AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058212

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058212.t1 MTR_2g034600 94.853 544 25 1 3 543 17 560 0.0 995
MS.gene058212.t1 MTR_2g034600 96.970 495 15 0 49 543 1 495 0.0 983
MS.gene058212.t1 MTR_2g034600 94.118 544 25 2 3 543 17 556 0.0 979
MS.gene058212.t1 MTR_5g041630 33.937 221 140 5 329 544 87 306 5.20e-31 122
MS.gene058212.t1 MTR_6g003960 30.189 265 179 4 270 530 325 587 9.78e-31 127
MS.gene058212.t1 MTR_5g068860 29.455 275 184 6 265 532 213 484 2.07e-29 122
MS.gene058212.t1 MTR_5g068860 22.340 282 170 6 259 536 139 375 5.11e-12 68.9
MS.gene058212.t1 MTR_1g115415 29.474 285 189 6 259 535 175 455 4.47e-29 120
MS.gene058212.t1 MTR_1g115415 22.727 264 178 5 237 478 67 326 1.45e-12 70.5
MS.gene058212.t1 MTR_2g049780 31.405 242 151 6 309 536 70 310 4.24e-27 112
MS.gene058212.t1 MTR_4g070060 25.260 289 207 7 259 540 309 595 1.40e-26 114
MS.gene058212.t1 MTR_4g070060 25.000 256 179 5 292 538 271 522 1.28e-19 92.8
MS.gene058212.t1 MTR_4g070060 29.949 197 135 3 256 450 378 573 1.74e-14 76.6
MS.gene058212.t1 MTR_4g084630 26.007 273 196 4 265 531 47 319 7.16e-26 108
MS.gene058212.t1 MTR_4g084630 24.424 217 153 3 335 543 10 223 8.51e-13 70.1
MS.gene058212.t1 MTR_4g084630 27.389 157 112 2 255 409 109 265 4.21e-12 67.8
MS.gene058212.t1 MTR_5g094610 31.140 228 142 6 263 481 230 451 7.39e-25 108
MS.gene058212.t1 MTR_5g094610 27.468 233 139 7 318 526 177 403 1.91e-17 85.9
MS.gene058212.t1 MTR_5g094610 29.016 193 132 4 255 443 258 449 1.81e-16 82.8
MS.gene058212.t1 MTR_2g067230 29.333 225 147 5 315 534 86 303 2.63e-22 98.6
MS.gene058212.t1 MTR_3g092710 24.383 324 193 12 263 542 187 502 2.91e-19 91.3
MS.gene058212.t1 MTR_8g105560 24.781 343 200 8 256 542 155 495 3.47e-17 85.1
MS.gene058212.t1 MTR_8g105560 23.860 285 183 7 259 535 122 380 4.81e-12 68.9
MS.gene058212.t1 MTR_7g081270 29.756 205 132 5 335 530 78 279 1.16e-15 78.2
MS.gene058212.t1 MTR_4g119580 24.275 276 183 8 263 527 81 341 1.67e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058212.t1 AT4G14605 63.677 446 151 4 96 531 24 468 0.0 561
MS.gene058212.t1 AT4G14605 63.677 446 151 4 96 531 24 468 0.0 561
MS.gene058212.t1 AT2G21710 28.912 294 194 7 259 542 316 604 1.65e-32 132
MS.gene058212.t1 AT2G21710 30.366 191 130 3 256 444 385 574 3.39e-13 72.8
MS.gene058212.t1 AT2G21710 27.402 281 184 7 125 404 306 567 4.71e-12 69.3
MS.gene058212.t1 AT2G44020 28.037 321 185 6 258 535 143 460 9.82e-30 123
MS.gene058212.t1 AT4G38160 27.372 274 186 5 269 532 52 322 5.06e-27 112
MS.gene058212.t1 AT4G38160 30.719 153 103 3 255 404 110 262 6.10e-14 73.6
MS.gene058212.t1 AT4G38160 27.372 274 186 5 269 532 52 322 5.06e-27 112
MS.gene058212.t1 AT4G38160 30.719 153 103 3 255 404 110 262 6.10e-14 73.6
MS.gene058212.t1 AT1G78930 28.125 256 179 3 279 530 320 574 9.14e-27 114
MS.gene058212.t1 AT4G38160 27.372 274 186 5 269 532 52 322 1.08e-26 112
MS.gene058212.t1 AT4G38160 30.719 153 103 3 255 404 110 262 7.99e-14 73.6
MS.gene058212.t1 AT4G38160 27.372 274 186 5 269 532 52 322 1.20e-26 112
MS.gene058212.t1 AT4G38160 30.719 153 103 3 255 404 110 262 1.00e-13 73.6
MS.gene058212.t1 AT2G34620 31.250 240 150 6 309 534 56 294 1.83e-25 107
MS.gene058212.t1 AT2G34620 28.972 214 143 7 237 446 66 274 2.53e-11 65.5
MS.gene058212.t1 AT2G03050 32.353 204 131 6 337 534 70 272 1.21e-23 101
MS.gene058212.t1 AT2G03050 25.346 217 140 8 235 446 53 252 6.06e-11 63.9
MS.gene058212.t1 AT2G03050 32.353 204 131 6 337 534 71 273 1.22e-23 101
MS.gene058212.t1 AT2G03050 25.346 217 140 8 235 446 54 253 5.79e-11 63.9
MS.gene058212.t1 AT4G02990 26.923 286 191 7 258 532 214 492 3.99e-23 103
MS.gene058212.t1 AT4G02990 25.000 224 150 4 233 442 111 330 4.02e-14 75.5
MS.gene058212.t1 AT4G02990 26.923 286 191 7 258 532 214 492 3.99e-23 103
MS.gene058212.t1 AT4G02990 25.000 224 150 4 233 442 111 330 4.02e-14 75.5
MS.gene058212.t1 AT2G21710 27.642 246 163 7 259 494 316 556 4.74e-23 103
MS.gene058212.t1 AT2G21710 25.229 218 156 2 295 505 245 462 5.07e-15 78.6
MS.gene058212.t1 AT2G21710 27.888 251 164 6 125 374 306 540 4.38e-12 68.9
MS.gene058212.t1 AT2G21710 31.847 157 104 3 256 410 385 540 4.99e-12 68.9
MS.gene058212.t1 AT2G21710 27.755 245 162 7 259 493 316 555 8.80e-23 102
MS.gene058212.t1 AT2G21710 25.229 218 156 2 295 505 245 462 4.02e-15 78.6
MS.gene058212.t1 AT2G21710 31.847 157 104 3 256 410 385 540 4.42e-12 68.9
MS.gene058212.t1 AT2G21710 28.000 250 163 6 125 373 306 539 4.74e-12 68.9
MS.gene058212.t1 AT3G18870 27.962 211 128 5 334 530 68 268 4.99e-20 90.9
MS.gene058212.t1 AT5G55580 25.333 225 159 6 263 481 223 444 1.28e-18 89.4
