AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058871

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058871.t1 MTR_6g051425 30.182 275 175 6 50 311 19 289 3.08e-35 137
MS.gene058871.t1 MTR_0856s0010 42.775 173 85 4 2 173 1 160 2.12e-33 126
MS.gene058871.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 5.10e-24 108
MS.gene058871.t1 MTR_0558s0020 25.260 289 182 8 30 284 8 296 8.97e-22 97.1
MS.gene058871.t1 MTR_1g070355 28.936 235 152 7 54 278 80 309 1.34e-20 97.1
MS.gene058871.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 6.19e-20 87.0
MS.gene058871.t1 MTR_8g446020 24.576 236 157 4 52 284 39 256 1.87e-17 83.2
MS.gene058871.t1 MTR_3g450850 27.046 281 186 8 8 272 9 286 2.10e-17 85.1
MS.gene058871.t1 MTR_7g446480 31.977 172 116 1 122 292 143 314 4.67e-17 83.6
MS.gene058871.t1 MTR_6g022070 28.966 145 99 1 338 482 1 141 5.13e-17 83.6
MS.gene058871.t1 MTR_1g008290 32.331 133 88 1 108 240 14 144 9.45e-17 78.2
MS.gene058871.t1 MTR_7g446510 32.530 166 111 1 128 292 164 329 1.79e-16 82.0
MS.gene058871.t1 MTR_7g446520 25.847 236 162 2 52 286 92 315 2.20e-16 81.6
MS.gene058871.t1 MTR_7g115320 61.111 54 18 1 137 190 9 59 8.33e-15 70.9
MS.gene058871.t1 MTR_1g083640 23.162 272 175 8 18 255 11 282 2.54e-14 74.7
MS.gene058871.t1 MTR_1g019850 30.303 165 98 6 17 175 43 196 3.46e-14 73.2
MS.gene058871.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.36e-13 67.4
MS.gene058871.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 2.96e-13 67.0
MS.gene058871.t1 MTR_5g076070 23.552 259 185 7 23 272 28 282 3.13e-13 71.2
MS.gene058871.t1 MTR_6g090505 25.843 178 129 2 109 283 53 230 2.10e-12 70.1
MS.gene058871.t1 MTR_0402s0040 25.000 180 130 3 47 221 25 204 4.23e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058871.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.95e-123 390
MS.gene058871.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.95e-123 390
MS.gene058871.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.95e-123 390
MS.gene058871.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.95e-123 390
MS.gene058871.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.95e-123 390
MS.gene058871.t1 AT4G38180 32.720 706 428 15 8 684 38 725 9.86e-120 379
MS.gene058871.t1 AT3G22170 32.258 651 382 11 18 643 35 651 3.93e-111 358
MS.gene058871.t1 AT3G22170 32.258 651 382 11 18 643 35 651 3.93e-111 358
MS.gene058871.t1 AT1G76320 32.198 587 374 9 52 633 1 568 3.17e-105 338
MS.gene058871.t1 AT1G76320 32.198 587 374 9 52 633 1 568 7.02e-105 338
MS.gene058871.t1 AT1G76320 32.198 587 374 9 52 633 1 568 8.19e-105 338
MS.gene058871.t1 AT1G76320 32.198 587 374 9 52 633 1 568 8.19e-105 338
MS.gene058871.t1 AT1G52520 32.538 587 371 12 33 607 66 639 2.62e-104 336
MS.gene058871.t1 AT2G27110 31.803 610 363 14 48 645 49 617 9.53e-94 312
MS.gene058871.t1 AT2G27110 31.803 610 363 14 48 645 49 617 9.53e-94 312
MS.gene058871.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.05e-92 307
MS.gene058871.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.05e-92 307
MS.gene058871.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.05e-92 307
MS.gene058871.t1 AT1G80010 32.392 602 359 13 39 610 82 665 1.01e-90 301
MS.gene058871.t1 AT2G27110 34.937 478 288 9 172 645 14 472 5.29e-89 295
MS.gene058871.t1 AT5G18960 32.060 602 354 16 28 622 192 745 4.53e-86 290
MS.gene058871.t1 AT5G18960 32.060 602 354 16 28 622 192 745 4.53e-86 290
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 135 564 4.01e-82 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 135 564 4.71e-82 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.13e-82 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 8.93e-82 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 8.93e-82 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.00e-81 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.00e-81 278
MS.gene058871.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.00e-81 278
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.79e-79 271
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.79e-79 271
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.24e-79 271
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.39e-79 271
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.39e-79 271
MS.gene058871.t1 AT4G19990 30.198 606 353 12 51 632 38 597 3.96e-79 270
MS.gene058871.t1 AT4G38170 34.021 388 245 4 221 606 21 399 2.68e-76 257
MS.gene058871.t1 AT4G19990 30.983 539 318 10 104 632 32 526 3.19e-75 258
MS.gene058871.t1 AT1G10240 27.055 584 383 15 42 603 42 604 4.10e-63 224
MS.gene058871.t1 AT1G10240 27.055 584 383 15 42 603 42 604 4.10e-63 224
MS.gene058871.t1 AT5G28530 27.946 594 364 13 46 603 53 618 8.65e-62 221
MS.gene058871.t1 AT5G28530 27.441 594 363 12 46 603 53 614 7.07e-61 218
MS.gene058871.t1 AT5G28530 27.441 594 363 12 46 603 53 614 7.07e-61 218
MS.gene058871.t1 AT5G28530 26.829 328 202 7 290 603 252 555 1.23e-27 119
MS.gene058871.t1 AT5G28530 28.324 173 107 5 46 205 53 221 8.30e-11 65.9
MS.gene058871.t1 AT5G28530 25.915 328 201 6 290 603 252 551 6.93e-27 117
