Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058762.t1 | XP_003598025.2 | 81 | 525 | 96 | 3 | 1 | 523 | 20 | 542 | 2.90E-241 | 844.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058762.t1 | Q8L3W1 | 28.8 | 340 | 151 | 8 | 270 | 522 | 6 | 341 | 9.2e-26 | 119.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058762.t1 | G7IYE4 | 81.0 | 525 | 96 | 3 | 1 | 523 | 20 | 542 | 2.1e-241 | 844.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene058762.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058762.t1 | MTR_3g005420 | 80.952 | 525 | 96 | 3 | 1 | 523 | 20 | 542 | 0.0 | 848 |
MS.gene058762.t1 | MTR_3g005420 | 52.518 | 278 | 106 | 4 | 239 | 514 | 11 | 264 | 6.98e-82 | 265 |
MS.gene058762.t1 | MTR_3g005420 | 75.048 | 525 | 92 | 4 | 1 | 523 | 1 | 488 | 0.0 | 767 |
MS.gene058762.t1 | MTR_3g005460 | 71.107 | 533 | 134 | 4 | 1 | 523 | 1 | 523 | 0.0 | 741 |
MS.gene058762.t1 | MTR_3g005495 | 66.875 | 480 | 123 | 7 | 38 | 515 | 28 | 473 | 0.0 | 619 |
MS.gene058762.t1 | MTR_3g005495 | 48.750 | 240 | 104 | 6 | 18 | 244 | 238 | 471 | 7.81e-61 | 207 |
MS.gene058762.t1 | MTR_3g005440 | 64.598 | 435 | 118 | 4 | 37 | 469 | 34 | 434 | 0.0 | 533 |
MS.gene058762.t1 | MTR_3g005440 | 49.356 | 233 | 67 | 4 | 284 | 514 | 34 | 217 | 2.96e-57 | 197 |
MS.gene058762.t1 | MTR_3g005440 | 48.325 | 209 | 80 | 2 | 18 | 204 | 237 | 439 | 2.47e-54 | 189 |
MS.gene058762.t1 | MTR_5g070440 | 67.153 | 274 | 88 | 1 | 250 | 523 | 3 | 274 | 1.07e-127 | 374 |
MS.gene058762.t1 | MTR_5g070440 | 57.463 | 268 | 88 | 4 | 1 | 245 | 1 | 265 | 2.95e-93 | 285 |
MS.gene058762.t1 | MTR_3g005490 | 68.846 | 260 | 70 | 2 | 265 | 523 | 16 | 265 | 1.53e-125 | 368 |
MS.gene058762.t1 | MTR_3g005490 | 58.301 | 259 | 91 | 5 | 1 | 245 | 1 | 256 | 9.41e-90 | 276 |
MS.gene058762.t1 | MTR_3g005480 | 68.340 | 259 | 70 | 2 | 265 | 521 | 16 | 264 | 5.30e-122 | 358 |
MS.gene058762.t1 | MTR_3g005480 | 55.000 | 260 | 99 | 5 | 1 | 245 | 1 | 257 | 5.09e-82 | 256 |
MS.gene058762.t1 | MTR_1g015350 | 36.667 | 210 | 39 | 5 | 313 | 522 | 58 | 173 | 3.36e-27 | 108 |
MS.gene058762.t1 | MTR_1g015350 | 31.441 | 229 | 100 | 5 | 1 | 229 | 1 | 172 | 6.80e-19 | 84.7 |
MS.gene058762.t1 | MTR_3g061350 | 30.325 | 277 | 159 | 8 | 270 | 516 | 12 | 284 | 7.08e-26 | 107 |
MS.gene058762.t1 | MTR_3g061350 | 35.398 | 113 | 71 | 1 | 23 | 135 | 12 | 122 | 2.51e-16 | 79.7 |
MS.gene058762.t1 | MTR_1g034240 | 43.636 | 110 | 62 | 0 | 270 | 379 | 7 | 116 | 1.49e-25 | 109 |
MS.gene058762.t1 | MTR_1g034240 | 43.119 | 109 | 61 | 1 | 23 | 130 | 7 | 115 | 1.35e-23 | 103 |
MS.gene058762.t1 | MTR_1g034240 | 34.615 | 130 | 74 | 4 | 396 | 518 | 268 | 393 | 1.80e-13 | 72.8 |
MS.gene058762.t1 | MTR_7g050560 | 27.586 | 290 | 164 | 6 | 269 | 520 | 12 | 293 | 5.13e-25 | 105 |
MS.gene058762.t1 | MTR_7g050560 | 34.951 | 103 | 67 | 0 | 22 | 124 | 12 | 114 | 7.81e-18 | 84.7 |
MS.gene058762.t1 | MTR_8g103940 | 26.821 | 302 | 158 | 7 | 270 | 517 | 39 | 331 | 1.29e-24 | 107 |
MS.gene058762.t1 | MTR_8g103940 | 27.679 | 112 | 81 | 0 | 23 | 134 | 39 | 150 | 2.57e-12 | 69.3 |
MS.gene058762.t1 | MTR_3g061370 | 29.371 | 286 | 156 | 9 | 267 | 516 | 6 | 281 | 1.39e-24 | 103 |
MS.gene058762.t1 | MTR_3g061370 | 26.007 | 273 | 149 | 6 | 19 | 240 | 5 | 275 | 4.58e-16 | 79.0 |
MS.gene058762.t1 | MTR_7g050710 | 27.184 | 309 | 172 | 10 | 263 | 520 | 4 | 310 | 5.22e-24 | 103 |
MS.gene058762.t1 | MTR_7g050710 | 31.897 | 116 | 75 | 1 | 22 | 133 | 12 | 127 | 3.21e-15 | 77.0 |
MS.gene058762.t1 | MTR_3g061310 | 28.417 | 278 | 164 | 5 | 270 | 516 | 12 | 285 | 5.75e-24 | 102 |
MS.gene058762.t1 | MTR_3g061310 | 41.414 | 99 | 56 | 1 | 23 | 121 | 12 | 108 | 3.62e-18 | 85.5 |
MS.gene058762.t1 | MTR_5g044670 | 24.080 | 299 | 185 | 7 | 263 | 520 | 9 | 306 | 1.19e-23 | 102 |
MS.gene058762.t1 | MTR_5g044670 | 33.846 | 130 | 84 | 2 | 23 | 151 | 16 | 144 | 6.50e-16 | 79.3 |
MS.gene058762.t1 | MTR_3g098790 | 27.491 | 291 | 172 | 6 | 269 | 520 | 12 | 302 | 3.72e-23 | 100 |
MS.gene058762.t1 | MTR_3g098790 | 26.408 | 284 | 141 | 8 | 16 | 234 | 6 | 286 | 3.90e-19 | 89.0 |
MS.gene058762.t1 | MTR_4g068320 | 41.176 | 102 | 60 | 0 | 267 | 368 | 3 | 104 | 3.95e-21 | 96.3 |
MS.gene058762.t1 | MTR_4g068320 | 36.364 | 110 | 70 | 0 | 20 | 129 | 3 | 112 | 1.50e-18 | 88.6 |
MS.gene058762.t1 | MTR_4g068320 | 30.000 | 190 | 103 | 6 | 353 | 520 | 210 | 391 | 1.88e-13 | 72.8 |