MS.gene058212.t1 AT5G55580 27.551 196 133 4 255 444 251 443 1.40e-17 86.3
MS.gene058212.t1 AT5G55580 23.922 255 184 7 261 507 186 438 1.63e-16 82.8
MS.gene058212.t1 AT5G55580 26.267 217 131 7 333 526 186 396 6.72e-13 71.6
MS.gene058212.t1 AT5G55580 25.000 188 131 5 335 512 223 410 2.28e-12 69.7
MS.gene058212.t1 AT5G55580 25.333 225 159 6 263 481 117 338 2.48e-18 87.4
MS.gene058212.t1 AT5G55580 27.551 196 133 4 255 444 145 337 1.80e-17 85.1
MS.gene058212.t1 AT5G55580 23.922 255 184 7 261 507 80 332 2.60e-16 81.3
MS.gene058212.t1 AT5G55580 26.267 217 131 7 333 526 80 290 7.25e-13 70.9
MS.gene058212.t1 AT5G55580 25.000 188 131 5 335 512 117 304 2.73e-12 68.9
MS.gene058212.t1 AT2G36000 28.571 196 127 5 346 534 122 311 5.06e-17 82.8
MS.gene058212.t1 AT2G36000 28.571 196 127 5 346 534 122 311 8.59e-17 82.0
MS.gene058212.t1 AT5G54180 25.090 279 168 9 256 530 247 488 1.94e-14 76.3
MS.gene058212.t1 AT5G55580 26.452 155 111 3 263 414 223 377 5.71e-14 74.3
MS.gene058212.t1 AT5G55580 24.747 198 128 6 333 515 186 377 2.76e-12 68.9
MS.gene058212.t1 AT1G79220 30.769 143 92 3 259 399 149 286 6.30e-12 68.2

Find 120 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAAAACTTGGTACCTTTC+AGG 0.159283 2.4:-56134356 MS.gene058212:intron
TTCAATTGTCCACAAAATTT+TGG 0.188550 2.4:-56133530 MS.gene058212:CDS
ATGAAATTCTTTGAATCTTT+AGG 0.194746 2.4:-56133788 MS.gene058212:CDS
AATTTAACCAGCTCAGATTT+TGG 0.213106 2.4:+56133341 None:intergenic
TGAAATTCTTTGAATCTTTA+GGG 0.230459 2.4:-56133787 MS.gene058212:CDS
GGTTACACCGTGGAAGAAAT+TGG 0.280461 2.4:-56133455 MS.gene058212:CDS
TTATCCTTAACGGGTGGATT+TGG 0.281395 2.4:+56134142 None:intergenic
TTCTCATTATCCTCACTAAA+AGG 0.287136 2.4:-56133856 MS.gene058212:CDS
GCAGCTGCTGGTGGTGAGTT+GGG 0.314129 2.4:+56136000 None:intergenic
TTGTGTTACGGGCTTTATAT+TGG 0.339450 2.4:+56133493 None:intergenic
GAGAGAAGGTGATCAATAAA+AGG 0.346069 2.4:+56134395 None:intergenic
GCTGGTGGTGAGTTGGGTGG+TGG 0.351488 2.4:+56136006 None:intergenic
CTAGGATTGGGAGGTGGAAT+TGG 0.358395 2.4:+56134109 None:intergenic
TGCGTCAGATTTATCCTTAA+CGG 0.363432 2.4:+56134132 None:intergenic
AAAGAAAATGCAAGTTGGTT+AGG 0.364177 2.4:-56133177 None:intergenic
GGGATTATGATTATGAGATA+TGG 0.366062 2.4:-56133434 MS.gene058212:CDS
CTGAGAATTTGATGCCGAAA+TGG 0.384614 2.4:-56133388 MS.gene058212:CDS
GTGAGAACAATGGCAGAAAT+TGG 0.386760 2.4:+56136033 None:intergenic
TGCAGCTGCTGGTGGTGAGT+TGG 0.390922 2.4:+56135999 None:intergenic
ATTGTGGGGCGGTTGAATTA+AGG 0.395948 2.4:+56135897 None:intergenic
TAAAGATTCAAAGAATTTCA+TGG 0.398908 2.4:+56133790 None:intergenic
CTATCCAAATCCACCCGTTA+AGG 0.401472 2.4:-56134146 MS.gene058212:CDS
TTTACCCTCCAAACTATAGT+AGG 0.403290 2.4:+56133931 None:intergenic
ACACTGTAACTAACAATAGT+TGG 0.403606 2.4:+56133620 None:intergenic
AACCCTATTGGCAGCAGAAA+AGG 0.405382 2.4:-56134504 MS.gene058212:CDS
GGTGAGATTACTGTTGAATC+AGG 0.408489 2.4:-56133249 MS.gene058212:CDS
AGCTTACAACTCTTGAGATC+AGG 0.409547 2.4:-56134240 MS.gene058212:CDS
ATAGCAGCGGGTGCAGCTGC+TGG 0.415077 2.4:+56135988 None:intergenic
TGGTGAGTTGGGTGGTGGGT+AGG 0.416600 2.4:+56136011 None:intergenic
GAGTGGAATATCACTGCAAA+TGG 0.423567 2.4:+56135948 None:intergenic
GCGTCAGATTTATCCTTAAC+GGG 0.424748 2.4:+56134133 None:intergenic
AAACTATAGTAGGCAAAAGC+TGG 0.426748 2.4:+56133941 None:intergenic
CTGGTGGTGAGTTGGGTGGT+GGG 0.427996 2.4:+56136007 None:intergenic
GCAATGTACTTCCGTTCTCT+AGG 0.440973 2.4:-56133575 MS.gene058212:CDS
ACTGTTGCCTCCAACCCTAT+TGG 0.443356 2.4:-56134516 MS.gene058212:CDS
CAATGTACTTCCGTTCTCTA+GGG 0.451044 2.4:-56133574 MS.gene058212:CDS
TTGATGACGGAGGAAGGTTC+CGG 0.452496 2.4:+56136070 None:intergenic
GTTACACCGTGGAAGAAATT+GGG 0.454315 2.4:-56133454 MS.gene058212:CDS
GTTCCGGTAGCTGTGGCTAT+AGG 0.457503 2.4:+56136086 None:intergenic
TGCTATAAGTTAGCAGGGCT+GGG 0.457629 2.4:+56133726 None:intergenic
GTGCTATAAGTTAGCAGGGC+TGG 0.458589 2.4:+56133725 None:intergenic
CTTCTGAGACGCCAAATTCG+TGG 0.460800 2.4:+56133672 None:intergenic
GTGGACAATTGAATAGAAGA+AGG 0.464746 2.4:+56133540 None:intergenic
TCCTCATATTGCTTATCTGA+TGG 0.465202 2.4:-56134011 MS.gene058212:CDS
TGAGAATTTGATGCCGAAAT+GGG 0.466974 2.4:-56133387 MS.gene058212:CDS
GAATGGATACTGACCAGGTT+AGG 0.467843 2.4:-56133982 MS.gene058212:CDS
TCTGCTGCCAATAGGGTTGG+AGG 0.469021 2.4:+56134509 None:intergenic
ATGGCAGAAATTGGCTTTGA+CGG 0.470595 2.4:+56136042 None:intergenic
CTCAACTTCCTTCCTCTACA+AGG 0.472025 2.4:-56134700 MS.gene058212:CDS
GTCTACCGCTGGACTAGGAT+TGG 0.479245 2.4:+56134096 None:intergenic
GGACGAAGATTTCCCTCAGC+AGG 0.482343 2.4:+56134031 None:intergenic
TCTGCGTGCTATAAGTTAGC+AGG 0.485788 2.4:+56133720 None:intergenic
