Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058766.t1 | XP_024635892.1 | 82.4 | 239 | 32 | 1 | 22 | 260 | 188 | 416 | 1.10E-108 | 402.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058766.t1 | Q8L3W1 | 28.5 | 340 | 147 | 10 | 8 | 260 | 10 | 340 | 2.8e-23 | 110.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058766.t1 | G7IYE9 | 82.4 | 239 | 32 | 1 | 22 | 260 | 36 | 264 | 8.2e-109 | 402.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene058766.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058766.t1 | MTR_3g005480 | 84.937 | 239 | 26 | 1 | 22 | 260 | 36 | 264 | 1.25e-150 | 421 |
| MS.gene058766.t1 | MTR_3g005490 | 78.008 | 241 | 42 | 2 | 22 | 262 | 36 | 265 | 2.74e-134 | 380 |
| MS.gene058766.t1 | MTR_5g070440 | 70.539 | 241 | 69 | 1 | 22 | 262 | 36 | 274 | 1.72e-122 | 350 |
| MS.gene058766.t1 | MTR_3g005420 | 65.560 | 241 | 81 | 1 | 22 | 262 | 304 | 542 | 1.14e-107 | 322 |
| MS.gene058766.t1 | MTR_3g005420 | 55.556 | 234 | 78 | 4 | 22 | 253 | 55 | 264 | 1.15e-72 | 231 |
| MS.gene058766.t1 | MTR_3g005460 | 63.563 | 247 | 84 | 2 | 22 | 262 | 277 | 523 | 1.60e-103 | 310 |
| MS.gene058766.t1 | MTR_3g005460 | 55.459 | 229 | 77 | 3 | 22 | 250 | 40 | 243 | 4.94e-75 | 237 |
| MS.gene058766.t1 | MTR_3g005420 | 54.357 | 241 | 73 | 2 | 22 | 262 | 285 | 488 | 5.87e-80 | 249 |
| MS.gene058766.t1 | MTR_3g005420 | 55.556 | 234 | 78 | 4 | 22 | 253 | 36 | 245 | 1.70e-73 | 232 |
| MS.gene058766.t1 | MTR_3g005440 | 62.694 | 193 | 65 | 1 | 22 | 214 | 257 | 442 | 2.07e-75 | 236 |
| MS.gene058766.t1 | MTR_3g005440 | 50.000 | 238 | 66 | 3 | 18 | 253 | 31 | 217 | 5.85e-63 | 204 |
| MS.gene058766.t1 | MTR_3g005495 | 51.852 | 243 | 84 | 4 | 18 | 259 | 24 | 234 | 3.90e-73 | 231 |
| MS.gene058766.t1 | MTR_3g005495 | 52.766 | 235 | 90 | 6 | 22 | 254 | 258 | 473 | 1.57e-69 | 222 |
| MS.gene058766.t1 | MTR_1g015350 | 39.791 | 191 | 40 | 5 | 50 | 239 | 58 | 174 | 3.59e-29 | 108 |
| MS.gene058766.t1 | MTR_7g050710 | 30.526 | 285 | 149 | 10 | 22 | 259 | 28 | 310 | 3.70e-28 | 110 |
| MS.gene058766.t1 | MTR_3g098790 | 29.749 | 279 | 149 | 11 | 23 | 259 | 29 | 302 | 4.48e-26 | 104 |
| MS.gene058766.t1 | MTR_3g061310 | 30.597 | 268 | 153 | 8 | 19 | 255 | 20 | 285 | 5.45e-26 | 103 |
| MS.gene058766.t1 | MTR_3g061320 | 31.884 | 276 | 133 | 11 | 19 | 255 | 20 | 279 | 3.28e-25 | 101 |
| MS.gene058766.t1 | MTR_3g061370 | 29.104 | 268 | 148 | 6 | 22 | 255 | 22 | 281 | 1.57e-24 | 99.4 |
| MS.gene058766.t1 | MTR_0152s0100 | 42.982 | 114 | 62 | 1 | 147 | 260 | 2 | 112 | 1.61e-24 | 95.1 |