MS.gene058762.t1 | MTR_1g108780 | 25.694 | 288 | 152 | 10 | 285 | 518 | 12 | 291 | 6.88e-21 | 95.9 |
MS.gene058762.t1 | MTR_7g050580 | 26.117 | 291 | 167 | 7 | 269 | 520 | 12 | 293 | 1.09e-20 | 93.2 |
MS.gene058762.t1 | MTR_7g050580 | 32.432 | 111 | 75 | 0 | 12 | 122 | 2 | 112 | 7.43e-17 | 82.0 |
MS.gene058762.t1 | MTR_3g061320 | 29.137 | 278 | 158 | 8 | 269 | 516 | 11 | 279 | 1.35e-20 | 92.4 |
MS.gene058762.t1 | MTR_3g061320 | 40.000 | 100 | 58 | 1 | 22 | 121 | 11 | 108 | 1.46e-16 | 80.5 |
MS.gene058762.t1 | MTR_1g035460 | 27.703 | 296 | 140 | 10 | 286 | 517 | 2 | 287 | 1.36e-20 | 94.4 |
MS.gene058762.t1 | MTR_1g035460 | 33.721 | 86 | 57 | 0 | 39 | 124 | 2 | 87 | 4.12e-12 | 68.6 |
MS.gene058762.t1 | MTR_1g034210 | 40.909 | 110 | 63 | 1 | 270 | 379 | 7 | 114 | 1.67e-20 | 92.8 |
MS.gene058762.t1 | MTR_1g034210 | 38.462 | 104 | 64 | 0 | 23 | 126 | 7 | 110 | 1.31e-18 | 87.4 |
MS.gene058762.t1 | MTR_3g061340 | 29.520 | 271 | 159 | 9 | 270 | 516 | 12 | 274 | 2.71e-20 | 91.3 |
MS.gene058762.t1 | MTR_3g061340 | 40.000 | 100 | 57 | 2 | 23 | 121 | 12 | 109 | 9.83e-13 | 68.9 |
MS.gene058762.t1 | MTR_1g034210 | 40.909 | 110 | 63 | 1 | 270 | 379 | 7 | 114 | 3.35e-20 | 92.8 |
MS.gene058762.t1 | MTR_1g034210 | 38.462 | 104 | 64 | 0 | 23 | 126 | 7 | 110 | 2.81e-18 | 87.0 |
MS.gene058762.t1 | MTR_1g034210 | 37.398 | 123 | 62 | 6 | 404 | 517 | 242 | 358 | 2.96e-12 | 68.6 |
MS.gene058762.t1 | MTR_7g050720 | 26.537 | 309 | 165 | 8 | 269 | 517 | 9 | 315 | 1.25e-18 | 87.4 |
MS.gene058762.t1 | MTR_7g050720 | 32.331 | 133 | 88 | 1 | 22 | 154 | 9 | 139 | 1.28e-16 | 81.3 |
MS.gene058762.t1 | MTR_0152s0100 | 40.367 | 109 | 64 | 1 | 413 | 521 | 5 | 112 | 1.37e-17 | 79.0 |
MS.gene058762.t1 | MTR_0152s0100 | 40.367 | 109 | 64 | 1 | 413 | 521 | 5 | 112 | 1.37e-17 | 79.0 |
MS.gene058762.t1 | MTR_3g061290 | 33.333 | 183 | 106 | 5 | 22 | 193 | 11 | 188 | 2.30e-17 | 81.3 |
MS.gene058762.t1 | MTR_3g061290 | 38.793 | 116 | 67 | 2 | 269 | 384 | 11 | 122 | 3.92e-16 | 77.4 |
MS.gene058762.t1 | MTR_3g061330 | 32.020 | 203 | 107 | 5 | 270 | 443 | 12 | 212 | 1.19e-16 | 80.1 |
MS.gene058762.t1 | MTR_3g061330 | 39.394 | 99 | 58 | 1 | 23 | 121 | 12 | 108 | 6.50e-15 | 75.1 |
MS.gene058762.t1 | MTR_7g050590 | 26.552 | 290 | 150 | 9 | 286 | 520 | 2 | 283 | 1.23e-16 | 80.9 |
MS.gene058762.t1 | MTR_7g050590 | 32.673 | 101 | 62 | 1 | 39 | 133 | 2 | 102 | 4.22e-14 | 73.6 |
MS.gene058762.t1 | MTR_3g061220 | 40.404 | 99 | 44 | 2 | 23 | 121 | 12 | 95 | 1.38e-15 | 73.6 |
MS.gene058762.t1 | MTR_3g061220 | 39.394 | 99 | 45 | 2 | 270 | 368 | 12 | 95 | 4.31e-14 | 69.3 |
MS.gene058762.t1 | MTR_6g043890 | 23.944 | 284 | 169 | 7 | 269 | 507 | 14 | 295 | 9.21e-15 | 75.9 |
MS.gene058762.t1 | MTR_6g061070 | 25.240 | 313 | 165 | 9 | 269 | 518 | 17 | 323 | 9.62e-15 | 77.0 |
MS.gene058762.t1 | MTR_4g119990 | 23.856 | 306 | 167 | 9 | 269 | 516 | 14 | 311 | 2.02e-14 | 75.5 |
MS.gene058762.t1 | MTR_1g035640 | 24.460 | 278 | 164 | 8 | 279 | 519 | 14 | 282 | 3.30e-14 | 75.5 |
MS.gene058762.t1 | MTR_1g035480 | 31.008 | 129 | 76 | 3 | 264 | 392 | 11 | 126 | 1.81e-13 | 69.3 |
MS.gene058762.t1 | MTR_1g050845 | 26.471 | 272 | 175 | 7 | 268 | 521 | 7 | 271 | 2.32e-13 | 73.2 |
MS.gene058762.t1 | MTR_1g035500 | 30.233 | 129 | 84 | 3 | 269 | 397 | 24 | 146 | 1.94e-12 | 66.2 |
MS.gene058762.t1 | MTR_1g033740 | 31.967 | 122 | 78 | 3 | 269 | 390 | 21 | 137 | 2.66e-12 | 66.2 |
MS.gene058762.t1 | MTR_1g033740 | 29.600 | 125 | 83 | 3 | 22 | 146 | 21 | 140 | 6.02e-12 | 65.1 |
MS.gene058762.t1 | MTR_7g050640 | 34.286 | 105 | 69 | 0 | 269 | 373 | 12 | 116 | 1.02e-11 | 62.4 |
MS.gene058762.t1 | MTR_7g050640 | 29.630 | 108 | 76 | 0 | 16 | 123 | 6 | 113 | 1.95e-11 | 61.6 |
MS.gene058762.t1 | MTR_1g035440 | 33.654 | 104 | 68 | 1 | 269 | 371 | 14 | 117 | 2.25e-11 | 64.7 |
MS.gene058762.t1 | MTR_1g035620 | 24.460 | 278 | 181 | 9 | 270 | 521 | 9 | 283 | 4.64e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058762.t1 | AT3G18990 | 45.455 | 99 | 54 | 0 | 270 | 368 | 6 | 104 | 1.45e-22 | 99.4 |
MS.gene058762.t1 | AT3G18990 | 39.394 | 99 | 60 | 0 | 23 | 121 | 6 | 104 | 1.18e-19 | 90.9 |
MS.gene058762.t1 | AT3G18990 | 32.867 | 143 | 84 | 5 | 386 | 522 | 205 | 341 | 3.91e-11 | 65.1 |
MS.gene058762.t1 | AT3G18990 | 45.455 | 99 | 54 | 0 | 270 | 368 | 6 | 104 | 2.73e-22 | 99.0 |