AAAATAAAGAAAATGCAAGT+TGG 0.492928 2.4:-56133182 MS.gene058212:CDS
TTAGAGTCTACCGCTGGACT+AGG 0.493917 2.4:+56134091 None:intergenic
AGTAGGCAAAAGCTGGGAAT+CGG 0.495536 2.4:+56133948 None:intergenic
ACTAAAAGGCCTCAATTATG+TGG 0.498259 2.4:-56133842 MS.gene058212:CDS
CACTGTAACTAACAATAGTT+GGG 0.500646 2.4:+56133621 None:intergenic
AGAATGAGGTGTTGTCGAGA+TGG 0.507161 2.4:-56136209 MS.gene058212:intron
AGGGGTTGACAAGGAACAAT+GGG 0.507393 2.4:-56133768 MS.gene058212:CDS
TCTACCGCTGGACTAGGATT+GGG 0.511945 2.4:+56134097 None:intergenic
CATAATCCCAATTTCTTCCA+CGG 0.513081 2.4:+56133448 None:intergenic
AAGTTAGCAGGGCTGGGAAA+CGG 0.513243 2.4:+56133732 None:intergenic
CGTTCTCTAGGGGTTGATGT+TGG 0.515834 2.4:-56133563 MS.gene058212:CDS
AAACAAGGTTAATACAGCCT+TGG 0.517039 2.4:+56134475 None:intergenic
AACTATAGTAGGCAAAAGCT+GGG 0.542556 2.4:+56133942 None:intergenic
GGATTACCCAAAATCTGAGC+TGG 0.542893 2.4:-56133348 MS.gene058212:CDS
TTTGCCTACTATAGTTTGGA+GGG 0.546380 2.4:-56133935 MS.gene058212:CDS
AAGAAGACCCTTGTAGAGGA+AGG 0.547271 2.4:+56134692 None:intergenic
TCCATCAGATAAGCAATATG+AGG 0.550329 2.4:+56134010 None:intergenic
TTCACTCTAGACACAAAACT+TGG 0.551240 2.4:-56134367 MS.gene058212:CDS
TAGAGTGAAGCTTTGAGAGA+AGG 0.552642 2.4:+56134381 None:intergenic
TCACCTATAGCCACAGCTAC+CGG 0.559126 2.4:-56136089 MS.gene058212:CDS
GCAGAAATTGGCTTTGACGG+TGG 0.560510 2.4:+56136045 None:intergenic
TTATCTGATGGAACTCGGAA+TGG 0.563103 2.4:-56133999 MS.gene058212:CDS
GCTTACAACTCTTGAGATCA+GGG 0.568117 2.4:-56134239 MS.gene058212:CDS
GCAGCGGGTGCAGCTGCTGG+TGG 0.568432 2.4:+56135991 None:intergenic
TGCAACAACAAACATAGCAG+CGG 0.568924 2.4:+56135975 None:intergenic
GCTGCTGGTGGTGAGTTGGG+TGG 0.569013 2.4:+56136003 None:intergenic
GATTCAAAGAATTTCATGGT+GGG 0.572446 2.4:+56133794 None:intergenic
AGAAATTCTAGTGGATGTAG+TGG 0.577348 2.4:-56134173 MS.gene058212:CDS
TAGTGTGGAATTGAAATTGT+GGG 0.578779 2.4:+56135882 None:intergenic
AGCAGAAAAGGAAGAAGCCA+AGG 0.582063 2.4:-56134492 MS.gene058212:CDS
AATGTACTTCCGTTCTCTAG+GGG 0.585781 2.4:-56133573 MS.gene058212:CDS
ACTTTCTTAGAGTCTACCGC+TGG 0.586538 2.4:+56134085 None:intergenic
GAAATTCTTTGAATCTTTAG+GGG 0.590570 2.4:-56133786 MS.gene058212:CDS
GGAGGGTAAAATTAAGCCAG+TGG 0.594688 2.4:-56133918 MS.gene058212:CDS
TGAATCTTTAGGGGTTGACA+AGG 0.598289 2.4:-56133777 MS.gene058212:CDS
AGAAAAGAAGACCCTTGTAG+AGG 0.600416 2.4:+56134688 None:intergenic
GCAACAACAAACATAGCAGC+GGG 0.601619 2.4:+56135976 None:intergenic
ATTGCTTATCTGATGGAACT+CGG 0.604771 2.4:-56134004 MS.gene058212:CDS
GGCGCATAATAGTCCTAACC+TGG 0.607951 2.4:+56133969 None:intergenic
AGACTGATTCCACATAATTG+AGG 0.610049 2.4:+56133833 None:intergenic
TATTGTTAGTTACAGTGTAG+AGG 0.611669 2.4:-56133615 MS.gene058212:CDS
ACCGCTGGACTAGGATTGGG+AGG 0.615626 2.4:+56134100 None:intergenic
TAGGGGTTGACAAGGAACAA+TGG 0.616153 2.4:-56133769 MS.gene058212:CDS
GAGGAAGGTTCCGGTAGCTG+TGG 0.616413 2.4:+56136079 None:intergenic
CAACATCAACCCCTAGAGAA+CGG 0.618334 2.4:+56133564 None:intergenic
CTGCGTGCTATAAGTTAGCA+GGG 0.619373 2.4:+56133721 None:intergenic
ACTCGGAATGGATACTGACC+AGG 0.623274 2.4:-56133987 MS.gene058212:CDS
GAATCACTTTACGAAGAGCA+TGG 0.623459 2.4:-56134196 MS.gene058212:CDS
ATAGTGTGGAATTGAAATTG+TGG 0.623674 2.4:+56135881 None:intergenic
GGGTTTGAGCAATGCAAATG+CGG 0.625434 2.4:-56134441 MS.gene058212:CDS
TATACCACTCACTCGAGACA+CGG 0.626260 2.4:+56134057 None:intergenic
TTGTAGCAAACAAACCTGAA+AGG 0.629612 2.4:+56134342 None:intergenic
TCAGATTTATCCTTAACGGG+TGG 0.631816 2.4:+56134136 None:intergenic
GACGAAGATTTCCCTCAGCA+GGG 0.635800 2.4:+56134032 None:intergenic
AAAGCCGTGTCTCGAGTGAG+TGG 0.646198 2.4:-56134061 MS.gene058212:CDS
ACCTCCCAATCCTAGTCCAG+CGG 0.646786 2.4:-56134101 MS.gene058212:CDS
GCTGGACTAGGATTGGGAGG+TGG 0.647159 2.4:+56134103 None:intergenic
AGAGCATGGAGAAATTCTAG+TGG 0.648996 2.4:-56134182 MS.gene058212:CDS
GAGTGGTATAGACCCTGCTG+AGG 0.656302 2.4:-56134044 MS.gene058212:CDS
GAACGGAAGTACATTGCTGT+CGG 0.657257 2.4:+56133581 None:intergenic
TCAACTTCCTTCCTCTACAA+GGG 0.663747 2.4:-56134699 MS.gene058212:CDS
AGTGGTATAGACCCTGCTGA+GGG 0.666006 2.4:-56134043 MS.gene058212:CDS
GTGGAATTGAAATTGTGGGG+CGG 0.683773 2.4:+56135886 None:intergenic
AGATTCAAAGAATTTCATGG+TGG 0.685200 2.4:+56133793 None:intergenic
GGCGTCTCAGAAGAGAACAT+AGG 0.686324 2.4:-56133662 MS.gene058212:CDS
TGGTGGGTAGGTGAGAACAA+TGG 0.719204 2.4:+56136023 None:intergenic
AGTGTGGAATTGAAATTGTG+GGG 0.742839 2.4:+56135883 None:intergenic
CTTGGAGAGAGGTTACACCG+TGG 0.810527 2.4:-56133465 MS.gene058212:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAATAAGTCAAAA+CGG - chr2.4:56134351-56134370 MS.gene058212:intron 10.0%
!!! AAAGAAAAAAAAAAGCATAA+TGG + chr2.4:56134565-56134584 None:intergenic 15.0%
