Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058285.t1 | KEH20223.1 | 56.2 | 324 | 131 | 4 | 1 | 323 | 150 | 463 | 2.00E-59 | 239.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058285.t1 | Q9FLX8 | 42.9 | 147 | 73 | 6 | 160 | 298 | 142 | 285 | 3.6e-20 | 100.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058285.t1 | A0A072TTN4 | 56.2 | 324 | 131 | 4 | 1 | 323 | 150 | 463 | 1.5e-59 | 239.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene058285.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058285.t1 | MTR_2g024380 | 40.185 | 433 | 117 | 9 | 1 | 323 | 70 | 470 | 5.45e-86 | 266 |
MS.gene058285.t1 | MTR_8g069935 | 52.905 | 327 | 137 | 7 | 1 | 323 | 150 | 463 | 3.77e-84 | 261 |
MS.gene058285.t1 | MTR_8g067635 | 42.204 | 372 | 163 | 4 | 1 | 322 | 166 | 535 | 1.25e-75 | 241 |
MS.gene058285.t1 | MTR_8g067650 | 41.254 | 303 | 118 | 4 | 71 | 322 | 226 | 519 | 1.67e-65 | 215 |
MS.gene058285.t1 | MTR_6g053200 | 37.183 | 355 | 138 | 6 | 39 | 323 | 197 | 536 | 4.36e-62 | 206 |
MS.gene058285.t1 | MTR_2g024350 | 42.291 | 227 | 51 | 3 | 177 | 323 | 1 | 227 | 1.62e-51 | 170 |
MS.gene058285.t1 | MTR_7g105000 | 51.208 | 207 | 86 | 5 | 1 | 204 | 146 | 340 | 1.06e-38 | 140 |
MS.gene058285.t1 | MTR_1g099600 | 47.706 | 109 | 54 | 3 | 150 | 258 | 153 | 258 | 1.66e-26 | 107 |
MS.gene058285.t1 | MTR_8g028565 | 47.000 | 100 | 50 | 2 | 161 | 260 | 134 | 230 | 4.21e-23 | 98.2 |
MS.gene058285.t1 | MTR_7g079040 | 46.602 | 103 | 52 | 2 | 158 | 260 | 130 | 229 | 1.48e-22 | 96.3 |
MS.gene058285.t1 | MTR_2g032030 | 39.669 | 121 | 61 | 3 | 149 | 258 | 221 | 340 | 6.21e-21 | 93.2 |
MS.gene058285.t1 | MTR_2g032030 | 39.669 | 121 | 61 | 3 | 149 | 258 | 221 | 340 | 2.05e-20 | 92.0 |
MS.gene058285.t1 | MTR_8g098945 | 40.351 | 114 | 66 | 2 | 185 | 298 | 130 | 241 | 6.63e-20 | 88.2 |
MS.gene058285.t1 | MTR_4g127040 | 45.783 | 83 | 42 | 1 | 162 | 241 | 220 | 302 | 8.77e-20 | 88.6 |
MS.gene058285.t1 | MTR_8g087000 | 46.429 | 84 | 38 | 1 | 184 | 267 | 77 | 153 | 1.04e-19 | 87.0 |
MS.gene058285.t1 | MTR_4g094908 | 42.593 | 108 | 55 | 1 | 141 | 241 | 216 | 323 | 1.12e-19 | 88.6 |
MS.gene058285.t1 | MTR_8g087000 | 46.429 | 84 | 38 | 1 | 184 | 267 | 76 | 152 | 1.42e-19 | 86.7 |
MS.gene058285.t1 | MTR_7g104980 | 36.041 | 197 | 47 | 4 | 206 | 323 | 19 | 215 | 1.81e-19 | 85.5 |
MS.gene058285.t1 | MTR_5g016610 | 45.783 | 83 | 42 | 1 | 162 | 241 | 174 | 256 | 2.67e-19 | 86.3 |
MS.gene058285.t1 | MTR_7g109600 | 40.171 | 117 | 57 | 2 | 135 | 244 | 3 | 113 | 3.09e-19 | 85.9 |
MS.gene058285.t1 | MTR_2g016770 | 35.714 | 154 | 90 | 5 | 156 | 302 | 2 | 153 | 1.01e-18 | 83.6 |
MS.gene058285.t1 | MTR_2g016770 | 39.669 | 121 | 69 | 3 | 184 | 302 | 27 | 145 | 1.19e-18 | 83.2 |
MS.gene058285.t1 | MTR_2g083870 | 57.377 | 61 | 26 | 0 | 184 | 244 | 80 | 140 | 2.02e-18 | 83.6 |
MS.gene058285.t1 | MTR_1g070455 | 53.968 | 63 | 29 | 0 | 181 | 243 | 290 | 352 | 4.45e-18 | 84.3 |
MS.gene058285.t1 | MTR_1g009613 | 43.210 | 81 | 45 | 1 | 161 | 241 | 240 | 319 | 2.37e-17 | 82.0 |
MS.gene058285.t1 | MTR_3g108960 | 42.683 | 82 | 46 | 1 | 163 | 243 | 292 | 373 | 7.39e-17 | 80.9 |
MS.gene058285.t1 | MTR_4g130900 | 46.250 | 80 | 41 | 2 | 166 | 244 | 340 | 418 | 1.02e-16 | 80.9 |
MS.gene058285.t1 | MTR_0117s0040 | 50.769 | 65 | 32 | 0 | 178 | 242 | 68 | 132 | 2.16e-16 | 77.8 |
MS.gene058285.t1 | MTR_7g100510 | 52.632 | 76 | 34 | 2 | 180 | 255 | 185 | 258 | 6.76e-16 | 78.2 |
MS.gene058285.t1 | MTR_7g100510 | 42.424 | 66 | 37 | 1 | 179 | 244 | 356 | 420 | 4.06e-14 | 73.2 |
MS.gene058285.t1 | MTR_7g011820 | 47.222 | 72 | 37 | 1 | 173 | 244 | 399 | 469 | 1.38e-15 | 77.8 |
MS.gene058285.t1 | MTR_7g011820 | 46.970 | 66 | 33 | 2 | 180 | 245 | 224 | 287 | 4.11e-13 | 70.1 |
MS.gene058285.t1 | MTR_5g094430 | 43.056 | 72 | 40 | 1 | 173 | 244 | 353 | 423 | 3.29e-15 | 76.6 |
MS.gene058285.t1 | MTR_5g094430 | 44.444 | 72 | 38 | 2 | 183 | 254 | 199 | 268 | 3.99e-12 | 67.4 |
MS.gene058285.t1 | MTR_5g094430 | 43.056 | 72 | 40 | 1 | 173 | 244 | 241 | 311 | 4.82e-15 | 75.9 |
MS.gene058285.t1 | MTR_5g094430 | 44.444 | 72 | 38 | 2 | 183 | 254 | 87 | 156 | 5.96e-12 | 66.6 |
MS.gene058285.t1 | MTR_5g094430 | 43.056 | 72 | 40 | 1 | 173 | 244 | 219 | 289 | 5.09e-15 | 75.5 |
MS.gene058285.t1 | MTR_5g094430 | 44.444 | 72 | 38 | 2 | 183 | 254 | 65 | 134 | 5.92e-12 | 66.2 |
MS.gene058285.t1 | MTR_3g009470 | 41.758 | 91 | 49 | 3 | 183 | 272 | 279 | 366 | 1.29e-14 | 74.7 |
MS.gene058285.t1 | MTR_3g056100 | 41.667 | 72 | 41 | 1 | 173 | 244 | 391 | 461 | 1.36e-14 | 74.7 |
MS.gene058285.t1 | MTR_3g056100 | 45.946 | 74 | 38 | 2 | 180 | 253 | 239 | 310 | 3.95e-13 | 70.5 |
MS.gene058285.t1 | MTR_3g009470 | 41.758 | 91 | 49 | 3 | 183 | 272 | 279 | 366 | 1.39e-14 | 74.7 |