MS.gene058762.t1 | AT3G18990 | 39.394 | 99 | 60 | 0 | 23 | 121 | 6 | 104 | 1.85e-19 | 90.5 |
MS.gene058762.t1 | AT3G18990 | 33.333 | 144 | 84 | 5 | 386 | 523 | 205 | 342 | 2.12e-11 | 66.2 |
MS.gene058762.t1 | AT4G01580 | 37.879 | 132 | 79 | 1 | 239 | 370 | 2 | 130 | 1.49e-20 | 90.1 |
MS.gene058762.t1 | AT4G01580 | 36.111 | 108 | 69 | 0 | 16 | 123 | 23 | 130 | 5.53e-18 | 82.4 |
MS.gene058762.t1 | AT3G18960 | 37.879 | 132 | 79 | 1 | 239 | 370 | 2 | 130 | 7.90e-20 | 88.2 |
MS.gene058762.t1 | AT3G18960 | 36.111 | 108 | 69 | 0 | 16 | 123 | 23 | 130 | 7.99e-18 | 82.4 |
MS.gene058762.t1 | AT3G18960 | 37.879 | 132 | 79 | 1 | 239 | 370 | 2 | 130 | 1.13e-19 | 87.8 |
MS.gene058762.t1 | AT3G18960 | 36.111 | 108 | 69 | 0 | 16 | 123 | 23 | 130 | 1.61e-17 | 81.6 |
MS.gene058762.t1 | AT1G49475 | 40.187 | 107 | 63 | 1 | 268 | 374 | 32 | 137 | 7.60e-18 | 82.0 |
MS.gene058762.t1 | AT1G49475 | 35.252 | 139 | 81 | 2 | 1 | 131 | 4 | 141 | 9.95e-18 | 82.0 |
MS.gene058762.t1 | AT3G18960 | 40.909 | 88 | 52 | 0 | 283 | 370 | 6 | 93 | 8.46e-15 | 72.8 |
MS.gene058762.t1 | AT3G18960 | 36.364 | 88 | 56 | 0 | 36 | 123 | 6 | 93 | 1.29e-13 | 69.3 |
MS.gene058762.t1 | AT1G26680 | 22.482 | 556 | 332 | 25 | 22 | 515 | 14 | 532 | 1.20e-13 | 74.3 |
MS.gene058762.t1 | AT1G26680 | 22.482 | 556 | 332 | 25 | 22 | 515 | 14 | 532 | 1.61e-13 | 73.9 |
MS.gene058762.t1 | AT1G49480 | 33.835 | 133 | 78 | 4 | 396 | 522 | 98 | 226 | 1.48e-12 | 67.8 |
MS.gene058762.t1 | AT1G49480 | 33.835 | 133 | 78 | 4 | 396 | 522 | 98 | 226 | 1.48e-12 | 67.8 |
MS.gene058762.t1 | AT1G49480 | 33.835 | 133 | 78 | 4 | 396 | 522 | 98 | 226 | 1.48e-12 | 67.8 |
MS.gene058762.t1 | AT1G26680 | 21.517 | 567 | 335 | 26 | 22 | 515 | 14 | 543 | 3.89e-11 | 66.2 |
MS.gene058762.t1 | AT1G26680 | 23.288 | 365 | 229 | 17 | 22 | 357 | 14 | 356 | 3.91e-11 | 66.2 |
MS.gene058762.t1 | AT1G26680 | 23.288 | 365 | 229 | 17 | 22 | 357 | 14 | 356 | 4.04e-11 | 66.2 |
Find 107 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGCTTTCCTTGATAATTT+TGG | 0.125823 | 3.1:+702073 | None:intergenic |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3.1:-702467 | MS.gene058762:CDS |
AATGAAACATACTATTTCTT+TGG | 0.239006 | 3.1:+702934 | None:intergenic |
GATGAGTTTATAACAAGATT+TGG | 0.242784 | 3.1:-701227 | MS.gene058762:CDS |
TTCAAAACTTCAAGTGTTAC+TGG | 0.260689 | 3.1:-700981 | MS.gene058762:CDS |
GGAAAGCAGTGGGAAGTTTC+TGG | 0.267335 | 3.1:-702060 | MS.gene058762:CDS |
AAATACTATTCGTTAGGATA+TGG | 0.294914 | 3.1:-701089 | MS.gene058762:CDS |
CTCCATTAGTCCTCCGAGTT+TGG | 0.310150 | 3.1:+702357 | None:intergenic |
TACTATCTCTTTGTCATGAA+TGG | 0.314672 | 3.1:+701676 | None:intergenic |
GGCAGCATCCTTTGATCTTT+CGG | 0.316735 | 3.1:+702304 | None:intergenic |
AAGTGAGTGTCATGGGAAAA+AGG | 0.323227 | 3.1:-700907 | MS.gene058762:CDS |
GACGATGATCCGACGGTATT+CGG | 0.325749 | 3.1:+700595 | None:intergenic |
TATGGCTTTCATAAAATGTT+TGG | 0.328767 | 3.1:+702976 | None:intergenic |
TATGGCCTTCTTGAAATGTT+TGG | 0.331141 | 3.1:+701709 | None:intergenic |
ACGAGTGGATTCTATAGATT+TGG | 0.332725 | 3.1:-702000 | MS.gene058762:CDS |
TGGAGCTTTGTAGGAACATT+TGG | 0.337830 | 3.1:+700655 | None:intergenic |
TCCCTTTGTATTTGAAAGAT+AGG | 0.356495 | 3.1:+701060 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3.1:-702141 | MS.gene058762:intron |
GGACTAGCACACTTTGTGTT+TGG | 0.364884 | 3.1:+700954 | None:intergenic |
ACTATTTCTTTGGTGTGATC+TGG | 0.366153 | 3.1:+702944 | None:intergenic |
ATGAGTTTATAACAAGATTT+GGG | 0.367534 | 3.1:-701226 | MS.gene058762:CDS |
TGCATAGCAGCCAAAGGCTT+TGG | 0.374814 | 3.1:+702247 | None:intergenic |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3.1:+701691 | None:intergenic |
TGGAGCATGAACGGAACATT+TGG | 0.383147 | 3.1:+702093 | None:intergenic |
AGCATGTTTAGACACGCTTT+TGG | 0.391587 | 3.1:+700884 | None:intergenic |
TGATGGTCGTGAATGGGAAT+TGG | 0.392554 | 3.1:-702546 | MS.gene058762:CDS |
GAGCTCAGACAGTTTATGTT+TGG | 0.396072 | 3.1:+702332 | None:intergenic |
GTGGGAAGTTTCTGGTGTAT+TGG | 0.397299 | 3.1:-702052 | MS.gene058762:CDS |
AATCTTGTTATAAACTCATC+TGG | 0.413404 | 3.1:+701230 | None:intergenic |
TTCCAAACTCGGAGGACTAA+TGG | 0.416125 | 3.1:-702359 | MS.gene058762:CDS |
TTTGCAAAATACTATTCGTT+AGG | 0.426106 | 3.1:-701095 | MS.gene058762:CDS |
AATGACAGAAAAGGAAGTTA+AGG | 0.431194 | 3.1:-701735 | MS.gene058762:CDS |
