AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058765

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058765.t1 MTR_3g005460 79.962 524 98 4 1 518 1 523 0.0 842
MS.gene058765.t1 MTR_3g005420 63.653 531 172 4 1 518 20 542 0.0 659
MS.gene058765.t1 MTR_3g005495 66.457 477 125 8 37 510 29 473 0.0 609
MS.gene058765.t1 MTR_3g005495 48.936 235 108 4 17 241 239 471 1.17e-64 218
MS.gene058765.t1 MTR_3g005495 46.122 245 93 4 272 515 28 234 3.61e-59 203
MS.gene058765.t1 MTR_3g005420 58.004 531 167 5 1 518 1 488 0.0 580
MS.gene058765.t1 MTR_3g005440 58.257 436 135 5 35 457 34 435 6.45e-162 467
MS.gene058765.t1 MTR_3g005440 50.990 202 80 3 17 200 238 438 2.42e-55 192
MS.gene058765.t1 MTR_5g070440 66.667 267 81 1 252 518 16 274 7.25e-123 361
MS.gene058765.t1 MTR_5g070440 55.147 272 97 3 1 248 1 271 4.33e-91 280
MS.gene058765.t1 MTR_3g005490 63.433 268 79 3 252 518 16 265 1.61e-112 334
MS.gene058765.t1 MTR_3g005490 55.894 263 100 4 1 248 1 262 1.88e-90 278
MS.gene058765.t1 MTR_3g005480 62.547 267 80 3 252 516 16 264 1.15e-109 327
MS.gene058765.t1 MTR_3g005480 53.409 264 106 4 1 248 1 263 2.45e-85 265
MS.gene058765.t1 MTR_7g050580 30.405 296 167 9 250 515 7 293 5.72e-28 114
MS.gene058765.t1 MTR_7g050580 28.571 154 95 2 9 150 1 151 1.79e-17 84.0
MS.gene058765.t1 MTR_3g098790 29.470 302 160 9 256 515 12 302 2.92e-27 112
MS.gene058765.t1 MTR_3g098790 25.083 303 157 9 14 250 6 304 1.76e-20 92.8
MS.gene058765.t1 MTR_7g050560 28.669 293 165 7 256 515 12 293 1.20e-25 107
MS.gene058765.t1 MTR_7g050560 35.922 103 66 0 20 122 12 114 1.24e-18 87.4
MS.gene058765.t1 MTR_1g034240 42.857 105 60 0 257 361 7 111 9.44e-24 103
MS.gene058765.t1 MTR_1g034240 43.119 109 61 1 21 128 7 115 9.11e-23 101
MS.gene058765.t1 MTR_1g034240 34.307 137 73 4 383 513 268 393 2.75e-12 68.9
MS.gene058765.t1 MTR_8g103940 24.517 518 304 19 21 512 39 495 1.29e-23 104
MS.gene058765.t1 MTR_8g103940 25.161 310 163 9 257 513 39 332 3.26e-20 94.0
MS.gene058765.t1 MTR_5g044670 26.623 308 174 9 250 515 9 306 1.66e-23 101
MS.gene058765.t1 MTR_5g044670 33.058 121 80 1 21 140 16 136 2.39e-15 77.8
MS.gene058765.t1 MTR_3g061310 27.875 287 162 9 257 511 12 285 2.85e-23 100
MS.gene058765.t1 MTR_3g061310 42.424 99 55 1 21 119 12 108 2.26e-18 85.9
MS.gene058765.t1 MTR_7g050710 26.183 317 173 9 250 515 4 310 2.75e-22 98.2
MS.gene058765.t1 MTR_7g050710 30.303 132 83 2 20 142 12 143 5.67e-16 79.3
MS.gene058765.t1 MTR_1g015350 35.484 186 84 3 1 186 1 150 3.13e-22 94.4
MS.gene058765.t1 MTR_1g015350 33.862 189 45 5 300 488 58 166 1.83e-18 83.6
MS.gene058765.t1 MTR_1g035460 25.902 305 144 10 273 513 2 288 4.98e-21 95.5
MS.gene058765.t1 MTR_1g035460 33.721 86 57 0 37 122 2 87 9.04e-12 67.4
MS.gene058765.t1 MTR_0152s0100 42.857 119 59 2 398 516 3 112 6.64e-21 88.6
MS.gene058765.t1 MTR_0152s0100 42.857 119 59 2 398 516 3 112 6.64e-21 88.6
MS.gene058765.t1 MTR_4g068320 41.346 104 61 0 254 357 3 106 7.73e-21 95.5
MS.gene058765.t1 MTR_4g068320 38.182 110 68 0 18 127 3 112 6.60e-20 92.4
MS.gene058765.t1 MTR_4g068320 33.094 139 76 4 383 515 264 391 1.89e-12 69.7
MS.gene058765.t1 MTR_3g061320 28.956 297 142 11 256 511 11 279 5.79e-20 90.5
MS.gene058765.t1 MTR_3g061320 41.000 100 57 1 20 119 11 108 2.11e-17 82.8
MS.gene058765.t1 MTR_3g061350 27.500 280 171 8 257 511 12 284 2.00e-19 89.0
MS.gene058765.t1 MTR_3g061350 27.306 271 139 8 21 237 12 278 2.41e-17 82.8
MS.gene058765.t1 MTR_3g061370 27.083 288 168 8 254 511 6 281 2.95e-19 88.6
MS.gene058765.t1 MTR_3g061370 25.632 277 144 7 17 237 5 275 3.04e-16 79.7
MS.gene058765.t1 MTR_7g050720 26.433 314 167 8 256 512 9 315 9.81e-19 87.8
MS.gene058765.t1 MTR_7g050720 36.893 103 65 0 20 122 9 111 3.55e-17 82.8
MS.gene058765.t1 MTR_7g050590 26.552 290 158 7 273 515 2 283 1.30e-18 87.0
MS.gene058765.t1 MTR_7g050590 33.036 112 68 2 37 142 2 112 9.77e-16 78.2
MS.gene058765.t1 MTR_1g108780 22.664 503 305 15 37 512 13 458 1.35e-18 89.0
MS.gene058765.t1 MTR_1g034210 39.048 105 62 1 257 361 7 109 1.46e-18 87.0
MS.gene058765.t1 MTR_1g034210 38.532 109 64 2 21 128 7 113 5.76e-17 82.4
MS.gene058765.t1 MTR_1g034210 39.048 105 62 1 257 361 7 109 3.24e-18 86.7
MS.gene058765.t1 MTR_1g034210 38.532 109 64 2 21 128 7 113 1.19e-16 82.0
MS.gene058765.t1 MTR_1g034210 34.783 138 72 5 383 513 233 359 2.36e-12 68.9
MS.gene058765.t1 MTR_3g061340 25.899 278 168 8 257 511 12 274 2.91e-17 82.4
MS.gene058765.t1 MTR_3g061340 26.255 259 147 8 21 237 12 268 1.58e-14 74.3