!!! ATAATGAGAATTTTTTCTTT+TGG + chr2.4:56135518-56135537 None:intergenic 15.0%
!!! TAGTTTTTACATACAAAAAA+TGG - chr2.4:56133208-56133227 MS.gene058212:CDS 15.0%
!!! TCAATACAATATTTCTATAT+TGG + chr2.4:56133969-56133988 None:intergenic 15.0%
!! AAAATAAAGAAAATGCAAGT+TGG - chr2.4:56136202-56136221 MS.gene058212:intron 20.0%
!! ATGAAATTCTTTGAATCTTT+AGG - chr2.4:56135596-56135615 MS.gene058212:intron 20.0%
!! ATTAAGTGATTATAACATAG+AGG - chr2.4:56134143-56134162 MS.gene058212:CDS 20.0%
!! ATTATAGTATTACTGAAACT+CGG - chr2.4:56134626-56134645 MS.gene058212:intron 20.0%
!! CAAATTCTCAATAAAGATAA+GGG - chr2.4:56133627-56133646 MS.gene058212:CDS 20.0%
!! TAAAGATTCAAAGAATTTCA+TGG + chr2.4:56135597-56135616 None:intergenic 20.0%
!! TCAAATTCTCAATAAAGATA+AGG - chr2.4:56133626-56133645 MS.gene058212:CDS 20.0%
!! TGAAATTCTTTGAATCTTTA+GGG - chr2.4:56135597-56135616 MS.gene058212:intron 20.0%
!! TTAAGTGATTATAACATAGA+GGG - chr2.4:56134144-56134163 MS.gene058212:CDS 20.0%
!!! AATACTACATAATTTCCTTT+TGG - chr2.4:56133253-56133272 MS.gene058212:CDS 20.0%
!!! AGTCAATAATTTGTTGTTAT+CGG - chr2.4:56134023-56134042 MS.gene058212:CDS 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG + chr2.4:56134125-56134144 None:intergenic 20.0%
!!! TAATAACTTTCCTTTTACAT+TGG - chr2.4:56135080-56135099 MS.gene058212:intron 20.0%
! AAACTGTATCCAAAAAATTG+AGG + chr2.4:56136070-56136089 None:intergenic 25.0%
! AACTGTATCCAAAAAATTGA+GGG + chr2.4:56136069-56136088 None:intergenic 25.0%
! ACTTACGAAAAAACAACTTT+AGG + chr2.4:56134388-56134407 None:intergenic 25.0%
! AGAAGTTAGTTGTTTAAGAA+TGG - chr2.4:56133859-56133878 MS.gene058212:CDS 25.0%
! AGACATTGATAGATGAAAAT+AGG + chr2.4:56133564-56133583 None:intergenic 25.0%
! CCAAATCTTAAATTTGGATT+TGG + chr2.4:56133908-56133927 None:intergenic 25.0%
! GAAATTCTTTGAATCTTTAG+GGG - chr2.4:56135598-56135617 MS.gene058212:intron 25.0%
! GCATTTCCAAATCTTAAATT+TGG + chr2.4:56133914-56133933 None:intergenic 25.0%
! TAAGTGATTATAACATAGAG+GGG - chr2.4:56134145-56134164 MS.gene058212:CDS 25.0%
!! CCAAATCCAAATTTAAGATT+TGG - chr2.4:56133905-56133924 MS.gene058212:CDS 25.0%
!! GAGAAAGTTTTCATCTTTAT+TGG + chr2.4:56133468-56133487 None:intergenic 25.0%
!! TAAGCAAAAGTCTACATTTT+AGG - chr2.4:56133725-56133744 MS.gene058212:CDS 25.0%
!! TTCAATTGTCCACAAAATTT+TGG - chr2.4:56135854-56135873 MS.gene058212:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr2.4:56133824-56133843 MS.gene058212:CDS 25.0%
!!! ATCTTTATTGGTTTTAAGAG+TGG + chr2.4:56133456-56133475 None:intergenic 25.0%
!!! CCACTAGTTTTTTTTTTGAA+GGG + chr2.4:56134085-56134104 None:intergenic 25.0%
!!! GTTAAATTCCCTCAATTTTT+TGG - chr2.4:56136058-56136077 MS.gene058212:CDS 25.0%
!!! TAACCTTGTTTTTGAAGAAA+CGG - chr2.4:56134921-56134940 MS.gene058212:intron 25.0%
!!! TATCCTAAAAGCACTTTTTT+TGG + chr2.4:56134286-56134305 None:intergenic 25.0%
AAATAGGCCCTAATTCTTAA+AGG + chr2.4:56134109-56134128 None:intergenic 30.0%
AAGTGATTATAACATAGAGG+GGG - chr2.4:56134146-56134165 MS.gene058212:CDS 30.0%
AATAGGCCCTAATTCTTAAA+GGG + chr2.4:56134108-56134127 None:intergenic 30.0%
AATGTTAGTAATTAGCTGAC+AGG + chr2.4:56134256-56134275 None:intergenic 30.0%
ACACTGTAACTAACAATAGT+TGG + chr2.4:56135767-56135786 None:intergenic 30.0%
AGATTCAAAGAATTTCATGG+TGG + chr2.4:56135594-56135613 None:intergenic 30.0%
AGTGTAAGAGAAAAATAGTG+TGG + chr2.4:56133520-56133539 None:intergenic 30.0%
ATAGTGTGGAATTGAAATTG+TGG + chr2.4:56133506-56133525 None:intergenic 30.0%
ATTCGTTTGAGCTTATCAAT+TGG + chr2.4:56134507-56134526 None:intergenic 30.0%
CACTGTAACTAACAATAGTT+GGG + chr2.4:56135766-56135785 None:intergenic 30.0%
CATTCATTTAATGATGCATG+TGG - chr2.4:56133750-56133769 MS.gene058212:CDS 30.0%
CCCTTCAAAAAAAAAACTAG+TGG - chr2.4:56134082-56134101 MS.gene058212:CDS 30.0%
CTCCAAGAAAAATTGTGTTA+CGG + chr2.4:56135906-56135925 None:intergenic 30.0%
CTGATGCAAAATCTTCATAT+TGG + chr2.4:56134662-56134681 None:intergenic 30.0%
GATTCAAAGAATTTCATGGT+GGG + chr2.4:56135593-56135612 None:intergenic 30.0%
GGGATTATGATTATGAGATA+TGG - chr2.4:56135950-56135969 MS.gene058212:CDS 30.0%
GTCAAAAAGTAATCCCATTT+CGG + chr2.4:56136013-56136032 None:intergenic 30.0%
TAGTGTGGAATTGAAATTGT+GGG + chr2.4:56133505-56133524 None:intergenic 30.0%
TATTGTTAGTTACAGTGTAG+AGG - chr2.4:56135769-56135788 MS.gene058212:intron 30.0%
TCCAAGAAAAATTGTGTTAC+GGG + chr2.4:56135905-56135924 None:intergenic 30.0%
TCTCATTGACGTAATAATCA+GGG - chr2.4:56135117-56135136 MS.gene058212:intron 30.0%
TTCTCATTATCCTCACTAAA+AGG - chr2.4:56135528-56135547 MS.gene058212:intron 30.0%
TTTAAGAATTAGGGCCTATT+TGG - chr2.4:56134108-56134127 MS.gene058212:CDS 30.0%
