | 8.3:+21820417 | MS.gene058001:CDS |
| CGACGTGCAATTGGAAAAGA+AGG | 0.525049 | 8.3:+21819188 | MS.gene058001:CDS |
| TAGCATGAGTGTACTGACCT+TGG | 0.527902 | 8.3:-21820060 | None:intergenic |
| AAGAAGATGATGATGCATGC+TGG | 0.530084 | 8.3:+21818676 | MS.gene058001:CDS |
| GATGGTGAAGGTATAGAAGT+TGG | 0.532672 | 8.3:+21818636 | MS.gene058001:CDS |
| CTTTGCCACATATCATGTGT+TGG | 0.534557 | 8.3:+21820156 | MS.gene058001:CDS |
| ACATCGAGAAAAGGACGAGA+TGG | 0.535829 | 8.3:+21818795 | MS.gene058001:CDS |
| AACTGAAGCCACAAATGGAC+AGG | 0.546115 | 8.3:+21820422 | MS.gene058001:CDS |
| TTCCTCATTGAACACTGTGG+AGG | 0.548855 | 8.3:+21820129 | MS.gene058001:CDS |
| GGATAGTTCAAATGTTGTTG+TGG | 0.550233 | 8.3:+21818599 | MS.gene058001:CDS |
| GCTACAAACAGCAAAACCGC+TGG | 0.556288 | 8.3:+21821531 | MS.gene058001:intron |
| GTGTTGGAGGACGTGTTAGT+TGG | 0.556506 | 8.3:+21820172 | MS.gene058001:CDS |
| GTGGATTGTGGTAGTACTGA+TGG | 0.559597 | 8.3:+21818618 | MS.gene058001:CDS |
| ATTGAAATCAATGATGATGC+AGG | 0.561814 | 8.3:+21819062 | MS.gene058001:CDS |
| CCATTGCGGGTTAAACGTAA+AGG | 0.570210 | 8.3:+21820637 | MS.gene058001:CDS |
| TCAATTGAAAAGCAATTCCA+AGG | 0.574876 | 8.3:+21820043 | MS.gene058001:CDS |
| GTTTGAACCGCAAGAAATTG+TGG | 0.575458 | 8.3:-21820017 | None:intergenic |
| TTCTTGCATGCACAAGAGAA+GGG | 0.575717 | 8.3:+21818835 | MS.gene058001:CDS |
| ACACACACACATAGGAACTC+AGG | 0.576129 | 8.3:+21821564 | MS.gene058001:CDS |
| ATTGAAGACACGTCCGACAA+TGG | 0.579883 | 8.3:+21818884 | MS.gene058001:CDS |
| AGAAGATGATGATGCATGCT+GGG | 0.582547 | 8.3:+21818677 | MS.gene058001:CDS |
| GCCACGACAGCTCAGCATTG+CGG | 0.583377 | 8.3:+21821670 | MS.gene058001:CDS |
| ACGACAGCTCAGCATTGCGG+CGG | 0.585898 | 8.3:+21821673 | MS.gene058001:CDS |
| ATCGAGAAAAGGACGAGATG+GGG | 0.592032 | 8.3:+21818797 | MS.gene058001:CDS |
| CTACAAACAGCAAAACCGCT+GGG | 0.592437 | 8.3:+21821532 | MS.gene058001:CDS |
| GTCCTCCAACACATGATATG+TGG | 0.596832 | 8.3:-21820161 | None:intergenic |
| TGGAAAAGAAGGTGATGGCA+AGG | 0.598389 | 8.3:+21819199 | MS.gene058001:CDS |
| TTCAATTGTAGCATTCCTGG+TGG | 0.605671 | 8.3:-21820554 | None:intergenic |
| TGCCACATATCATGTGTTGG+AGG | 0.606475 | 8.3:+21820159 | MS.gene058001:CDS |
| GCAATTGGAAAAGAAGGTGA+TGG | 0.609009 | 8.3:+21819194 | MS.gene058001:CDS |
| ATGAATACCACAATTTCTTG+CGG | 0.610767 | 8.3:+21820010 | MS.gene058001:CDS |
| AATTGAAAGAAGATGGATTG+TGG | 0.618386 | 8.3:+21818937 | MS.gene058001:CDS |
| CCAAACAGAGTGATGATAGA+GGG | 0.619580 | 8.3:+21820725 | MS.gene058001:CDS |
| TTGCTTCTGATTTACCCACC+AGG | 0.625219 | 8.3:+21820539 | MS.gene058001:CDS |
| GAGAAAAGGACGAGATGGGG+AGG | 0.628028 | 8.3:+21818800 | MS.gene058001:CDS |
| CTACGAGGTTGCTGAAATAG+CGG | 0.631277 | 8.3:+21820468 | MS.gene058001:CDS |
| CAATGATGATGCAGGTGTGA+GGG | 0.635539 | 8.3:+21819070 | MS.gene058001:CDS |
| AAATGGACTTGCATGTAAGG+AGG | 0.643265 | 8.3:+21819036 | MS.gene058001:CDS |
| CTCTGGTTAAAGATGCAGGA+GGG | 0.643359 | 8.3:+21819111 | MS.gene058001:CDS |
| TCAATTGTAGCATTCCTGGT+GGG | 0.645571 | 8.3:-21820553 | None:intergenic |
| TGTGGTAGTACTGATGGTGA+AGG | 0.646539 | 8.3:+21818624 | MS.gene058001:CDS |