MS.gene058871.t1 AT5G28530 28.324 173 107 5 46 205 53 221 8.19e-11 65.9

Find 156 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 6.2:+39403588 MS.gene058871:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 6.2:-39404750 None:intergenic
CACTTATGCTCGATGGTTGA+TGG 0.299906 6.2:+39403501 None:intergenic
GATTGCAAACCCTTGTTTCA+TGG 0.302647 6.2:-39403715 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 6.2:-39404396 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 6.2:+39403589 MS.gene058871:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 6.2:+39404520 MS.gene058871:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 6.2:+39403886 MS.gene058871:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 6.2:+39403581 MS.gene058871:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 6.2:+39404353 MS.gene058871:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 6.2:+39403954 MS.gene058871:CDS
AGTATTGTGTTGATTTCAAC+GGG 0.389824 6.2:+39405164 MS.gene058871:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 6.2:-39404551 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 6.2:+39405018 MS.gene058871:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 6.2:-39405586 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 6.2:+39404558 MS.gene058871:CDS
ACTTCGACAACCGAAACAAT+TGG 0.413255 6.2:-39405706 None:intergenic
AAAGGATGATCGATCAATAT+AGG 0.415391 6.2:-39403528 None:intergenic
ATTGTGTGTATGATTCTCTT+CGG 0.417625 6.2:+39404654 MS.gene058871:CDS
TTGTGTGTATGATTCTCTTC+GGG 0.423647 6.2:+39404655 MS.gene058871:CDS
ACATTACTTCCTATGTCTGA+TGG 0.423977 6.2:+39405838 MS.gene058871:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 6.2:-39404807 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 6.2:-39404364 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 6.2:-39403812 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 6.2:-39404356 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 6.2:-39403951 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 6.2:+39404720 MS.gene058871:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 6.2:+39405839 MS.gene058871:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 6.2:-39404365 None:intergenic
CCATCAGCTAGCTCTCCGTC+AGG 0.451558 6.2:-39403558 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 6.2:-39405151 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 6.2:+39404465 MS.gene058871:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 6.2:+39404177 MS.gene058871:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 6.2:+39403738 MS.gene058871:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 6.2:+39403739 MS.gene058871:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 6.2:+39404913 MS.gene058871:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 6.2:+39405483 MS.gene058871:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 6.2:+39404540 MS.gene058871:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 6.2:+39404128 MS.gene058871:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 6.2:+39403878 MS.gene058871:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 6.2:-39404291 None:intergenic
CCACACATAGAAAGATTTGA+AGG 0.478166 6.2:+39405379 MS.gene058871:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 6.2:+39405522 MS.gene058871:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 6.2:-39403849 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 6.2:+39404147 MS.gene058871:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 6.2:-39403607 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 6.2:-39404990 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 6.2:-39403613 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 6.2:-39403704 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 6.2:-39405899 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 6.2:+39405606 MS.gene058871:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 6.2:-39405119 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 6.2:+39403705 MS.gene058871:CDS
TGTATGAAGAAATGATCAAA+TGG 0.501577 6.2:+39405467 MS.gene058871:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 6.2:-39403654 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 6.2:+39404754 MS.gene058871:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 6.2:-39403831 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 6.2:-39405014 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 6.2:-39404142 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 6.2:+39404444 MS.gene058871:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 6.2:+39405264 MS.gene058871:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 6.2:+39404475 MS.gene058871:CDS
TCGGTTACAATTCCCATTGG+AGG 0.511504 6.2:-39404488 None:intergenic