! AATTTAACCAGCTCAGATTT+TGG + chr2.4:56136046-56136065 None:intergenic 30.0%
! ATGCTAAGACCAAAATTTTG+TGG + chr2.4:56135866-56135885 None:intergenic 30.0%
! ATTTAACCAGCTCAGATTTT+GGG + chr2.4:56136045-56136064 None:intergenic 30.0%
! CAATATGAAGATTTTGCATC+AGG - chr2.4:56134660-56134679 MS.gene058212:intron 30.0%
! GATAGGTTGAAATCAACTTA+TGG - chr2.4:56134428-56134447 MS.gene058212:CDS 30.0%
! TTCTTTTCTCAGGAAAAATC+TGG - chr2.4:56134710-56134729 MS.gene058212:CDS 30.0%
! TTTTCTCTTACACTTCCATA+AGG - chr2.4:56133526-56133545 MS.gene058212:CDS 30.0%
!!! AAATTTTGGTCTTAGCATTG+AGG - chr2.4:56135868-56135887 MS.gene058212:CDS 30.0%
!!! AACCTTGTTTTTGAAGAAAC+GGG - chr2.4:56134922-56134941 MS.gene058212:intron 30.0%
!!! ATGGGATTACTTTTTGACTA+TGG - chr2.4:56136015-56136034 MS.gene058212:CDS 30.0%
!!! CTTTTAGCTTTCTTAACTAG+TGG - chr2.4:56134059-56134078 MS.gene058212:CDS 30.0%
!!! GCCACTAGTTTTTTTTTTGA+AGG + chr2.4:56134086-56134105 None:intergenic 30.0%
!!! GTTGAGTTTTTTCTTGAACT+TGG - chr2.4:56135488-56135507 MS.gene058212:intron 30.0%
!!! TAAAAGCACTTTTTTTGGAC+AGG + chr2.4:56134281-56134300 None:intergenic 30.0%
!!! TGTCCAAAAAAAGTGCTTTT+AGG - chr2.4:56134280-56134299 MS.gene058212:intron 30.0%
AAACAAGGTTAATACAGCCT+TGG + chr2.4:56134912-56134931 None:intergenic 35.0%
AAACTATAGTAGGCAAAAGC+TGG + chr2.4:56135446-56135465 None:intergenic 35.0%
AACTATAGTAGGCAAAAGCT+GGG + chr2.4:56135445-56135464 None:intergenic 35.0%
ACTAAAAGGCCTCAATTATG+TGG - chr2.4:56135542-56135561 MS.gene058212:intron 35.0%
AGGAAAGAGATTGTACCTTA+TGG + chr2.4:56133544-56133563 None:intergenic 35.0%
AGTATCCGAGTTCAAAACTA+CGG - chr2.4:56134213-56134232 MS.gene058212:CDS 35.0%
AGTGATTATAACATAGAGGG+GGG - chr2.4:56134147-56134166 MS.gene058212:CDS 35.0%
AGTGTGGAATTGAAATTGTG+GGG + chr2.4:56133504-56133523 None:intergenic 35.0%
ATAAGCATTAGACCTTCCAT+TGG - chr2.4:56134806-56134825 MS.gene058212:intron 35.0%
ATTGCTTATCTGATGGAACT+CGG - chr2.4:56135380-56135399 MS.gene058212:intron 35.0%
CATAATCCCAATTTCTTCCA+CGG + chr2.4:56135939-56135958 None:intergenic 35.0%
CCTATCTTCATAAGCTATCA+AGG + chr2.4:56134414-56134433 None:intergenic 35.0%
GAGAGAAGGTGATCAATAAA+AGG + chr2.4:56134992-56135011 None:intergenic 35.0%
GGTTGCATGCTATTCATATA+AGG + chr2.4:56134544-56134563 None:intergenic 35.0%
GTCTCATTGACGTAATAATC+AGG - chr2.4:56135116-56135135 MS.gene058212:intron 35.0%
GTGGACAATTGAATAGAAGA+AGG + chr2.4:56135847-56135866 None:intergenic 35.0%
TAGATGTTGCAATTGACATG+AGG - chr2.4:56134759-56134778 MS.gene058212:intron 35.0%
TATTAGTTACATACACCCTC+CGG - chr2.4:56133693-56133712 MS.gene058212:CDS 35.0%
TCAAGAAAAAACTCAACCAC+TGG + chr2.4:56135485-56135504 None:intergenic 35.0%
TCCATCAGATAAGCAATATG+AGG + chr2.4:56135377-56135396 None:intergenic 35.0%
TCCTCATATTGCTTATCTGA+TGG - chr2.4:56135373-56135392 MS.gene058212:intron 35.0%
TGAGAATTTGATGCCGAAAT+GGG - chr2.4:56135997-56136016 MS.gene058212:CDS 35.0%
TGCGTCAGATTTATCCTTAA+CGG + chr2.4:56135255-56135274 None:intergenic 35.0%
TTAGCAGGATCCAATGTAAA+AGG + chr2.4:56135093-56135112 None:intergenic 35.0%
TTCACTCTAGACACAAAACT+TGG - chr2.4:56135017-56135036 MS.gene058212:intron 35.0%
TTGTAGCAAACAAACCTGAA+AGG + chr2.4:56135045-56135064 None:intergenic 35.0%
TTTACCCTCCAAACTATAGT+AGG + chr2.4:56135456-56135475 None:intergenic 35.0%
TTTGCCTACTATAGTTTGGA+GGG - chr2.4:56135449-56135468 MS.gene058212:intron 35.0%
! ACACAATTTTTCTTGGAGAG+AGG - chr2.4:56135908-56135927 MS.gene058212:CDS 35.0%
! AGAAATTCTAGTGGATGTAG+TGG - chr2.4:56135211-56135230 MS.gene058212:intron 35.0%
! AGACTGATTCCACATAATTG+AGG + chr2.4:56135554-56135573 None:intergenic 35.0%
! AGCTTTTGCCTACTATAGTT+TGG - chr2.4:56135445-56135464 MS.gene058212:intron 35.0%
! ATAATTGAGGCCTTTTAGTG+AGG + chr2.4:56135541-56135560 None:intergenic 35.0%
! CCTTGATAGCTTATGAAGAT+AGG - chr2.4:56134411-56134430 MS.gene058212:CDS 35.0%
! CTTTTGCTTATATCAGTGAC+CGG + chr2.4:56133715-56133734 None:intergenic 35.0%
! GTAGATTTTCTCCACGAATT+TGG - chr2.4:56135701-56135720 MS.gene058212:intron 35.0%
! TAGTGGCCCTTTAAGAATTA+GGG - chr2.4:56134099-56134118 MS.gene058212:CDS 35.0%
! TTGTGTTACGGGCTTTATAT+TGG + chr2.4:56135894-56135913 None:intergenic 35.0%
! TTTTGCCTACTATAGTTTGG+AGG - chr2.4:56135448-56135467 MS.gene058212:intron 35.0%
!!! ACCTTGTTTTTGAAGAAACG+GGG - chr2.4:56134923-56134942 MS.gene058212:intron 35.0%
AACTTCTTACATACACCCTC+CGG + chr2.4:56133846-56133865 None:intergenic 40.0%
AATGTACTTCCGTTCTCTAG+GGG - chr2.4:56135811-56135830 MS.gene058212:intron 40.0%
ACCCCGTTTCTTCAAAAACA+AGG + chr2.4:56134927-56134946 None:intergenic 40.0%
AGAAAAGAAGACCCTTGTAG+AGG + chr2.4:56134699-56134718 None:intergenic 40.0%