| TGTGAGGAACTATGTTAACA+AGG | 0.653364 | 8.3:+21819163 | MS.gene058001:CDS |
| GGTGACTCAAATCCAAACAA+TGG | 0.655899 | 8.3:+21820598 | MS.gene058001:CDS |
| TATGTGTATGTGCTCAAGAG+AGG | 0.656196 | 8.3:+21820305 | MS.gene058001:CDS |
| GATTAAGTACATCAATGCAG+AGG | 0.661617 | 8.3:-21820874 | None:intergenic |
| TCAATGATGATGCAGGTGTG+AGG | 0.662085 | 8.3:+21819069 | MS.gene058001:CDS |
| ATACCAGCCCTAGAAAGGCA+AGG | 0.674438 | 8.3:+21818994 | MS.gene058001:CDS |
| ATGTGTATGTGCTCAAGAGA+GGG | 0.683590 | 8.3:+21820306 | MS.gene058001:CDS |
| GCCCTCCACAGTGTTCAATG+AGG | 0.686685 | 8.3:-21820131 | None:intergenic |
| GTGTTGGGTTGATGGGTCTG+CGG | 0.687011 | 8.3:-21821605 | None:intergenic |
| TGCTTCCTCATTGAACACTG+TGG | 0.696702 | 8.3:+21820126 | MS.gene058001:CDS |
| CATTTAATGAAAGAGATGTG+AGG | 0.706266 | 8.3:+21819147 | MS.gene058001:CDS |
| TGAGTTTGAAGACACATCTG+TGG | 0.706619 | 8.3:+21820492 | MS.gene058001:CDS |
| GTTATGCAAGCACTTCTACG+AGG | 0.714152 | 8.3:+21820453 | MS.gene058001:CDS |
| TCTCTGGTTAAAGATGCAGG+AGG | 0.725630 | 8.3:+21819110 | MS.gene058001:CDS |
| GTGTGTGCTTGCTGTCCCAG+CGG | 0.727153 | 8.3:-21821547 | None:intergenic |
| ACTGATGTAGTATTTCATGG+AGG | 0.770188 | 8.3:-21820516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAACTTTTTTTTTTTGAAA+TGG | + | chr8.3:21821267-21821286 | MS.gene058001:intron | 10.0% |
| !!! | TTATTTGTTACATTTTTTTT+TGG | - | chr8.3:21821135-21821154 | None:intergenic | 10.0% |
| !! | AATGGAACAAAAATATTAAA+AGG | + | chr8.3:21820362-21820381 | MS.gene058001:CDS | 15.0% |
| !!! | ATAGATATTTTTCTTTTTGA+TGG | - | chr8.3:21820670-21820689 | None:intergenic | 15.0% |
| !!! | CTTCTTAAGAAAATATTTTT+GGG | + | chr8.3:21819835-21819854 | MS.gene058001:CDS | 15.0% |
| !! | CAAATTTAGTGAACAATATA+AGG | + | chr8.3:21820926-21820945 | MS.gene058001:intron | 20.0% |
| !! | TCTATTTCATAGAAGAAATT+AGG | - | chr8.3:21819263-21819282 | None:intergenic | 20.0% |
| !! | TTTCTTCTATGAAATAGATT+TGG | + | chr8.3:21819265-21819284 | MS.gene058001:CDS | 20.0% |
| !!! | AAATATTTTCTTAAGAAGGT+TGG | - | chr8.3:21819833-21819852 | None:intergenic | 20.0% |
| !!! | AAGTTTAATGAATTTTTGAC+AGG | - | chr8.3:21820974-21820993 | None:intergenic | 20.0% |
| !!! | AGAAGTATGTTTTAACTAAA+TGG | + | chr8.3:21820344-21820363 | MS.gene058001:CDS | 20.0% |
| !!! | ATATTTTTCTTTTTGATGGA+GGG | - | chr8.3:21820666-21820685 | None:intergenic | 20.0% |
| !!! | ATCATTATTTTTTGTTGTCA+TGG | - | chr8.3:21821222-21821241 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTAAGA+AGG | - | chr8.3:21819837-21819856 | None:intergenic | 20.0% |
| !!! | CCTTCTTAAGAAAATATTTT+TGG | + | chr8.3:21819834-21819853 | MS.gene058001:CDS | 20.0% |
| !!! | GAAAAACACATATCTATTTT+AGG | - | chr8.3:21818705-21818724 | None:intergenic | 20.0% |
| !!! | TATCTTGATGATAAATTTTG+TGG | - | chr8.3:21820999-21821018 | None:intergenic | 20.0% |
| !!! | TGTTACATTTTTTTTTGGAA+GGG | - | chr8.3:21821130-21821149 | None:intergenic | 20.0% |
| !!! | TTGTTACATTTTTTTTTGGA+AGG | - | chr8.3:21821131-21821150 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTTCAAATTTGT+AGG | + | chr8.3:21820811-21820830 | MS.gene058001:intron | 20.0% |