MS.gene058285.t1 | MTR_3g009470 | 35.354 | 99 | 52 | 2 | 157 | 244 | 457 | 554 | 2.29e-12 | 68.2 |
MS.gene058285.t1 | MTR_3g056100 | 41.667 | 72 | 41 | 1 | 173 | 244 | 404 | 474 | 1.51e-14 | 74.7 |
MS.gene058285.t1 | MTR_3g056100 | 45.946 | 74 | 38 | 2 | 180 | 253 | 239 | 310 | 4.26e-13 | 70.1 |
MS.gene058285.t1 | MTR_3g056100 | 41.667 | 72 | 41 | 1 | 173 | 244 | 247 | 317 | 2.13e-14 | 73.9 |
MS.gene058285.t1 | MTR_3g056100 | 45.946 | 74 | 38 | 2 | 180 | 253 | 95 | 166 | 6.70e-13 | 69.3 |
MS.gene058285.t1 | MTR_3g056100 | 41.667 | 72 | 41 | 1 | 173 | 244 | 260 | 330 | 2.28e-14 | 73.9 |
MS.gene058285.t1 | MTR_3g056100 | 45.946 | 74 | 38 | 2 | 180 | 253 | 95 | 166 | 7.15e-13 | 69.3 |
MS.gene058285.t1 | MTR_3g053330 | 31.387 | 137 | 83 | 2 | 125 | 261 | 203 | 328 | 2.69e-14 | 73.6 |
MS.gene058285.t1 | MTR_5g097490 | 48.485 | 66 | 33 | 1 | 179 | 244 | 247 | 311 | 2.81e-14 | 73.2 |
MS.gene058285.t1 | MTR_2g045360 | 44.615 | 65 | 36 | 0 | 184 | 248 | 211 | 275 | 3.75e-14 | 73.2 |
MS.gene058285.t1 | MTR_5g042920 | 38.889 | 90 | 54 | 1 | 173 | 262 | 309 | 397 | 5.58e-14 | 72.8 |
MS.gene058285.t1 | MTR_5g042920 | 49.231 | 65 | 31 | 2 | 180 | 244 | 147 | 209 | 9.41e-12 | 65.9 |
MS.gene058285.t1 | MTR_2g088000 | 36.036 | 111 | 66 | 2 | 151 | 261 | 321 | 426 | 1.00e-13 | 72.0 |
MS.gene058285.t1 | MTR_3g106060 | 45.614 | 57 | 31 | 0 | 185 | 241 | 139 | 195 | 1.39e-13 | 70.5 |
MS.gene058285.t1 | MTR_5g074400 | 48.333 | 60 | 30 | 1 | 185 | 244 | 421 | 479 | 1.42e-13 | 71.6 |
MS.gene058285.t1 | MTR_5g074400 | 52.381 | 63 | 28 | 2 | 183 | 245 | 242 | 302 | 1.38e-12 | 68.6 |
MS.gene058285.t1 | MTR_4g132430 | 31.298 | 131 | 81 | 3 | 120 | 244 | 60 | 187 | 1.70e-13 | 70.9 |
MS.gene058285.t1 | MTR_4g132430 | 31.298 | 131 | 81 | 3 | 120 | 244 | 194 | 321 | 1.99e-13 | 71.2 |
MS.gene058285.t1 | MTR_7g109800 | 36.170 | 94 | 56 | 3 | 154 | 244 | 112 | 204 | 2.43e-13 | 69.7 |
MS.gene058285.t1 | MTR_4g007060 | 41.538 | 65 | 38 | 0 | 185 | 249 | 129 | 193 | 2.50e-13 | 69.7 |
MS.gene058285.t1 | MTR_7g080020 | 30.328 | 122 | 70 | 3 | 142 | 249 | 437 | 557 | 2.77e-13 | 70.9 |
MS.gene058285.t1 | MTR_7g080020 | 45.205 | 73 | 38 | 2 | 183 | 255 | 279 | 349 | 4.99e-11 | 63.9 |
MS.gene058285.t1 | MTR_1g086790 | 36.667 | 90 | 55 | 2 | 164 | 253 | 139 | 226 | 3.17e-13 | 69.7 |
MS.gene058285.t1 | MTR_4g007060 | 42.188 | 64 | 37 | 0 | 185 | 248 | 163 | 226 | 3.29e-13 | 69.7 |
MS.gene058285.t1 | MTR_4g049790 | 36.145 | 83 | 53 | 0 | 179 | 261 | 307 | 389 | 5.05e-13 | 70.1 |
MS.gene058285.t1 | MTR_3g031220 | 43.750 | 64 | 35 | 1 | 181 | 244 | 362 | 424 | 5.42e-13 | 69.7 |
MS.gene058285.t1 | MTR_3g031220 | 51.613 | 62 | 28 | 2 | 183 | 244 | 197 | 256 | 3.12e-12 | 67.4 |
MS.gene058285.t1 | MTR_7g062220 | 40.698 | 86 | 45 | 3 | 171 | 256 | 113 | 192 | 6.35e-13 | 68.9 |
MS.gene058285.t1 | MTR_7g110720 | 38.462 | 78 | 47 | 1 | 167 | 244 | 200 | 276 | 6.45e-13 | 69.3 |
MS.gene058285.t1 | MTR_7g110720 | 38.462 | 78 | 47 | 1 | 167 | 244 | 173 | 249 | 6.51e-13 | 69.3 |
MS.gene058285.t1 | MTR_1g013790 | 27.778 | 162 | 100 | 4 | 90 | 246 | 14 | 163 | 6.56e-13 | 68.2 |
MS.gene058285.t1 | MTR_4g082580 | 43.750 | 64 | 35 | 1 | 181 | 244 | 275 | 337 | 7.16e-13 | 68.9 |
MS.gene058285.t1 | MTR_4g082580 | 33.010 | 103 | 61 | 2 | 146 | 248 | 114 | 208 | 4.38e-11 | 63.5 |
MS.gene058285.t1 | MTR_2g023930 | 35.000 | 100 | 61 | 3 | 146 | 244 | 269 | 365 | 9.29e-13 | 69.3 |
MS.gene058285.t1 | MTR_4g049760 | 36.145 | 83 | 53 | 0 | 179 | 261 | 285 | 367 | 9.58e-13 | 68.9 |
MS.gene058285.t1 | MTR_7g080000 | 39.024 | 82 | 47 | 3 | 164 | 244 | 412 | 491 | 2.04e-12 | 68.2 |
MS.gene058285.t1 | MTR_3g031220 | 51.613 | 62 | 28 | 2 | 183 | 244 | 197 | 256 | 2.55e-12 | 67.4 |
MS.gene058285.t1 | MTR_4g052030 | 52.727 | 55 | 14 | 1 | 187 | 241 | 8 | 50 | 2.94e-12 | 61.2 |
MS.gene058285.t1 | MTR_1g013760 | 43.860 | 57 | 32 | 0 | 185 | 241 | 141 | 197 | 4.58e-12 | 65.9 |
MS.gene058285.t1 | MTR_7g071120 | 47.143 | 70 | 35 | 2 | 176 | 245 | 158 | 225 | 5.85e-12 | 66.6 |
MS.gene058285.t1 | MTR_4g013260 | 42.424 | 66 | 37 | 1 | 179 | 244 | 331 | 395 | 5.89e-12 | 66.6 |
MS.gene058285.t1 | MTR_4g107970 | 38.462 | 78 | 46 | 1 | 169 | 244 | 161 | 238 | 6.88e-12 | 66.6 |
MS.gene058285.t1 | MTR_4g107970 | 38.462 | 78 | 46 | 1 | 169 | 244 | 238 | 315 | 1.13e-11 | 65.9 |
MS.gene058285.t1 | MTR_2g033820 | 45.000 | 60 | 32 | 1 | 185 | 244 | 204 | 262 | 1.34e-11 | 65.1 |
MS.gene058285.t1 | MTR_2g105060 | 37.805 | 82 | 47 | 1 | 169 | 246 | 75 | 156 | 1.38e-11 | 63.9 |
MS.gene058285.t1 | MTR_4g094588 | 41.429 | 70 | 39 | 2 | 180 | 249 | 175 | 242 | 1.58e-11 | 64.7 |
MS.gene058285.t1 | MTR_2g105060 | 37.805 | 82 | 47 | 1 | 169 | 246 | 150 | 231 | 1.59e-11 | 64.7 |
MS.gene058285.t1 | MTR_7g009730 | 31.858 | 113 | 72 | 3 | 129 | 241 | 169 | 276 | 1.81e-11 | 65.5 |