AGAGCATGGAGAAATTCTAG+TGG - chr2.4:56135202-56135221 MS.gene058212:intron 40.0%
AGCTTACAACTCTTGAGATC+AGG - chr2.4:56135144-56135163 MS.gene058212:intron 40.0%
ATGCACGCGTGAAAAATTCT+GGG - chr2.4:56136113-56136132 MS.gene058212:intron 40.0%
ATTATAACATAGAGGGGGGT+GGG - chr2.4:56134151-56134170 MS.gene058212:CDS 40.0%
CAAACGAATCAATCCAAGCA+GGG - chr2.4:56134518-56134537 MS.gene058212:CDS 40.0%
CAATGTACTTCCGTTCTCTA+GGG - chr2.4:56135810-56135829 MS.gene058212:intron 40.0%
CACAAAACTTGGTACCTTTC+AGG - chr2.4:56135028-56135047 MS.gene058212:intron 40.0%
CTGAGAATTTGATGCCGAAA+TGG - chr2.4:56135996-56136015 MS.gene058212:CDS 40.0%
GAATCACTTTACGAAGAGCA+TGG - chr2.4:56135188-56135207 MS.gene058212:intron 40.0%
GAGTGGAATATCACTGCAAA+TGG + chr2.4:56133439-56133458 None:intergenic 40.0%
GCGTCAGATTTATCCTTAAC+GGG + chr2.4:56135254-56135273 None:intergenic 40.0%
GCTTACAACTCTTGAGATCA+GGG - chr2.4:56135145-56135164 MS.gene058212:intron 40.0%
GGTGAGATTACTGTTGAATC+AGG - chr2.4:56136135-56136154 MS.gene058212:intron 40.0%
GTGAGAACAATGGCAGAAAT+TGG + chr2.4:56133354-56133373 None:intergenic 40.0%
GTTACACCGTGGAAGAAATT+GGG - chr2.4:56135930-56135949 MS.gene058212:CDS 40.0%
TATGCACGCGTGAAAAATTC+TGG - chr2.4:56136112-56136131 MS.gene058212:intron 40.0%
TATTCATATAAGGCCCTGCT+TGG + chr2.4:56134534-56134553 None:intergenic 40.0%
TCAAACGAATCAATCCAAGC+AGG - chr2.4:56134517-56134536 MS.gene058212:CDS 40.0%
TCAACTTCCTTCCTCTACAA+GGG - chr2.4:56134685-56134704 MS.gene058212:CDS 40.0%
TCAGATTTATCCTTAACGGG+TGG + chr2.4:56135251-56135270 None:intergenic 40.0%
TGAGACAAAGCAATGCCAAA+AGG + chr2.4:56133271-56133290 None:intergenic 40.0%
TGCAACAACAAACATAGCAG+CGG + chr2.4:56133412-56133431 None:intergenic 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr2.4:56133828-56133847 MS.gene058212:CDS 40.0%
TTATCTGATGGAACTCGGAA+TGG - chr2.4:56135385-56135404 MS.gene058212:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr2.4:56133827-56133846 MS.gene058212:CDS 40.0%
! CTAGTGGCCCTTTAAGAATT+AGG - chr2.4:56134098-56134117 MS.gene058212:CDS 40.0%
! GCCCGTAACACAATTTTTCT+TGG - chr2.4:56135901-56135920 MS.gene058212:CDS 40.0%
! TACAAGGGTCTTCTTTTCTC+AGG - chr2.4:56134700-56134719 MS.gene058212:CDS 40.0%
! TGAATCTTTAGGGGTTGACA+AGG - chr2.4:56135607-56135626 MS.gene058212:intron 40.0%
! TTATCCTTAACGGGTGGATT+TGG + chr2.4:56135245-56135264 None:intergenic 40.0%
! TTCCTTTTCTGCTGCCAATA+GGG + chr2.4:56134885-56134904 None:intergenic 40.0%
! TTTTTCACGCGTGCATATCT+CGG + chr2.4:56136109-56136128 None:intergenic 40.0%
!! ATGGCAGAAATTGGCTTTGA+CGG + chr2.4:56133345-56133364 None:intergenic 40.0%
!! TAGAGTGAAGCTTTGAGAGA+AGG + chr2.4:56135006-56135025 None:intergenic 40.0%
!!! TTTGACGGTGGTTTTGATGA+CGG + chr2.4:56133330-56133349 None:intergenic 40.0%
AAATGCTAACCAGTGTCCAG+TGG - chr2.4:56133928-56133947 MS.gene058212:CDS 45.0%
AACCCTATTGGCAGCAGAAA+AGG - chr2.4:56134880-56134899 MS.gene058212:intron 45.0%
AAGAAGACCCTTGTAGAGGA+AGG + chr2.4:56134695-56134714 None:intergenic 45.0%
ACTTTCTTAGAGTCTACCGC+TGG + chr2.4:56135302-56135321 None:intergenic 45.0%
AGCAGAAAAGGAAGAAGCCA+AGG - chr2.4:56134892-56134911 MS.gene058212:intron 45.0%
AGGGGTTGACAAGGAACAAT+GGG - chr2.4:56135616-56135635 MS.gene058212:intron 45.0%
AGTAGGCAAAAGCTGGGAAT+CGG + chr2.4:56135439-56135458 None:intergenic 45.0%
ATTGTGGGGCGGTTGAATTA+AGG + chr2.4:56133490-56133509 None:intergenic 45.0%
CAACATCAACCCCTAGAGAA+CGG + chr2.4:56135823-56135842 None:intergenic 45.0%
CGTCAATGAGACTGATTAGC+AGG + chr2.4:56135108-56135127 None:intergenic 45.0%
CTATCCAAATCCACCCGTTA+AGG - chr2.4:56135238-56135257 MS.gene058212:intron 45.0%
CTCAACTTCCTTCCTCTACA+AGG - chr2.4:56134684-56134703 MS.gene058212:CDS 45.0%
CTGCGTGCTATAAGTTAGCA+GGG + chr2.4:56135666-56135685 None:intergenic 45.0%
GAATGGATACTGACCAGGTT+AGG - chr2.4:56135402-56135421 MS.gene058212:intron 45.0%
GATTATAACATAGAGGGGGG+TGG - chr2.4:56134150-56134169 MS.gene058212:CDS 45.0%
GCAACAACAAACATAGCAGC+GGG + chr2.4:56133411-56133430 None:intergenic 45.0%
GCAATGTACTTCCGTTCTCT+AGG - chr2.4:56135809-56135828 MS.gene058212:intron 45.0%
GGAGGGTAAAATTAAGCCAG+TGG - chr2.4:56135466-56135485 MS.gene058212:intron 45.0%
GGATTACCCAAAATCTGAGC+TGG - chr2.4:56136036-56136055 MS.gene058212:CDS 45.0%
GGGTTTGAGCAATGCAAATG+CGG - chr2.4:56134943-56134962 MS.gene058212:intron 45.0%
GGTTACACCGTGGAAGAAAT+TGG - chr2.4:56135929-56135948 MS.gene058212:CDS 45.0%
GTGGAATTGAAATTGTGGGG+CGG + chr2.4:56133501-56133520 None:intergenic 45.0%
TAGGGGTTGACAAGGAACAA+TGG - chr2.4:56135615-56135634 MS.gene058212:intron 45.0%
TATACCACTCACTCGAGACA+CGG + chr2.4:56135330-56135349 None:intergenic 45.0%
TCTGCGTGCTATAAGTTAGC+AGG + chr2.4:56135667-56135686 None:intergenic 45.0%
TGCACGCGTGAAAAATTCTG+GGG - chr2.4:56136114-56136133 MS.gene058212:intron 45.0%
TGCTATAAGTTAGCAGGGCT+GGG + chr2.4:56135661-56135680 None:intergenic 45.0%
TGCTTATATCAGTGACCGGA+GGG + chr2.4:56133711-56133730 None:intergenic 45.0%
TTATAACATAGAGGGGGGTG+GGG - chr2.4:56134152-56134171 MS.gene058212:CDS 45.0%
TTGCTTATATCAGTGACCGG+AGG + chr2.4:56133712-56133731 None:intergenic 45.0%
! CTTCCTTTTCTGCTGCCAAT+AGG + chr2.4:56134886-56134905 None:intergenic 45.0%
! GAACGGAAGTACATTGCTGT+CGG + chr2.4:56135806-56135825 None:intergenic 45.0%
! GAGTACAAAGCACCAATGGA+AGG + chr2.4:56134821-56134840 None:intergenic 45.0%
! GTCTGAGTACAAAGCACCAA+TGG + chr2.4:56134825-56134844 None:intergenic 45.0%
! TTTTCTGCTGCCAATAGGGT+TGG + chr2.4:56134881-56134900 None:intergenic 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG - chr2.4:56134176-56134195 MS.gene058212:CDS 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG - chr2.4:56134177-56134196 MS.gene058212:CDS 45.0%
!!! GATCGCCGTAGTTTTGAACT+CGG + chr2.4:56134221-56134240 None:intergenic 45.0%
AAGTTAGCAGGGCTGGGAAA+CGG + chr2.4:56135655-56135674 None:intergenic 50.0%
ACTCGGAATGGATACTGACC+AGG - chr2.4:56135397-56135416 MS.gene058212:intron 50.0%
ACTGTTGCCTCCAACCCTAT+TGG - chr2.4:56134868-56134887 MS.gene058212:intron 50.0%
AGTGGTATAGACCCTGCTGA+GGG - chr2.4:56135341-56135360 MS.gene058212:intron 50.0%
CTAGGATTGGGAGGTGGAAT+TGG + chr2.4:56135278-56135297 None:intergenic 50.0%
GACGAAGATTTCCCTCAGCA+GGG + chr2.4:56135355-56135374 None:intergenic 50.0%
GGCGCATAATAGTCCTAACC+TGG + chr2.4:56135418-56135437 None:intergenic 50.0%
GGCGTCTCAGAAGAGAACAT+AGG - chr2.4:56135722-56135741 MS.gene058212:intron 50.0%
GTGCTATAAGTTAGCAGGGC+TGG + chr2.4:56135662-56135681 None:intergenic 50.0%
TCACCTATAGCCACAGCTAC+CGG - chr2.4:56133295-56133314 MS.gene058212:CDS 50.0%
TTAGAGTCTACCGCTGGACT+AGG + chr2.4:56135296-56135315 None:intergenic 50.0%
! TCTACCGCTGGACTAGGATT+GGG + chr2.4:56135290-56135309 None:intergenic 50.0%
! TGGTGGGTAGGTGAGAACAA+TGG + chr2.4:56133364-56133383 None:intergenic 50.0%
!! CGTTCTCTAGGGGTTGATGT+TGG - chr2.4:56135821-56135840 MS.gene058212:intron 50.0%
!! CTTCTGAGACGCCAAATTCG+TGG + chr2.4:56135715-56135734 None:intergenic 50.0%
!! GCAGAAATTGGCTTTGACGG+TGG + chr2.4:56133342-56133361 None:intergenic 50.0%
!! TTGATGACGGAGGAAGGTTC+CGG + chr2.4:56133317-56133336 None:intergenic 50.0%
!!! GTGGTTTTGATGACGGAGGA+AGG + chr2.4:56133323-56133342 None:intergenic 50.0%
AAAGCCGTGTCTCGAGTGAG+TGG - chr2.4:56135323-56135342 MS.gene058212:intron 55.0%
ACCTCCCAATCCTAGTCCAG+CGG - chr2.4:56135283-56135302 MS.gene058212:intron 55.0%
CTTGGAGAGAGGTTACACCG+TGG - chr2.4:56135919-56135938 MS.gene058212:CDS 55.0%
GAGTGGTATAGACCCTGCTG+AGG - chr2.4:56135340-56135359 MS.gene058212:intron 55.0%
GGACGAAGATTTCCCTCAGC+AGG + chr2.4:56135356-56135375 None:intergenic 55.0%
GTTCCGGTAGCTGTGGCTAT+AGG + chr2.4:56133301-56133320 None:intergenic 55.0%
GTTTCCTCGACGAGTTCCAC+TGG + chr2.4:56133947-56133966 None:intergenic 55.0%
TCTGCTGCCAATAGGGTTGG+AGG + chr2.4:56134878-56134897 None:intergenic 55.0%
! GTCTACCGCTGGACTAGGAT+TGG + chr2.4:56135291-56135310 None:intergenic 55.0%
!!! GACGGTGGTTTTGATGACGG+AGG + chr2.4:56133327-56133346 None:intergenic 55.0%
CGACGAGTTCCACTGGACAC+TGG + chr2.4:56133940-56133959 None:intergenic 60.0%
GAGGAAGGTTCCGGTAGCTG+TGG + chr2.4:56133308-56133327 None:intergenic 60.0%
GTGTCCAGTGGAACTCGTCG+AGG - chr2.4:56133940-56133959 MS.gene058212:CDS 60.0%
! ACCGCTGGACTAGGATTGGG+AGG + chr2.4:56135287-56135306 None:intergenic 60.0%
! CTGGTGGTGAGTTGGGTGGT+GGG + chr2.4:56133380-56133399 None:intergenic 60.0%
! GCAGCTGCTGGTGGTGAGTT+GGG + chr2.4:56133387-56133406 None:intergenic 60.0%
! GCTGGACTAGGATTGGGAGG+TGG + chr2.4:56135284-56135303 None:intergenic 60.0%
! TGCAGCTGCTGGTGGTGAGT+TGG + chr2.4:56133388-56133407 None:intergenic 60.0%
!! TGGTGAGTTGGGTGGTGGGT+AGG + chr2.4:56133376-56133395 None:intergenic 60.0%
ATAGCAGCGGGTGCAGCTGC+TGG + chr2.4:56133399-56133418 None:intergenic 65.0%
! GCTGCTGGTGGTGAGTTGGG+TGG + chr2.4:56133384-56133403 None:intergenic 65.0%
! GCTGGTGGTGAGTTGGGTGG+TGG + chr2.4:56133381-56133400 None:intergenic 65.0%
GGGGGGTGGGGTAGCTCAAC+TGG - chr2.4:56134164-56134183 MS.gene058212:CDS 70.0%
GCAGCGGGTGCAGCTGCTGG+TGG + chr2.4:56133396-56133415 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 56133178 56136228 56133178 ID=MS.gene058212
chr2.4 mRNA 56133178 56136228 56133178 ID=MS.gene058212.t1;Parent=MS.gene058212
chr2.4 exon 56136210 56136228 56136210 ID=MS.gene058212.t1.exon1;Parent=MS.gene058212.t1
chr2.4 CDS 56136210 56136228 56136210 ID=cds.MS.gene058212.t1;Parent=MS.gene058212.t1
chr2.4 exon 56135859 56136114 56135859 ID=MS.gene058212.t1.exon2;Parent=MS.gene058212.t1
chr2.4 CDS 56135859 56136114 56135859 ID=cds.MS.gene058212.t1;Parent=MS.gene058212.t1
chr2.4 exon 56134675 56134736 56134675 ID=MS.gene058212.t1.exon3;Parent=MS.gene058212.t1
chr2.4 CDS 56134675 56134736 56134675 ID=cds.MS.gene058212.t1;Parent=MS.gene058212.t1
chr2.4 exon 56134357 56134563 56134357 ID=MS.gene058212.t1.exon4;Parent=MS.gene058212.t1
chr2.4 CDS 56134357 56134563 56134357 ID=cds.MS.gene058212.t1;Parent=MS.gene058212.t1
chr2.4 exon 56133178 56134268 56133178 ID=MS.gene058212.t1.exon5;Parent=MS.gene058212.t1
chr2.4 CDS 56133178 56134268 56133178 ID=cds.MS.gene058212.t1;Parent=MS.gene058212.t1
Gene Sequence

>MS.gene058212

ATGAGGTGTTGTCGAGATGGTAAAACTTTTTAGTTTTTACATACAAAAAATGGATTGAAAATAATTTTAGAAAGAAATACTACATAATTTCCTTTTGGCATTGCTTTGTCTCAGCTCTCACCTATAGCCACAGCTACCGGAACCTTCCTCCGTCATCAAAACCACCGTCAAAGCCAATTTCTGCCATTGTTCTCACCTACCCACCACCCAACTCACCACCAGCAGCTGCACCCGCTGCTATGTTTGTTGTTGCATCTTCCATTTGCAGTGATATTCCACTCTTAAAACCAATAAAGATGAAAACTTTCTCCTTAATTCAACCGCCCCACAATTTCAATTCCACACTATTTTTCTCTTACACTTCCATAAGGTACAATCTCTTTCCTATTTTCATCTATCAATGTCTTTTTTTTTTCTTTCTCATTCTTTCATTTTGCACATTTTAATATCAAATTCTCAATAAAGATAAGGGTGTATGTGAATTGTGAATAGTAGCTATGTTAAAGTTAGTTATGTATTAGTTACATACACCCTCCGGTCACTGATATAAGCAAAAGTCTACATTTTAGGTTCATTCATTTAATGATGCATGTGGTTTATAATAAAGACTATGTGTATCATTAAATGAATGAATCTAAAATGTAGATTTTTGCTTATATTAGTGACCGGAGGGTGTATGTAAGAAGTTAGTTGTTTAAGAATGGTAATAGTGAATGTGAATTTATTGCCAAATCCAAATTTAAGATTTGGAAATGCTAACCAGTGTCCAGTGGAACTCGTCGAGGAAACCAATATAGAAATATTGTATTGAGAAGTGTGAAAAATTGTATATTTAACTTTTTGAAAGTCAATAATTTGTTGTTATCGGTGAAATTTTTTTACTTTTAGCTTTCTTAACTAGTGGCCCTTCAAAAAAAAAACTAGTGGCCCTTTAAGAATTAGGGCCTATTTGGATAAACAACTTAATTAAGTGATTATAACATAGAGGGGGGTGGGGTAGCTCAACTGGTTTGAGCTAAGGGTTGATGCAACTAGAGTATCCGAGTTCAAAACTACGGCGATCAAAAAATACTAACCTGTCAGCTAATTACTAACATTTGCCTGTCCAAAAAAAGTGCTTTTAGGATAGACGCTTATCGTATAAGTGCTTATATGTAAGCTATTTTTGTAACAAAAAATTAAATAAGTCAAAACGGTTTTTATATATCCTAAAGTTGTTTTTTCGTAAGTTATCCTTGATAGCTTATGAAGATAGGTTGAAATCAACTTATGGACATGTCATAAATTGTTTTCGTAAGCTCTCTCATAGTTTTACAAGTGCTTATGCCAATTGATAAGCTCAAACGAATCAATCCAAGCAGGGCCTTATATGAATAGCATGCAACCATTATGCTTTTTTTTTTCTTTCTTCTCTTCAAATCTCTCTTATTTTATCTTATATATTTATGATTATAGTATTACTGAAACTCGGAATTTTTTCTCCAATATGAAGATTTTGCATCAGGACTCAACTTCCTTCCTCTACAAGGGTCTTCTTTTCTCAGGAAAAATCTGGTATGCAATCTTGTTCAAAGTTTCATTTAGATGTTGCAATTGACATGAGGTTTATTTAATAATGTACTATTCTAATAAGCATTAGACCTTCCATTGGTGCTTTGTACTCAGACACAGATGAGTCATTAAACGTAAAACTGTTGCCTCCAACCCTATTGGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTAACCTTGTTTTTGAAGAAACGGGGTTTGAGCAATGCAAATGCGGCAAGAACGATTAACAAGTCAGATCCTTTTATTGATCACCTTCTCTCAAAGCTTCACTCTAGACACAAAACTTGGTACCTTTCAGGTTTGTTTGCTACAATTAATCACTTCTATTTAATAACTTTCCTTTTACATTGGATCCTGCTAATCAGTCTCATTGACGTAATAATCAGGGAGAGAGCTTACAACTCTTGAGATCAGGGATGCTCTTATCTCTTATCTCGAATCACTTTACGAAGAGCATGGAGAAATTCTAGTGGATGTAGTGGAAAACTATCCAAATCCACCCGTTAAGGATAAATCTGACGCACCAATTCCACCTCCCAATCCTAGTCCAGCGGTAGACTCTAAGAAAGTTAAAGCCGTGTCTCGAGTGAGTGGTATAGACCCTGCTGAGGGAAATCTTCGTCCTCATATTGCTTATCTGATGGAACTCGGAATGGATACTGACCAGGTTAGGACTATTATGCGCCGATTCCCAGCTTTTGCCTACTATAGTTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTACCAAAAGAAAAAATTCTCATTATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTATCTAAAAATCTTAAGCCCACCATGAAATTCTTTGAATCTTTAGGGGTTGACAAGGAACAATGGGCGAAAGTGATCTACCGTTTCCCAGCCCTGCTAACTTATAGCACGCAGAAGATTAATGAAAGTGTAGATTTTCTCCACGAATTTGGCGTCTCAGAAGAGAACATAGGTAAGATTTTAACTCGCTGCCCAACTATTGTTAGTTACAGTGTAGAGGACAATCTTCGACCGACAGCAATGTACTTCCGTTCTCTAGGGGTTGATGTTGGCCTTCTTCTATTCAATTGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATATAAAGCCCGTAACACAATTTTTCTTGGAGAGAGGTTACACCGTGGAAGAAATTGGGATTATGATTATGAGATATGGAATGTTGTACACATTCAGCTTGACTGAGAATTTGATGCCGAAATGGGATTACTTTTTGACTATGGATTACCCAAAATCTGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAGTTTAGAGCAAAGAATTAAACCGAGATATGCACGCGTGAAAAATTCTGGGGTGAGATTACTGTTGAATCAGGTTCTTTCACTGTCAAGCAGCAACTTTGAAGAGATCTTAAGAAAGAAAATAAAGAAAATGCAAGTTGGTTAG
Protein sequence

>MS.gene058212.t1

MRCCRDALTYSHSYRNLPPSSKPPSKPISAIVLTYPPPNSPPAAAPAAMFVVASSICSDIPLLKPIKMKTFSLIQPPHNFNSTLFFSYTSIRFCIRTQLPSSTRVFFSQEKSDTDESLNVKLLPPTLLAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSRHKTWYLSGRELTTLEIRDALISYLESLYEEHGEILVDVVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVSRVSGIDPAEGNLRPHIAYLMELGMDTDQVRTIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKILIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESVDFLHEFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGVDVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTVEEIGIMIMRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYARVKNSGVRLLLNQVLSLSSSNFEEILRKKIKKMQVG