| ! | AAAATTGCTGAAAAACTTAG+CGG | + | chr8.3:21819644-21819663 | MS.gene058001:intron | 25.0% |
| ! | AATGTTAAAGGAAGTTTCAA+TGG | + | chr8.3:21820577-21820596 | MS.gene058001:CDS | 25.0% |
| ! | AATTTGATACAAATCTTAGC+AGG | - | chr8.3:21818921-21818940 | None:intergenic | 25.0% |
| ! | CTAATGAGAAGAAAAGAATT+GGG | - | chr8.3:21821247-21821266 | None:intergenic | 25.0% |
| ! | GCTACAATTGAAAATGTTAA+AGG | + | chr8.3:21820565-21820584 | MS.gene058001:CDS | 25.0% |
| ! | TACTTAATCAACCATGTAAA+TGG | + | chr8.3:21820888-21820907 | MS.gene058001:intron | 25.0% |
| ! | TCTAATGAGAAGAAAAGAAT+TGG | - | chr8.3:21821248-21821267 | None:intergenic | 25.0% |
| ! | TGTATCAAATTGAAAGAAGA+TGG | + | chr8.3:21818930-21818949 | MS.gene058001:CDS | 25.0% |
| ! | TTAGTTAAAACATACTTCTC+TGG | - | chr8.3:21820343-21820362 | None:intergenic | 25.0% |
| ! | TTGACAAAAATAGCTTATCA+AGG | - | chr8.3:21819225-21819244 | None:intergenic | 25.0% |
| ! | TTGTAATCACCATGTATATA+TGG | + | chr8.3:21820774-21820793 | MS.gene058001:intron | 25.0% |
| ! | TTTATGTTACTCATGTACTT+CGG | - | chr8.3:21821196-21821215 | None:intergenic | 25.0% |
| !! | GATATTTTTCTTTTTGATGG+AGG | - | chr8.3:21820667-21820686 | None:intergenic | 25.0% |
| !! | TCATGTAAGAAATGTGTTTT+GGG | + | chr8.3:21819298-21819317 | MS.gene058001:intron | 25.0% |
| !! | TGAATTTTTGTACCATTGTT+TGG | - | chr8.3:21820613-21820632 | None:intergenic | 25.0% |
| !! | TTCATGTAAGAAATGTGTTT+TGG | + | chr8.3:21819297-21819316 | MS.gene058001:intron | 25.0% |
| !!! | AAAGAGTATGCTTTTAGAAA+GGG | + | chr8.3:21818753-21818772 | MS.gene058001:CDS | 25.0% |
| !!! | AAGCTATTTTTGTCAAATGA+GGG | + | chr8.3:21819229-21819248 | MS.gene058001:CDS | 25.0% |
| !!! | AATTTAGAGGTATTTTGTGT+CGG | + | chr8.3:21820275-21820294 | MS.gene058001:CDS | 25.0% |
| !!! | AGTTTGCTATATGTATATTC+TGG | - | chr8.3:21821424-21821443 | None:intergenic | 25.0% |
| !!! | CATATGATTTTGAAGAGAAA+TGG | + | chr8.3:21819729-21819748 | MS.gene058001:CDS | 25.0% |
| !!! | GTTTAGTTTTTGTTGTTTGT+GGG | - | chr8.3:21821470-21821489 | None:intergenic | 25.0% |
| !!! | TAAAGAGTATGCTTTTAGAA+AGG | + | chr8.3:21818752-21818771 | MS.gene058001:CDS | 25.0% |
| !!! | TAAGCTATTTTTGTCAAATG+AGG | + | chr8.3:21819228-21819247 | MS.gene058001:CDS | 25.0% |
| !!! | TGTTTAGTTTTTGTTGTTTG+TGG | - | chr8.3:21821471-21821490 | None:intergenic | 25.0% |
| !!! | TTAAGAAAATATTTTTGGGC+TGG | + | chr8.3:21819839-21819858 | MS.gene058001:CDS | 25.0% |
| AAGATTAGAACATCGAGAAA+AGG | + | chr8.3:21818786-21818805 | MS.gene058001:CDS | 30.0% | |
| AATCAACATTACTTGGATGT+GGG | + | chr8.3:21819444-21819463 | MS.gene058001:intron | 30.0% | |
| AATCAACCATGTAAATGGTA+TGG | + | chr8.3:21820893-21820912 | MS.gene058001:intron | 30.0% | |
| AGATGCAATCCATATATACA+TGG | - | chr8.3:21820786-21820805 | None:intergenic | 30.0% | |
| AGTATACATGCTTTCTTTGA+TGG | + | chr8.3:21819887-21819906 | MS.gene058001:CDS | 30.0% | |
| ATGAATACCACAATTTCTTG+CGG | + | chr8.3:21820010-21820029 | MS.gene058001:CDS | 30.0% | |