CAGTTCCTGATGGTCGTGAT+TGG | 0.434376 | 3.1:-701175 | MS.gene058762:CDS |
TTGGAGTCTTTCTCCGGTGC+CGG | 0.438643 | 3.1:+702995 | None:intergenic |
TATTGCAATGCAGCCTCCAC+AGG | 0.439091 | 3.1:-701774 | MS.gene058762:intron |
TTCTTTGGTGTGATCTGGAG+GGG | 0.446677 | 3.1:+702949 | None:intergenic |
ACTATCTCTTTGTCATGAAT+GGG | 0.448674 | 3.1:+701677 | None:intergenic |
TATTTAGATTTCAAATATGA+AGG | 0.449992 | 3.1:-702440 | MS.gene058762:CDS |
ATTGTGACTTCTAGCACAAC+CGG | 0.451587 | 3.1:+700481 | None:intergenic |
ACACTCACTTGTTTCAACCT+TGG | 0.458460 | 3.1:+700920 | None:intergenic |
ACCTATCTTTCAAATACAAA+GGG | 0.468933 | 3.1:-701061 | MS.gene058762:CDS |
AAATGTTTGGAGTCTTTCTC+CGG | 0.471746 | 3.1:+702989 | None:intergenic |
TCTTTCTCCGGTGCCGGTGA+CGG | 0.475517 | 3.1:+703001 | None:intergenic |
ATTTCTTTGGTGTGATCTGG+AGG | 0.477704 | 3.1:+702947 | None:intergenic |
TTTCTTATCCATTCCAAACT+CGG | 0.478870 | 3.1:-702370 | MS.gene058762:CDS |
CTCTTTGTCATGAATGGGCG+AGG | 0.492559 | 3.1:+701682 | None:intergenic |
GATGGTCGTGAATGGGAATT+GGG | 0.494055 | 3.1:-702545 | MS.gene058762:CDS |
AATTCCCATTCACGACCATC+AGG | 0.496167 | 3.1:+702548 | None:intergenic |
GTAACTTGTAACACCACAAC+AGG | 0.496207 | 3.1:+701919 | None:intergenic |
ACACAAAGTGTGCTAGTCCT+AGG | 0.498715 | 3.1:-700950 | MS.gene058762:CDS |
TTTCTTTGGTGTGATCTGGA+GGG | 0.501002 | 3.1:+702948 | None:intergenic |
TCCGGTGCCGGTGACGGTGT+CGG | 0.503622 | 3.1:+703007 | None:intergenic |
TACCTATCTTTCAAATACAA+AGG | 0.508968 | 3.1:-701062 | MS.gene058762:CDS |
TCCGACACCGTCACCGGCAC+CGG | 0.511549 | 3.1:-703008 | MS.gene058762:CDS |
CTGTTCCTGATGGTCGTGAA+TGG | 0.512643 | 3.1:-702553 | MS.gene058762:CDS |
TTGAAACAAGTGAGTGTCAT+GGG | 0.514216 | 3.1:-700914 | MS.gene058762:CDS |
ACTGTTGCCAATTGTTGCTA+AGG | 0.515477 | 3.1:+702495 | None:intergenic |
TTCATGCTCCAAAATTATCA+AGG | 0.518713 | 3.1:-702081 | MS.gene058762:CDS |
ACAAAGCTCCAAAATTCTGA+TGG | 0.522166 | 3.1:-700643 | MS.gene058762:CDS |
TGCCCAGTCAATGACAGAAA+AGG | 0.524540 | 3.1:-701744 | MS.gene058762:CDS |
CTCTGCTTCCGAAAGATCAA+AGG | 0.527426 | 3.1:-702312 | MS.gene058762:CDS |
GGAATCCAAACATTTCAAGA+AGG | 0.529320 | 3.1:-701714 | MS.gene058762:CDS |
GTGTCGGAACACATCTTCTC+CGG | 0.535373 | 3.1:+703023 | None:intergenic |
TGGGCACACCTTCCCTGTGG+AGG | 0.538744 | 3.1:+701761 | None:intergenic |
GTGGATTCTATAGATTTGGA+AGG | 0.539846 | 3.1:-701996 | MS.gene058762:CDS |
ATTTAGATTTCAAATATGAA+GGG | 0.541446 | 3.1:-702439 | MS.gene058762:CDS |
CCTCACCGCATATTTCGTCT+TGG | 0.545297 | 3.1:+700794 | None:intergenic |
ACAAGTTACTGCTTCTTGCA+CGG | 0.545719 | 3.1:-701905 | MS.gene058762:intron |
TTAGTCCTCCGAGTTTGGAA+TGG | 0.546192 | 3.1:+702362 | None:intergenic |
TCTTTGGTGTGATCTGGAGG+GGG | 0.546441 | 3.1:+702950 | None:intergenic |
AGATCAAAGGATGCTGCCAA+TGG | 0.547942 | 3.1:-702299 | MS.gene058762:CDS |
ATCGTCTATGCGAATAGTGA+AGG | 0.551631 | 3.1:-700578 | MS.gene058762:CDS |
AGTGTGCTAGTCCTAGGAAA+AGG | 0.553447 | 3.1:-700944 | MS.gene058762:CDS |
ATGTGTTCCGACACCGTCAC+CGG | 0.555592 | 3.1:-703014 | MS.gene058762:CDS |
TGTTCCTGATGGTCGTGAAT+GGG | 0.557831 | 3.1:-702552 | MS.gene058762:CDS |
AAAATTATCAAGGAAAGCAG+TGG | 0.569536 | 3.1:-702071 | MS.gene058762:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3.1:-702127 | MS.gene058762:CDS |
AAGGGAAAACAATCTATCAA+AGG | 0.593937 | 3.1:-701977 | MS.gene058762:CDS |
CAATGCAGCCTCCACAGGGA+AGG | 0.602685 | 3.1:-701769 | MS.gene058762:intron |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3.1:-701945 | MS.gene058762:CDS |
AAATTATCAAGGAAAGCAGT+GGG | 0.608378 | 3.1:-702070 | MS.gene058762:CDS |
GCTACAGTTACAGTTCCTGA+TGG | 0.609577 | 3.1:-701185 | MS.gene058762:CDS |
GTTGAAACAAGTGAGTGTCA+TGG | 0.609710 | 3.1:-700915 | MS.gene058762:CDS |
AAATTCTGATGGAAAACAGT+GGG | 0.613196 | 3.1:-700632 | MS.gene058762:CDS |
TCGTCTATGCGAATAGTGAA+GGG | 0.615382 | 3.1:-700577 | MS.gene058762:CDS |
TGAGCTCATCAAGAAGAAGC+CGG | 0.617788 | 3.1:-700500 | MS.gene058762:CDS |
TGGATTCTATAGATTTGGAA+GGG | 0.619936 | 3.1:-701995 | MS.gene058762:CDS |
GACTGGGCACACCTTCCCTG+TGG | 0.620586 | 3.1:+701758 | None:intergenic |
AAAATTCTGATGGAAAACAG+TGG | 0.620787 | 3.1:-700633 | MS.gene058762:CDS |
ACGACCATCAGGAACAGTAA+TGG | 0.624397 | 3.1:+702559 | None:intergenic |
TAGAAACAATGAAGACTCGC+CGG | 0.625107 | 3.1:-703042 | None:intergenic |