TTACGAAAATCTAACATTTG+TGG 0.512305 6.2:+39404082 MS.gene058871:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 6.2:+39404019 MS.gene058871:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 6.2:+39404056 MS.gene058871:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 6.2:+39404106 MS.gene058871:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 6.2:+39404264 MS.gene058871:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 6.2:+39404129 MS.gene058871:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 6.2:-39405024 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 6.2:-39405379 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 6.2:+39403879 MS.gene058871:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 6.2:-39404180 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 6.2:+39405484 MS.gene058871:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 6.2:+39404043 MS.gene058871:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 6.2:-39403828 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 6.2:+39404018 MS.gene058871:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 6.2:+39405163 MS.gene058871:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 6.2:-39405900 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 6.2:+39404178 MS.gene058871:CDS
CGCAACCTAGTAAAATGGAT+TGG 0.539669 6.2:-39404391 None:intergenic
TGATCGGTTACAATTCCCAT+TGG 0.541217 6.2:-39404491 None:intergenic
CATCAGCTAGCTCTCCGTCA+GGG 0.541329 6.2:-39403557 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.542180 6.2:+39404368 MS.gene058871:CDS
CTGCATAGCCTTGCACTGAT+CGG 0.542185 6.2:-39404507 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 6.2:+39404220 MS.gene058871:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 6.2:+39403863 MS.gene058871:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 6.2:+39403642 MS.gene058871:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 6.2:+39405211 MS.gene058871:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 6.2:-39405023 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 6.2:+39403786 MS.gene058871:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 6.2:+39404284 MS.gene058871:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 6.2:+39404137 MS.gene058871:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 6.2:+39405520 MS.gene058871:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 6.2:+39405517 MS.gene058871:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 6.2:-39404441 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 6.2:+39403747 MS.gene058871:CDS
TCTGATGGGTTTGAAGCGTC+CGG 0.561930 6.2:+39405853 MS.gene058871:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.562336 6.2:+39405521 MS.gene058871:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 6.2:+39405293 MS.gene058871:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 6.2:+39405040 MS.gene058871:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 6.2:-39404435 None:intergenic
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 6.2:+39404476 MS.gene058871:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 6.2:+39404546 MS.gene058871:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 6.2:+39405078 MS.gene058871:CDS
ATCAGCTAGCTCTCCGTCAG+GGG 0.582853 6.2:-39403556 None:intergenic
TCAGACATAGGAAGTAATGT+AGG 0.589454 6.2:-39405835 None:intergenic
GCTTCAAACCCATCAGACAT+AGG 0.589923 6.2:-39405847 None:intergenic
CATTTCTTCATACAAATCAG+AGG 0.596809 6.2:-39405458 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 6.2:+39403706 MS.gene058871:CDS
AAGATACCAAGTCCTTTACC+TGG 0.605756 6.2:+39404429 MS.gene058871:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 6.2:-39405872 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 6.2:+39404904 MS.gene058871:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 6.2:+39405041 MS.gene058871:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 6.2:+39404133 MS.gene058871:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 6.2:-39405634 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 6.2:+39405933 MS.gene058871:CDS
ACCACCGGCATCACATACCA+TGG 0.613048 6.2:-39404060 None:intergenic
AAATGCAACTGTTATCTCGA+AGG 0.615193 6.2:+39405064 MS.gene058871:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 6.2:+39404549 MS.gene058871:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 6.2:+39404960 MS.gene058871:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 6.2:+39404450 MS.gene058871:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 6.2:-39405289 None:intergenic
AATTGTAACCGATCAGTGCA+AGG 0.620761 6.2:+39404499 MS.gene058871:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 6.2:+39404148 MS.gene058871:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 6.2:+39405895 MS.gene058871:CDS
CCTGACGGAGAGCTAGCTGA+TGG 0.623440 6.2:+39403558 MS.gene058871:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 6.2:+39405607 MS.gene058871:CDS
CGGCATCACATACCATGGAA+CGG 0.625469 6.2:-39404055 None:intergenic
TAGCCATGTTTCGAACAACC+AGG 0.627145 6.2:-39404447 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 6.2:-39404974 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 6.2:-39405619 None:intergenic
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 6.2:+39404143 MS.gene058871:CDS
TTTACAGCCACATTGTGGTG+TGG 0.632168 6.2:+39405516 MS.gene058871:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 6.2:+39403740 MS.gene058871:CDS