| ATTTGTCACTCTTTCAGTAT+TGG | - | chr8.3:21820840-21820859 | None:intergenic | 30.0% | |
| CAAACTGATGTAGTATTTCA+TGG | - | chr8.3:21820522-21820541 | None:intergenic | 30.0% | |
| CATTTAATGAAAGAGATGTG+AGG | + | chr8.3:21819147-21819166 | MS.gene058001:CDS | 30.0% | |
| CTCACATCTCTTTCATTAAA+TGG | - | chr8.3:21819149-21819168 | None:intergenic | 30.0% | |
| GTACACTCATGCTAAATTTA+AGG | + | chr8.3:21820069-21820088 | MS.gene058001:CDS | 30.0% | |
| TACATGAAAAAGTTGCTAAG+AGG | + | chr8.3:21820689-21820708 | MS.gene058001:CDS | 30.0% | |
| TCAATTGAAAAGCAATTCCA+AGG | + | chr8.3:21820043-21820062 | MS.gene058001:CDS | 30.0% | |
| TGTAAATGGTATGGTTGTAA+TGG | + | chr8.3:21820902-21820921 | MS.gene058001:intron | 30.0% | |
| TTACAACCATACCATTTACA+TGG | - | chr8.3:21820902-21820921 | None:intergenic | 30.0% | |
| ! | ATTGAAATCAATGATGATGC+AGG | + | chr8.3:21819062-21819081 | MS.gene058001:CDS | 30.0% |
| ! | ATTTTCAATTGTAGCATTCC+TGG | - | chr8.3:21820560-21820579 | None:intergenic | 30.0% |
| ! | GTTCTAAACAACCACAAAAT+AGG | + | chr8.3:21821083-21821102 | MS.gene058001:intron | 30.0% |
| ! | TGCTCTTTGTTTGAATTTAG+AGG | + | chr8.3:21820262-21820281 | MS.gene058001:CDS | 30.0% |
| !! | AAGCTCAAATTTTTCGATGA+AGG | - | chr8.3:21819759-21819778 | None:intergenic | 30.0% |
| !! | AATTGAAAGAAGATGGATTG+TGG | + | chr8.3:21818937-21818956 | MS.gene058001:CDS | 30.0% |
| !! | ACTTTGGTGTGGTTTTTAAT+TGG | - | chr8.3:21821381-21821400 | None:intergenic | 30.0% |
| !! | CTTTGGTGTGGTTTTTAATT+GGG | - | chr8.3:21821380-21821399 | None:intergenic | 30.0% |
| !! | TTGTGTGGCTTTTTAATTCA+TGG | + | chr8.3:21819495-21819514 | MS.gene058001:intron | 30.0% |
| !! | TTTGGTGTGGTTTTTAATTG+GGG | - | chr8.3:21821379-21821398 | None:intergenic | 30.0% |
| !!! | CTTTTAGAAAGGGTTTTGAA+TGG | + | chr8.3:21818763-21818782 | MS.gene058001:CDS | 30.0% |
| AAAAATTCACAGTCCATTGC+GGG | + | chr8.3:21820624-21820643 | MS.gene058001:CDS | 35.0% | |
| AAGACACAGAATCATTTGTG+TGG | + | chr8.3:21819480-21819499 | MS.gene058001:intron | 35.0% | |
| ACACCAACAAAAACAGCAAA+AGG | - | chr8.3:21819410-21819429 | None:intergenic | 35.0% | |
| ACTGATGTAGTATTTCATGG+AGG | - | chr8.3:21820519-21820538 | None:intergenic | 35.0% | |
| AGCATTCACAACTTACATCA+TGG | - | chr8.3:21820246-21820265 | None:intergenic | 35.0% | |
| CAAAAATTCACAGTCCATTG+CGG | + | chr8.3:21820623-21820642 | MS.gene058001:CDS | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | + | chr8.3:21819443-21819462 | MS.gene058001:intron | 35.0% | |
| CATGGTCAATCAACATTACT+TGG | + | chr8.3:21819437-21819456 | MS.gene058001:intron | 35.0% | |
| GATTAAGTACATCAATGCAG+AGG | - | chr8.3:21820877-21820896 | None:intergenic | 35.0% | |
| GGATAGTTCAAATGTTGTTG+TGG | + | chr8.3:21818599-21818618 | MS.gene058001:CDS | 35.0% | |
| GTATAACGAGCGTCATAAAT+GGG | + | chr8.3:21819805-21819824 | MS.gene058001:CDS | 35.0% | |
| TATTGTGACTGACCAATGTA+AGG | + | chr8.3:21819550-21819569 | MS.gene058001:intron | 35.0% | |
| TGTATAACGAGCGTCATAAA+TGG | + | chr8.3:21819804-21819823 | MS.gene058001:CDS | 35.0% | |
| TGTGAGGAACTATGTTAACA+AGG | + | chr8.3:21819163-21819182 | MS.gene058001:CDS | 35.0% | |