MS.gene058765.t1 MTR_6g043890 25.540 278 172 6 256 498 14 291 2.35e-16 80.9
MS.gene058765.t1 MTR_6g043890 26.036 169 118 3 13 174 7 175 5.64e-11 64.3
MS.gene058765.t1 MTR_1g021360 25.887 282 160 7 268 508 193 466 4.10e-16 81.3
MS.gene058765.t1 MTR_3g061290 39.000 100 59 1 20 119 11 108 5.51e-16 77.0
MS.gene058765.t1 MTR_3g061290 36.842 114 65 2 256 369 11 117 4.40e-14 71.6
MS.gene058765.t1 MTR_6g061070 24.367 316 168 10 256 511 17 321 7.86e-16 80.5
MS.gene058765.t1 MTR_3g061330 40.404 99 57 1 21 119 12 108 3.41e-15 75.9
MS.gene058765.t1 MTR_3g061330 38.614 101 60 1 257 357 12 110 7.60e-13 68.9
MS.gene058765.t1 MTR_1g021435 24.850 334 170 10 256 510 21 352 3.91e-15 77.4
MS.gene058765.t1 MTR_1g035570 24.211 285 169 7 266 513 14 288 9.14e-14 73.6
MS.gene058765.t1 MTR_1g021290 33.898 118 68 2 256 364 27 143 3.27e-13 71.2
MS.gene058765.t1 MTR_4g119990 25.000 300 183 9 256 513 14 313 3.69e-13 71.6
MS.gene058765.t1 MTR_3g061220 37.374 99 47 2 21 119 12 95 4.65e-13 66.2
MS.gene058765.t1 MTR_3g061220 34.188 117 58 3 257 369 12 113 6.59e-12 62.8
MS.gene058765.t1 MTR_1g035480 24.607 191 131 4 241 430 1 179 7.95e-13 67.4
MS.gene058765.t1 MTR_7g050640 30.556 108 75 0 14 121 6 113 1.19e-12 65.1
MS.gene058765.t1 MTR_7g050640 34.737 95 62 0 256 350 12 106 2.10e-11 61.6
MS.gene058765.t1 MTR_1g035640 22.420 281 174 7 266 514 14 282 3.33e-12 68.9
MS.gene058765.t1 MTR_1g035510 35.714 98 60 2 273 370 2 96 2.52e-11 63.9
MS.gene058765.t1 MTR_1g050845 25.368 272 186 8 255 516 7 271 4.79e-11 65.9
MS.gene058765.t1 MTR_1g021400 34.737 95 62 0 256 350 29 123 7.67e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058765.t1 AT3G18990 37.984 129 78 1 257 385 6 132 5.55e-22 97.4
MS.gene058765.t1 AT3G18990 40.404 99 59 0 21 119 6 104 1.58e-19 90.5
MS.gene058765.t1 AT3G18990 34.783 161 84 5 365 517 194 341 3.11e-14 74.3
MS.gene058765.t1 AT3G18990 37.984 129 78 1 257 385 6 132 1.22e-21 97.1
MS.gene058765.t1 AT3G18990 40.404 99 59 0 21 119 6 104 3.18e-19 89.7
MS.gene058765.t1 AT3G18990 34.568 162 85 5 365 518 194 342 6.98e-14 73.6
MS.gene058765.t1 AT4G01580 43.137 102 58 0 255 356 28 129 4.97e-21 91.3
MS.gene058765.t1 AT4G01580 36.697 109 69 0 13 121 22 130 3.08e-19 86.3
MS.gene058765.t1 AT3G18960 41.176 102 60 0 255 356 28 129 2.43e-20 89.4
MS.gene058765.t1 AT3G18960 35.780 109 70 0 13 121 22 130 4.59e-19 85.9
MS.gene058765.t1 AT3G18960 41.176 102 60 0 255 356 28 129 3.51e-20 89.4
MS.gene058765.t1 AT3G18960 35.780 109 70 0 13 121 22 130 1.09e-18 85.1
MS.gene058765.t1 AT1G26680 23.606 538 345 23 20 510 14 532 1.29e-19 93.2
MS.gene058765.t1 AT1G26680 23.606 538 345 23 20 510 14 532 1.67e-19 92.8
MS.gene058765.t1 AT1G49475 37.600 125 75 2 5 129 20 141 4.85e-18 82.8
MS.gene058765.t1 AT1G49475 38.095 126 76 2 232 356 8 132 4.19e-17 80.1
MS.gene058765.t1 AT1G26680 22.752 545 352 23 20 510 14 543 2.98e-16 82.4
MS.gene058765.t1 AT1G26680 22.727 528 341 22 37 510 16 530 1.86e-15 80.1
MS.gene058765.t1 AT3G18960 40.000 85 51 0 272 356 8 92 6.38e-15 73.2
MS.gene058765.t1 AT3G18960 36.471 85 54 0 37 121 9 93 3.40e-14 71.2
MS.gene058765.t1 AT2G24645 21.526 511 347 18 18 507 3 480 5.66e-14 74.7
MS.gene058765.t1 AT1G49480 32.857 140 78 3 383 517 98 226 8.41e-14 71.2
MS.gene058765.t1 AT1G49480 32.857 140 78 3 383 517 98 226 8.41e-14 71.2
MS.gene058765.t1 AT1G49480 32.857 140 78 3 383 517 98 226 8.41e-14 71.2
MS.gene058765.t1 AT1G26680 22.562 523 344 20 20 499 14 518 9.70e-14 74.7
MS.gene058765.t1 AT2G24645 21.018 452 308 14 76 507 44 466 1.09e-13 73.9
MS.gene058765.t1 AT2G24645 21.018 452 308 14 76 507 66 488 1.41e-13 73.6
MS.gene058765.t1 AT1G26680 23.391 466 301 19 20 447 14 461 1.53e-13 73.9
MS.gene058765.t1 AT4G31690 25.564 266 170 9 19 266 12 267 1.34e-12 68.6
MS.gene058765.t1 AT2G24645 23.925 372 262 14 19 378 4 366 2.11e-11 66.2
MS.gene058765.t1 AT4G31680 22.124 339 225 12 18 335 11 331 4.75e-11 65.5

Find 101 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGAATTTACGAGCTTTAT+AGG 0.186540 3.1:+723282 None:intergenic
AGTAATATCCTTTGATCTTT+TGG 0.190901 3.1:+724846 None:intergenic
GGATGGTCTTATTTGGAAAA+TGG 0.199369 3.1:-723807 MS.gene058765:CDS
ATGGAATCCGTAGATTTCTT+AGG 0.206073 3.1:-724543 MS.gene058765:CDS
CTGTTCTGGATGGTCTTATT+TGG 0.222871 3.1:-723814 MS.gene058765:CDS
GAATACTATTCCATTTATTA+TGG 0.231914 3.1:-725009 MS.gene058765:CDS
GAACGAAAAGAAGTGTTTAT+TGG 0.235783 3.1:+724811 None:intergenic
AACATTATTATAAAGTCTTC+TGG 0.259297 3.1:+723869 None:intergenic