GGATCATAGCTTAAAGACGA+TGG 0.633198 6.2:+39405543 MS.gene058871:CDS
ATGAGTTTACAGCCACATTG+TGG 0.634509 6.2:+39405511 MS.gene058871:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 6.2:+39404611 MS.gene058871:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 6.2:+39404922 MS.gene058871:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 6.2:-39403525 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 6.2:-39405448 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 6.2:+39403943 MS.gene058871:CDS
TCAGCTAGCTCTCCGTCAGG+GGG 0.662037 6.2:-39403555 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 6.2:+39405417 MS.gene058871:CDS
CGGAGAGCTAGCTGATGGTG+CGG 0.662675 6.2:+39403563 MS.gene058871:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 6.2:-39404363 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 6.2:+39405124 MS.gene058871:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 6.2:+39405629 MS.gene058871:CDS
TCATAGCTTAAAGACGATGG+AGG 0.690980 6.2:+39405546 MS.gene058871:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 6.2:-39404327 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 6.2:+39404959 MS.gene058871:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 6.2:-39405523 None:intergenic
TCCATGGTATGTGATGCCGG+TGG 0.764195 6.2:+39404059 MS.gene058871:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 6.2:+39404807 MS.gene058871:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 6.2:+39403985 MS.gene058871:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 6.2:+39405165 MS.gene058871:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG + chr6.2:39404784-39404803 MS.gene058871:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG - chr6.2:39404782-39404801 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG - chr6.2:39405745-39405764 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG + chr6.2:39404783-39404802 MS.gene058871:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG + chr6.2:39405696-39405715 MS.gene058871:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG + chr6.2:39404701-39404720 MS.gene058871:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG + chr6.2:39404706-39404725 MS.gene058871:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG + chr6.2:39404707-39404726 MS.gene058871:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG + chr6.2:39404593-39404612 MS.gene058871:CDS 25.0%
! TGTATGAAGAAATGATCAAA+TGG + chr6.2:39405467-39405486 MS.gene058871:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG + chr6.2:39404082-39404101 MS.gene058871:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG + chr6.2:39403738-39403757 MS.gene058871:CDS 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG + chr6.2:39403739-39403758 MS.gene058871:CDS 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG + chr6.2:39403659-39403678 MS.gene058871:CDS 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG + chr6.2:39405163-39405182 MS.gene058871:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG - chr6.2:39405598-39405617 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG - chr6.2:39403766-39403785 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG - chr6.2:39405662-39405681 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG - chr6.2:39403531-39403550 None:intergenic 30.0%
ACACAATACTTAGTTTCGTT+CGG - chr6.2:39405154-39405173 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG + chr6.2:39403943-39403962 MS.gene058871:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG + chr6.2:39405041-39405060 MS.gene058871:CDS 30.0%
ATTGTGTGTATGATTCTCTT+CGG + chr6.2:39404654-39404673 MS.gene058871:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG - chr6.2:39405461-39405480 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG - chr6.2:39405026-39405045 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG - chr6.2:39403657-39403676 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG + chr6.2:39405417-39405436 MS.gene058871:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG - chr6.2:39404294-39404313 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG + chr6.2:39403740-39403759 MS.gene058871:CDS 30.0%
! CTTTTTCTATGAGATTGACA+TGG + chr6.2:39404214-39404233 MS.gene058871:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG + chr6.2:39404247-39404266 MS.gene058871:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG - chr6.2:39404603-39404622 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG + chr6.2:39404788-39404807 MS.gene058871:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG + chr6.2:39404246-39404265 MS.gene058871:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG + chr6.2:39405164-39405183 MS.gene058871:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG + chr6.2:39403879-39403898 MS.gene058871:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG + chr6.2:39404007-39404026 MS.gene058871:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG + chr6.2:39404836-39404855 MS.gene058871:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG - chr6.2:39405368-39405387 