GCTACCATTACTGTTCCTGA+TGG | 0.625778 | 3.1:-702563 | MS.gene058762:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3.1:+702123 | None:intergenic |
CCTCACTGCATAGCAGCCAA+AGG | 0.634621 | 3.1:+702241 | None:intergenic |
TCAGCAATGCGAATTACGAG+TGG | 0.638532 | 3.1:-702015 | MS.gene058762:CDS |
ACGGAAAACAATCTGTCACA+TGG | 0.644173 | 3.1:-700538 | MS.gene058762:CDS |
TCTTTGTCATGAATGGGCGA+GGG | 0.647829 | 3.1:+701683 | None:intergenic |
CTTATCCATTCCAAACTCGG+AGG | 0.649382 | 3.1:-702367 | MS.gene058762:CDS |
TAGTCCTAGGAAAAGGTCCA+AGG | 0.655098 | 3.1:-700937 | MS.gene058762:CDS |
GATCAAGAGGAAGCCTGTTG+TGG | 0.656312 | 3.1:-701932 | MS.gene058762:CDS |
ACATGCTTCTACAAGAGCAG+AGG | 0.662151 | 3.1:-700868 | MS.gene058762:CDS |
ATTGCAATGCAGCCTCCACA+GGG | 0.663913 | 3.1:-701773 | MS.gene058762:intron |
TGCTTCACAGCAAAATCACA+AGG | 0.670378 | 3.1:+700685 | None:intergenic |
TCGCATAGACGATGATCCGA+CGG | 0.678290 | 3.1:+700588 | None:intergenic |
AAAATGAGATTGAAGAAACG+CGG | 0.691481 | 3.1:-701152 | MS.gene058762:CDS |
GAATTGGGACTGAAGAAATG+TGG | 0.709005 | 3.1:-702530 | MS.gene058762:CDS |
AATCGCCAAGACGAAATATG+CGG | 0.738605 | 3.1:-700799 | MS.gene058762:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAGTTTATAAAAAGATT+TGG | - | chr3.1:700882-700901 | MS.gene058762:CDS | 15.0% |
!! | ATTTAGATTTCAAATATGAA+GGG | - | chr3.1:701048-701067 | MS.gene058762:CDS | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | - | chr3.1:701020-701039 | MS.gene058762:CDS | 15.0% |
!! | TATTTAGATTTCAAATATGA+AGG | - | chr3.1:701047-701066 | MS.gene058762:CDS | 15.0% |
!!! | AACAAAAATAAGAGTTTTTT+GGG | + | chr3.1:702664-702683 | None:intergenic | 15.0% |
!!! | AATCTTTTTATAAACTCATT+TGG | + | chr3.1:700882-700901 | None:intergenic | 15.0% |
!!! | ATTTTTTTATTCTTATCATC+AGG | + | chr3.1:701901-701920 | None:intergenic | 15.0% |
!!! | TTTTTTTATTCTTATCATCA+GGG | + | chr3.1:701900-701919 | None:intergenic | 15.0% |
!! | ATGAGTTTATAACAAGATTT+GGG | - | chr3.1:702261-702280 | MS.gene058762:CDS | 20.0% |
!! | GAATATTCAAAATTTGTATG+AGG | - | chr3.1:700617-700636 | MS.gene058762:CDS | 20.0% |
!! | GCAATAACTATTATCAATAA+AGG | + | chr3.1:701692-701711 | None:intergenic | 20.0% |
!! | TGATTTACATTTATATGTTG+CGG | - | chr3.1:701306-701325 | MS.gene058762:intron | 20.0% |
!!! | AATGAAACATACTATTTCTT+TGG | + | chr3.1:700556-700575 | None:intergenic | 20.0% |
!!! | GAACAAAAATAAGAGTTTTT+TGG | + | chr3.1:702665-702684 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATAGTATT+TGG | - | chr3.1:701267-701286 | MS.gene058762:intron | 20.0% |
!!! | TTATTTCTTATTGTTGTTGT+TGG | - | chr3.1:700693-700712 | MS.gene058762:CDS | 20.0% |
!!! | TTGTTTTCCGTTATAAAATT+AGG | + | chr3.1:702940-702959 | None:intergenic | 20.0% |
! | AAATACTATTCGTTAGGATA+TGG | - | chr3.1:702398-702417 | MS.gene058762:CDS | 25.0% |
! | ACCTATCTTTCAAATACAAA+GGG | - | chr3.1:702426-702445 | MS.gene058762:CDS | 25.0% |
! | ACTACTTCAAAACATCAAAT+TGG | - | chr3.1:702154-702173 | MS.gene058762:intron | 25.0% |
! | CTACTTCAAAACATCAAATT+GGG | - | chr3.1:702155-702174 | MS.gene058762:intron | 25.0% |
! | CTATAATACCAAACTTCAAA+AGG | + | chr3.1:702203-702222 | None:intergenic | 25.0% |
! | GATGAGTTTATAACAAGATT+TGG | - | chr3.1:702260-702279 | MS.gene058762:CDS | 25.0% |
! | GCATTAAAAATATTCAGCTT+TGG | - | chr3.1:701939-701958 | MS.gene058762:CDS | 25.0% |
! | TACCTATCTTTCAAATACAA+AGG | - | chr3.1:702425-702444 | MS.gene058762:CDS | 25.0% |
! | TACTTCAAAACATCAAATTG+GGG | - | chr3.1:702156-702175 | MS.gene058762:intron | 25.0% |
! | TATGGCTTTCATAAAATGTT+TGG | + | chr3.1:700514-700533 | None:intergenic | 25.0% |
! | TTTGCAAAATACTATTCGTT+AGG | - | chr3.1:702392-702411 | MS.gene058762:CDS | 25.0% |
!! | AATCTTGTTATAAACTCATC+TGG | + | chr3.1:702260-702279 | None:intergenic | 25.0% |
!! | AGCAACAATATTTGATTTAC+AGG | + | chr3.1:700669-700688 | None:intergenic | 25.0% |
!! | GGATTTTACTTTATAGCTTT+TGG | - | chr3.1:702714-702733 | MS.gene058762:intron | 25.0% |
!! | GGGATTTCCTAATTTTATAA+CGG | - | chr3.1:702930-702949 | MS.gene058762:intron | 25.0% |
!! | TCTTTTAATATCTGAACTGT+TGG | - | chr3.1:701655-701674 | MS.gene058762:intron | 25.0% |
!!! | AACGAAAAGAAGTGTTTTTT+GGG | + | chr3.1:701220-701239 | None:intergenic | 25.0% |
AAAATGAGATTGAAGAAACG+CGG | - | chr3.1:702335-702354 | MS.gene058762:CDS | 30.0% | |
AAAATTATCAAGGAAAGCAG+TGG | - | chr3.1:701416-701435 | MS.gene058762:intron | 30.0% | |