TATGGCCTTCTTAAAATGTT+TGG 0.280661 3.1:+724045 None:intergenic
TAAGTAACAACCATAATAAA+TGG 0.285633 3.1:+724999 None:intergenic
GAAGACTTTATAATAATGTT+TGG 0.300221 3.1:-723866 MS.gene058765:CDS
GATGAGTTTATAACAAGATA+TGG 0.301447 3.1:-725147 MS.gene058765:CDS
CTCCATTAGTCCTCCGAGTT+TGG 0.310150 3.1:+724899 None:intergenic
TACTATTTGTTTGTCATGAA+TGG 0.314039 3.1:+724012 None:intergenic
CCATTAGTTATTCGCATTGC+TGG 0.322446 3.1:+724562 None:intergenic
TATGTATTTCATAAAGTGTT+TGG 0.329480 3.1:+725962 None:intergenic
CACTGCATAGTGGCTGGCTT+TGG 0.335321 3.1:+724789 None:intergenic
GGCTTTATGCATTGATGATC+TGG 0.342071 3.1:+723218 None:intergenic
AACGAAAAGAAGTGTTTATT+GGG 0.345284 3.1:+724812 None:intergenic
AAACAAACAATGAGTGTTCT+AGG 0.346958 3.1:-723595 MS.gene058765:CDS
GTGGGAAGTTTCTTGTGTAT+TGG 0.358675 3.1:-724599 MS.gene058765:CDS
TGTTGTTACAGTTACTGTTC+TGG 0.374715 3.1:-723828 MS.gene058765:CDS
AAGACTTTATAATAATGTTT+GGG 0.374815 3.1:-723865 MS.gene058765:CDS
ATGAATGGGCGAGGGAAGTA+TGG 0.376143 3.1:+724027 None:intergenic
ATAAAGCTCGTAAATTCTAA+TGG 0.378322 3.1:-723279 MS.gene058765:CDS
TGAAGCATGAACGGAACATT+TGG 0.380851 3.1:+724640 None:intergenic
TATTGTGGAGCAAATATATA+AGG 0.383893 3.1:+723321 None:intergenic
AAGTGAGAGTCAAGGAAATA+AGG 0.405204 3.1:-723546 MS.gene058765:CDS
TCCCTTCGTATTTGAAAGAC+AGG 0.408933 3.1:+723699 None:intergenic
ACTATTTGTTTGTCATGAAT+GGG 0.410462 3.1:+724013 None:intergenic
CCAGCAATGCGAATAACTAA+TGG 0.412619 3.1:-724562 MS.gene058765:CDS
TGCAGGCTGAGAAGGAAGTT+AGG 0.415021 3.1:-724072 MS.gene058765:intron
TTCCAAACTCGGAGGACTAA+TGG 0.416125 3.1:-724901 MS.gene058765:CDS
GAGCTCGGACAGTTTATGTT+TGG 0.416979 3.1:+724874 None:intergenic
TTTGTTTCTCCACTAGTACT+TGG 0.417438 3.1:+723611 None:intergenic
TTGGAATCGTTCTCCGGCTC+CGG 0.422451 3.1:+725981 None:intergenic
ACTCTCACTTGTTTCAACCT+TGG 0.424742 3.1:+723559 None:intergenic
TATCTTGTTATAAACTCATC+TGG 0.429283 3.1:+725150 None:intergenic
TGGAATCCGTAGATTTCTTA+GGG 0.446234 3.1:-724542 MS.gene058765:CDS
TACTTAGATTTCAAGTATGA+AGG 0.453515 3.1:-724982 MS.gene058765:CDS
GTAACTTGTAACACCACAAC+AGG 0.456427 3.1:+724466 None:intergenic
CTGTTCCCGATGGTTGTGAT+TGG 0.457952 3.1:-725095 MS.gene058765:CDS
TTAGCACAACTGGACTCTCC+TGG 0.465043 3.1:+723103 None:intergenic
TCGTTCTCCGGCTCCGGCGA+CGG 0.470201 3.1:+725987 None:intergenic
ATGTGTTCCGTCGCCGGAGC+CGG 0.471949 3.1:-725994 MS.gene058765:CDS
AAGTGTTTGGAATCGTTCTC+CGG 0.472614 3.1:+725975 None:intergenic
AGGCAGAACAATCTGTCATA+TGG 0.474080 3.1:-723150 MS.gene058765:CDS
TGTTCCCGATGGTTGTGATT+GGG 0.478145 3.1:-725094 MS.gene058765:CDS
TTTCTTATCCATTCCAAACT+CGG 0.478870 3.1:-724912 MS.gene058765:CDS
ACATTTAGCTTCAGATATTG+TGG 0.490807 3.1:+723306 None:intergenic
ACAATGAGTGTTCTAGGCCT+AGG 0.492333 3.1:-723589 MS.gene058765:CDS
TATTGAATTGCAGGCTGAGA+AGG 0.498763 3.1:-724080 MS.gene058765:intron
GAGAAGATGTGTTCCGTCGC+CGG 0.508033 3.1:-726000 MS.gene058765:CDS
ATGAGTTTATAACAAGATAT+GGG 0.513374 3.1:-725146 MS.gene058765:CDS
GCAGGCTGAGAAGGAAGTTA+GGG 0.514660 3.1:-724071 MS.gene058765:intron
GCGACGGAACACATCTTCTC+CGG 0.518324 3.1:+726003 None:intergenic
TCCTGTCTTTCAAATACGAA+GGG 0.519809 3.1:-723700 MS.gene058765:CDS
TATTATATTTGATGCAACTT+CGG 0.522012 3.1:-723660 MS.gene058765:CDS
TTCATGCTTCAAAATTCTCA+AGG 0.523168 3.1:-724628 MS.gene058765:CDS
AGATCATCAATGCATAAAGC+CGG 0.526850 3.1:-723216 MS.gene058765:CDS
TATTTGCATTGCTGATGACC+CGG 0.531078 3.1:+723197 None:intergenic
TTGTGTGTTTGAGCTGATCC+AGG 0.531256 3.1:-723121 MS.gene058765:CDS
TTAGTCCTCCGAGTTTGGAA+TGG 0.546192 3.1:+724904 None:intergenic
AGTGTTCTAGGCCTAGGAAA+AGG 0.546834 3.1:-723583 MS.gene058765:CDS
TTGTTTGTCATGAATGGGCG+AGG 0.546897 3.1:+724018 None:intergenic
AATCCTCACTGCATAGTGGC+TGG 0.548217 3.1:+724783 None:intergenic
AATATCCCAATCACAACCAT+CGG 0.550561 3.1:+725089 None:intergenic
GAATACTATTCGTTAAGATA+CGG 0.552100 3.1:-723728 MS.gene058765:CDS
AGATCAAAGGATATTACTTG+TGG 0.558854 3.1:-724841 MS.gene058765:CDS
CTCTGCTTCCAAAAGATCAA+AGG 0.559021 3.1:-724854 MS.gene058765:CDS
GTTACAGTTACTGTTCTGGA+TGG 0.559754 3.1:-723824 MS.gene058765:CDS
TGTTCCTAGTGAATTTGCTA+AGG 0.564882 3.1:-724674 MS.gene058765:CDS
TAAATTCTAATGGAGATGAG+TGG 0.570954 3.1:-723269 MS.gene058765:CDS
TTCCTGTCTTTCAAATACGA+AGG 0.575827 3.1:-723701 MS.gene058765:CDS
TTTACTTTAAGCTGATCAAG+AGG 0.576543 3.1:-724492 MS.gene058765:CDS
AGGGAAAACAAGTTATCAGA+TGG 0.579643 3.1:-724523 MS.gene058765:CDS
AAAATTCTCAAGGAAAGCAG+TGG 0.582056 3.1:-724618 MS.gene058765:CDS
ATATCCCAATCACAACCATC+GGG 0.582201 3.1:+725090 None:intergenic