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG - chr6.2:39405902-39405921 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG + chr6.2:39404611-39404630 MS.gene058871:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG + chr6.2:39405064-39405083 MS.gene058871:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG + chr6.2:39405484-39405503 MS.gene058871:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG + chr6.2:39405838-39405857 MS.gene058871:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG + chr6.2:39404540-39404559 MS.gene058871:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG - chr6.2:39404330-39404349 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG + chr6.2:39404178-39404197 MS.gene058871:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG + chr6.2:39405839-39405858 MS.gene058871:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG + chr6.2:39405379-39405398 MS.gene058871:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG - chr6.2:39405382-39405401 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG - chr6.2:39405292-39405311 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG + chr6.2:39405293-39405312 MS.gene058871:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG - chr6.2:39403707-39403726 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG + chr6.2:39405040-39405059 MS.gene058871:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG + chr6.2:39403642-39403661 MS.gene058871:CDS 35.0%
GGATTAAGAATTGGTTGATC+AGG - chr6.2:39405589-39405608 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG - chr6.2:39405027-39405046 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG + chr6.2:39403706-39403725 MS.gene058871:CDS 35.0%
TAAAACCACTAGTTGACTGT+TGG - chr6.2:39405903-39405922 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG - chr6.2:39405451-39405470 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG + chr6.2:39404177-39404196 MS.gene058871:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG - chr6.2:39405838-39405857 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG - chr6.2:39404368-39404387 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG + chr6.2:39403863-39403882 MS.gene058871:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG + chr6.2:39404546-39404565 MS.gene058871:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG - chr6.2:39404993-39405012 None:intergenic 35.0%
TTGTGTGTATGATTCTCTTC+GGG + chr6.2:39404655-39404674 MS.gene058871:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG + chr6.2:39405108-39405127 MS.gene058871:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG + chr6.2:39404720-39404739 MS.gene058871:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG + chr6.2:39403786-39403805 MS.gene058871:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG + chr6.2:39404392-39404411 MS.gene058871:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG - chr6.2:39405122-39405141 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG + chr6.2:39404744-39404763 MS.gene058871:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG - chr6.2:39404078-39404097 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG - chr6.2:39405310-39405329 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG - chr6.2:39403815-39403834 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG - chr6.2:39405659-39405678 None:intergenic 35.0%
!! AGACATGCACTTTTTGTACT+TGG + chr6.2:39405244-39405263 MS.gene058871:CDS 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG - chr6.2:39403610-39403629 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG + chr6.2:39404011-39404030 MS.gene058871:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG - chr6.2:39403616-39403635 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG + chr6.2:39403878-39403897 MS.gene058871:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG + chr6.2:39405165-39405184 MS.gene058871:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG + chr6.2:39403886-39403905 MS.gene058871:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG + chr6.2:39404368-39404387 MS.gene058871:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG + chr6.2:39404675-39404694 MS.gene058871:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG + chr6.2:39404678-39404697 MS.gene058871:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG - chr6.2:39404399-39404418 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG + chr6.2:39404429-39404448 MS.gene058871:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG + chr6.2:39404499-39404518 MS.gene058871:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG + chr6.2:39403954-39403973 MS.gene058871:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG - chr6.2:39405709-39405728 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG + chr6.2:39403985-39404004 MS.gene058871:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG + chr6.2:39404284-39404303 MS.gene058871:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG - chr6.2:39405017-39405036 None:intergenic 40.0%
ATGAGTTTACAGCCACATTG+TGG + chr6.2:39405511-39405530 MS.gene058871:CDS 40.0%