| MS.gene058766.t1 | MTR_0152s0100 | 42.982 | 114 | 62 | 1 | 147 | 260 | 2 | 112 | 1.61e-24 | 95.1 |
| MS.gene058766.t1 | MTR_3g061350 | 29.927 | 274 | 146 | 9 | 19 | 255 | 20 | 284 | 5.96e-24 | 97.8 |
| MS.gene058766.t1 | MTR_3g061340 | 32.061 | 262 | 146 | 10 | 19 | 255 | 20 | 274 | 8.54e-24 | 97.4 |
| MS.gene058766.t1 | MTR_7g050560 | 26.007 | 273 | 158 | 5 | 23 | 259 | 29 | 293 | 9.25e-24 | 98.2 |
| MS.gene058766.t1 | MTR_1g034240 | 48.810 | 84 | 43 | 0 | 22 | 105 | 22 | 105 | 1.12e-23 | 99.4 |
| MS.gene058766.t1 | MTR_1g034240 | 36.364 | 132 | 71 | 4 | 133 | 257 | 268 | 393 | 5.19e-16 | 77.4 |
| MS.gene058766.t1 | MTR_1g108780 | 26.804 | 291 | 151 | 8 | 20 | 257 | 10 | 291 | 2.02e-23 | 99.0 |
| MS.gene058766.t1 | MTR_8g103940 | 26.316 | 304 | 156 | 9 | 8 | 257 | 43 | 332 | 1.38e-22 | 96.7 |
| MS.gene058766.t1 | MTR_7g050590 | 24.828 | 290 | 157 | 6 | 23 | 259 | 2 | 283 | 1.77e-22 | 94.4 |
| MS.gene058766.t1 | MTR_7g050580 | 27.612 | 268 | 160 | 8 | 23 | 259 | 29 | 293 | 1.57e-21 | 92.0 |
| MS.gene058766.t1 | MTR_5g044670 | 24.460 | 278 | 166 | 6 | 23 | 259 | 32 | 306 | 2.94e-21 | 91.3 |
| MS.gene058766.t1 | MTR_1g035460 | 26.351 | 296 | 148 | 8 | 23 | 257 | 2 | 288 | 1.85e-20 | 90.1 |
| MS.gene058766.t1 | MTR_4g068320 | 38.835 | 103 | 62 | 1 | 4 | 105 | 2 | 104 | 1.59e-19 | 87.4 |
| MS.gene058766.t1 | MTR_4g068320 | 36.567 | 134 | 72 | 4 | 133 | 259 | 264 | 391 | 1.09e-16 | 79.3 |
| MS.gene058766.t1 | MTR_1g034210 | 49.333 | 75 | 38 | 0 | 22 | 96 | 22 | 96 | 1.11e-18 | 84.3 |
| MS.gene058766.t1 | MTR_1g034210 | 49.333 | 75 | 38 | 0 | 22 | 96 | 22 | 96 | 2.07e-18 | 84.0 |
| MS.gene058766.t1 | MTR_1g034210 | 33.871 | 124 | 69 | 4 | 141 | 257 | 242 | 359 | 7.57e-12 | 65.1 |
| MS.gene058766.t1 | MTR_3g061330 | 29.825 | 171 | 91 | 3 | 22 | 165 | 25 | 193 | 1.22e-17 | 80.1 |
| MS.gene058766.t1 | MTR_3g061290 | 41.509 | 106 | 59 | 2 | 19 | 122 | 20 | 124 | 1.63e-17 | 79.0 |
| MS.gene058766.t1 | MTR_7g050720 | 34.737 | 95 | 62 | 0 | 23 | 117 | 26 | 120 | 4.96e-15 | 73.9 |
| MS.gene058766.t1 | MTR_7g050640 | 34.375 | 96 | 63 | 0 | 12 | 107 | 18 | 113 | 6.83e-14 | 67.0 |
| MS.gene058766.t1 | MTR_3g061220 | 39.326 | 89 | 39 | 2 | 19 | 105 | 20 | 95 | 9.37e-13 | 63.9 |
| MS.gene058766.t1 | MTR_6g061070 | 23.288 | 292 | 161 | 8 | 23 | 255 | 34 | 321 | 2.31e-12 | 66.6 |
| MS.gene058766.t1 | MTR_4g119990 | 24.727 | 275 | 146 | 12 | 22 | 242 | 30 | 297 | 6.72e-12 | 65.1 |
| MS.gene058766.t1 | MTR_6g043890 | 22.932 | 266 | 156 | 10 | 22 | 242 | 30 | 291 | 4.66e-11 | 62.4 |