AAAATTCTGATGGAAAACAG+TGG | - | chr3.1:702854-702873 | MS.gene058762:intron | 30.0% | |
AAATTATCAAGGAAAGCAGT+GGG | - | chr3.1:701417-701436 | MS.gene058762:intron | 30.0% | |
AAATTCTGATGGAAAACAGT+GGG | - | chr3.1:702855-702874 | MS.gene058762:intron | 30.0% | |
AAGGGAAAACAATCTATCAA+AGG | - | chr3.1:701510-701529 | MS.gene058762:intron | 30.0% | |
AATACCAAACTTCAAAAGGA+GGG | + | chr3.1:702199-702218 | None:intergenic | 30.0% | |
AATGACAGAAAAGGAAGTTA+AGG | - | chr3.1:701752-701771 | MS.gene058762:CDS | 30.0% | |
AATGGATGAGATCAATTTAG+TGG | + | chr3.1:702770-702789 | None:intergenic | 30.0% | |
ACTATCTCTTTGTCATGAAT+GGG | + | chr3.1:701813-701832 | None:intergenic | 30.0% | |
CTAGACACCAATATTTGATT+TGG | + | chr3.1:702112-702131 | None:intergenic | 30.0% | |
TAATACCAAACTTCAAAAGG+AGG | + | chr3.1:702200-702219 | None:intergenic | 30.0% | |
TACTATCTCTTTGTCATGAA+TGG | + | chr3.1:701814-701833 | None:intergenic | 30.0% | |
TCCCTTTGTATTTGAAAGAT+AGG | + | chr3.1:702430-702449 | None:intergenic | 30.0% | |
TGGATTCTATAGATTTGGAA+GGG | - | chr3.1:701492-701511 | MS.gene058762:intron | 30.0% | |
TTCAAAACTTCAAGTGTTAC+TGG | - | chr3.1:702506-702525 | MS.gene058762:CDS | 30.0% | |
TTCATGCTCCAAAATTATCA+AGG | - | chr3.1:701406-701425 | MS.gene058762:intron | 30.0% | |
TTTCTTATCCATTCCAAACT+CGG | - | chr3.1:701117-701136 | MS.gene058762:CDS | 30.0% | |
! | ACATTTTCTTTTGCAACGAA+TGG | - | chr3.1:702363-702382 | MS.gene058762:CDS | 30.0% |
! | ACTGTTTTCCATCAGAATTT+TGG | + | chr3.1:702855-702874 | None:intergenic | 30.0% |
! | ATGTTTTCCTTAGCAACAAT+TGG | - | chr3.1:700985-701004 | MS.gene058762:CDS | 30.0% |
! | CAATATTTGATTTACAGGAG+AGG | + | chr3.1:700664-700683 | None:intergenic | 30.0% |
! | TGTTTGGACTAATTTGTGTA+TGG | + | chr3.1:700779-700798 | None:intergenic | 30.0% |
! | TTGTTGGTTGTTGTTATGTT+TGG | - | chr3.1:700709-700728 | MS.gene058762:intron | 30.0% |
!! | ACTGCTTTCCTTGATAATTT+TGG | + | chr3.1:701417-701436 | None:intergenic | 30.0% |
!!! | GAACGAAAAGAAGTGTTTTT+TGG | + | chr3.1:701221-701240 | None:intergenic | 30.0% |
!!! | GTAACACTTGAAGTTTTGAA+TGG | + | chr3.1:702506-702525 | None:intergenic | 30.0% |
!!! | GTTTTTTGGGTTGAATTCAT+TGG | + | chr3.1:702651-702670 | None:intergenic | 30.0% |
!!! | TGATAATTTTGGAGCATGAA+CGG | + | chr3.1:701406-701425 | None:intergenic | 30.0% |
ACAAAGCTCCAAAATTCTGA+TGG | - | chr3.1:702844-702863 | MS.gene058762:intron | 35.0% | |
GACGTGTCCAAATCAAATAT+TGG | - | chr3.1:702102-702121 | MS.gene058762:CDS | 35.0% | |
GGAATCCAAACATTTCAAGA+AGG | - | chr3.1:701773-701792 | MS.gene058762:intron | 35.0% | |
GTGGATTCTATAGATTTGGA+AGG | - | chr3.1:701491-701510 | MS.gene058762:intron | 35.0% | |
TATGGCCTTCTTGAAATGTT+TGG | + | chr3.1:701781-701800 | None:intergenic | 35.0% | |
TCCAAGTTAGAACTGAAACT+AGG | - | chr3.1:702051-702070 | MS.gene058762:CDS | 35.0% | |
TCTAACTTGGAGGTTGTATT+TGG | + | chr3.1:702042-702061 | None:intergenic | 35.0% | |
TTGAAACAAGTGAGTGTCAT+GGG | - | chr3.1:702573-702592 | MS.gene058762:CDS | 35.0% | |
TTGTCAATGTCTCTGTGATT+TGG | - | chr3.1:701964-701983 | MS.gene058762:CDS | 35.0% | |
! | AAACTGTGTCATTGGATTGT+TGG | - | chr3.1:702005-702024 | MS.gene058762:CDS | 35.0% |
! | AAATGTTTGGAGTCTTTCTC+CGG | + | chr3.1:700501-700520 | None:intergenic | 35.0% |
! | ACGAGTGGATTCTATAGATT+TGG | - | chr3.1:701487-701506 | MS.gene058762:intron | 35.0% |
! | ACTATTTCTTTGGTGTGATC+TGG | + | chr3.1:700546-700565 | None:intergenic | 35.0% |
! | CATTTTCTATCTCTCTCTCT+TGG | - | chr3.1:700572-700591 | MS.gene058762:CDS | 35.0% |
! | TAGTTTCAGTTCTAACTTGG+AGG | + | chr3.1:702052-702071 | None:intergenic | 35.0% |
!! | TTCCTTTTCTGTCATTGACT+GGG | + | chr3.1:701748-701767 | None:intergenic | 35.0% |
!!! | ATTCGCATTGCTGATTTTCT+TGG | + | chr3.1:701466-701485 | None:intergenic | 35.0% |
!!! | GTTTTTTGGGTTGATTCCAT+TGG | + | chr3.1:701207-701226 | None:intergenic | 35.0% |
!!! | TCAGAATTTTGGAGCTTTGT+AGG | + | chr3.1:702844-702863 | None:intergenic | 35.0% |
AAGTGAGTGTCATGGGAAAA+AGG | - | chr3.1:702580-702599 | MS.gene058762:CDS | 40.0% | |
AATCGCCAAGACGAAATATG+CGG | - | chr3.1:702688-702707 | MS.gene058762:intron | 40.0% | |
ACAACTTTGAGCTGATCAAG+AGG | - | chr3.1:701542-701561 | MS.gene058762:intron | 40.0% | |
ACAAGGAACATACTGCACAA+TGG | + | chr3.1:702788-702807 | None:intergenic | 40.0% | |