GATCATCAATGCATAAAGCC+GGG 0.584913 3.1:-723215 MS.gene058765:CDS
GTAAAATCCTCACTGCATAG+TGG 0.585890 3.1:+724779 None:intergenic
ATCAGCAATGCAAATAACGC+AGG 0.590408 3.1:-723190 MS.gene058765:CDS
AAATTCTAATGGAGATGAGT+GGG 0.591055 3.1:-723268 MS.gene058765:CDS
TCTTGTGTATTGGATAGACC+AGG 0.594481 3.1:-724589 MS.gene058765:CDS
AAATGCTTATAAAAGGGCAG+AGG 0.610033 3.1:-723507 MS.gene058765:CDS
GCTGCAATTACTGTTCCCGA+TGG 0.616660 3.1:-725105 MS.gene058765:CDS
AAGAAACAATGAAGACTCGC+CGG 0.617368 3.1:-726022 None:intergenic
ACAAGTTACAACGTTTCGCA+CGG 0.620954 3.1:-724452 MS.gene058765:intron
AAATTCTCAAGGAAAGCAGT+GGG 0.627522 3.1:-724617 MS.gene058765:CDS
GATATTGAACTAAAGAAATG+TGG 0.634743 3.1:-725072 MS.gene058765:CDS
GTTGAAACAAGTGAGAGTCA+AGG 0.642586 3.1:-723554 MS.gene058765:CDS
TAGGCCTAGGAAAAGGTCCA+AGG 0.645601 3.1:-723576 MS.gene058765:CDS
AAAAGTCACGATATTTCGTG+TGG 0.648071 3.1:-723082 MS.gene058765:CDS
TGCTCCTTAGCAAATTCACT+AGG 0.648825 3.1:+724670 None:intergenic
CTTATCCATTCCAAACTCGG+AGG 0.649382 3.1:-724909 MS.gene058765:CDS
TGTTTGTCATGAATGGGCGA+GGG 0.652999 3.1:+724019 None:intergenic
AAAATGGACTTGAAGAAATG+TGG 0.654458 3.1:-723791 MS.gene058765:CDS
GATCAAGAGGAAGCCTGTTG+TGG 0.656312 3.1:-724479 MS.gene058765:CDS
TCAGCAATGCAAATAACGCA+GGG 0.661161 3.1:-723189 MS.gene058765:CDS
TCTCACCGCATGTCTTCCCG+TGG 0.662233 3.1:+723433 None:intergenic
AATCACCACGGGAAGACATG+CGG 0.676904 3.1:-723438 MS.gene058765:intron
GGACTTGAAGAAATGTGGCG+AGG 0.740403 3.1:-723786 MS.gene058765:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGTAATTCATATTATAT+AGG - chr3.1:724729-724748 MS.gene058765:intron 10.0%
!! AAGACTTTATAATAATGTTT+GGG - chr3.1:725214-725233 MS.gene058765:intron 15.0%
!! TCATTGTTTATAATTTGAAT+TGG - chr3.1:724941-724960 MS.gene058765:CDS 15.0%
!!! ATACAAATTATTTTATTCAC+TGG + chr3.1:724813-724832 None:intergenic 15.0%
!!! TGAATTCAACAATATATTTT+AGG - chr3.1:723427-723446 MS.gene058765:intron 15.0%
!! AACATTATTATAAAGTCTTC+TGG + chr3.1:725213-725232 None:intergenic 20.0%
!! ATGAGTTTATAACAAGATAT+GGG - chr3.1:723933-723952 MS.gene058765:intron 20.0%
!! GAAGACTTTATAATAATGTT+TGG - chr3.1:725213-725232 MS.gene058765:intron 20.0%
!! GAATACTATTCCATTTATTA+TGG - chr3.1:724070-724089 MS.gene058765:CDS 20.0%
!! GTCTAAAAATGCTTATAAAA+GGG - chr3.1:725566-725585 MS.gene058765:intron 20.0%
!! TAAGTAACAACCATAATAAA+TGG + chr3.1:724083-724102 None:intergenic 20.0%
!! TAGTGTAATTGTTGAAATTT+GGG - chr3.1:723602-723621 MS.gene058765:CDS 20.0%
!! TATTATATTTGATGCAACTT+CGG - chr3.1:725419-725438 MS.gene058765:intron 20.0%
!! TCATCTATTACTATTAGAAA+TGG + chr3.1:723887-723906 None:intergenic 20.0%
!! TGTCTAAAAATGCTTATAAA+AGG - chr3.1:725565-725584 MS.gene058765:intron 20.0%
!! TTCATATTATATAGGTAGTT+TGG - chr3.1:724737-724756 MS.gene058765:intron 20.0%
!!! GGATTTTACTTTATAGTATT+TGG - chr3.1:724314-724333 MS.gene058765:intron 20.0%
!!! TATGTATTTCATAAAGTGTT+TGG + chr3.1:723120-723139 None:intergenic 20.0%
! AATTTCAACAATTACACTAC+AGG + chr3.1:723601-723620 None:intergenic 25.0%
! ACTATTTGTTTGTCATGAAT+GGG + chr3.1:725069-725088 None:intergenic 25.0%
! AGTGTAATTGTTGAAATTTG+GGG - chr3.1:723603-723622 MS.gene058765:CDS 25.0%
! ATAAAGCTCGTAAATTCTAA+TGG - chr3.1:725800-725819 MS.gene058765:intron 25.0%
! GAATACTATTCGTTAAGATA+CGG - chr3.1:725351-725370 MS.gene058765:intron 25.0%
! GATATTGAACTAAAGAAATG+TGG - chr3.1:724007-724026 MS.gene058765:intron 25.0%
! GATGAGTTTATAACAAGATA+TGG - chr3.1:723932-723951 MS.gene058765:intron 25.0%
! GTAGTGTAATTGTTGAAATT+TGG - chr3.1:723601-723620 MS.gene058765:CDS 25.0%
! TACTATTTGTTTGTCATGAA+TGG + chr3.1:725070-725089 None:intergenic 25.0%
! TATTGTGGAGCAAATATATA+AGG + chr3.1:725761-725780 None:intergenic 25.0%
! TCTATTACTATTAGAAATGG+TGG + chr3.1:723884-723903 None:intergenic 25.0%
!! AAGTTTTCTTTTGCAACAAT+TGG - chr3.1:724035-724054 MS.gene058765:CDS 25.0%
!! AGGGATTTTCTCAATTTATA+AGG - chr3.1:725909-725928 MS.gene058765:intron 25.0%
!! AGTAATATCCTTTGATCTTT+TGG + chr3.1:724236-724255 None:intergenic 25.0%
!! TACTTAGATTTCAAGTATGA+AGG - chr3.1:724097-724116 MS.gene058765:intron 25.0%
!! TATCTTGTTATAAACTCATC+TGG + chr3.1:723932-723951 None:intergenic 25.0%
!! TGATTTTTGAACGAAAATGA+GGG + chr3.1:725626-725645 None:intergenic 25.0%
!! TTAGAATTTACGAGCTTTAT+AGG + chr3.1:725800-725819 None:intergenic 25.0%
!! TTTGAGTTACATTTATGATG+CGG - chr3.1:724351-724370 MS.gene058765:intron 25.0%
!!! AACGAAAAGAAGTGTTTATT+GGG + chr3.1:724270-724289 None:intergenic 25.0%