| ! | ACTCATGTACTTCGGTTTTA+GGG | - | chr8.3:21821188-21821207 | None:intergenic | 35.0% |
| ! | AGAAAATGGACTTGCATGTA+AGG | + | chr8.3:21819033-21819052 | MS.gene058001:CDS | 35.0% |
| ! | ATGCAAGTCCATTTTCTTGT+TGG | - | chr8.3:21819030-21819049 | None:intergenic | 35.0% |
| ! | ATTCTTTTTCTGCTCGACTT+CGG | - | chr8.3:21819970-21819989 | None:intergenic | 35.0% |
| ! | CAACAAGACTTTTCAATCTC+TGG | + | chr8.3:21819094-21819113 | MS.gene058001:CDS | 35.0% |
| ! | CAAGTAATGTTGATTGACCA+TGG | - | chr8.3:21819439-21819458 | None:intergenic | 35.0% |
| ! | CATTTTGCATTGCCTTACAT+TGG | - | chr8.3:21819565-21819584 | None:intergenic | 35.0% |
| ! | TACTCATGTACTTCGGTTTT+AGG | - | chr8.3:21821189-21821208 | None:intergenic | 35.0% |
| ! | TCAAATGTTGTTGTGGATTG+TGG | + | chr8.3:21818606-21818625 | MS.gene058001:CDS | 35.0% |
| !! | ACACTTGTTGACCTATTTTG+TGG | - | chr8.3:21821097-21821116 | None:intergenic | 35.0% |
| !!! | ACAACAGTTCGTTTTTTGGT+AGG | - | chr8.3:21821501-21821520 | None:intergenic | 35.0% |
| !!! | AGCAACAACAGTTCGTTTTT+TGG | - | chr8.3:21821505-21821524 | None:intergenic | 35.0% |
| !!! | ATGCCTTTTGCTGTTTTTGT+TGG | + | chr8.3:21819404-21819423 | MS.gene058001:intron | 35.0% |
| !!! | CAACAGTTCGTTTTTTGGTA+GGG | - | chr8.3:21821500-21821519 | None:intergenic | 35.0% |
| !!! | GGACAATTTTTTCCCATTGT+CGG | - | chr8.3:21818900-21818919 | None:intergenic | 35.0% |
| !!! | TTTTGTTGTTTGTGGGAGTA+AGG | - | chr8.3:21821463-21821482 | None:intergenic | 35.0% |
| ATGTGTATGTGCTCAAGAGA+GGG | + | chr8.3:21820306-21820325 | MS.gene058001:CDS | 40.0% | |
| ATTCTTGCATGCACAAGAGA+AGG | + | chr8.3:21818834-21818853 | MS.gene058001:CDS | 40.0% | |
| CAATCTCTGGTTAAAGATGC+AGG | + | chr8.3:21819107-21819126 | MS.gene058001:CDS | 40.0% | |
| CCAAACAGAGTGATGATAGA+GGG | + | chr8.3:21820725-21820744 | MS.gene058001:CDS | 40.0% | |
| CCTCTATCATCACTCTGTTT+GGG | - | chr8.3:21820727-21820746 | None:intergenic | 40.0% | |
| CTGGTATGATGAGAATGATC+AGG | - | chr8.3:21818981-21819000 | None:intergenic | 40.0% | |
| CTTTGCCACATATCATGTGT+TGG | + | chr8.3:21820156-21820175 | MS.gene058001:CDS | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr8.3:21819194-21819213 | MS.gene058001:CDS | 40.0% | |
| GGCAATGCAAAATGCAATTG+AGG | + | chr8.3:21819571-21819590 | MS.gene058001:intron | 40.0% | |
| GGTGACTCAAATCCAAACAA+TGG | + | chr8.3:21820598-21820617 | MS.gene058001:CDS | 40.0% | |
| GTTCAAGGCCAACAAGAAAA+TGG | + | chr8.3:21819019-21819038 | MS.gene058001:CDS | 40.0% | |
| GTTTGAACCGCAAGAAATTG+TGG | - | chr8.3:21820020-21820039 | None:intergenic | 40.0% | |
| TAGAAAGGCAAGGTTGTTCA+AGG | + | chr8.3:21819004-21819023 | MS.gene058001:CDS | 40.0% | |
| TATGTGTATGTGCTCAAGAG+AGG | + | chr8.3:21820305-21820324 | MS.gene058001:CDS | 40.0% | |
| TCAATTGTAGCATTCCTGGT+GGG | - | chr8.3:21820556-21820575 | None:intergenic | 40.0% | |
| TCAGTCACAATACCAATAGG+AGG | - | chr8.3:21819542-21819561 | None:intergenic | 40.0% | |
| TGAACAACCTTGCCTTTCTA+GGG | - | chr8.3:21819004-21819023 | None:intergenic | 40.0% | |