| MS.gene058766.t1 | MTR_1g035510 | 30.612 | 98 | 65 | 2 | 23 | 120 | 2 | 96 | 5.69e-11 | 61.2 |
| MS.gene058766.t1 | MTR_1g021290 | 38.202 | 89 | 54 | 1 | 12 | 100 | 33 | 120 | 8.64e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058766.t1 | AT3G18990 | 44.898 | 98 | 51 | 1 | 8 | 105 | 10 | 104 | 8.09e-22 | 93.2 |
| MS.gene058766.t1 | AT3G18990 | 36.296 | 135 | 74 | 4 | 133 | 261 | 213 | 341 | 1.66e-15 | 75.5 |
| MS.gene058766.t1 | AT3G18990 | 44.898 | 98 | 51 | 1 | 8 | 105 | 10 | 104 | 1.46e-21 | 92.8 |
| MS.gene058766.t1 | AT3G18990 | 36.029 | 136 | 75 | 4 | 133 | 262 | 213 | 342 | 3.58e-15 | 74.7 |
| MS.gene058766.t1 | AT1G49475 | 40.625 | 96 | 56 | 1 | 20 | 115 | 47 | 141 | 2.08e-18 | 80.9 |
| MS.gene058766.t1 | AT3G18960 | 40.000 | 90 | 54 | 0 | 21 | 110 | 7 | 96 | 5.97e-18 | 79.3 |
| MS.gene058766.t1 | AT3G18960 | 37.000 | 100 | 60 | 1 | 8 | 107 | 34 | 130 | 8.18e-18 | 79.3 |
| MS.gene058766.t1 | AT4G01580 | 35.922 | 103 | 63 | 1 | 8 | 110 | 34 | 133 | 9.74e-18 | 79.3 |
| MS.gene058766.t1 | AT3G18960 | 37.000 | 100 | 60 | 1 | 8 | 107 | 34 | 130 | 1.19e-17 | 79.3 |
| MS.gene058766.t1 | AT1G49480 | 36.296 | 135 | 74 | 4 | 133 | 261 | 98 | 226 | 5.95e-16 | 75.1 |
| MS.gene058766.t1 | AT1G49480 | 36.296 | 135 | 74 | 4 | 133 | 261 | 98 | 226 | 5.95e-16 | 75.1 |
| MS.gene058766.t1 | AT1G49480 | 36.296 | 135 | 74 | 4 | 133 | 261 | 98 | 226 | 5.95e-16 | 75.1 |
Find 39 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATTTCCCATTAGAATTT+TGG | 0.142530 | 3.1:+729372 | None:intergenic |
| AATGCTCTCCCTCAGAATTT+TGG | 0.165314 | 3.1:+729212 | None:intergenic |
| AAGTGAGAGTCATGAGAAAA+AGG | 0.253305 | 3.1:-729476 | MS.gene058766:CDS |
| TTTGCAGAATACTATTCTAT+AGG | 0.313465 | 3.1:-729664 | MS.gene058766:CDS |
| CATTGCAGATGATGATGATT+TGG | 0.324669 | 3.1:+729162 | None:intergenic |
| TTGCAGAATACTATTCTATA+GGG | 0.341018 | 3.1:-729663 | MS.gene058766:CDS |
| GTCAGCCCTCCTCTAAAATT+TGG | 0.348157 | 3.1:-729864 | MS.gene058766:CDS |
| AGGGGCAACAATCTGTCTTA+TGG | 0.381060 | 3.1:-729109 | MS.gene058766:CDS |
| TTCCTGTGTTTCAAATATGA+AGG | 0.394296 | 3.1:-729631 | MS.gene058766:CDS |
| TTCAAAACTCTAAGTACAAA+TGG | 0.425055 | 3.1:-729550 | MS.gene058766:CDS |
| GGGATTTACTATATTTCAAA+GGG | 0.437078 | 3.1:-729128 | MS.gene058766:CDS |
| AAATTCTGAGGGAGAGCATT+GGG | 0.443772 | 3.1:-729209 | MS.gene058766:CDS |
| CTGTTCCTGATGGTCGTGAT+TGG | 0.459514 | 3.1:-729744 | MS.gene058766:CDS |
| CAGTTCATCCGTTATAGTAT+AGG | 0.459617 | 3.1:+729840 | None:intergenic |