!!! ACTATTTCTTTTGTATGATC+AGG + chr3.1:723152-723171 None:intergenic 25.0%
!!! AGTAAGTGTTGAGTTATTTA+TGG - chr3.1:725695-725714 MS.gene058765:intron 25.0%
!!! ATGTTTACTTTTGCAACAAA+TGG - chr3.1:725316-725335 MS.gene058765:intron 25.0%
!!! GAATTTCACTTTCTAGTTTT+TGG - chr3.1:725667-725686 MS.gene058765:intron 25.0%
AAACAAACAATGAGTGTTCT+AGG - chr3.1:725484-725503 MS.gene058765:intron 30.0%
AAATTCTAATGGAGATGAGT+GGG - chr3.1:725811-725830 MS.gene058765:intron 30.0%
ACATCAGTTCAGATATTAGA+AGG + chr3.1:724710-724729 None:intergenic 30.0%
AGATCAAAGGATATTACTTG+TGG - chr3.1:724238-724257 MS.gene058765:intron 30.0%
AGTTTAACTGTGAAACTTTG+AGG - chr3.1:723226-723245 MS.gene058765:CDS 30.0%
ATGAATAATGAACTCGTATG+TGG + chr3.1:724925-724944 None:intergenic 30.0%
CATATCACTTATTGAATTGC+AGG - chr3.1:724990-725009 MS.gene058765:CDS 30.0%
CTGATACCATGTTGAAATTT+GGG - chr3.1:723809-723828 MS.gene058765:CDS 30.0%
GAAGGAAAGATCAATTTCAA+TGG + chr3.1:725723-725742 None:intergenic 30.0%
TAAATTCTAATGGAGATGAG+TGG - chr3.1:725810-725829 MS.gene058765:intron 30.0%
TACTATTAGAAATGGTGGTT+GGG + chr3.1:723879-723898 None:intergenic 30.0%
TATGGCCTTCTTAAAATGTT+TGG + chr3.1:725037-725056 None:intergenic 30.0%
TCATCAGTTATACTATGAGA+GGG + chr3.1:725144-725163 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG - chr3.1:723808-723827 MS.gene058765:CDS 30.0%
TGATACCATGTTGAAATTTG+GGG - chr3.1:723810-723829 MS.gene058765:CDS 30.0%
TTACTATTAGAAATGGTGGT+TGG + chr3.1:723880-723899 None:intergenic 30.0%
TTCATGCTTCAAAATTCTCA+AGG - chr3.1:724451-724470 MS.gene058765:intron 30.0%
TTTACTTTAAGCTGATCAAG+AGG - chr3.1:724587-724606 MS.gene058765:CDS 30.0%
TTTCTTATCCATTCCAAACT+CGG - chr3.1:724167-724186 MS.gene058765:intron 30.0%
! AAAATGGACTTGAAGAAATG+TGG - chr3.1:725288-725307 MS.gene058765:intron 30.0%
! ACATTTAGCTTCAGATATTG+TGG + chr3.1:725776-725795 None:intergenic 30.0%
! ATTTCTTTTGTATGATCAGG+AGG + chr3.1:723149-723168 None:intergenic 30.0%
! CTTGAGAAGAGTATATAAAG+AGG + chr3.1:723674-723693 None:intergenic 30.0%
! GGACATTCATTTTCATTCTA+AGG - chr3.1:723392-723411 MS.gene058765:intron 30.0%
! GTGATTTTTGAACGAAAATG+AGG + chr3.1:725627-725646 None:intergenic 30.0%
! TGTTTTCCCTAAGAAATCTA+CGG + chr3.1:724546-724565 None:intergenic 30.0%
! TTTTCGTTCAAAAATCACCA+CGG - chr3.1:725629-725648 MS.gene058765:intron 30.0%
!! GAACGAAAAGAAGTGTTTAT+TGG + chr3.1:724271-724290 None:intergenic 30.0%
!! GGAATCCAAACATTTTAAGA+AGG - chr3.1:725029-725048 MS.gene058765:CDS 30.0%
!!! TGAGAATTTTGAAGCATGAA+CGG + chr3.1:724451-724470 None:intergenic 30.0%
AAAAGTCACGATATTTCGTG+TGG - chr3.1:725997-726016 MS.gene058765:CDS 35.0%
AAAATTCTCAAGGAAAGCAG+TGG - chr3.1:724461-724480 MS.gene058765:CDS 35.0%
AAATGCTTATAAAAGGGCAG+AGG - chr3.1:725572-725591 MS.gene058765:intron 35.0%
AAATTCTCAAGGAAAGCAGT+GGG - chr3.1:724462-724481 MS.gene058765:CDS 35.0%
AAGTGAGAGTCAAGGAAATA+AGG - chr3.1:725533-725552 MS.gene058765:intron 35.0%
AATATCCCAATCACAACCAT+CGG + chr3.1:723993-724012 None:intergenic 35.0%
ACTAGGAACATACTACACAA+TGG + chr3.1:724395-724414 None:intergenic 35.0%
AGATCATCAATGCATAAAGC+CGG - chr3.1:725863-725882 MS.gene058765:intron 35.0%
AGGGAAAACAAGTTATCAGA+TGG - chr3.1:724556-724575 MS.gene058765:CDS 35.0%
ATCAGTTATACTATGAGAGG+GGG + chr3.1:725142-725161 None:intergenic 35.0%
ATGGAATCCGTAGATTTCTT+AGG - chr3.1:724536-724555 MS.gene058765:CDS 35.0%
CATCAGTTATACTATGAGAG+GGG + chr3.1:725143-725162 None:intergenic 35.0%
CTCATCAGTTATACTATGAG+AGG + chr3.1:725145-725164 None:intergenic 35.0%
GTAAGTTAGTGTATACAGAG+AGG + chr3.1:723279-723298 None:intergenic 35.0%
TCAAAAACTCCAAGTACTAG+TGG - chr3.1:725459-725478 MS.gene058765:intron 35.0%
TCCTGTCTTTCAAATACGAA+GGG - chr3.1:725379-725398 MS.gene058765:intron 35.0%
TGGAATCCGTAGATTTCTTA+GGG - chr3.1:724537-724556 MS.gene058765:CDS 35.0%
TGTTGTTACAGTTACTGTTC+TGG - chr3.1:725251-725270 MS.gene058765:intron 35.0%
TTCCTGTCTTTCAAATACGA+AGG - chr3.1:725378-725397 MS.gene058765:intron 35.0%
TTTCGTTCAAAAATCACCAC+GGG - chr3.1:725630-725649 MS.gene058765:intron 35.0%
! AACGAAAATGAGGGTTTTTC+GGG + chr3.1:725617-725636 None:intergenic 35.0%
! ATTTTATTCACTGGCACACT+TGG + chr3.1:724804-724823 None:intergenic 35.0%
! CTAGTACTTGGAGTTTTTGA+TGG + chr3.1:725459-725478 None:intergenic 35.0%
! GAACGAAAATGAGGGTTTTT+CGG + chr3.1:725618-725637 None:intergenic 35.0%
! GAGAAGAGTATATAAAGAGG+AGG + chr3.1:723671-723690 None:intergenic 35.0%
! TTGTCACTATGTTGCTTCTT+TGG - chr3.1:723371-723390 MS.gene058765:intron 35.0%