| TGAGTTTGAAGACACATCTG+TGG | + | chr8.3:21820492-21820511 | MS.gene058001:CDS | 40.0% | |
| TGGTCAGTCACAATACCAAT+AGG | - | chr8.3:21819545-21819564 | None:intergenic | 40.0% | |
| TTCAATTGTAGCATTCCTGG+TGG | - | chr8.3:21820557-21820576 | None:intergenic | 40.0% | |
| TTCTTGCATGCACAAGAGAA+GGG | + | chr8.3:21818835-21818854 | MS.gene058001:CDS | 40.0% | |
| TTGAACAACCTTGCCTTTCT+AGG | - | chr8.3:21819005-21819024 | None:intergenic | 40.0% | |
| TTGAGCTTCAGCAGAATCAT+TGG | + | chr8.3:21819771-21819790 | MS.gene058001:CDS | 40.0% | |
| TTGTCAAACCTGTCCATTTG+TGG | - | chr8.3:21820433-21820452 | None:intergenic | 40.0% | |
| TTTGTTGGTGTGAATCACCA+TGG | + | chr8.3:21819419-21819438 | MS.gene058001:intron | 40.0% | |
| ! | AAATGGACTTGCATGTAAGG+AGG | + | chr8.3:21819036-21819055 | MS.gene058001:CDS | 40.0% |
| ! | AAGAAGATGATGATGCATGC+TGG | + | chr8.3:21818676-21818695 | MS.gene058001:CDS | 40.0% |
| ! | AATTGGGGTGTTACGCATAT+TGG | - | chr8.3:21821364-21821383 | None:intergenic | 40.0% |
| ! | AGAAGATGATGATGCATGCT+GGG | + | chr8.3:21818677-21818696 | MS.gene058001:CDS | 40.0% |
| ! | AGCAGAATCATTGGTTGACT+GGG | + | chr8.3:21819780-21819799 | MS.gene058001:CDS | 40.0% |
| ! | AGGGCTGCTTATGAGTATTT+TGG | + | chr8.3:21819335-21819354 | MS.gene058001:intron | 40.0% |
| ! | ATTGCTTGTTGCAGAGACTT+TGG | - | chr8.3:21821397-21821416 | None:intergenic | 40.0% |
| ! | GATGGTGAAGGTATAGAAGT+TGG | + | chr8.3:21818636-21818655 | MS.gene058001:CDS | 40.0% |
| ! | GCTGAAAAACTTAGCGGATA+TGG | + | chr8.3:21819650-21819669 | MS.gene058001:intron | 40.0% |
| ! | TTTGCTGTGAAGTGTGTGTT+GGG | - | chr8.3:21821623-21821642 | None:intergenic | 40.0% |
| !! | CTCATGTACTTCGGTTTTAG+GGG | - | chr8.3:21821187-21821206 | None:intergenic | 40.0% |
| !! | TTTTGCTGTGAAGTGTGTGT+TGG | - | chr8.3:21821624-21821643 | None:intergenic | 40.0% |
| AACAAGGAACGACGTGCAAT+TGG | + | chr8.3:21819179-21819198 | MS.gene058001:CDS | 45.0% | |
| AACTGAAGCCACAAATGGAC+AGG | + | chr8.3:21820422-21820441 | MS.gene058001:CDS | 45.0% | |
| ACACACACACATAGGAACTC+AGG | + | chr8.3:21821564-21821583 | MS.gene058001:CDS | 45.0% | |
| ACATCGAGAAAAGGACGAGA+TGG | + | chr8.3:21818795-21818814 | MS.gene058001:CDS | 45.0% | |
| AGTCTCTGCAACAAGCAATG+AGG | + | chr8.3:21821398-21821417 | MS.gene058001:intron | 45.0% | |
| ATCGAGAAAAGGACGAGATG+GGG | + | chr8.3:21818797-21818816 | MS.gene058001:CDS | 45.0% | |
| ATGCTAGGAAAGCCTCCTAT+TGG | + | chr8.3:21819527-21819546 | MS.gene058001:intron | 45.0% | |
| ATTGAAGACACGTCCGACAA+TGG | + | chr8.3:21818884-21818903 | MS.gene058001:CDS | 45.0% | |
| CATCGAGAAAAGGACGAGAT+GGG | + | chr8.3:21818796-21818815 | MS.gene058001:CDS | 45.0% | |
| CCCAAACAGAGTGATGATAG+AGG | + | chr8.3:21820724-21820743 | MS.gene058001:CDS | 45.0% | |
| CCCTCTATCATCACTCTGTT+TGG | - | chr8.3:21820728-21820747 | None:intergenic | 45.0% | |
| CCTTTACGTTTAACCCGCAA+TGG | - | chr8.3:21820640-21820659 | None:intergenic | 45.0% | |
| CGACGTGCAATTGGAAAAGA+AGG | + | chr8.3:21819188-21819207 | MS.gene058001:CDS | 45.0% | |
| CTACAAACAGCAAAACCGCT+GGG | + | chr8.3:21821532-21821551 | MS.gene058001:CDS | 45.0% | |
| CTACGAGGTTGCTGAAATAG+CGG | + | chr8.3:21820468-21820487 | MS.gene058001:CDS | 45.0% | |
| CTCTGGTTAAAGATGCAGGA+GGG | + | chr8.3:21819111-21819130 | MS.gene058001:CDS | 45.0% | |
| CTCTGTTTGGGTCGATTACT+TGG | - | chr8.3:21820715-21820734 | None:intergenic | 45.0% | |
| GACACAACTGAAGCCACAAA+TGG | + | chr8.3:21820417-21820436 | MS.gene058001:CDS | 45.0% | |
| GTCCTCCAACACATGATATG+TGG | - | chr8.3:21820164-21820183 | None:intergenic | 45.0% | |
| GTTATGCAAGCACTTCTACG+AGG | + | chr8.3:21820453-21820472 | MS.gene058001:CDS | 45.0% | |
| TCATCATACCAGCCCTAGAA+AGG | + | chr8.3:21818989-21819008 | MS.gene058001:CDS | 45.0% | |
| TCATGGCTTCGTTGTATGCT+AGG | + | chr8.3:21819512-21819531 | MS.gene058001:intron | 45.0% | |
| TCCTCATTGAACACTGTGGA+GGG | + | chr8.3:21820130-21820149 | MS.gene058001:CDS | 45.0% | |
| TCTCTGGTTAAAGATGCAGG+AGG | + | chr8.3:21819110-21819129 | MS.gene058001:CDS | 45.0% | |
| TGCCACATATCATGTGTTGG+AGG | + | chr8.3:21820159-21820178 | MS.gene058001:CDS | 45.0% | |
| TGCTTCCTCATTGAACACTG+TGG | + | chr8.3:21820126-21820145 | MS.gene058001:CDS | 45.0% | |
| TTCCTCATTGAACACTGTGG+AGG | + | chr8.3:21820129-21820148 | MS.gene058001:CDS | 45.0% | |
| TTGAAGACACGTCCGACAAT+GGG | + | chr8.3:21818885-21818904 | MS.gene058001:CDS | 45.0% | |
| TTGCTTCTGATTTACCCACC+AGG | + | chr8.3:21820539-21820558 | MS.gene058001:CDS | 45.0% | |
| TTGGGCTGATGCAAGAAGTA+GGG | + | chr8.3:21819316-21819335 | MS.gene058001:intron | 45.0% | |
| TTGTTGCAGAGACTTTGGTG+TGG | - | chr8.3:21821392-21821411 | None:intergenic | 45.0% | |
| TTGTTTGTGGGAGTAAGGCA+TGG | - | chr8.3:21821458-21821477 | None:intergenic | 45.0% | |
| TTTGGGCTGATGCAAGAAGT+AGG | + | chr8.3:21819315-21819334 | MS.gene058001:intron | 45.0% | |
| ! | CAATGATGATGCAGGTGTGA+GGG | + | chr8.3:21819070-21819089 | MS.gene058001:CDS | 45.0% |
| ! | CAGCAGAATCATTGGTTGAC+TGG | + | chr8.3:21819779-21819798 | MS.gene058001:CDS | 45.0% |
| ! | CCATTGCGGGTTAAACGTAA+AGG | + | chr8.3:21820637-21820656 | MS.gene058001:CDS | 45.0% |
| ! | GTGGATTGTGGTAGTACTGA+TGG | + | chr8.3:21818618-21818637 | MS.gene058001:CDS | 45.0% |
| ! | TAGCATGAGTGTACTGACCT+TGG | - | chr8.3:21820063-21820082 | None:intergenic | 45.0% |
| ! | TCAATGATGATGCAGGTGTG+AGG | + | chr8.3:21819069-21819088 | MS.gene058001:CDS | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr8.3:21819199-21819218 | MS.gene058001:CDS | 45.0% |
| ! | TTTTCCCTACAACTCGTCAC+AGG | + | chr8.3:21819597-21819616 | MS.gene058001:intron | 45.0% |
| !! | GAAGTGTGTGTTGGGTTGAT+GGG | - | chr8.3:21821615-21821634 | None:intergenic | 45.0% |
| !! | GCAAGAAGCACTAAATCTCG+CGG | + | chr8.3:21821313-21821332 | MS.gene058001:intron | 45.0% |
| !! | TGAAGTGTGTGTTGGGTTGA+TGG | - | chr8.3:21821616-21821635 | None:intergenic | 45.0% |
| !! | TGTGGTAGTACTGATGGTGA+AGG | + | chr8.3:21818624-21818643 | MS.gene058001:CDS | 45.0% |
| ACCACCTGTGACGAGTTGTA+GGG | - | chr8.3:21819604-21819623 | None:intergenic | 50.0% | |
| ATACCAGCCCTAGAAAGGCA+AGG | + | chr8.3:21818994-21819013 | MS.gene058001:CDS | 50.0% | |
| CAGCAAGCACACACACACAT+AGG | + | chr8.3:21821556-21821575 | MS.gene058001:CDS | 50.0% | |
| CTCGTCACAGGTGGTGTTTA+TGG | + | chr8.3:21819609-21819628 | MS.gene058001:intron | 50.0% | |
| GCACTAAATCTCGCGGCAAA+AGG | + | chr8.3:21821320-21821339 | MS.gene058001:intron | 50.0% | |
| GCTACAAACAGCAAAACCGC+TGG | + | chr8.3:21821531-21821550 | MS.gene058001:intron | 50.0% | |
| GTGTTGGAGGACGTGTTAGT+TGG | + | chr8.3:21820172-21820191 | MS.gene058001:CDS | 50.0% | |
| ! | CTTGGATGTGGGTTGCTATC+AGG | + | chr8.3:21819455-21819474 | MS.gene058001:intron | 50.0% |
| ! | GGTCTGCGGTTGTGGTTTTT+GGG | - | chr8.3:21821594-21821613 | None:intergenic | 50.0% |
| ! | TGGGGTGTTACGCATATTGG+CGG | - | chr8.3:21821361-21821380 | None:intergenic | 50.0% |
| !! | TGCGGTTGTGGTTTTTGGGA+AGG | - | chr8.3:21821590-21821609 | None:intergenic | 50.0% |
| CACCACCTGTGACGAGTTGT+AGG | - | chr8.3:21819605-21819624 | None:intergenic | 55.0% | |
| GAGAAAAGGACGAGATGGGG+AGG | + | chr8.3:21818800-21818819 | MS.gene058001:CDS | 55.0% | |
| GCCCTCCACAGTGTTCAATG+AGG | - | chr8.3:21820134-21820153 | None:intergenic | 55.0% | |
| TCCCTACAACTCGTCACAGG+TGG | + | chr8.3:21819600-21819619 | MS.gene058001:intron | 55.0% | |
| ! | GGGTCTGCGGTTGTGGTTTT+TGG | - | chr8.3:21821595-21821614 | None:intergenic | 55.0% |
| !! | CAACCTTGCCTTTCTAGGGC+TGG | - | chr8.3:21819000-21819019 | None:intergenic | 55.0% |
| !! | GTGTTGGGTTGATGGGTCTG+CGG | - | chr8.3:21821608-21821627 | None:intergenic | 55.0% |
| ACGACAGCTCAGCATTGCGG+CGG | + | chr8.3:21821673-21821692 | MS.gene058001:CDS | 60.0% | |
| GCCACGACAGCTCAGCATTG+CGG | + | chr8.3:21821670-21821689 | MS.gene058001:CDS | 60.0% | |
| ! | TTGCCAGGCACTGTGCGAGT+TGG | - | chr8.3:21821699-21821718 | None:intergenic | 60.0% |
| !! | GGTTGATGGGTCTGCGGTTG+TGG | - | chr8.3:21821602-21821621 | None:intergenic | 60.0% |
| !! | GTGTGTGCTTGCTGTCCCAG+CGG | - | chr8.3:21821550-21821569 | None:intergenic | 60.0% |
| GCCGCAATGCTGAGCTGTCG+TGG | - | chr8.3:21821674-21821693 | None:intergenic | 65.0% | |
| CGGCCAACTCGCACAGTGCC+TGG | + | chr8.3:21821693-21821712 | MS.gene058001:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21818597 | 21821726 | 21818597 | ID=MS.gene058001 |
| chr8.3 | mRNA | 21818597 | 21821726 | 21818597 | ID=MS.gene058001.t1;Parent=MS.gene058001 |
| chr8.3 | exon | 21818597 | 21819301 | 21818597 | ID=MS.gene058001.t1.exon1;Parent=MS.gene058001.t1 |
| chr8.3 | CDS | 21818597 | 21819301 | 21818597 | ID=cds.MS.gene058001.t1;Parent=MS.gene058001.t1 |
| chr8.3 | exon | 21819686 | 21820753 | 21819686 | ID=MS.gene058001.t1.exon2;Parent=MS.gene058001.t1 |
| chr8.3 | CDS | 21819686 | 21820753 | 21819686 | ID=cds.MS.gene058001.t1;Parent=MS.gene058001.t1 |
| chr8.3 | exon | 21820833 | 21820886 | 21820833 | ID=MS.gene058001.t1.exon3;Parent=MS.gene058001.t1 |
| chr8.3 | CDS | 21820833 | 21820886 | 21820833 | ID=cds.MS.gene058001.t1;Parent=MS.gene058001.t1 |
| chr8.3 | exon | 21821532 | 21821726 | 21821532 | ID=MS.gene058001.t1.exon4;Parent=MS.gene058001.t1 |
| chr8.3 | CDS | 21821532 | 21821726 | 21821532 | ID=cds.MS.gene058001.t1;Parent=MS.gene058001.t1 |
| Gene Sequence |
| Protein sequence |