MS.gene058285.t1 | MTR_1g015140 | 44.262 | 61 | 33 | 1 | 181 | 241 | 99 | 158 | 1.97e-11 | 62.0 |
MS.gene058285.t1 | MTR_4g094412 | 31.250 | 112 | 62 | 2 | 133 | 244 | 198 | 294 | 3.15e-11 | 64.3 |
MS.gene058285.t1 | MTR_5g091390 | 41.538 | 65 | 37 | 1 | 185 | 249 | 158 | 221 | 3.73e-11 | 63.5 |
MS.gene058285.t1 | MTR_3g095040 | 40.625 | 64 | 37 | 1 | 181 | 244 | 115 | 177 | 3.73e-11 | 62.0 |
MS.gene058285.t1 | MTR_4g094412 | 41.667 | 60 | 35 | 0 | 185 | 244 | 244 | 303 | 4.05e-11 | 63.9 |
MS.gene058285.t1 | MTR_4g122530 | 37.681 | 69 | 42 | 1 | 185 | 253 | 209 | 276 | 4.27e-11 | 63.9 |
MS.gene058285.t1 | MTR_5g043880 | 34.314 | 102 | 65 | 2 | 140 | 241 | 81 | 180 | 4.75e-11 | 62.8 |
MS.gene058285.t1 | MTR_8g092010 | 37.349 | 83 | 49 | 2 | 164 | 244 | 86 | 167 | 9.59e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058285.t1 | AT5G52830 | 51.020 | 98 | 46 | 2 | 161 | 258 | 143 | 238 | 6.04e-26 | 106 |
MS.gene058285.t1 | AT4G01250 | 32.850 | 207 | 126 | 6 | 124 | 322 | 72 | 273 | 3.61e-25 | 103 |
MS.gene058285.t1 | AT5G45050 | 38.983 | 118 | 70 | 2 | 161 | 277 | 1017 | 1133 | 1.84e-19 | 89.7 |
MS.gene058285.t1 | AT5G45050 | 38.983 | 118 | 70 | 2 | 161 | 277 | 1156 | 1272 | 1.99e-19 | 89.7 |
MS.gene058285.t1 | AT5G45050 | 38.983 | 118 | 70 | 2 | 161 | 277 | 1128 | 1244 | 2.18e-19 | 89.7 |
MS.gene058285.t1 | AT2G34830 | 42.308 | 104 | 49 | 3 | 159 | 253 | 182 | 283 | 4.00e-19 | 87.8 |
MS.gene058285.t1 | AT2G34830 | 42.308 | 104 | 49 | 3 | 159 | 253 | 191 | 292 | 4.61e-19 | 87.8 |
MS.gene058285.t1 | AT4G23550 | 41.758 | 91 | 52 | 1 | 168 | 258 | 124 | 213 | 7.26e-19 | 85.9 |
MS.gene058285.t1 | AT2G24570 | 53.968 | 63 | 29 | 0 | 181 | 243 | 240 | 302 | 1.01e-18 | 85.5 |
MS.gene058285.t1 | AT4G31550 | 55.738 | 61 | 27 | 0 | 181 | 241 | 243 | 303 | 1.21e-18 | 85.5 |
MS.gene058285.t1 | AT4G31550 | 55.738 | 61 | 27 | 0 | 181 | 241 | 242 | 302 | 1.29e-18 | 85.5 |
MS.gene058285.t1 | AT1G30650 | 42.308 | 104 | 49 | 3 | 159 | 253 | 184 | 285 | 1.29e-18 | 86.3 |
MS.gene058285.t1 | AT1G29280 | 45.055 | 91 | 41 | 1 | 163 | 244 | 44 | 134 | 1.37e-18 | 84.3 |
MS.gene058285.t1 | AT2G23320 | 57.895 | 57 | 24 | 0 | 185 | 241 | 241 | 297 | 1.51e-18 | 85.1 |
MS.gene058285.t1 | AT5G28650 | 47.059 | 85 | 42 | 1 | 162 | 243 | 237 | 321 | 1.71e-18 | 85.1 |
MS.gene058285.t1 | AT3G04670 | 47.059 | 85 | 42 | 1 | 162 | 243 | 237 | 321 | 2.70e-18 | 84.3 |
MS.gene058285.t1 | AT4G24240 | 45.783 | 83 | 42 | 1 | 162 | 241 | 256 | 338 | 3.25e-18 | 84.7 |
MS.gene058285.t1 | AT3G58710 | 51.515 | 66 | 32 | 0 | 184 | 249 | 71 | 136 | 1.55e-17 | 81.6 |
MS.gene058285.t1 | AT3G58710 | 51.515 | 66 | 32 | 0 | 184 | 249 | 70 | 135 | 1.58e-17 | 81.6 |
MS.gene058285.t1 | AT4G30935 | 40.000 | 105 | 58 | 3 | 141 | 244 | 290 | 390 | 9.56e-17 | 80.9 |
MS.gene058285.t1 | AT5G07100 | 34.028 | 144 | 87 | 5 | 112 | 252 | 163 | 301 | 1.03e-16 | 79.7 |
MS.gene058285.t1 | AT5G07100 | 43.056 | 72 | 40 | 1 | 177 | 248 | 110 | 180 | 7.18e-12 | 65.5 |
MS.gene058285.t1 | AT5G07100 | 35.294 | 136 | 80 | 5 | 112 | 244 | 70 | 200 | 1.17e-16 | 77.8 |
MS.gene058285.t1 | AT5G07100 | 43.056 | 72 | 40 | 1 | 177 | 248 | 17 | 87 | 1.46e-11 | 63.5 |
MS.gene058285.t1 | AT5G07100 | 35.294 | 136 | 80 | 5 | 112 | 244 | 70 | 200 | 1.17e-16 | 77.8 |
MS.gene058285.t1 | AT5G07100 | 43.056 | 72 | 40 | 1 | 177 | 248 | 17 | 87 | 1.46e-11 | 63.5 |
MS.gene058285.t1 | AT5G07100 | 35.294 | 136 | 80 | 5 | 112 | 244 | 70 | 200 | 1.17e-16 | 77.8 |
MS.gene058285.t1 | AT5G07100 | 43.056 | 72 | 40 | 1 | 177 | 248 | 17 | 87 | 1.46e-11 | 63.5 |
MS.gene058285.t1 | AT5G07100 | 35.294 | 136 | 80 | 5 | 112 | 244 | 70 | 200 | 1.17e-16 | 77.8 |
MS.gene058285.t1 | AT5G07100 | 43.056 | 72 | 40 | 1 | 177 | 248 | 17 | 87 | 1.46e-11 | 63.5 |
MS.gene058285.t1 | AT2G30590 | 52.381 | 63 | 30 | 0 | 181 | 243 | 310 | 372 | 1.70e-16 | 79.7 |
MS.gene058285.t1 | AT2G04880 | 35.115 | 131 | 66 | 4 | 143 | 260 | 253 | 377 | 8.97e-16 | 78.2 |
MS.gene058285.t1 | AT2G04880 | 35.115 | 131 | 66 | 4 | 143 | 260 | 229 | 353 | 9.68e-16 | 78.2 |
MS.gene058285.t1 | AT3G01080 | 48.485 | 66 | 33 | 1 | 179 | 244 | 339 | 403 | 1.71e-15 | 77.4 |
MS.gene058285.t1 | AT3G01080 | 45.714 | 70 | 36 | 2 | 180 | 249 | 201 | 268 | 8.01e-14 | 72.4 |
MS.gene058285.t1 | AT3G01080 | 48.485 | 66 | 33 | 1 | 179 | 244 | 301 | 365 | 2.22e-15 | 76.6 |
MS.gene058285.t1 | AT3G01080 | 45.714 | 70 | 36 | 2 | 180 | 249 | 163 | 230 | 1.09e-13 | 71.6 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 330 | 400 | 1.31e-14 | 74.7 |
MS.gene058285.t1 | AT4G26640 | 34.146 | 123 | 71 | 3 | 139 | 261 | 134 | 246 | 6.09e-12 | 66.6 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 194 | 264 | 1.31e-14 | 74.3 |