! TTTGTTTCTCCACTAGTACT+TGG + chr3.1:725471-725490 None:intergenic 35.0%
! TTTTCTTTCGCAACATGAAC+CGG - chr3.1:724882-724901 MS.gene058765:CDS 35.0%
!! GGATGGTCTTATTTGGAAAA+TGG - chr3.1:725272-725291 MS.gene058765:intron 35.0%
!! TGTTCCTAGTGAATTTGCTA+AGG - chr3.1:724405-724424 MS.gene058765:intron 35.0%
ACAAGTTACAACGTTTCGCA+CGG - chr3.1:724627-724646 MS.gene058765:CDS 40.0%
ACTCTCACTTGTTTCAACCT+TGG + chr3.1:725523-725542 None:intergenic 40.0%
AGGAACATACTACACAATGG+AGG + chr3.1:724392-724411 None:intergenic 40.0%
AGGAACATACTGCACAATGA+AGG + chr3.1:725741-725760 None:intergenic 40.0%
AGGCAGAACAATCTGTCATA+TGG - chr3.1:725929-725948 MS.gene058765:intron 40.0%
ATATCCCAATCACAACCATC+GGG + chr3.1:723992-724011 None:intergenic 40.0%
ATCAGAGCTTGTCGAATTCA+AGG + chr3.1:723794-723813 None:intergenic 40.0%
ATCAGCAATGCAAATAACGC+AGG - chr3.1:725889-725908 MS.gene058765:intron 40.0%
CCAGCAATGCGAATAACTAA+TGG - chr3.1:724517-724536 MS.gene058765:CDS 40.0%
CCATTAGTTATTCGCATTGC+TGG + chr3.1:724520-724539 None:intergenic 40.0%
CTAACTCATCCTCACAAAAC+CGG - chr3.1:723627-723646 MS.gene058765:CDS 40.0%
CTCTGCTTCCAAAAGATCAA+AGG - chr3.1:724225-724244 MS.gene058765:intron 40.0%
GATCATCAATGCATAAAGCC+GGG - chr3.1:725864-725883 MS.gene058765:intron 40.0%
GCTACCATCAATGAGCAATA+TGG - chr3.1:724777-724796 MS.gene058765:intron 40.0%
GTAAAATCCTCACTGCATAG+TGG + chr3.1:724303-724322 None:intergenic 40.0%
GTGGGAAGTTTCTTGTGTAT+TGG - chr3.1:724480-724499 MS.gene058765:CDS 40.0%
GTTGAAACAAGTGAGAGTCA+AGG - chr3.1:725525-725544 MS.gene058765:intron 40.0%
TATTGAATTGCAGGCTGAGA+AGG - chr3.1:724999-725018 MS.gene058765:CDS 40.0%
TATTTGCATTGCTGATGACC+CGG + chr3.1:725885-725904 None:intergenic 40.0%
TCAGAGCTTGTCGAATTCAA+GGG + chr3.1:723793-723812 None:intergenic 40.0%
TCAGCAATGCAAATAACGCA+GGG - chr3.1:725890-725909 MS.gene058765:intron 40.0%
TCCCTTCGTATTTGAAAGAC+AGG + chr3.1:725383-725402 None:intergenic 40.0%
TCTTGTGTATTGGATAGACC+AGG - chr3.1:724490-724509 MS.gene058765:CDS 40.0%
TGAAGCATGAACGGAACATT+TGG + chr3.1:724442-724461 None:intergenic 40.0%
TGCTCCTTAGCAAATTCACT+AGG + chr3.1:724412-724431 None:intergenic 40.0%
TGGTCCATATTGCTCATTGA+TGG + chr3.1:724784-724803 None:intergenic 40.0%
TTAGGCCCCAAATTTCAACA+TGG + chr3.1:723611-723630 None:intergenic 40.0%
! AAGTGTTTGGAATCGTTCTC+CGG + chr3.1:723107-723126 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG - chr3.1:723692-723711 MS.gene058765:CDS 40.0%
! ATCGTGACTTTTAGCACAAC+TGG + chr3.1:725989-726008 None:intergenic 40.0%
! GAGTCTTATCTATCCGATGT+GGG - chr3.1:723693-723712 MS.gene058765:CDS 40.0%
! GGCTTTATGCATTGATGATC+TGG + chr3.1:725864-725883 None:intergenic 40.0%
! GTAACTTGTAACACCACAAC+AGG + chr3.1:724616-724635 None:intergenic 40.0%
! GTTACAGTTACTGTTCTGGA+TGG - chr3.1:725255-725274 MS.gene058765:intron 40.0%
! TCTTTTGTATGATCAGGAGG+AGG + chr3.1:723146-723165 None:intergenic 40.0%
!! CTGTTCTGGATGGTCTTATT+TGG - chr3.1:725265-725284 MS.gene058765:intron 40.0%
!!! GTTTTTCGGGTTGAATGCAT+TGG + chr3.1:725604-725623 None:intergenic 40.0%
AAAACACACTCTCGCACTTG+GGG + chr3.1:724866-724885 None:intergenic 45.0%
AGAAAACACACTCTCGCACT+TGG + chr3.1:724868-724887 None:intergenic 45.0%
AGATGAGTTCCTATCACTGC+AGG - chr3.1:723901-723920 MS.gene058765:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG - chr3.1:723700-723719 MS.gene058765:CDS 45.0%
CTAACACAACCCCACAAAAC+CGG + chr3.1:723855-723874 None:intergenic 45.0%
CTTATCCATTCCAAACTCGG+AGG - chr3.1:724170-724189 MS.gene058765:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG + chr3.1:723709-723728 None:intergenic 45.0%
GAAAACACACTCTCGCACTT+GGG + chr3.1:724867-724886 None:intergenic 45.0%
GAGCTCGGACAGTTTATGTT+TGG + chr3.1:724208-724227 None:intergenic 45.0%
GATGAGTTCCTATCACTGCA+GGG - chr3.1:723902-723921 MS.gene058765:intron 45.0%
TATCTATCCGATGTGGGACT+TGG - chr3.1:723699-723718 MS.gene058765:CDS 45.0%
TGTTCCCGATGGTTGTGATT+GGG - chr3.1:723985-724004 MS.gene058765:intron 45.0%
TGTTTGTCATGAATGGGCGA+GGG + chr3.1:725063-725082 None:intergenic 45.0%
TTAGTCCTCCGAGTTTGGAA+TGG + chr3.1:724178-724197 None:intergenic 45.0%
TTCCAAACTCGGAGGACTAA+TGG - chr3.1:724178-724197 MS.gene058765:intron 45.0%
TTGTGTGTTTGAGCTGATCC+AGG - chr3.1:725958-725977 MS.gene058765:CDS 45.0%
TTGTTTGTCATGAATGGGCG+AGG + chr3.1:725064-725083 None:intergenic 45.0%
! ACAATGAGTGTTCTAGGCCT+AGG - chr3.1:725490-725509 MS.gene058765:intron 45.0%