| ACTCTCACTTGTTTCAACCT+TGG | 0.466400 | 3.1:+729489 | None:intergenic |
| CATCTGCAATGATAATATCA+AGG | 0.473557 | 3.1:-729150 | MS.gene058766:CDS |
| GGGGATTTACTATATTTCAA+AGG | 0.484674 | 3.1:-729129 | MS.gene058766:CDS |
| ATTTCCCAATCACGACCATC+AGG | 0.484720 | 3.1:+729739 | None:intergenic |
| AGTGTCATAGTCGTAGAAAA+AGG | 0.486595 | 3.1:-729513 | MS.gene058766:CDS |
| TGATGGTCGTGATTGGGAAA+TGG | 0.490310 | 3.1:-729737 | MS.gene058766:CDS |
| TGTTCCTGATGGTCGTGATT+GGG | 0.496959 | 3.1:-729743 | MS.gene058766:CDS |
| AATTCTAATGGGAAATTATG+TGG | 0.499901 | 3.1:-729368 | MS.gene058766:intron |
| CCCCTTCATATTTGAAACAC+AGG | 0.508323 | 3.1:+729629 | None:intergenic |
| GAATACTATTCTATAGGGTA+TGG | 0.523564 | 3.1:-729658 | MS.gene058766:CDS |
| AAAATTCTGAGGGAGAGCAT+TGG | 0.523796 | 3.1:-729210 | MS.gene058766:CDS |
| TCCTGTGTTTCAAATATGAA+GGG | 0.529278 | 3.1:-729630 | MS.gene058766:CDS |
| AATTTGGTCCTATACTATAA+CGG | 0.531388 | 3.1:-729848 | MS.gene058766:CDS |
| AATGTGCAGTATGTTAATGC+TGG | 0.551027 | 3.1:-729277 | MS.gene058766:intron |
| ATCTGCAATGATAATATCAA+GGG | 0.551519 | 3.1:-729149 | MS.gene058766:CDS |
| CCTGTGTTTCAAATATGAAG+GGG | 0.591078 | 3.1:-729629 | MS.gene058766:CDS |
| TGAGCTGATCAATAAGAAGC+CGG | 0.592920 | 3.1:-729071 | MS.gene058766:CDS |
| TGTAAAGCTCCAAAATTCTG+AGG | 0.595481 | 3.1:-729221 | MS.gene058766:CDS |
| ACATGCTTCTGAAAGAGCAA+AGG | 0.603971 | 3.1:-729437 | MS.gene058766:CDS |
| GTAAAGCTCCAAAATTCTGA+GGG | 0.614548 | 3.1:-729220 | MS.gene058766:CDS |
| TTCATATTTGAAACACAGGA+AGG | 0.623348 | 3.1:+729633 | None:intergenic |
| GCTACAATTACTGTTCCTGA+TGG | 0.638622 | 3.1:-729754 | MS.gene058766:CDS |
| GAAATGGAACTGAAGAAATG+CGG | 0.682734 | 3.1:-729721 | MS.gene058766:CDS |
| TCTGCAATGATAATATCAAG+GGG | 0.693916 | 3.1:-729148 | MS.gene058766:CDS |
| GGATTTACTATATTTCAAAG+GGG | 0.704196 | 3.1:-729127 | MS.gene058766:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGAGTTTATAAAAAGATT+TGG | - | chr3.1:729096-729115 | MS.gene058766:CDS | 20.0% |
| !!! | AATCTTTTTATAAACTCATC+TGG | + | chr3.1:729096-729115 | None:intergenic | 20.0% |
| !!! | ACATTTACTTTTGTAACAAA+TGG | - | chr3.1:729199-729218 | MS.gene058766:CDS | 20.0% |
| !!! | AGAATTTTGGAACAAAAATA+AGG | + | chr3.1:729510-729529 | None:intergenic | 20.0% |
| !!! | ATAATTTCCCATTAGAATTT+TGG | + | chr3.1:729523-729542 | None:intergenic | 20.0% |
| !!! | GAATTTTGGAACAAAAATAA+GGG | + | chr3.1:729509-729528 | None:intergenic | 20.0% |
| !!! | GTTTTTTGGATTAAATTCTT+TGG | + | chr3.1:729487-729506 | None:intergenic | 20.0% |
| !!! | TTTTGTTCCAAAATTCTAAT+GGG | - | chr3.1:729513-729532 | MS.gene058766:CDS | 20.0% |
| !!! | TTTTTGTTCCAAAATTCTAA+TGG | - | chr3.1:729512-729531 | MS.gene058766:CDS | 20.0% |
| ! | AATTCTAATGGGAAATTATG+TGG | - | chr3.1:729524-729543 | MS.gene058766:CDS | 25.0% |
| ! | AATTTGGTCCTATACTATAA+CGG | - | chr3.1:729044-729063 | MS.gene058766:CDS | 25.0% |
| ! | ATCTGCAATGATAATATCAA+GGG | - | chr3.1:729743-729762 | MS.gene058766:CDS | 25.0% |
| ! | GGATTTACTATATTTCAAAG+GGG | - | chr3.1:729765-729784 | MS.gene058766:CDS | 25.0% |
| ! | GGGATTTACTATATTTCAAA+GGG | - | chr3.1:729764-729783 | MS.gene058766:CDS | 25.0% |
| ! | TTCAAAACTCTAAGTACAAA+TGG | - | chr3.1:729342-729361 | MS.gene058766:intron | 25.0% |
| ! | TTGCAGAATACTATTCTATA+GGG | - | chr3.1:729229-729248 | MS.gene058766:CDS | 25.0% |
| ! | TTTGCAGAATACTATTCTAT+AGG | - | chr3.1:729228-729247 | MS.gene058766:CDS | 25.0% |
| !!! | GAACAAAAATAAGGGTTTTT+TGG | + | chr3.1:729501-729520 | None:intergenic | 25.0% |
| !!! | TTTGTACTTAGAGTTTTGAA+TGG | + | chr3.1:729342-729361 | None:intergenic | 25.0% |
| CATCTGCAATGATAATATCA+AGG | - | chr3.1:729742-729761 | MS.gene058766:CDS | 30.0% | |
| GAATACTATTCTATAGGGTA+TGG | - | chr3.1:729234-729253 | MS.gene058766:CDS | 30.0% | |
| GGGGATTTACTATATTTCAA+AGG | - | chr3.1:729763-729782 | MS.gene058766:CDS | 30.0% | |
| TCCTGTGTTTCAAATATGAA+GGG | - | chr3.1:729262-729281 | MS.gene058766:CDS | 30.0% | |
| TCTGCAATGATAATATCAAG+GGG | - | chr3.1:729744-729763 | MS.gene058766:CDS | 30.0% | |
| TTCCTGTGTTTCAAATATGA+AGG | - | chr3.1:729261-729280 | MS.gene058766:CDS | 30.0% | |
| ! | AGTATAGGACCAAATTTTAG+AGG | + | chr3.1:729040-729059 | None:intergenic | 30.0% |
| ! | TTCATATTTGAAACACAGGA+AGG | + | chr3.1:729262-729281 | None:intergenic | 30.0% |
| AAGTGAGAGTCATGAGAAAA+AGG | - | chr3.1:729416-729435 | MS.gene058766:CDS | 35.0% | |
| AATGTGCAGTATGTTAATGC+TGG | - | chr3.1:729615-729634 | MS.gene058766:CDS | 35.0% | |
| AGTGAGAGTCATGAGAAAAA+GGG | - | chr3.1:729417-729436 | MS.gene058766:CDS | 35.0% | |
| AGTGTCATAGTCGTAGAAAA+AGG | - | chr3.1:729379-729398 | MS.gene058766:CDS | 35.0% | |
| CAGTTCATCCGTTATAGTAT+AGG | + | chr3.1:729055-729074 | None:intergenic | 35.0% | |
| CCTGTGTTTCAAATATGAAG+GGG | - | chr3.1:729263-729282 | MS.gene058766:CDS | 35.0% | |
| GAAATGGAACTGAAGAAATG+CGG | - | chr3.1:729171-729190 | MS.gene058766:CDS | 35.0% | |
| GTAAAGCTCCAAAATTCTGA+GGG | - | chr3.1:729672-729691 | MS.gene058766:CDS | 35.0% | |
| TAATGGGAAATTATGTGGTG+AGG | - | chr3.1:729529-729548 | MS.gene058766:CDS | 35.0% | |
| TGTAAAGCTCCAAAATTCTG+AGG | - | chr3.1:729671-729690 | MS.gene058766:CDS | 35.0% | |
| ! | ATTGTGACTTTTAGCACATC+CGG | + | chr3.1:729843-729862 | None:intergenic | 35.0% |
| ! | CATTGCAGATGATGATGATT+TGG | + | chr3.1:729733-729752 | None:intergenic | 35.0% |
| !! | ATAGGACCAAATTTTAGAGG+AGG | + | chr3.1:729037-729056 | None:intergenic | 35.0% |
| !! | TAGGACCAAATTTTAGAGGA+GGG | + | chr3.1:729036-729055 | None:intergenic | 35.0% |
| !!! | TCAGAATTTTGGAGCTTTAC+AGG | + | chr3.1:729672-729691 | None:intergenic | 35.0% |
| ACTCTCACTTGTTTCAACCT+TGG | + | chr3.1:729406-729425 | None:intergenic | 40.0% | |
| GCTACAATTACTGTTCCTGA+TGG | - | chr3.1:729138-729157 | MS.gene058766:CDS | 40.0% | |
| TAGTCGTAGAAAAAGGTCCA+AGG | - | chr3.1:729386-729405 | MS.gene058766:CDS | 40.0% | |
| TGAGCTGATCAATAAGAAGC+CGG | - | chr3.1:729821-729840 | MS.gene058766:CDS | 40.0% | |
| ! | AAAATTCTGAGGGAGAGCAT+TGG | - | chr3.1:729682-729701 | MS.gene058766:CDS | 40.0% |
| ! | AATGCTCTCCCTCAGAATTT+TGG | + | chr3.1:729683-729702 | None:intergenic | 40.0% |
| ! | ACATGCTTCTGAAAGAGCAA+AGG | - | chr3.1:729455-729474 | MS.gene058766:CDS | 40.0% |
| ! | CCCCTTCATATTTGAAACAC+AGG | + | chr3.1:729266-729285 | None:intergenic | 40.0% |
| !! | AAATTCTGAGGGAGAGCATT+GGG | - | chr3.1:729683-729702 | MS.gene058766:CDS | 40.0% |
| AGGGGCAACAATCTGTCTTA+TGG | - | chr3.1:729783-729802 | MS.gene058766:CDS | 45.0% | |
| ATTTCCCAATCACGACCATC+AGG | + | chr3.1:729156-729175 | None:intergenic | 45.0% | |
| TGATGGTCGTGATTGGGAAA+TGG | - | chr3.1:729155-729174 | MS.gene058766:CDS | 45.0% | |
| TGTTCCTGATGGTCGTGATT+GGG | - | chr3.1:729149-729168 | MS.gene058766:CDS | 45.0% | |
| !! | GTCAGCCCTCCTCTAAAATT+TGG | - | chr3.1:729028-729047 | MS.gene058766:CDS | 45.0% |
| CTGTTCCTGATGGTCGTGAT+TGG | - | chr3.1:729148-729167 | MS.gene058766:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 729024 | 729890 | 729024 | ID=MS.gene058766 |
| chr3.1 | mRNA | 729024 | 729890 | 729024 | ID=MS.gene058766.t1;Parent=MS.gene058766 |
| chr3.1 | exon | 729369 | 729890 | 729369 | ID=MS.gene058766.t1.exon1;Parent=MS.gene058766.t1 |
| chr3.1 | CDS | 729369 | 729890 | 729369 | ID=cds.MS.gene058766.t1;Parent=MS.gene058766.t1 |
| chr3.1 | exon | 729024 | 729290 | 729024 | ID=MS.gene058766.t1.exon2;Parent=MS.gene058766.t1 |
| chr3.1 | CDS | 729024 | 729290 | 729024 | ID=cds.MS.gene058766.t1;Parent=MS.gene058766.t1 |
| Gene Sequence |
| Protein sequence |