ATGATTGACACCAACAAACG+GGG - chr6.2:39404366-39404385 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG + chr6.2:39404129-39404148 MS.gene058871:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG + chr6.2:39405483-39405502 MS.gene058871:CDS 40.0%
CGCAACCTAGTAAAATGGAT+TGG - chr6.2:39404394-39404413 None:intergenic 40.0%
CGTGAATATGCCATGAAACA+AGG + chr6.2:39403705-39403724 MS.gene058871:CDS 40.0%
GAACAAAAGTTTCCGTTCCA+TGG + chr6.2:39404043-39404062 MS.gene058871:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG - chr6.2:39405875-39405894 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG + chr6.2:39404106-39404125 MS.gene058871:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG - chr6.2:39403852-39403871 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG - chr6.2:39404367-39404386 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG + chr6.2:39404128-39404147 MS.gene058871:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG - chr6.2:39403954-39403973 None:intergenic 40.0%
GGATCATAGCTTAAAGACGA+TGG + chr6.2:39405543-39405562 MS.gene058871:CDS 40.0%
GGATGATCGATCAATATAGG+AGG - chr6.2:39403528-39403547 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG + chr6.2:39405018-39405037 MS.gene058871:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG - chr6.2:39403834-39403853 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG + chr6.2:39404959-39404978 MS.gene058871:CDS 40.0%
TCATAGCTTAAAGACGATGG+AGG + chr6.2:39405546-39405565 MS.gene058871:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG - chr6.2:39404494-39404513 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG + chr6.2:39405933-39405952 MS.gene058871:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG + chr6.2:39405264-39405283 MS.gene058871:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG - chr6.2:39404444-39404463 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG + chr6.2:39404444-39404463 MS.gene058871:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG - chr6.2:39404183-39404202 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG + chr6.2:39404549-39404568 MS.gene058871:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG + chr6.2:39405713-39405732 MS.gene058871:intron 40.0%
! AGGAATACGAGGCAGATTTT+CGG + chr6.2:39404933-39404952 MS.gene058871:CDS 40.0%
! CATGGCCAATCCATTTTACT+AGG + chr6.2:39404386-39404405 MS.gene058871:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG - chr6.2:39405610-39405629 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG + chr6.2:39404745-39404764 MS.gene058871:CDS 40.0%
! GATTGCAAACCCTTGTTTCA+TGG - chr6.2:39403718-39403737 None:intergenic 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG - chr6.2:39404919-39404938 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG + chr6.2:39405607-39405626 MS.gene058871:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG + chr6.2:39405606-39405625 MS.gene058871:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG + chr6.2:39405211-39405230 MS.gene058871:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG + chr6.2:39405124-39405143 MS.gene058871:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG + chr6.2:39404674-39404693 MS.gene058871:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG + chr6.2:39404913-39404932 MS.gene058871:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG - chr6.2:39404977-39404996 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG + chr6.2:39404960-39404979 MS.gene058871:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG + chr6.2:39404922-39404941 MS.gene058871:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG - chr6.2:39404554-39404573 None:intergenic 45.0%
CATCCTTTATTACCCCCTGA+CGG + chr6.2:39403543-39403562 MS.gene058871:CDS 45.0%
CTATGAGATTGACATGGACG+AGG + chr6.2:39404220-39404239 MS.gene058871:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG - chr6.2:39404438-39404457 None:intergenic 45.0%
GCTTCAAACCCATCAGACAT+AGG - chr6.2:39405850-39405869 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG - chr6.2:39403831-39403850 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG + chr6.2:39404520-39404539 MS.gene058871:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG + chr6.2:39404450-39404469 MS.gene058871:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG + chr6.2:39404018-39404037 MS.gene058871:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG - chr6.2:39404450-39404469 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG + chr6.2:39405895-39405914 MS.gene058871:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG - chr6.2:39404491-39404510 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG - chr6.2:39404753-39404772 None:intergenic 45.0%