! AGTGTTCTAGGCCTAGGAAA+AGG - chr3.1:725496-725515 MS.gene058765:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG - chr3.1:723764-723783 MS.gene058765:CDS 45.0%
! TATGTGGTGTGACTTGTGAG+TGG + chr3.1:724909-724928 None:intergenic 45.0%
! TCAACCTTGGACCTTTTCCT+AGG + chr3.1:725510-725529 None:intergenic 45.0%
!! CGGTTTTGTGAGGATGAGTT+AGG + chr3.1:723629-723648 None:intergenic 45.0%
!! GATCTTTTGGAAGCAGAGCT+CGG + chr3.1:724223-724242 None:intergenic 45.0%
!!! ATTCGCATTGCTGGTTTTCC+TGG + chr3.1:724511-724530 None:intergenic 45.0%
AATCACCACGGGAAGACATG+CGG - chr3.1:725641-725660 MS.gene058765:intron 50.0%
AATCCTCACTGCATAGTGGC+TGG + chr3.1:724299-724318 None:intergenic 50.0%
ATGAATGGGCGAGGGAAGTA+TGG + chr3.1:725055-725074 None:intergenic 50.0%
CCTAACTCATCCTCACAAGC+CGG - chr3.1:723833-723852 MS.gene058765:CDS 50.0%
CTCCATTAGTCCTCCGAGTT+TGG + chr3.1:724183-724202 None:intergenic 50.0%
CTGGAATTCCCTGCAGTGAT+AGG + chr3.1:723913-723932 None:intergenic 50.0%
CTGTTCCCGATGGTTGTGAT+TGG - chr3.1:723984-724003 MS.gene058765:intron 50.0%
GATCAAGAGGAAGCCTGTTG+TGG - chr3.1:724600-724619 MS.gene058765:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG + chr3.1:723649-723668 None:intergenic 50.0%
GCAGGCTGAGAAGGAAGTTA+GGG - chr3.1:725008-725027 MS.gene058765:CDS 50.0%
GCTGCAATTACTGTTCCCGA+TGG - chr3.1:723974-723993 MS.gene058765:intron 50.0%
GGACTTGAAGAAATGTGGCG+AGG - chr3.1:725293-725312 MS.gene058765:intron 50.0%
GGTGCGTGAATAGGTTTAGG+TGG - chr3.1:723767-723786 MS.gene058765:CDS 50.0%
TAGGCCTAGGAAAAGGTCCA+AGG - chr3.1:725503-725522 MS.gene058765:intron 50.0%
TGCAGGCTGAGAAGGAAGTT+AGG - chr3.1:725007-725026 MS.gene058765:CDS 50.0%
TTAGCACAACTGGACTCTCC+TGG + chr3.1:725979-725998 None:intergenic 50.0%
!! ATCCTCACAAGCCGGTTTTG+TGG - chr3.1:723841-723860 MS.gene058765:CDS 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr3.1:723641-723660 MS.gene058765:CDS 50.0%
!! CCTCACAAAACCGGCTTGTA+AGG - chr3.1:723636-723655 MS.gene058765:CDS 50.0%
!! CCTTACAAGCCGGTTTTGTG+AGG + chr3.1:723639-723658 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - chr3.1:723853-723872 MS.gene058765:CDS 50.0%
!! TCCTCACAAGCCGGTTTTGT+GGG - chr3.1:723842-723861 MS.gene058765:CDS 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG - chr3.1:723758-723777 MS.gene058765:CDS 50.0%
AAGCCAGCCACTATGCAGTG+AGG - chr3.1:724293-724312 MS.gene058765:intron 55.0%
GAGAAGATGTGTTCCGTCGC+CGG - chr3.1:723079-723098 MS.gene058765:CDS 55.0%
GCGACGGAACACATCTTCTC+CGG + chr3.1:723079-723098 None:intergenic 55.0%
TTGGAATCGTTCTCCGGCTC+CGG + chr3.1:723101-723120 None:intergenic 55.0%
! CCGGCTTGTGAGGATGAGTT+AGG + chr3.1:723836-723855 None:intergenic 55.0%
! GGTGTGACTTGTGAGTGGTC+CGG + chr3.1:724904-724923 None:intergenic 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + chr3.1:723751-723770 None:intergenic 55.0%
!! CACTGCATAGTGGCTGGCTT+TGG + chr3.1:724293-724312 None:intergenic 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG - chr3.1:723843-723862 MS.gene058765:CDS 55.0%
CCTCACGCCCAGCACTCTTT+GGG - chr3.1:723741-723760 MS.gene058765:CDS 60.0%
TCTCACCGCATGTCTTCCCG+TGG + chr3.1:725649-725668 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + chr3.1:723752-723771 None:intergenic 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + chr3.1:723741-723760 None:intergenic 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + chr3.1:723742-723761 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + chr3.1:723743-723762 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG + chr3.1:723846-723865 None:intergenic 60.0%
ATGTGTTCCGTCGCCGGAGC+CGG - chr3.1:723085-723104 MS.gene058765:CDS 65.0%
CCCTCACGCCCAGCACTCTT+TGG - chr3.1:723740-723759 MS.gene058765:CDS 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - chr3.1:723746-723765 MS.gene058765:CDS 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG + chr3.1:723731-723750 None:intergenic 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG + chr3.1:723732-723751 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG + chr3.1:723740-723759 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + chr3.1:723744-723763 None:intergenic 65.0%
TCGTTCTCCGGCTCCGGCGA+CGG + chr3.1:723095-723114 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 723065 726036 723065 ID=MS.gene058765
chr3.1 mRNA 723065 726036 723065 ID=MS.gene058765.t1;Parent=MS.gene058765
chr3.1 exon 725932 726036 725932 ID=MS.gene058765.t1.exon1;Parent=MS.gene058765.t1
chr3.1 CDS 725932 726036 725932 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