ACAAGTTACTGCTTCTTGCA+CGG | - | chr3.1:701582-701601 | MS.gene058762:intron | 40.0% | |
ACACTCACTTGTTTCAACCT+TGG | + | chr3.1:702570-702589 | None:intergenic | 40.0% | |
ACCAGGAACATACTACACAA+TGG | + | chr3.1:701350-701369 | None:intergenic | 40.0% | |
ACGGAAAACAATCTGTCACA+TGG | - | chr3.1:702949-702968 | MS.gene058762:CDS | 40.0% | |
ACTGTTGCCAATTGTTGCTA+AGG | + | chr3.1:700995-701014 | None:intergenic | 40.0% | |
AGGAACATACTACACAATGG+AGG | + | chr3.1:701347-701366 | None:intergenic | 40.0% | |
ATCGTCTATGCGAATAGTGA+AGG | - | chr3.1:702909-702928 | MS.gene058762:intron | 40.0% | |
ATGACTCGAAACTGTGTCAT+TGG | - | chr3.1:701997-702016 | MS.gene058762:CDS | 40.0% | |
ATTGGATTGTTGGAGACGAA+AGG | - | chr3.1:702015-702034 | MS.gene058762:CDS | 40.0% | |
ATTGTGACTTCTAGCACAAC+CGG | + | chr3.1:703009-703028 | None:intergenic | 40.0% | |
GAATTGGGACTGAAGAAATG+TGG | - | chr3.1:700957-700976 | MS.gene058762:CDS | 40.0% | |
GACAGCAACTCAAAACAGAA+AGG | + | chr3.1:701843-701862 | None:intergenic | 40.0% | |
GAGCTCAGACAGTTTATGTT+TGG | + | chr3.1:701158-701177 | None:intergenic | 40.0% | |
GCTTCAGCTAAGTACATGTT+TGG | + | chr3.1:700795-700814 | None:intergenic | 40.0% | |
GTTGAAACAAGTGAGTGTCA+TGG | - | chr3.1:702572-702591 | MS.gene058762:CDS | 40.0% | |
TCCATTGTGTAGTATGTTCC+TGG | - | chr3.1:701346-701365 | MS.gene058762:intron | 40.0% | |
TCGTCTATGCGAATAGTGAA+GGG | - | chr3.1:702910-702929 | MS.gene058762:intron | 40.0% | |
TGCTTCACAGCAAAATCACA+AGG | + | chr3.1:702805-702824 | None:intergenic | 40.0% | |
! | AGCATGTTTAGACACGCTTT+TGG | + | chr3.1:702606-702625 | None:intergenic | 40.0% |
! | ATTTCTTTGGTGTGATCTGG+AGG | + | chr3.1:700543-700562 | None:intergenic | 40.0% |
! | ATTTTCCAATCACGACCATC+AGG | + | chr3.1:702320-702339 | None:intergenic | 40.0% |
! | CTTCCTTTTCTGTCATTGAC+TGG | + | chr3.1:701749-701768 | None:intergenic | 40.0% |
! | GCCTAGTTTCAGTTCTAACT+TGG | + | chr3.1:702055-702074 | None:intergenic | 40.0% |
! | GTAACTTGTAACACCACAAC+AGG | + | chr3.1:701571-701590 | None:intergenic | 40.0% |
! | TCTTTTCGTTCCAAAGCCTT+TGG | - | chr3.1:701230-701249 | MS.gene058762:CDS | 40.0% |
! | TGGAGCTTTGTAGGAACATT+TGG | + | chr3.1:702835-702854 | None:intergenic | 40.0% |
! | TTTCTTTGGTGTGATCTGGA+GGG | + | chr3.1:700542-700561 | None:intergenic | 40.0% |
!! | TGTTCCTGGTGAATTTGCTA+AGG | - | chr3.1:701360-701379 | MS.gene058762:intron | 40.0% |
!!! | GTTACCCTCCTTTTGAAGTT+TGG | - | chr3.1:702192-702211 | MS.gene058762:intron | 40.0% |
AATTCCCATTCACGACCATC+AGG | + | chr3.1:700942-700961 | None:intergenic | 45.0% | |
ACACAAAGTGTGCTAGTCCT+AGG | - | chr3.1:702537-702556 | MS.gene058762:CDS | 45.0% | |
ACATGCTTCTACAAGAGCAG+AGG | - | chr3.1:702619-702638 | MS.gene058762:intron | 45.0% | |
ACGACCATCAGGAACAGTAA+TGG | + | chr3.1:700931-700950 | None:intergenic | 45.0% | |
AGATCAAAGGATGCTGCCAA+TGG | - | chr3.1:701188-701207 | MS.gene058762:CDS | 45.0% | |
AGTGTGCTAGTCCTAGGAAA+AGG | - | chr3.1:702543-702562 | MS.gene058762:CDS | 45.0% | |
CTCTGCTTCCGAAAGATCAA+AGG | - | chr3.1:701175-701194 | MS.gene058762:CDS | 45.0% | |
CTGCAGTGATAACAGCTCAT+TGG | + | chr3.1:702231-702250 | None:intergenic | 45.0% | |
CTTATCCATTCCAAACTCGG+AGG | - | chr3.1:701120-701139 | MS.gene058762:CDS | 45.0% | |
GATGGTCGTGAATGGGAATT+GGG | - | chr3.1:700942-700961 | MS.gene058762:CDS | 45.0% | |
GCTACAGTTACAGTTCCTGA+TGG | - | chr3.1:702302-702321 | MS.gene058762:CDS | 45.0% | |
GCTACCATTACTGTTCCTGA+TGG | - | chr3.1:700924-700943 | MS.gene058762:CDS | 45.0% | |
GGCAGCATCCTTTGATCTTT+CGG | + | chr3.1:701186-701205 | None:intergenic | 45.0% | |
TAGTCCTAGGAAAAGGTCCA+AGG | - | chr3.1:702550-702569 | MS.gene058762:CDS | 45.0% | |
TCAGCAATGCGAATTACGAG+TGG | - | chr3.1:701472-701491 | MS.gene058762:intron | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | + | chr3.1:701807-701826 | None:intergenic | 45.0% | |
TGAGCTCATCAAGAAGAAGC+CGG | - | chr3.1:702987-703006 | MS.gene058762:CDS | 45.0% | |
TGATGGTCGTGAATGGGAAT+TGG | - | chr3.1:700941-700960 | MS.gene058762:CDS | 45.0% | |
TGCCCAGTCAATGACAGAAA+AGG | - | chr3.1:701743-701762 | MS.gene058762:CDS | 45.0% | |
TGCTCCTTAGCAAATTCACC+AGG | + | chr3.1:701367-701386 | None:intergenic | 45.0% | |
TGGAGCATGAACGGAACATT+TGG | + | chr3.1:701397-701416 | None:intergenic | 45.0% | |
TGTTCCTGATGGTCGTGAAT+GGG | - | chr3.1:700935-700954 | MS.gene058762:CDS | 45.0% | |