MS.gene058285.t1 | AT4G26640 | 34.454 | 119 | 68 | 3 | 143 | 261 | 2 | 110 | 1.32e-11 | 65.5 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 194 | 264 | 1.31e-14 | 74.3 |
MS.gene058285.t1 | AT4G26640 | 34.454 | 119 | 68 | 3 | 143 | 261 | 2 | 110 | 1.32e-11 | 65.5 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 194 | 264 | 1.31e-14 | 74.3 |
MS.gene058285.t1 | AT4G26640 | 34.454 | 119 | 68 | 3 | 143 | 261 | 2 | 110 | 1.32e-11 | 65.5 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 194 | 264 | 1.31e-14 | 74.3 |
MS.gene058285.t1 | AT4G26640 | 34.454 | 119 | 68 | 3 | 143 | 261 | 2 | 110 | 1.32e-11 | 65.5 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 370 | 440 | 1.49e-14 | 74.7 |
MS.gene058285.t1 | AT4G26640 | 34.146 | 123 | 71 | 3 | 139 | 261 | 174 | 286 | 5.66e-12 | 67.0 |
MS.gene058285.t1 | AT4G26640 | 41.667 | 72 | 41 | 1 | 173 | 244 | 298 | 368 | 1.77e-14 | 74.3 |
MS.gene058285.t1 | AT4G26640 | 34.146 | 123 | 71 | 3 | 139 | 261 | 102 | 214 | 7.79e-12 | 66.2 |
MS.gene058285.t1 | AT1G69810 | 43.590 | 78 | 43 | 1 | 179 | 255 | 140 | 217 | 1.78e-14 | 73.6 |
MS.gene058285.t1 | AT1G69810 | 43.590 | 78 | 43 | 1 | 179 | 255 | 198 | 275 | 2.33e-14 | 73.6 |
MS.gene058285.t1 | AT2G37260 | 41.463 | 82 | 43 | 2 | 164 | 241 | 325 | 405 | 3.71e-14 | 73.2 |
MS.gene058285.t1 | AT2G37260 | 50.769 | 65 | 30 | 2 | 180 | 244 | 161 | 223 | 5.11e-12 | 66.6 |
MS.gene058285.t1 | AT3G01080 | 45.714 | 70 | 36 | 2 | 180 | 249 | 201 | 268 | 4.17e-14 | 72.4 |
MS.gene058285.t1 | AT1G13960 | 43.939 | 66 | 36 | 1 | 179 | 244 | 404 | 468 | 4.57e-14 | 73.2 |
MS.gene058285.t1 | AT1G13960 | 44.928 | 69 | 36 | 2 | 180 | 248 | 225 | 291 | 2.17e-12 | 68.2 |
MS.gene058285.t1 | AT2G03340 | 43.939 | 66 | 36 | 1 | 179 | 244 | 410 | 474 | 5.01e-14 | 73.2 |
MS.gene058285.t1 | AT2G03340 | 35.484 | 124 | 63 | 4 | 180 | 291 | 246 | 364 | 1.90e-12 | 68.2 |
MS.gene058285.t1 | AT2G37260 | 41.463 | 82 | 43 | 2 | 164 | 241 | 245 | 325 | 5.99e-14 | 72.0 |
MS.gene058285.t1 | AT2G37260 | 50.769 | 65 | 30 | 2 | 180 | 244 | 81 | 143 | 8.87e-12 | 65.5 |
MS.gene058285.t1 | AT2G37260 | 41.463 | 82 | 43 | 2 | 164 | 241 | 243 | 323 | 6.32e-14 | 72.0 |
MS.gene058285.t1 | AT2G37260 | 50.769 | 65 | 30 | 2 | 180 | 244 | 79 | 141 | 8.87e-12 | 65.5 |
MS.gene058285.t1 | AT2G38470 | 51.471 | 68 | 31 | 2 | 178 | 245 | 178 | 243 | 6.77e-14 | 72.8 |
MS.gene058285.t1 | AT2G38470 | 46.667 | 60 | 31 | 1 | 185 | 244 | 363 | 421 | 1.53e-13 | 71.6 |
MS.gene058285.t1 | AT1G13960 | 43.939 | 66 | 36 | 1 | 179 | 244 | 251 | 315 | 9.49e-14 | 71.6 |
MS.gene058285.t1 | AT1G13960 | 44.928 | 69 | 36 | 2 | 180 | 248 | 72 | 138 | 5.09e-12 | 66.6 |
MS.gene058285.t1 | AT4G04450 | 36.145 | 83 | 53 | 0 | 179 | 261 | 193 | 275 | 1.84e-13 | 71.2 |
MS.gene058285.t1 | AT5G26170 | 47.619 | 63 | 32 | 1 | 179 | 241 | 108 | 169 | 3.27e-13 | 67.4 |
MS.gene058285.t1 | AT4G04450 | 36.145 | 83 | 53 | 0 | 179 | 261 | 287 | 369 | 3.43e-13 | 70.5 |
MS.gene058285.t1 | AT4G22070 | 39.394 | 66 | 40 | 0 | 179 | 244 | 292 | 357 | 6.06e-13 | 69.7 |
MS.gene058285.t1 | AT4G22070 | 39.394 | 66 | 40 | 0 | 179 | 244 | 292 | 357 | 6.06e-13 | 69.7 |
MS.gene058285.t1 | AT4G22070 | 39.394 | 66 | 40 | 0 | 179 | 244 | 292 | 357 | 6.06e-13 | 69.7 |
MS.gene058285.t1 | AT4G22070 | 39.394 | 66 | 40 | 0 | 179 | 244 | 292 | 357 | 6.06e-13 | 69.7 |
MS.gene058285.t1 | AT2G30250 | 45.312 | 64 | 34 | 1 | 185 | 248 | 329 | 391 | 7.71e-13 | 68.9 |
MS.gene058285.t1 | AT1G80840 | 37.805 | 82 | 47 | 1 | 170 | 247 | 128 | 209 | 7.86e-13 | 68.6 |
MS.gene058285.t1 | AT4G26440 | 38.542 | 96 | 53 | 3 | 172 | 267 | 170 | 259 | 8.39e-13 | 69.3 |
MS.gene058285.t1 | AT2G47260 | 36.667 | 90 | 55 | 2 | 155 | 244 | 146 | 233 | 1.36e-12 | 68.2 |
MS.gene058285.t1 | AT1G62300 | 40.984 | 61 | 36 | 0 | 184 | 244 | 312 | 372 | 2.09e-12 | 68.2 |
MS.gene058285.t1 | AT5G43290 | 51.667 | 60 | 28 | 1 | 182 | 241 | 112 | 170 | 4.06e-12 | 65.9 |
MS.gene058285.t1 | AT1G69310 | 37.805 | 82 | 49 | 2 | 161 | 242 | 125 | 204 | 7.89e-12 | 65.5 |
MS.gene058285.t1 | AT1G69310 | 37.805 | 82 | 49 | 2 | 161 | 242 | 125 | 204 | 7.89e-12 | 65.5 |
MS.gene058285.t1 | AT1G69310 | 37.805 | 82 | 49 | 2 | 161 | 242 | 125 | 204 | 7.89e-12 | 65.5 |
MS.gene058285.t1 | AT1G55600 | 38.356 | 73 | 43 | 2 | 173 | 244 | 295 | 366 | 8.46e-12 | 66.2 |
MS.gene058285.t1 | AT4G18170 | 36.047 | 86 | 53 | 2 | 164 | 249 | 153 | 236 | 9.02e-12 | 65.5 |
MS.gene058285.t1 | AT5G56270 | 43.333 | 60 | 33 | 1 | 185 | 244 | 488 | 546 | 9.19e-12 | 66.2 |
MS.gene058285.t1 | AT5G56270 | 50.000 | 60 | 28 | 2 | 185 | 244 | 274 | 331 | 1.26e-11 | 65.9 |
MS.gene058285.t1 | AT4G31800 | 40.000 | 60 | 36 | 0 | 185 | 244 | 112 | 171 | 1.25e-11 | 64.3 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 397 | 519 | 1.30e-11 | 66.2 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.36e-11 | 66.2 |
MS.gene058285.t1 | AT1G29860 | 38.272 | 81 | 47 | 2 | 174 | 252 | 124 | 203 | 1.47e-11 | 64.3 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.55e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.60e-11 | 65.9 |
MS.gene058285.t1 | AT4G31800 | 40.000 | 60 | 36 | 0 | 185 | 244 | 177 | 236 | 1.61e-11 | 64.7 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.90e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.90e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.90e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.91e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.92e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.92e-11 | 65.9 |
MS.gene058285.t1 | AT4G12020 | 33.333 | 129 | 68 | 6 | 180 | 296 | 464 | 586 | 1.95e-11 | 65.5 |
MS.gene058285.t1 | AT1G18860 | 43.333 | 60 | 34 | 0 | 185 | 244 | 240 | 299 | 2.20e-11 | 65.1 |
MS.gene058285.t1 | AT3G62340 | 40.000 | 85 | 47 | 3 | 161 | 244 | 96 | 177 | 2.26e-11 | 63.9 |
MS.gene058285.t1 | AT5G49520 | 37.179 | 78 | 47 | 2 | 167 | 244 | 205 | 280 | 2.52e-11 | 64.7 |
MS.gene058285.t1 | AT5G15130 | 37.662 | 77 | 46 | 1 | 170 | 244 | 169 | 245 | 2.92e-11 | 64.7 |
MS.gene058285.t1 | AT5G15130 | 37.662 | 77 | 46 | 1 | 170 | 244 | 211 | 287 | 3.81e-11 | 64.3 |
MS.gene058285.t1 | AT5G41570 | 31.183 | 93 | 61 | 2 | 151 | 241 | 63 | 154 | 7.18e-11 | 60.8 |
Find 63 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTCTGAAACAGAATTTAT+TGG | 0.120089 | 2.2:+55603710 | MS.gene058285:CDS |
ATAACACACCAAGGACATTT+TGG | 0.248072 | 2.2:-55602356 | None:intergenic |
TAGAAACCCAAACTAGTTCT+AGG | 0.250090 | 2.2:+55602140 | MS.gene058285:CDS |
ACAAAGTTCTTAATTTCTTC+TGG | 0.267372 | 2.2:-55603596 | None:intergenic |
GTAAAACCCTAGAACTAGTT+TGG | 0.270284 | 2.2:-55602147 | None:intergenic |
AAGGTGGTGGTAGTGGTAAT+TGG | 0.290628 | 2.2:-55601830 | None:intergenic |
CTAGTTTGGGTTTCTAGAAT+TGG | 0.312695 | 2.2:-55602133 | None:intergenic |
CAAACCTCAGATCAAGAAAA+AGG | 0.317679 | 2.2:+55602191 | MS.gene058285:CDS |
AGGTGGTGGTAGTGGTAATT+GGG | 0.334105 | 2.2:-55601829 | None:intergenic |
GGTAATTGGGGTAATGATAG+TGG | 0.346701 | 2.2:-55601816 | None:intergenic |
GGGAATGTGAATAGCGGTGG+TGG | 0.376751 | 2.2:-55601771 | None:intergenic |
GCTTATATTGTGACGTATAA+AGG | 0.379319 | 2.2:+55603554 | MS.gene058285:CDS |
GATTGTTGCTGATTTGTGTT+TGG | 0.383802 | 2.2:-55602169 | None:intergenic |
TCTGACATAGCTGTTATGTT+TGG | 0.394725 | 2.2:-55603764 | None:intergenic |
TAAAACCCTAGAACTAGTTT+GGG | 0.406708 | 2.2:-55602146 | None:intergenic |
GAAATTAAGAACTTTGTTGT+TGG | 0.434538 | 2.2:+55603602 | MS.gene058285:CDS |
TATGTCAGAAGATTTATTGA+TGG | 0.435423 | 2.2:+55603778 | MS.gene058285:CDS |
ACTGACACTAGGATATTGAT+TGG | 0.442304 | 2.2:-55601948 | None:intergenic |
TGTGTATGTTGTGGACTAGA+TGG | 0.450832 | 2.2:-55602094 | None:intergenic |
GACTTTAACCACCTCAATAG+TGG | 0.457259 | 2.2:+55603800 | MS.gene058285:CDS |
GGAATGTGAATAGCGGTGGT+GGG | 0.459869 | 2.2:-55601770 | None:intergenic |
ACCTGAGAATTGCTAGTCTC+TGG | 0.471222 | 2.2:-55603662 | None:intergenic |
GAGCATAACATCTTCTACTT+CGG | 0.472162 | 2.2:-55601738 | None:intergenic |
GCCAGAGACTAGCAATTCTC+AGG | 0.477878 | 2.2:+55603661 | MS.gene058285:CDS |
TGTCCTTGGTGTGTTATATG+AGG | 0.480802 | 2.2:+55602362 | MS.gene058285:CDS |
AGCGGTTGTGATTTCAATGC+AGG | 0.486927 | 2.2:-55602047 | None:intergenic |
GTTAGCAAAGGTGGTGGTAG+TGG | 0.488522 | 2.2:-55601837 | None:intergenic |
TTGCTTCTTTGTGTATGTTG+TGG | 0.506190 | 2.2:-55602103 | None:intergenic |
AGAAACCCAAACTAGTTCTA+GGG | 0.507577 | 2.2:+55602141 | MS.gene058285:CDS |
AAAGAATGCCAAAATGTCCT+TGG | 0.516011 | 2.2:+55602348 | MS.gene058285:CDS |
GAATGTGAATAGCGGTGGTG+GGG | 0.524266 | 2.2:-55601769 | None:intergenic |
GGTAGGAGTAGTGGCAGTCA+AGG | 0.527115 | 2.2:-55601879 | None:intergenic |
CAAGGTGCTAATAGTGTTGG+CGG | 0.530004 | 2.2:-55601861 | None:intergenic |
GGAATAAAGCACCACTATTG+AGG | 0.537769 | 2.2:-55603811 | None:intergenic |
GTTGGCGGGGTTAGCAAAGG+TGG | 0.544813 | 2.2:-55601846 | None:intergenic |
GGTGGTGAGAGTAGTGATGG+TGG | 0.545701 | 2.2:-55601792 | None:intergenic |
GATAGTGTTGGCAGTAGAGA+TGG | 0.547801 | 2.2:-55601900 | None:intergenic |
GTAATTGGGGTAATGATAGT+GGG | 0.548235 | 2.2:-55601815 | None:intergenic |
AAGGTGCTAATAGTGTTGGC+GGG | 0.550983 | 2.2:-55601860 | None:intergenic |
AGTAGAGATGGTAGGAGTAG+TGG | 0.558152 | 2.2:-55601888 | None:intergenic |
TATGTTGTGGACTAGATGGA+TGG | 0.570891 | 2.2:-55602090 | None:intergenic |
TGAACTTTCAACAGACTCAT+GGG | 0.572196 | 2.2:+55602390 | MS.gene058285:CDS |
TTAAAGGGTCTCCACATCCA+AGG | 0.575832 | 2.2:+55602440 | MS.gene058285:CDS |
GTGGTGAGAGTAGTGATGGT+GGG | 0.578827 | 2.2:-55601791 | None:intergenic |
ATGTATGAAAACCTTGGATG+TGG | 0.583670 | 2.2:-55602451 | None:intergenic |
AGTCAAGGTGCTAATAGTGT+TGG | 0.585343 | 2.2:-55601864 | None:intergenic |
ATGAACTTTCAACAGACTCA+TGG | 0.586902 | 2.2:+55602389 | MS.gene058285:CDS |
GTGTTGGCAGTAGAGATGGT+AGG | 0.592781 | 2.2:-55601896 | None:intergenic |
GGCGGGGTTAGCAAAGGTGG+TGG | 0.593505 | 2.2:-55601843 | None:intergenic |
GGTGGGAATGTGAATAGCGG+TGG | 0.610840 | 2.2:-55601774 | None:intergenic |
TCATGGGCATGGAGTAAACA+TGG | 0.611520 | 2.2:+55602406 | MS.gene058285:CDS |
AGTGTTCGTCATGATAGTGT+TGG | 0.615034 | 2.2:-55601912 | None:intergenic |
AATTGGGGTAATGATAGTGG+GGG | 0.618091 | 2.2:-55601813 | None:intergenic |
TAATTGGGGTAATGATAGTG+GGG | 0.618793 | 2.2:-55601814 | None:intergenic |
TTTCAACAGACTCATGGGCA+TGG | 0.620196 | 2.2:+55602395 | MS.gene058285:CDS |
AGTGTTGGCGGGGTTAGCAA+AGG | 0.621663 | 2.2:-55601849 | None:intergenic |
GGTGGTGGTAGTGGTAATTG+GGG | 0.628613 | 2.2:-55601828 | None:intergenic |
TTCCCTCATATAACACACCA+AGG | 0.662868 | 2.2:-55602365 | None:intergenic |
GTCCTTGGTGTGTTATATGA+GGG | 0.664590 | 2.2:+55602363 | MS.gene058285:CDS |
ATAAAGCACCACTATTGAGG+TGG | 0.665488 | 2.2:-55603808 | None:intergenic |
AGGTGCTAATAGTGTTGGCG+GGG | 0.672241 | 2.2:-55601859 | None:intergenic |
GATGGTGGGAATGTGAATAG+CGG | 0.710352 | 2.2:-55601777 | None:intergenic |
GTATGCACGATCAAAATGAG+CGG | 0.723045 | 2.2:-55602065 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATAAAAAATATATAT+AGG | + | chr2.2:55602880-55602899 | MS.gene058285:intron | 0.0% |
!!! | TTTATTTTATTTTTTGTCTT+TGG | - | chr2.2:55602870-55602889 | None:intergenic | 10.0% |
!! | TAATATGAATAATATTTGCA+GGG | + | chr2.2:55602799-55602818 | MS.gene058285:intron | 15.0% |
!! | TTAATATGAATAATATTTGC+AGG | + | chr2.2:55602798-55602817 | MS.gene058285:intron | 15.0% |
!!! | AATAGAAAAAGTAATTTTAC+AGG | - | chr2.2:55602630-55602649 | None:intergenic | 15.0% |
!!! | ATAGAAAAAGTAATTTTACA+GGG | - | chr2.2:55602629-55602648 | None:intergenic | 15.0% |
!!! | ATTTTAATCCTTATTTTGAT+GGG | + | chr2.2:55602739-55602758 | MS.gene058285:intron | 15.0% |
!!! | CAATTTCAATATTTTTTCTT+AGG | - | chr2.2:55602704-55602723 | None:intergenic | 15.0% |
!! | AAAGTGAAAGATATAAACTT+AGG | - | chr2.2:55603007-55603026 | None:intergenic | 20.0% |
!! | ATGGACAAAAATTCATTAAA+GGG | + | chr2.2:55602425-55602444 | MS.gene058285:CDS | 20.0% |
!! | TATTAGTGCTCTTTATATAA+AGG | - | chr2.2:55603167-55603186 | None:intergenic | 20.0% |
!! | TGATAAACAAACAATTGATA+CGG | + | chr2.2:55603041-55603060 | MS.gene058285:intron | 20.0% |
!!! | CATTTTAATCCTTATTTTGA+TGG | + | chr2.2:55602738-55602757 | MS.gene058285:intron | 20.0% |
!!! | TTTATATAAAGGTATGCAAT+CGG | - | chr2.2:55603156-55603175 | None:intergenic | 20.0% |
!!! | TTTTTTCTGTAAGAAAAGAA+AGG | - | chr2.2:55602331-55602350 | None:intergenic | 20.0% |
! | ACAAAGTTCTTAATTTCTTC+TGG | - | chr2.2:55603599-55603618 | None:intergenic | 25.0% |
! | CATGGACAAAAATTCATTAA+AGG | + | chr2.2:55602424-55602443 | MS.gene058285:CDS | 25.0% |
! | GTAAGAAAAGAAAGGTAAAA+TGG | - | chr2.2:55602323-55602342 | None:intergenic | 25.0% |
! | TATGTCAGAAGATTTATTGA+TGG | + | chr2.2:55603778-55603797 | MS.gene058285:CDS | 25.0% |
! | TCTTTAACAGTAGGAAAATA+CGG | + | chr2.2:55603301-55603320 | MS.gene058285:intron | 25.0% |
! | TTAATCATTCTTTGCAATCT+TGG | - | chr2.2:55603265-55603284 | None:intergenic | 25.0% |
!! | AAATAGTGACAGTAAACTTT+TGG | + | chr2.2:55602551-55602570 | MS.gene058285:intron | 25.0% |
!! | GAAATCTATGAATGATTTGT+AGG | + | chr2.2:55603456-55603475 | MS.gene058285:intron | 25.0% |
!! | GAAATTAAGAACTTTGTTGT+TGG | + | chr2.2:55603602-55603621 | MS.gene058285:CDS | 25.0% |
!! | TGATTTGTATCTTTAACAGT+AGG | + | chr2.2:55603292-55603311 | MS.gene058285:intron | 25.0% |
!! | TTTTGAATGTATGAAAACCT+TGG | - | chr2.2:55602460-55602479 | None:intergenic | 25.0% |
!!! | AATTTTAGCCCATCAAAATA+AGG | - | chr2.2:55602750-55602769 | None:intergenic | 25.0% |
!!! | ACAAGAGATTTTTGATTCAT+CGG | - | chr2.2:55603693-55603712 | None:intergenic | 25.0% |
!!! | TCTTAATTTCTTCTGGTTTT+TGG | - | chr2.2:55603592-55603611 | None:intergenic | 25.0% |
!!! | TGTTCTGAAACAGAATTTAT+TGG | + | chr2.2:55603710-55603729 | MS.gene058285:CDS | 25.0% |
!!! | TTCTCTACATATTTTTTTGC+TGG | - | chr2.2:55603515-55603534 | None:intergenic | 25.0% |
ACACATATATATGCCATGAT+GGG | + | chr2.2:55602910-55602929 | MS.gene058285:intron | 30.0% | |
ATCCTTGCAATTTCAAAGAA+TGG | + | chr2.2:55602574-55602593 | MS.gene058285:intron | 30.0% | |
ATGATATTCTAACAACCTAC+AGG | - | chr2.2:55603336-55603355 | None:intergenic | 30.0% | |
GCTTATATTGTGACGTATAA+AGG | + | chr2.2:55603554-55603573 | MS.gene058285:CDS | 30.0% | |
TAAAAACCAAAAGCCAAAGA+TGG | + | chr2.2:55602837-55602856 | MS.gene058285:intron | 30.0% | |
TTGCTCAATGGAAAAAGATA+CGG | - | chr2.2:55603224-55603243 | None:intergenic | 30.0% | |
! | ACTATTTAAAACATGTGGTG+TGG | - | chr2.2:55602538-55602557 | None:intergenic | 30.0% |
! | ATTACCTTTTTCTTGATCTG+AGG | - | chr2.2:55602198-55602217 | None:intergenic | 30.0% |
! | CTATTTAAAACATGTGGTGT+GGG | - | chr2.2:55602537-55602556 | None:intergenic | 30.0% |
! | CTGTCACTATTTAAAACATG+TGG | - | chr2.2:55602543-55602562 | None:intergenic | 30.0% |
! | CTTTGGAAATAAACCATCTT+TGG | - | chr2.2:55602853-55602872 | None:intergenic | 30.0% |
! | CTTTTTCCATTGAGCAATTA+AGG | + | chr2.2:55603227-55603246 | MS.gene058285:intron | 30.0% |
! | GTTCGATGAGATTTAAGTTA+TGG | - | chr2.2:55602295-55602314 | None:intergenic | 30.0% |
! | TAAAACCCTAGAACTAGTTT+GGG | - | chr2.2:55602149-55602168 | None:intergenic | 30.0% |
!! | ATATGTTTTTGATCCCATCA+TGG | - | chr2.2:55602926-55602945 | None:intergenic | 30.0% |
!! | TACCATTCTTTGAAATTGCA+AGG | - | chr2.2:55602579-55602598 | None:intergenic | 30.0% |
!!! | AATAAACCATCTTTGGCTTT+TGG | - | chr2.2:55602846-55602865 | None:intergenic | 30.0% |
AAAGAATGCCAAAATGTCCT+TGG | + | chr2.2:55602348-55602367 | MS.gene058285:CDS | 35.0% | |
AAGAAATATGCCACTCATTG+TGG | + | chr2.2:55603123-55603142 | MS.gene058285:intron | 35.0% | |
AATGGAAAAAGATACGGTGT+GGG | - | chr2.2:55603218-55603237 | None:intergenic | 35.0% | |
ACTGACACTAGGATATTGAT+TGG | - | chr2.2:55601951-55601970 | None:intergenic | 35.0% | |
AGAAATATGCCACTCATTGT+GGG | + | chr2.2:55603124-55603143 | MS.gene058285:intron | 35.0% | |
AGGAACTATAACAAACACCA+GGG | - | chr2.2:55602684-55602703 | None:intergenic | 35.0% | |
ATGAACTTTCAACAGACTCA+TGG | + | chr2.2:55602389-55602408 | MS.gene058285:CDS | 35.0% | |
ATGTATGAAAACCTTGGATG+TGG | - | chr2.2:55602454-55602473 | None:intergenic | 35.0% | |
CAAACCTCAGATCAAGAAAA+AGG | + | chr2.2:55602191-55602210 | MS.gene058285:CDS | 35.0% | |
CACACATATATATGCCATGA+TGG | + | chr2.2:55602909-55602928 | MS.gene058285:intron | 35.0% | |
CATTGCAAATATTCCACCTT+TGG | + | chr2.2:55602650-55602669 | MS.gene058285:intron | 35.0% | |
GAGCATAACATCTTCTACTT+CGG | - | chr2.2:55601741-55601760 | None:intergenic | 35.0% | |
GTAAAACCCTAGAACTAGTT+TGG | - | chr2.2:55602150-55602169 | None:intergenic | 35.0% | |
GTAATTGGGGTAATGATAGT+GGG | - | chr2.2:55601818-55601837 | None:intergenic | 35.0% | |
GTTGAAAAATCACTGACACT+AGG | - | chr2.2:55601962-55601981 | None:intergenic | 35.0% | |
TAGGAACTATAACAAACACC+AGG | - | chr2.2:55602685-55602704 | None:intergenic | 35.0% | |
TCTGACATAGCTGTTATGTT+TGG | - | chr2.2:55603767-55603786 | None:intergenic | 35.0% | |
TCTTTGCAATCTTGGAAAGT+GGG | - | chr2.2:55603257-55603276 | None:intergenic | 35.0% | |
TGAACTTTCAACAGACTCAT+GGG | + | chr2.2:55602390-55602409 | MS.gene058285:CDS | 35.0% | |
TTCTTTGCAATCTTGGAAAG+TGG | - | chr2.2:55603258-55603277 | None:intergenic | 35.0% | |
TTGCTTCTTTGTGTATGTTG+TGG | - | chr2.2:55602106-55602125 | None:intergenic | 35.0% | |
! | ATAACACACCAAGGACATTT+TGG | - | chr2.2:55602359-55602378 | None:intergenic | 35.0% |
! | TAATTGGGGTAATGATAGTG+GGG | - | chr2.2:55601817-55601836 | None:intergenic | 35.0% |
! | TAGAAACCCAAACTAGTTCT+AGG | + | chr2.2:55602140-55602159 | MS.gene058285:CDS | 35.0% |
!! | AGAAACCCAAACTAGTTCTA+GGG | + | chr2.2:55602141-55602160 | MS.gene058285:CDS | 35.0% |
!! | CAGCATCATTTTGTTATGTG+AGG | - | chr2.2:55603630-55603649 | None:intergenic | 35.0% |
!! | CTAGTTTGGGTTTCTAGAAT+TGG | - | chr2.2:55602136-55602155 | None:intergenic | 35.0% |
!! | GATTGTTGCTGATTTGTGTT+TGG | - | chr2.2:55602172-55602191 | None:intergenic | 35.0% |
AACAGTAGGAAAATACGGTG+TGG | + | chr2.2:55603306-55603325 | MS.gene058285:intron | 40.0% | |
ATGGAAAAAGATACGGTGTG+GGG | - | chr2.2:55603217-55603236 | None:intergenic | 40.0% | |
CAATGGAAAAAGATACGGTG+TGG | - | chr2.2:55603219-55603238 | None:intergenic | 40.0% | |
GACTTTAACCACCTCAATAG+TGG | + | chr2.2:55603800-55603819 | MS.gene058285:CDS | 40.0% | |
GGTAATTGGGGTAATGATAG+TGG | - | chr2.2:55601819-55601838 | None:intergenic | 40.0% | |
GTATGCACGATCAAAATGAG+CGG | - | chr2.2:55602068-55602087 | None:intergenic | 40.0% | |
TTCCATTGAGCAATTAAGGC+TGG | + | chr2.2:55603231-55603250 | MS.gene058285:intron | 40.0% | |
TTCCCTCATATAACACACCA+AGG | - | chr2.2:55602368-55602387 | None:intergenic | 40.0% | |
! | AGTCAAGGTGCTAATAGTGT+TGG | - | chr2.2:55601867-55601886 | None:intergenic | 40.0% |
! | AGTGTTCGTCATGATAGTGT+TGG | - | chr2.2:55601915-55601934 | None:intergenic | 40.0% |
! | ATAAAGCACCACTATTGAGG+TGG | - | chr2.2:55603811-55603830 | None:intergenic | 40.0% |
! | GGAATAAAGCACCACTATTG+AGG | - | chr2.2:55603814-55603833 | None:intergenic | 40.0% |
! | GTCCTTGGTGTGTTATATGA+GGG | + | chr2.2:55602363-55602382 | MS.gene058285:CDS | 40.0% |
! | TGTCCTTGGTGTGTTATATG+AGG | + | chr2.2:55602362-55602381 | MS.gene058285:CDS | 40.0% |
!! | AATTGGGGTAATGATAGTGG+GGG | - | chr2.2:55601816-55601835 | None:intergenic | 40.0% |
!! | TATGTTGTGGACTAGATGGA+TGG | - | chr2.2:55602093-55602112 | None:intergenic | 40.0% |
!! | TGTGTATGTTGTGGACTAGA+TGG | - | chr2.2:55602097-55602116 | None:intergenic | 40.0% |
!!! | TGGGGAAAGTTGTTGGTTTT+TGG | - | chr2.2:55603199-55603218 | None:intergenic | 40.0% |
AGCGGTTGTGATTTCAATGC+AGG | - | chr2.2:55602050-55602069 | None:intergenic | 45.0% | |
AGTAGAGATGGTAGGAGTAG+TGG | - | chr2.2:55601891-55601910 | None:intergenic | 45.0% | |
ATATGCCACTCATTGTGGGA+CGG | + | chr2.2:55603128-55603147 | MS.gene058285:intron | 45.0% | |
CACCAGGGACAAAAAACCAA+AGG | - | chr2.2:55602669-55602688 | None:intergenic | 45.0% | |
CAGGGACAAAAAACCAAAGG+TGG | - | chr2.2:55602666-55602685 | None:intergenic | 45.0% | |
TCATGGGCATGGAGTAAACA+TGG | + | chr2.2:55602406-55602425 | MS.gene058285:CDS | 45.0% | |
TTAAAGGGTCTCCACATCCA+AGG | + | chr2.2:55602440-55602459 | MS.gene058285:CDS | 45.0% | |
TTTCAACAGACTCATGGGCA+TGG | + | chr2.2:55602395-55602414 | MS.gene058285:CDS | 45.0% | |
! | ACCTGAGAATTGCTAGTCTC+TGG | - | chr2.2:55603665-55603684 | None:intergenic | 45.0% |
! | CAAGGTGCTAATAGTGTTGG+CGG | - | chr2.2:55601864-55601883 | None:intergenic | 45.0% |
!! | AAGGTGCTAATAGTGTTGGC+GGG | - | chr2.2:55601863-55601882 | None:intergenic | 45.0% |
!! | AAGGTGGTGGTAGTGGTAAT+TGG | - | chr2.2:55601833-55601852 | None:intergenic | 45.0% |
!! | AGGTGGTGGTAGTGGTAATT+GGG | - | chr2.2:55601832-55601851 | None:intergenic | 45.0% |
!! | GATAGTGTTGGCAGTAGAGA+TGG | - | chr2.2:55601903-55601922 | None:intergenic | 45.0% |
!! | GATGGTGGGAATGTGAATAG+CGG | - | chr2.2:55601780-55601799 | None:intergenic | 45.0% |
!!! | CACCTTTGGTTTTTTGTCCC+TGG | + | chr2.2:55602664-55602683 | MS.gene058285:intron | 45.0% |
!! | AATATTATTCATATTAAAAT+TGG | - | chr2.2:55602795-55602814 | None:intergenic | 5.0% |
ATACGGTGTGGACAACCTGT+AGG | + | chr2.2:55603318-55603337 | MS.gene058285:intron | 50.0% | |
GAATGTGAATAGCGGTGGTG+GGG | - | chr2.2:55601772-55601791 | None:intergenic | 50.0% | |
GCCAGAGACTAGCAATTCTC+AGG | + | chr2.2:55603661-55603680 | MS.gene058285:CDS | 50.0% | |
GGAATGTGAATAGCGGTGGT+GGG | - | chr2.2:55601773-55601792 | None:intergenic | 50.0% | |
GGCCAGCCTTAATTGCTCAA+TGG | - | chr2.2:55603236-55603255 | None:intergenic | 50.0% | |
GTGGTGAGAGTAGTGATGGT+GGG | - | chr2.2:55601794-55601813 | None:intergenic | 50.0% | |
GTGGTGTGGGTGTGTGTATT+AGG | - | chr2.2:55602524-55602543 | None:intergenic | 50.0% | |
TACGGTGTGGGGAAAGTTGT+TGG | - | chr2.2:55603206-55603225 | None:intergenic | 50.0% | |
! | GTGTTGGCAGTAGAGATGGT+AGG | - | chr2.2:55601899-55601918 | None:intergenic | 50.0% |
! | GTTAGCAAAGGTGGTGGTAG+TGG | - | chr2.2:55601840-55601859 | None:intergenic | 50.0% |
!! | AGGTGCTAATAGTGTTGGCG+GGG | - | chr2.2:55601862-55601881 | None:intergenic | 50.0% |
!! | GGTGGTGGTAGTGGTAATTG+GGG | - | chr2.2:55601831-55601850 | None:intergenic | 50.0% |
GGGAATGTGAATAGCGGTGG+TGG | - | chr2.2:55601774-55601793 | None:intergenic | 55.0% | |
GGTAGGAGTAGTGGCAGTCA+AGG | - | chr2.2:55601882-55601901 | None:intergenic | 55.0% | |
GGTGGGAATGTGAATAGCGG+TGG | - | chr2.2:55601777-55601796 | None:intergenic | 55.0% | |
GGTGGTGAGAGTAGTGATGG+TGG | - | chr2.2:55601795-55601814 | None:intergenic | 55.0% | |
GTAATGTGTGCGCGCGCAAA+TGG | + | chr2.2:55603389-55603408 | MS.gene058285:intron | 55.0% | |
!! | AGTGTTGGCGGGGTTAGCAA+AGG | - | chr2.2:55601852-55601871 | None:intergenic | 55.0% |
!! | TGGGGTAATGATAGTGGGGG+TGG | - | chr2.2:55601813-55601832 | None:intergenic | 55.0% |
CGGTTCCGTCCCACAATGAG+TGG | - | chr2.2:55603136-55603155 | None:intergenic | 60.0% | |
GGGGGTGGTGAGAGTAGTGA+TGG | - | chr2.2:55601798-55601817 | None:intergenic | 60.0% | |
! | GTTGGCGGGGTTAGCAAAGG+TGG | - | chr2.2:55601849-55601868 | None:intergenic | 60.0% |
! | GGCGGGGTTAGCAAAGGTGG+TGG | - | chr2.2:55601846-55601865 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 55601719 | 55603838 | 55601719 | ID=MS.gene058285 |
chr2.2 | mRNA | 55601719 | 55603838 | 55601719 | ID=MS.gene058285.t1;Parent=MS.gene058285 |
chr2.2 | exon | 55601719 | 55602212 | 55601719 | ID=MS.gene058285.t1.exon1;Parent=MS.gene058285.t1 |
chr2.2 | CDS | 55601719 | 55602212 | 55601719 | ID=cds.MS.gene058285.t1;Parent=MS.gene058285.t1 |
chr2.2 | exon | 55602345 | 55602461 | 55602345 | ID=MS.gene058285.t1.exon2;Parent=MS.gene058285.t1 |
chr2.2 | CDS | 55602345 | 55602461 | 55602345 | ID=cds.MS.gene058285.t1;Parent=MS.gene058285.t1 |
chr2.2 | exon | 55603478 | 55603838 | 55603478 | ID=MS.gene058285.t1.exon3;Parent=MS.gene058285.t1 |
chr2.2 | CDS | 55603478 | 55603838 | 55603478 | ID=cds.MS.gene058285.t1;Parent=MS.gene058285.t1 |
Gene Sequence |
Protein sequence |