chr3.1 exon 724792 725178 724792 ID=MS.gene058765.t1.exon2;Parent=MS.gene058765.t1
chr3.1 CDS 724792 725178 724792 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
chr3.1 exon 724453 724698 724453 ID=MS.gene058765.t1.exon3;Parent=MS.gene058765.t1
chr3.1 CDS 724453 724698 724453 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
chr3.1 exon 724015 724089 724015 ID=MS.gene058765.t1.exon4;Parent=MS.gene058765.t1
chr3.1 CDS 724015 724089 724015 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
chr3.1 exon 723439 723897 723439 ID=MS.gene058765.t1.exon5;Parent=MS.gene058765.t1
chr3.1 CDS 723439 723897 723439 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
chr3.1 exon 723065 723349 723065 ID=MS.gene058765.t1.exon6;Parent=MS.gene058765.t1
chr3.1 CDS 723065 723349 723065 ID=cds.MS.gene058765.t1;Parent=MS.gene058765.t1
Gene Sequence

>MS.gene058765

ATGAAGACTCGCCGGAGAAGATGTGTTCCGTCGCCGGAGCCGGAGAACGATTCCAAACACTTTATGAAATACATACTTCCTCCTCCTGATCATACAAAAGAAATAGTATGTTTCATTTTCATTTTCTATCTCTCTCTCTTTTCATATTATCAGTTACTATTAGTTTAACTGTGAAACTTTGAGGATATGATGATCAGCTTTACTAACTACACCTCTCTGTATACACTAACTTACTTGCTACTTTTATTATGTATTCATCTCAATAATCATGTATTTTTTATTATTATTATTAATCATCAAATGTGCTTGTCACTATGTTGCTTCTTTGGACATTCATTTTCATTCTAAGGTTGTAAAAATAATGAATTCAACAATATATTTTAGGCTATAAATTATATTTCGAGTTTGAAAACTTCTAATCTTAGTTTCAACTTTGAATTTAGCTGAAACTCTTTATGAGATTAATTTCTTAAATTATGAGATTAATTTCTTAAATTAATTGTAGAAATATCATAAACTTTGAAGTTTAGTGACCTGTAGTGTAATTGTTGAAATTTGGGGCCTAACTCATCCTCACAAAACCGGCTTGTAAGGTGAGGATTGCCTCCTCTTTATATACTCTTCTCAAGAGTCTTATCTATCCGATGTGGGACTTGGGTTTTTCCCAATACACCCCCCTCACGCCCAGCACTCTTTGGGCTTGGTGCGTGAATAGGTTTAGGTGGCCCTTGAATTCGACAAGCTCTGATACCATGTTGAAATTTGGGGCCTAACTCATCCTCACAAGCCGGTTTTGTGGGGTTGTGTTAGGCCCAACCACCATTTCTAATAGTAATAGATGAGTTCCTATCACTGCAGGGAATTCCAGATGAGTTTATAACAAGATATGGGAATGAACTCGACAATGTTGCTGCAATTACTGTTCCCGATGGTTGTGATTGGGATATTGAACTAAAGAAATGTGGCAGTGAAGTTTTCTTTTGCAACAATTGGCAACAGTTTGTAGAATACTATTCCATTTATTATGGTTGTTACTTAGATTTCAAGTATGAAGGAAATTCAAAGTTTAATGTTGTTATATACGATGCAACTTCTGTTGAGATTTCTTATCCATTCCAAACTCGGAGGACTAATGGAGAACCAAACATAAACTGTCCGAGCTCTGCTTCCAAAAGATCAAAGGATATTACTTGTGGAAGCAACCCAATAAACACTTCTTTTCGTTCCAAAGCCAGCCACTATGCAGTGAGGATTTTACTTTATAGTATTTGGTTTTGTAGTTAATATTTGAGTTACATTTATGATGCGGCTTAAATTGATTGCTCCTCCATTGTGTAGTATGTTCCTAGTGAATTTGCTAAGGAGCATCTGAAGCCAAATGTTCCGTTCATGCTTCAAAATTCTCAAGGAAAGCAGTGGGAAGTTTCTTGTGTATTGGATAGACCAGGAAAACCAGCAATGCGAATAACTAATGGAATCCGTAGATTTCTTAGGGAAAACAAGTTATCAGATGGAGTTACTCTTTACTTTAAGCTGATCAAGAGGAAGCCTGTTGTGGTGTTACAAGTTACAACGTTTCGCACGGTAAAAAGTTGTTCACATTTGTTTGTTCATCGATTCTATTTTCATTTTAACACTTTTTCCTTCTAATATCTGAACTGATGTATTGTAATTCATATTATATAGGTAGTTTGGTTTTTTAGTTACTATTAGCTACCATCAATGAGCAATATGGACCAAGTGTGCCAGTGAATAAAATAATTTGTATTCATTCTTTCTAATTTTTTAATTTCAAATACCCCAAGTGCGAGAGTGTGTTTTCTTTCGCAACATGAACCGGACCACTCACAAGTCACACCACATACGAGTTCATTATTCATTGTTTATAATTTGAATTGGTGATCTGAATGTGTGAAGCGTTAACGCATATCACTTATTGAATTGCAGGCTGAGAAGGAAGTTAGGGAATCCAAACATTTTAAGAAGGCCATACTTCCCTCGCCCATTCATGACAAACAAATAGTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCATAGTATAACTGATGAGTTATTTTATAATCAATTAAACAAGTGATGATAAATGCAGAGAATTCCAGAAGACTTTATAATAATGTTTGGGAATGAACTCAAGAATGTTGTTACAGTTACTGTTCTGGATGGTCTTATTTGGAAAATGGACTTGAAGAAATGTGGCGAGGATGTTTACTTTTGCAACAAATGGCAACAGTTTGCAGAATACTATTCGTTAAGATACGGTTGTTTCCTGTCTTTCAAATACGAAGGGAATTCAAATTTTAGTGTTATTATATTTGATGCAACTTCGGTTGAAATTTGCTATCCATCAAAAACTCCAAGTACTAGTGGAGAAACAAACAATGAGTGTTCTAGGCCTAGGAAAAGGTCCAAGGTTGAAACAAGTGAGAGTCAAGGAAATAAGGTCAAACACATGTCTAAAAATGCTTATAAAAGGGCAGAGGATGCTGCCAATGCATTCAACCCGAAAAACCCTCATTTTCGTTCAAAAATCACCACGGGAAGACATGCGGTGAGAATTTCACTTTCTAGTTTTTGGTTTAAAGTAAGTGTTGAGTTATTTATGGTGCCATTGAAATTGATCTTTCCTTCATTGTGCAGTATGTTCCTTATATATTTGCTCCACAATATCTGAAGCTAAATGTTCCTATAAAGCTCGTAAATTCTAATGGAGATGAGTGGGAAGTTTTTTGTGCATTAGCATATAAATCCAGATCATCAATGCATAAAGCCGGGTCATCAGCAATGCAAATAACGCAGGGATTTTCTCAATTTATAAGGCAGAACAATCTGTCATATGGTGACTATTGTGTGTTTGAGCTGATCCAGGAGAGTCCAGTTGTGCTAAAAGTCACGATATTTCGTGTGGTTGACTATTGCGATTAA
Protein sequence

>MS.gene058765.t1

MKTRRRRCVPSPEPENDSKHFMKYILPPPDHTKEIGIPDEFITRYGNELDNVAAITVPDGCDWDIELKKCGSEVFFCNNWQQFVEYYSIYYGCYLDFKYEGNSKFNVVIYDATSVEISYPFQTRRTNGEPNINCPSSASKRSKDITCGSNPINTSFRSKASHYAYVPSEFAKEHLKPNVPFMLQNSQGKQWEVSCVLDRPGKPAMRITNGIRRFLRENKLSDGVTLYFKLIKRKPVVVLQVTTFRTAEKEVRESKHFKKAILPSPIHDKQIRIPEDFIIMFGNELKNVVTVTVLDGLIWKMDLKKCGEDVYFCNKWQQFAEYYSLRYGCFLSFKYEGNSNFSVIIFDATSVEICYPSKTPSTSGETNNECSRPRKRSKVETSESQGNKVKHMSKNAYKRAEDAANAFNPKNPHFRSKITTGRHAYVPYIFAPQYLKLNVPIKLVNSNGDEWEVFCALAYKSRSSMHKAGSSAMQITQGFSQFIRQNNLSYGDYCVFELIQESPVVLKVTIFRVVDYCD