TTAGTCCTCCGAGTTTGGAA+TGG | + | chr3.1:701128-701147 | None:intergenic | 45.0% | |
TTCCAAACTCGGAGGACTAA+TGG | - | chr3.1:701128-701147 | MS.gene058762:CDS | 45.0% | |
! | GGACTAGCACACTTTGTGTT+TGG | + | chr3.1:702536-702555 | None:intergenic | 45.0% |
! | TCAACCTTGGACCTTTTCCT+AGG | + | chr3.1:702557-702576 | None:intergenic | 45.0% |
! | TTCTTTGGTGTGATCTGGAG+GGG | + | chr3.1:700541-700560 | None:intergenic | 45.0% |
! | TTTTGCATGCCGAATACCGT+CGG | - | chr3.1:702883-702902 | MS.gene058762:intron | 45.0% |
!! | GTGGGAAGTTTCTGGTGTAT+TGG | - | chr3.1:701435-701454 | MS.gene058762:intron | 45.0% |
ATGAATGGGCGAGGGAAGTA+TGG | + | chr3.1:701799-701818 | None:intergenic | 50.0% | |
ATTGCAATGCAGCCTCCACA+GGG | - | chr3.1:701714-701733 | MS.gene058762:CDS | 50.0% | |
CAGTTCCTGATGGTCGTGAT+TGG | - | chr3.1:702312-702331 | MS.gene058762:CDS | 50.0% | |
CCAAGACGAAATATGCGGTG+AGG | - | chr3.1:702693-702712 | MS.gene058762:intron | 50.0% | |
CCTCACCGCATATTTCGTCT+TGG | + | chr3.1:702696-702715 | None:intergenic | 50.0% | |
CTCCATTAGTCCTCCGAGTT+TGG | + | chr3.1:701133-701152 | None:intergenic | 50.0% | |
CTCTTTGTCATGAATGGGCG+AGG | + | chr3.1:701808-701827 | None:intergenic | 50.0% | |
CTGTTCCTGATGGTCGTGAA+TGG | - | chr3.1:700934-700953 | MS.gene058762:CDS | 50.0% | |
GACGATGATCCGACGGTATT+CGG | + | chr3.1:702895-702914 | None:intergenic | 50.0% | |
GATCAAGAGGAAGCCTGTTG+TGG | - | chr3.1:701555-701574 | MS.gene058762:intron | 50.0% | |
GGAAAGCAGTGGGAAGTTTC+TGG | - | chr3.1:701427-701446 | MS.gene058762:intron | 50.0% | |
GTGTCGGAACACATCTTCTC+CGG | + | chr3.1:700467-700486 | None:intergenic | 50.0% | |
TATTGCAATGCAGCCTCCAC+AGG | - | chr3.1:701713-701732 | MS.gene058762:CDS | 50.0% | |
TCGCATAGACGATGATCCGA+CGG | + | chr3.1:702902-702921 | None:intergenic | 50.0% | |
TGCATAGCAGCCAAAGGCTT+TGG | + | chr3.1:701243-701262 | None:intergenic | 50.0% | |
! | TCTTTGGTGTGATCTGGAGG+GGG | + | chr3.1:700540-700559 | None:intergenic | 50.0% |
ATGTGTTCCGACACCGTCAC+CGG | - | chr3.1:700473-700492 | MS.gene058762:CDS | 55.0% | |
CCTCACTGCATAGCAGCCAA+AGG | + | chr3.1:701249-701268 | None:intergenic | 55.0% | |
CCTTTGGCTGCTATGCAGTG+AGG | - | chr3.1:701246-701265 | MS.gene058762:intron | 55.0% | |
GTGATCTGGAGGGGGAAGTA+TGG | + | chr3.1:700532-700551 | None:intergenic | 55.0% | |
TTGGAGTCTTTCTCCGGTGC+CGG | + | chr3.1:700495-700514 | None:intergenic | 55.0% | |
CAATGCAGCCTCCACAGGGA+AGG | - | chr3.1:701718-701737 | MS.gene058762:CDS | 60.0% | |
!! | TCTTTCTCCGGTGCCGGTGA+CGG | + | chr3.1:700489-700508 | None:intergenic | 60.0% |
GACTGGGCACACCTTCCCTG+TGG | + | chr3.1:701732-701751 | None:intergenic | 65.0% | |
TGGGCACACCTTCCCTGTGG+AGG | + | chr3.1:701729-701748 | None:intergenic | 65.0% | |
TCCGACACCGTCACCGGCAC+CGG | - | chr3.1:700479-700498 | MS.gene058762:CDS | 70.0% | |
!! | TCCGGTGCCGGTGACGGTGT+CGG | + | chr3.1:700483-700502 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 700453 | 703056 | 700453 | ID=MS.gene058762 |
chr3.1 | mRNA | 700453 | 703056 | 700453 | ID=MS.gene058762.t1;Parent=MS.gene058762 |
chr3.1 | exon | 702946 | 703056 | 702946 | ID=MS.gene058762.t1.exon1;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 702946 | 703056 | 702946 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
chr3.1 | exon | 702247 | 702636 | 702247 | ID=MS.gene058762.t1.exon2;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 702247 | 702636 | 702247 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
chr3.1 | exon | 701906 | 702151 | 701906 | ID=MS.gene058762.t1.exon3;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 701906 | 702151 | 701906 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
chr3.1 | exon | 701679 | 701783 | 701679 | ID=MS.gene058762.t1.exon4;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 701679 | 701783 | 701679 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
chr3.1 | exon | 700800 | 701258 | 700800 | ID=MS.gene058762.t1.exon5;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 700800 | 701258 | 700800 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
chr3.1 | exon | 700453 | 700713 | 700453 | ID=MS.gene058762.t1.exon6;Parent=MS.gene058762.t1 |
chr3.1 | CDS | 700453 | 700713 | 700453 | ID=cds.MS.gene058762.t1;Parent=MS.gene058762.t1 |
Gene Sequence |
Protein sequence |