TTACAGCCACATTGTGGTGT+GGG + chr6.2:39405517-39405536 MS.gene058871:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG + chr6.2:39405516-39405535 MS.gene058871:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG + chr6.2:39404754-39404773 MS.gene058871:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG - chr6.2:39404810-39404829 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG + chr6.2:39405078-39405097 MS.gene058871:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG + chr6.2:39404753-39404772 MS.gene058871:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG + chr6.2:39404019-39404038 MS.gene058871:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG - chr6.2:39404359-39404378 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG + chr6.2:39404133-39404152 MS.gene058871:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG + chr6.2:39404476-39404495 MS.gene058871:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG + chr6.2:39404807-39404826 MS.gene058871:CDS 50.0%
CGGCATCACATACCATGGAA+CGG - chr6.2:39404058-39404077 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG + chr6.2:39404056-39404075 MS.gene058871:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG + chr6.2:39404558-39404577 MS.gene058871:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG + chr6.2:39405629-39405648 MS.gene058871:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG + chr6.2:39404465-39404484 MS.gene058871:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG + chr6.2:39404475-39404494 MS.gene058871:CDS 50.0%
TCTCCGTCAGGGGGTAATAA+AGG - chr6.2:39403549-39403568 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG + chr6.2:39403747-39403766 MS.gene058871:CDS 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG + chr6.2:39404353-39404372 MS.gene058871:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG + chr6.2:39403588-39403607 MS.gene058871:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG - chr6.2:39404510-39404529 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG - chr6.2:39405637-39405656 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG + chr6.2:39403589-39403608 MS.gene058871:CDS 50.0%
!! TCTGATGGGTTTGAAGCGTC+CGG + chr6.2:39405853-39405872 MS.gene058871:CDS 50.0%
ACCACCGGCATCACATACCA+TGG - chr6.2:39404063-39404082 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG + chr6.2:39404137-39404156 MS.gene058871:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG + chr6.2:39405521-39405540 MS.gene058871:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG - chr6.2:39404145-39404164 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG + chr6.2:39404904-39404923 MS.gene058871:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG + chr6.2:39404143-39404162 MS.gene058871:CDS 55.0%
TCCATGGTATGTGATGCCGG+TGG + chr6.2:39404059-39404078 MS.gene058871:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG + chr6.2:39404264-39404283 MS.gene058871:CDS 55.0%
! ATCAGCTAGCTCTCCGTCAG+GGG - chr6.2:39403559-39403578 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+GGG - chr6.2:39403560-39403579 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG + chr6.2:39403581-39403600 MS.gene058871:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG + chr6.2:39405520-39405539 MS.gene058871:CDS 60.0%
CCTGACGGAGAGCTAGCTGA+TGG + chr6.2:39403558-39403577 MS.gene058871:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG + chr6.2:39404148-39404167 MS.gene058871:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG + chr6.2:39405522-39405541 MS.gene058871:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG - chr6.2:39405622-39405641 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG - chr6.2:39405526-39405545 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG + chr6.2:39404147-39404166 MS.gene058871:CDS 60.0%
! CCATCAGCTAGCTCTCCGTC+AGG - chr6.2:39403561-39403580 None:intergenic 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG + chr6.2:39403563-39403582 MS.gene058871:CDS 60.0%
! TCAGCTAGCTCTCCGTCAGG+GGG - chr6.2:39403558-39403577 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 39403513 39405972 39403513 ID=MS.gene058871
chr6.2 mRNA 39403513 39405972 39403513 ID=MS.gene058871.t1;Parent=MS.gene058871
chr6.2 exon 39403513 39405726 39403513 ID=MS.gene058871.t1.exon1;Parent=MS.gene058871.t1
chr6.2 CDS 39403513 39405726 39403513 ID=cds.MS.gene058871.t1;Parent=MS.gene058871.t1
chr6.2 exon 39405835 39405972 39405835 ID=MS.gene058871.t1.exon2;Parent=MS.gene058871.t1
chr6.2 CDS 39405835 39405972 39405835 ID=cds.MS.gene058871.t1;Parent=MS.gene058871.t1
Gene Sequence

>MS.gene058871

ATGGTTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCCTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCAATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGCCAATCCATTTTACTAGGTTGCGGTCTTTTATCATCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTTCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCACTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATGAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAAGACGATGGAGGACTCATTATCACATCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTGAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene058871.t1

MVDGPPILIDHPLLPPDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSSKKLGKMSLQPHCGVGGDHSLKTMEDSLSHQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFEASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF