Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059109.t1 | XP_003588574.1 | 72.1 | 208 | 12 | 2 | 40 | 201 | 2 | 209 | 1.50E-71 | 279.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059109.t1 | Q9FLJ2 | 45.8 | 168 | 44 | 4 | 60 | 181 | 11 | 177 | 2.1e-31 | 137.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059109.t1 | G7I524 | 72.1 | 208 | 12 | 2 | 40 | 201 | 2 | 209 | 1.0e-71 | 279.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene059109.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059109.t1 | MTR_1g008740 | 72.115 | 208 | 12 | 2 | 40 | 201 | 2 | 209 | 3.40e-97 | 286 |
MS.gene059109.t1 | MTR_1g008740 | 70.769 | 195 | 11 | 2 | 53 | 201 | 1 | 195 | 1.50e-88 | 264 |
MS.gene059109.t1 | MTR_3g109340 | 55.665 | 203 | 38 | 6 | 46 | 198 | 1 | 201 | 8.74e-62 | 196 |
MS.gene059109.t1 | MTR_3g109340 | 55.172 | 203 | 38 | 7 | 46 | 198 | 1 | 200 | 3.70e-59 | 189 |
MS.gene059109.t1 | MTR_6g084430 | 50.000 | 158 | 34 | 3 | 62 | 176 | 2 | 157 | 1.13e-40 | 140 |
MS.gene059109.t1 | MTR_2g078700 | 45.806 | 155 | 35 | 4 | 65 | 171 | 23 | 176 | 3.54e-37 | 133 |
MS.gene059109.t1 | MTR_4g108760 | 46.203 | 158 | 38 | 5 | 65 | 176 | 17 | 173 | 4.39e-37 | 132 |
MS.gene059109.t1 | MTR_3g435150 | 43.636 | 165 | 45 | 5 | 59 | 176 | 9 | 172 | 5.73e-36 | 128 |
MS.gene059109.t1 | MTR_7g085260 | 42.105 | 171 | 48 | 3 | 65 | 185 | 17 | 186 | 1.49e-34 | 126 |
MS.gene059109.t1 | MTR_6g012670 | 41.899 | 179 | 53 | 6 | 44 | 176 | 3 | 176 | 1.42e-33 | 122 |
MS.gene059109.t1 | MTR_6g032770 | 41.176 | 170 | 50 | 5 | 65 | 185 | 18 | 186 | 1.16e-32 | 120 |
MS.gene059109.t1 | MTR_3g070030 | 41.509 | 159 | 45 | 4 | 65 | 176 | 19 | 176 | 1.48e-30 | 115 |
MS.gene059109.t1 | MTR_3g116070 | 42.336 | 137 | 34 | 2 | 59 | 150 | 17 | 153 | 5.36e-29 | 110 |
MS.gene059109.t1 | MTR_3g070040 | 41.558 | 154 | 43 | 6 | 69 | 176 | 12 | 164 | 3.73e-27 | 105 |
MS.gene059109.t1 | MTR_2g064470 | 38.788 | 165 | 51 | 5 | 62 | 180 | 8 | 168 | 4.44e-27 | 104 |
MS.gene059109.t1 | MTR_7g011130 | 38.095 | 168 | 44 | 4 | 68 | 176 | 22 | 188 | 1.01e-26 | 104 |
MS.gene059109.t1 | MTR_2g064090 | 38.462 | 156 | 46 | 4 | 64 | 171 | 5 | 158 | 6.38e-26 | 102 |
MS.gene059109.t1 | MTR_5g012080 | 37.908 | 153 | 47 | 3 | 65 | 170 | 7 | 158 | 8.60e-26 | 102 |
MS.gene059109.t1 | MTR_6g477900 | 37.662 | 154 | 49 | 3 | 65 | 172 | 6 | 158 | 4.21e-25 | 98.2 |
MS.gene059109.t1 | MTR_4g101680 | 38.816 | 152 | 45 | 4 | 65 | 170 | 7 | 156 | 5.67e-25 | 100 |
MS.gene059109.t1 | MTR_4g036030 | 38.158 | 152 | 46 | 4 | 65 | 170 | 7 | 156 | 9.87e-25 | 99.4 |
MS.gene059109.t1 | MTR_3g064580 | 35.897 | 156 | 52 | 3 | 64 | 172 | 5 | 159 | 1.03e-24 | 101 |
MS.gene059109.t1 | MTR_7g011120 | 34.896 | 192 | 55 | 6 | 68 | 192 | 11 | 199 | 1.15e-24 | 98.6 |
MS.gene059109.t1 | MTR_5g076850 | 36.774 | 155 | 51 | 3 | 64 | 172 | 5 | 158 | 2.13e-24 | 100 |
MS.gene059109.t1 | MTR_2g062730 | 35.882 | 170 | 58 | 5 | 55 | 177 | 2 | 167 | 3.65e-24 | 97.8 |
MS.gene059109.t1 | MTR_4g035590 | 38.158 | 152 | 45 | 4 | 65 | 170 | 8 | 156 | 3.85e-24 | 97.8 |
MS.gene059109.t1 | MTR_3g088110 | 34.104 | 173 | 61 | 4 | 62 | 185 | 4 | 172 | 5.98e-24 | 96.3 |
MS.gene059109.t1 | MTR_7g005280 | 35.669 | 157 | 50 | 5 | 65 | 175 | 15 | 166 | 6.77e-24 | 95.5 |
MS.gene059109.t1 | MTR_1g096430 | 36.025 | 161 | 55 | 4 | 62 | 176 | 4 | 162 | 7.94e-24 | 96.7 |
MS.gene059109.t1 | MTR_8g024480 | 33.333 | 186 | 67 | 4 | 62 | 191 | 12 | 196 | 2.27e-23 | 96.7 |
MS.gene059109.t1 | MTR_5g021710 | 35.484 | 155 | 52 | 4 | 62 | 170 | 5 | 157 | 2.39e-23 | 95.5 |
MS.gene059109.t1 | MTR_4g081870 | 33.918 | 171 | 58 | 6 | 55 | 175 | 1 | 166 | 4.83e-23 | 93.6 |
MS.gene059109.t1 | MTR_5g041940 | 35.256 | 156 | 48 | 5 | 65 | 170 | 3 | 155 | 9.77e-23 | 92.4 |
MS.gene059109.t1 | MTR_7g100990 | 33.333 | 171 | 63 | 4 | 55 | 175 | 1 | 170 | 1.26e-22 | 93.2 |
MS.gene059109.t1 | MTR_2g079990 | 34.591 | 159 | 55 | 5 | 64 | 176 | 15 | 170 | 1.32e-22 | 93.6 |
MS.gene059109.t1 | MTR_8g076110 | 32.500 | 160 | 60 | 4 | 62 | 175 | 3 | 160 | 2.55e-22 | 92.4 |
MS.gene059109.t1 | MTR_8g059170 | 32.075 | 159 | 61 | 3 | 64 | 176 | 13 | 170 | 3.92e-22 | 92.0 |
MS.gene059109.t1 | MTR_2157s0010 | 34.756 | 164 | 50 | 4 | 65 | 172 | 8 | 170 | 4.97e-22 | 90.9 |
MS.gene059109.t1 | MTR_8g094580 | 32.941 | 170 | 62 | 6 | 55 | 177 | 1 | 165 | 1.71e-21 | 89.7 |
MS.gene059109.t1 | MTR_2g080010 | 32.184 | 174 | 54 | 4 | 58 | 171 | 8 | 177 | 1.89e-21 | 90.5 |
MS.gene059109.t1 | MTR_1g090723 | 31.613 | 155 | 61 | 2 | 67 | 176 | 10 | 164 | 3.55e-21 | 90.9 |
MS.gene059109.t1 | MTR_1g090723 | 31.613 | 155 | 61 | 2 | 67 | 176 | 10 | 164 | 3.68e-21 | 90.9 |
MS.gene059109.t1 | MTR_3g096920 | 32.022 | 178 | 72 | 6 | 60 | 191 | 2 | 176 | 5.49e-21 | 88.2 |
MS.gene059109.t1 | MTR_1g069805 | 31.250 | 160 | 61 | 4 | 57 | 171 | 2 | 157 | 6.00e-21 | 87.8 |
MS.gene059109.t1 | MTR_0036s0150 | 31.613 | 155 | 61 | 2 | 67 | 176 | 7 | 161 | 1.43e-20 | 89.0 |
MS.gene059109.t1 | MTR_7g085220 | 32.370 | 173 | 53 | 5 | 62 | 174 | 5 | 173 | 1.61e-20 | 87.8 |
MS.gene059109.t1 | MTR_7g097090 | 31.646 | 158 | 59 | 4 | 57 | 169 | 2 | 155 | 3.62e-20 | 86.3 |
MS.gene059109.t1 | MTR_1g090723 | 31.410 | 156 | 61 | 3 | 67 | 176 | 10 | 165 | 1.49e-19 | 86.3 |
MS.gene059109.t1 | MTR_2g093810 | 32.367 | 207 | 70 | 8 | 55 | 195 | 1 | 203 | 1.52e-19 | 85.1 |
MS.gene059109.t1 | MTR_3g093050 | 35.714 | 154 | 52 | 3 | 64 | 171 | 21 | 173 | 9.53e-19 | 84.0 |
MS.gene059109.t1 | MTR_3g093050 | 35.714 | 154 | 52 | 3 | 64 | 171 | 21 | 173 | 1.09e-18 | 83.6 |
MS.gene059109.t1 | MTR_3g096140 | 32.000 | 150 | 55 | 4 | 67 | 170 | 9 | 157 | 6.11e-18 | 80.1 |
MS.gene059109.t1 | MTR_5g069030 | 34.211 | 152 | 53 | 3 | 65 | 170 | 25 | 175 | 1.18e-17 | 80.9 |
MS.gene059109.t1 | MTR_3g096140 | 31.579 | 152 | 57 | 4 | 67 | 172 | 9 | 159 | 1.26e-17 | 80.1 |
MS.gene059109.t1 | MTR_8g099750 | 28.814 | 177 | 68 | 5 | 65 | 188 | 14 | 185 | 1.31e-16 | 75.5 |
MS.gene059109.t1 | MTR_8g093580 | 30.128 | 156 | 62 | 4 | 67 | 176 | 8 | 162 | 1.96e-16 | 77.0 |
MS.gene059109.t1 | MTR_1g097300 | 33.121 | 157 | 56 | 5 | 67 | 176 | 21 | 175 | 3.15e-16 | 76.6 |
MS.gene059109.t1 | MTR_8g063550 | 30.128 | 156 | 62 | 4 | 67 | 176 | 8 | 162 | 4.09e-16 | 76.3 |
MS.gene059109.t1 | MTR_8g063550 | 30.380 | 158 | 63 | 4 | 65 | 176 | 6 | 162 | 5.55e-16 | 75.9 |
MS.gene059109.t1 | MTR_8g063550 | 30.128 | 156 | 62 | 4 | 67 | 176 | 8 | 162 | 6.68e-16 | 75.1 |
MS.gene059109.t1 | MTR_7g070150 | 45.070 | 71 | 37 | 1 | 118 | 188 | 7 | 75 | 1.61e-14 | 66.6 |
MS.gene059109.t1 | MTR_8g094580 | 41.791 | 67 | 34 | 2 | 116 | 177 | 45 | 111 | 6.13e-12 | 62.8 |
MS.gene059109.t1 | MTR_3g096140 | 40.625 | 64 | 37 | 1 | 110 | 172 | 75 | 138 | 6.29e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059109.t1 | AT2G24430 | 54.878 | 164 | 28 | 3 | 59 | 177 | 10 | 172 | 2.66e-51 | 168 |
MS.gene059109.t1 | AT2G24430 | 54.878 | 164 | 28 | 3 | 59 | 177 | 10 | 172 | 2.66e-51 | 168 |
MS.gene059109.t1 | AT3G18400 | 50.000 | 158 | 35 | 3 | 62 | 176 | 2 | 158 | 8.51e-43 | 146 |
MS.gene059109.t1 | AT5G61430 | 45.833 | 168 | 44 | 4 | 60 | 181 | 11 | 177 | 4.52e-39 | 137 |
MS.gene059109.t1 | AT5G07680 | 44.134 | 179 | 49 | 5 | 53 | 181 | 1 | 178 | 1.50e-38 | 135 |
MS.gene059109.t1 | AT5G07680 | 45.399 | 163 | 42 | 4 | 65 | 181 | 3 | 164 | 3.46e-38 | 134 |
MS.gene059109.t1 | AT5G53950 | 45.625 | 160 | 38 | 4 | 63 | 174 | 15 | 173 | 3.40e-36 | 130 |
MS.gene059109.t1 | AT3G15170 | 44.099 | 161 | 41 | 4 | 60 | 172 | 15 | 174 | 1.15e-34 | 125 |
MS.gene059109.t1 | AT1G76420 | 42.515 | 167 | 50 | 3 | 54 | 175 | 11 | 176 | 8.67e-34 | 123 |
MS.gene059109.t1 | AT5G39610 | 43.827 | 162 | 44 | 4 | 65 | 180 | 20 | 180 | 2.45e-33 | 120 |
MS.gene059109.t1 | AT3G04060 | 40.678 | 177 | 57 | 5 | 56 | 185 | 11 | 186 | 4.08e-33 | 121 |
MS.gene059109.t1 | AT5G18270 | 44.805 | 154 | 37 | 5 | 65 | 171 | 21 | 173 | 1.05e-32 | 120 |
MS.gene059109.t1 | AT5G18270 | 44.805 | 154 | 37 | 5 | 65 | 171 | 21 | 173 | 1.08e-32 | 120 |
MS.gene059109.t1 | AT3G29035 | 40.331 | 181 | 60 | 5 | 46 | 179 | 5 | 184 | 2.57e-30 | 113 |
MS.gene059109.t1 | AT4G27410 | 36.095 | 169 | 57 | 6 | 57 | 176 | 2 | 168 | 2.53e-27 | 105 |
MS.gene059109.t1 | AT1G12260 | 37.179 | 156 | 50 | 4 | 65 | 174 | 7 | 160 | 2.23e-25 | 100 |
MS.gene059109.t1 | AT4G10350 | 39.869 | 153 | 44 | 4 | 65 | 170 | 9 | 160 | 2.59e-25 | 100 |
MS.gene059109.t1 | AT3G12977 | 37.654 | 162 | 47 | 6 | 62 | 174 | 15 | 171 | 3.17e-25 | 99.4 |
MS.gene059109.t1 | AT1G12260 | 37.179 | 156 | 50 | 4 | 65 | 174 | 7 | 160 | 3.85e-25 | 101 |
MS.gene059109.t1 | AT3G17730 | 37.662 | 154 | 49 | 3 | 65 | 172 | 6 | 158 | 4.87e-25 | 98.2 |
MS.gene059109.t1 | AT1G65910 | 37.423 | 163 | 47 | 4 | 64 | 176 | 5 | 162 | 6.07e-25 | 102 |
MS.gene059109.t1 | AT1G69490 | 37.037 | 162 | 53 | 5 | 62 | 175 | 6 | 166 | 7.09e-25 | 98.2 |
MS.gene059109.t1 | AT4G36160 | 36.601 | 153 | 49 | 4 | 64 | 170 | 13 | 163 | 1.35e-24 | 99.4 |
MS.gene059109.t1 | AT4G36160 | 36.601 | 153 | 49 | 4 | 64 | 170 | 9 | 159 | 1.48e-24 | 99.4 |
MS.gene059109.t1 | AT4G36160 | 36.601 | 153 | 49 | 4 | 64 | 170 | 9 | 159 | 1.48e-24 | 99.4 |
MS.gene059109.t1 | AT2G18060 | 35.443 | 158 | 54 | 4 | 64 | 175 | 8 | 163 | 1.65e-24 | 99.0 |
MS.gene059109.t1 | AT2G18060 | 35.443 | 158 | 54 | 4 | 64 | 175 | 8 | 163 | 1.65e-24 | 99.0 |
MS.gene059109.t1 | AT1G33280 | 39.474 | 152 | 43 | 4 | 65 | 170 | 8 | 156 | 1.81e-24 | 97.8 |
MS.gene059109.t1 | AT5G62380 | 36.478 | 159 | 53 | 4 | 65 | 177 | 7 | 163 | 1.83e-24 | 98.6 |
MS.gene059109.t1 | AT5G62380 | 36.478 | 159 | 53 | 4 | 65 | 177 | 7 | 163 | 1.83e-24 | 98.6 |
MS.gene059109.t1 | AT3G10500 | 38.365 | 159 | 51 | 4 | 64 | 176 | 8 | 165 | 4.94e-24 | 99.0 |
MS.gene059109.t1 | AT1G62700 | 37.179 | 156 | 50 | 4 | 65 | 174 | 7 | 160 | 6.43e-24 | 97.8 |
MS.gene059109.t1 | AT1G62700 | 37.179 | 156 | 50 | 4 | 65 | 174 | 7 | 160 | 6.43e-24 | 97.8 |
MS.gene059109.t1 | AT3G61910 | 33.889 | 180 | 58 | 4 | 62 | 181 | 8 | 186 | 1.16e-23 | 96.3 |
MS.gene059109.t1 | AT3G04070 | 32.768 | 177 | 62 | 4 | 58 | 178 | 3 | 178 | 1.27e-23 | 96.3 |
MS.gene059109.t1 | AT2G33480 | 36.735 | 147 | 51 | 3 | 65 | 170 | 15 | 160 | 2.00e-23 | 94.4 |
MS.gene059109.t1 | AT1G71930 | 34.839 | 155 | 53 | 4 | 62 | 170 | 6 | 158 | 2.20e-23 | 95.5 |
MS.gene059109.t1 | AT1G71930 | 34.839 | 155 | 53 | 4 | 62 | 170 | 6 | 158 | 2.20e-23 | 95.5 |
MS.gene059109.t1 | AT2G46770 | 35.503 | 169 | 48 | 5 | 62 | 170 | 13 | 180 | 3.14e-23 | 95.5 |
MS.gene059109.t1 | AT1G56010 | 34.177 | 158 | 57 | 2 | 62 | 172 | 16 | 173 | 3.22e-23 | 95.1 |
MS.gene059109.t1 | AT5G13180 | 33.766 | 154 | 58 | 3 | 65 | 175 | 14 | 166 | 5.41e-23 | 93.2 |
MS.gene059109.t1 | AT3G03200 | 35.714 | 154 | 51 | 3 | 64 | 170 | 5 | 157 | 6.39e-23 | 95.5 |
MS.gene059109.t1 | AT5G04410 | 35.849 | 159 | 55 | 3 | 64 | 176 | 8 | 165 | 1.04e-22 | 95.5 |
MS.gene059109.t1 | AT3G10490 | 36.196 | 163 | 54 | 5 | 57 | 171 | 19 | 179 | 1.33e-22 | 91.7 |
MS.gene059109.t1 | AT1G01720 | 35.220 | 159 | 55 | 5 | 65 | 176 | 7 | 164 | 1.38e-22 | 92.8 |
MS.gene059109.t1 | AT2G33480 | 37.415 | 147 | 48 | 4 | 65 | 170 | 15 | 158 | 1.96e-22 | 91.7 |
MS.gene059109.t1 | AT1G52890 | 33.758 | 157 | 59 | 4 | 64 | 176 | 13 | 168 | 2.39e-22 | 92.4 |
MS.gene059109.t1 | AT5G17260 | 35.714 | 154 | 51 | 3 | 64 | 170 | 5 | 157 | 3.22e-22 | 93.6 |
MS.gene059109.t1 | AT5G66300 | 33.333 | 153 | 55 | 2 | 64 | 170 | 11 | 162 | 6.88e-22 | 90.9 |
MS.gene059109.t1 | AT1G79580 | 38.065 | 155 | 44 | 5 | 64 | 170 | 16 | 166 | 1.20e-21 | 91.3 |
MS.gene059109.t1 | AT1G79580 | 38.065 | 155 | 44 | 5 | 64 | 170 | 16 | 166 | 1.20e-21 | 91.3 |
MS.gene059109.t1 | AT1G79580 | 38.065 | 155 | 44 | 5 | 64 | 170 | 16 | 166 | 1.20e-21 | 91.3 |
MS.gene059109.t1 | AT1G79580 | 38.065 | 155 | 44 | 5 | 64 | 170 | 16 | 166 | 1.20e-21 | 91.3 |
MS.gene059109.t1 | AT1G79580 | 38.065 | 155 | 44 | 5 | 64 | 170 | 16 | 166 | 1.20e-21 | 91.3 |
MS.gene059109.t1 | AT3G10490 | 36.196 | 163 | 54 | 5 | 57 | 171 | 19 | 179 | 1.22e-21 | 92.0 |
MS.gene059109.t1 | AT5G61430 | 63.636 | 66 | 21 | 1 | 119 | 181 | 49 | 114 | 1.55e-21 | 89.7 |
MS.gene059109.t1 | AT3G15500 | 33.758 | 157 | 59 | 4 | 64 | 176 | 13 | 168 | 1.61e-21 | 90.1 |
MS.gene059109.t1 | AT3G10480 | 37.580 | 157 | 46 | 6 | 64 | 171 | 26 | 179 | 2.22e-21 | 91.3 |
MS.gene059109.t1 | AT3G04070 | 30.052 | 193 | 62 | 4 | 58 | 178 | 3 | 194 | 3.05e-21 | 90.1 |
MS.gene059109.t1 | AT3G10480 | 36.129 | 155 | 50 | 5 | 64 | 171 | 26 | 178 | 7.19e-21 | 89.7 |
MS.gene059109.t1 | AT5G08790 | 33.537 | 164 | 60 | 5 | 62 | 177 | 4 | 166 | 1.55e-20 | 87.0 |
MS.gene059109.t1 | AT5G63790 | 33.523 | 176 | 63 | 7 | 54 | 177 | 46 | 219 | 2.55e-20 | 87.0 |
MS.gene059109.t1 | AT5G63790 | 33.143 | 175 | 65 | 6 | 54 | 177 | 36 | 209 | 2.75e-20 | 87.0 |
MS.gene059109.t1 | AT1G32770 | 33.735 | 166 | 52 | 5 | 62 | 170 | 13 | 177 | 2.97e-20 | 87.4 |
MS.gene059109.t1 | AT1G33060 | 32.203 | 177 | 73 | 3 | 44 | 174 | 3 | 178 | 3.03e-20 | 88.2 |
MS.gene059109.t1 | AT1G33060 | 32.203 | 177 | 73 | 3 | 44 | 174 | 3 | 178 | 3.13e-20 | 88.2 |
MS.gene059109.t1 | AT1G54330 | 36.601 | 153 | 47 | 5 | 64 | 170 | 5 | 153 | 1.08e-19 | 85.1 |
MS.gene059109.t1 | AT4G27410 | 29.570 | 186 | 63 | 7 | 57 | 176 | 2 | 185 | 1.34e-19 | 85.1 |
MS.gene059109.t1 | AT1G77450 | 33.758 | 157 | 51 | 5 | 65 | 172 | 10 | 162 | 2.70e-19 | 83.2 |
MS.gene059109.t1 | AT4G35580 | 35.065 | 154 | 53 | 3 | 63 | 170 | 7 | 159 | 2.83e-19 | 85.5 |
MS.gene059109.t1 | AT4G35580 | 35.065 | 154 | 53 | 3 | 63 | 170 | 7 | 159 | 2.95e-19 | 85.5 |
MS.gene059109.t1 | AT4G35580 | 35.065 | 154 | 53 | 3 | 63 | 170 | 7 | 159 | 2.97e-19 | 85.5 |
MS.gene059109.t1 | AT1G34190 | 33.974 | 156 | 56 | 4 | 67 | 176 | 18 | 172 | 4.55e-19 | 84.7 |
MS.gene059109.t1 | AT1G34180 | 33.333 | 156 | 57 | 4 | 67 | 176 | 18 | 172 | 5.43e-19 | 84.3 |
MS.gene059109.t1 | AT1G34180 | 33.540 | 161 | 50 | 5 | 67 | 176 | 18 | 172 | 6.16e-19 | 84.3 |
MS.gene059109.t1 | AT4G28530 | 29.714 | 175 | 60 | 4 | 57 | 171 | 2 | 173 | 8.45e-19 | 83.2 |
MS.gene059109.t1 | AT1G32870 | 32.584 | 178 | 70 | 5 | 45 | 176 | 29 | 202 | 1.25e-18 | 83.6 |
MS.gene059109.t1 | AT5G09330 | 34.810 | 158 | 56 | 4 | 65 | 176 | 6 | 162 | 2.71e-18 | 82.4 |
MS.gene059109.t1 | AT5G09330 | 34.810 | 158 | 56 | 4 | 65 | 176 | 6 | 162 | 2.71e-18 | 82.4 |
MS.gene059109.t1 | AT5G09330 | 34.810 | 158 | 56 | 4 | 65 | 176 | 6 | 162 | 2.71e-18 | 82.4 |
MS.gene059109.t1 | AT5G09330 | 34.810 | 158 | 56 | 4 | 65 | 176 | 6 | 162 | 2.71e-18 | 82.4 |
MS.gene059109.t1 | AT5G09330 | 34.810 | 158 | 56 | 4 | 65 | 176 | 6 | 162 | 2.71e-18 | 82.4 |
MS.gene059109.t1 | AT1G32870 | 34.177 | 158 | 57 | 4 | 65 | 176 | 10 | 166 | 1.33e-17 | 80.5 |
MS.gene059109.t1 | AT1G32870 | 34.177 | 158 | 57 | 4 | 65 | 176 | 10 | 166 | 1.35e-17 | 80.5 |
MS.gene059109.t1 | AT1G34180 | 30.952 | 168 | 57 | 4 | 67 | 176 | 18 | 184 | 2.23e-17 | 79.7 |
MS.gene059109.t1 | AT1G34180 | 31.214 | 173 | 50 | 5 | 67 | 176 | 18 | 184 | 2.53e-17 | 79.7 |
MS.gene059109.t1 | AT1G56010 | 50.847 | 59 | 25 | 1 | 116 | 170 | 46 | 104 | 2.30e-14 | 70.1 |
MS.gene059109.t1 | AT3G12977 | 53.333 | 60 | 18 | 2 | 119 | 172 | 61 | 116 | 3.30e-14 | 68.9 |
MS.gene059109.t1 | AT4G10350 | 57.692 | 52 | 21 | 1 | 120 | 170 | 62 | 113 | 5.03e-14 | 69.3 |
MS.gene059109.t1 | AT2G18060 | 48.333 | 60 | 30 | 1 | 116 | 175 | 17 | 75 | 6.20e-14 | 68.9 |
MS.gene059109.t1 | AT1G52880 | 30.247 | 162 | 50 | 6 | 69 | 171 | 21 | 178 | 7.31e-14 | 69.3 |
MS.gene059109.t1 | AT2G33480 | 54.717 | 53 | 23 | 1 | 119 | 170 | 51 | 103 | 4.51e-12 | 62.8 |
MS.gene059109.t1 | AT3G10490 | 52.727 | 55 | 24 | 1 | 119 | 171 | 25 | 79 | 2.75e-11 | 62.0 |
MS.gene059109.t1 | AT3G10490 | 52.727 | 55 | 24 | 1 | 119 | 171 | 25 | 79 | 2.75e-11 | 62.0 |
MS.gene059109.t1 | AT3G10480 | 54.386 | 57 | 22 | 2 | 118 | 171 | 157 | 212 | 2.92e-11 | 62.0 |
MS.gene059109.t1 | AT5G04395 | 50.000 | 54 | 26 | 1 | 57 | 110 | 20 | 72 | 5.39e-11 | 59.7 |
Find 46 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGGTTCTGATGCTTGATT+TGG | 0.311965 | 1.2:+11076441 | None:intergenic |
CATTGTCAGAAACTATAAAA+AGG | 0.360390 | 1.2:+11078843 | None:intergenic |
TATGTAGATATATACCTTGT+TGG | 0.385985 | 1.2:+11076423 | None:intergenic |
TAGCAAAGAAAGGAAGGATA+TGG | 0.389635 | 1.2:-11077400 | MS.gene059109:CDS |
GACTGCTCTTGTAAGATTTG+AGG | 0.407771 | 1.2:+11075409 | None:intergenic |
GTAAGTGATGAGTTCTTCAT+TGG | 0.426433 | 1.2:+11077317 | None:intergenic |
GGTTGGTATGAAGAAAACTT+TGG | 0.429083 | 1.2:-11076533 | MS.gene059109:CDS |
CTTGTAAGATTTGAGGAAGA+AGG | 0.437392 | 1.2:+11075416 | None:intergenic |
CATATATACAGCAGGATGAA+TGG | 0.442148 | 1.2:-11075484 | MS.gene059109:intron |
TACAGTATTAATCTAGAAGT+TGG | 0.456693 | 1.2:-11075377 | MS.gene059109:CDS |
ACTTCTAGATTAATACTGTA+AGG | 0.463803 | 1.2:+11075380 | None:intergenic |
GGTAGGATGAAATCGAAATC+CGG | 0.469971 | 1.2:+11077338 | None:intergenic |
AGTTGTTAGCAAAGAAAGGA+AGG | 0.471295 | 1.2:-11077406 | MS.gene059109:CDS |
AGAGTATTCCGCAAGAGTGC+AGG | 0.472263 | 1.2:-11075452 | MS.gene059109:CDS |
TTTATCAAGGATGACTTCCT+TGG | 0.477283 | 1.2:-11078782 | MS.gene059109:CDS |
AGAAAGGAAGGATATGGAAA+TGG | 0.478180 | 1.2:-11077394 | MS.gene059109:CDS |
AAGAAGTTGTTAGCAAAGAA+AGG | 0.487064 | 1.2:-11077410 | MS.gene059109:CDS |
AAAAGGAAGCATTCGTTCAC+GGG | 0.488802 | 1.2:+11078860 | None:intergenic |
ATATATACAGCAGGATGAAT+GGG | 0.489277 | 1.2:-11075483 | MS.gene059109:intron |
CTAGAGGAGAGAAAACCAAC+TGG | 0.505584 | 1.2:-11076489 | MS.gene059109:CDS |
ATGTTGTTGAGCTTAATTTG+AGG | 0.517728 | 1.2:-11078823 | MS.gene059109:CDS |
TGCTTGATTTGGAATGAATA+CGG | 0.527107 | 1.2:+11076452 | None:intergenic |
GAAATCGAAATCCGGGAGGT+AGG | 0.532076 | 1.2:+11077346 | None:intergenic |
AGATGAAGATACATTTATCA+AGG | 0.546887 | 1.2:-11078795 | MS.gene059109:CDS |
AAATCGAAATCCGGGAGGTA+GGG | 0.547523 | 1.2:+11077347 | None:intergenic |
GTGATGAGTTCTTCATTGGT+AGG | 0.552393 | 1.2:+11077321 | None:intergenic |
TCTTTGCACCTGCACTCTTG+CGG | 0.553400 | 1.2:+11075444 | None:intergenic |
TTGTAAGATTTGAGGAAGAA+GGG | 0.560765 | 1.2:+11075417 | None:intergenic |
GTAGGATGAAATCGAAATCC+GGG | 0.574700 | 1.2:+11077339 | None:intergenic |
AAGGAGGAAACCCTACCTCC+CGG | 0.588423 | 1.2:-11077357 | MS.gene059109:CDS |
AATGGAAGGAACTCGTGAGA+AGG | 0.599578 | 1.2:-11077376 | MS.gene059109:CDS |
AGGAAGGATATGGAAATGGA+AGG | 0.604501 | 1.2:-11077390 | MS.gene059109:CDS |
ATCTCAATAAATGCGAGCCA+TGG | 0.605571 | 1.2:-11077233 | MS.gene059109:intron |
GGAAGGAACTCGTGAGAAGG+AGG | 0.608531 | 1.2:-11077373 | MS.gene059109:CDS |
GTATTAATCTAGAAGTTGGT+CGG | 0.608877 | 1.2:-11075373 | MS.gene059109:CDS |
GTATTCATGCATAACCCAGT+TGG | 0.613539 | 1.2:+11076474 | None:intergenic |
CAAGGATGACTTCCTTGGTG+AGG | 0.620677 | 1.2:-11078777 | MS.gene059109:intron |
TTATTATTATTAAAGCTAGG+AGG | 0.628854 | 1.2:+11075349 | None:intergenic |
ATCAAGCATCAGAACCAACA+AGG | 0.636365 | 1.2:-11076437 | MS.gene059109:intron |
TACAAAGGTCGTGATCCTAG+AGG | 0.652667 | 1.2:-11076505 | MS.gene059109:CDS |
TATACAGCAGGATGAATGGG+TGG | 0.661975 | 1.2:-11075480 | MS.gene059109:intron |
AAAGGAAGCATTCGTTCACG+GGG | 0.666435 | 1.2:+11078861 | None:intergenic |
TAACTTACTTTACCTCACCA+AGG | 0.674025 | 1.2:+11078765 | None:intergenic |
GAAAACCACAGGGAAAGACA+AGG | 0.680177 | 1.2:-11076574 | MS.gene059109:intron |
TAGAGGAGAGAAAACCAACT+GGG | 0.691844 | 1.2:-11076488 | MS.gene059109:CDS |
GGATGAAATCGAAATCCGGG+AGG | 0.762260 | 1.2:+11077342 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAATTATATTTTTTTT+AGG | + | chr1.2:11078307-11078326 | None:intergenic | 0.0% |
!! | AAAAACATAGTAAAAAATTT+AGG | + | chr1.2:11075506-11075525 | None:intergenic | 10.0% |
!! | AAAATTTAAAGATGTATAAT+AGG | + | chr1.2:11077909-11077928 | None:intergenic | 10.0% |
!! | AAATTTAAAGATGTATAATA+GGG | + | chr1.2:11077908-11077927 | None:intergenic | 10.0% |
!! | AGAAAAAATAAAATTATTGA+CGG | - | chr1.2:11077267-11077286 | MS.gene059109:CDS | 10.0% |
!! | ATGAAAAAAATTAAGATAAT+AGG | - | chr1.2:11077875-11077894 | MS.gene059109:intron | 10.0% |
!! | TTTATAAAAACAAAAAACTA+GGG | - | chr1.2:11077200-11077219 | MS.gene059109:intron | 10.0% |
!!! | TTTTATAAAAACAAAAAACT+AGG | - | chr1.2:11077199-11077218 | MS.gene059109:intron | 10.0% |
!!! | TTTTTTTTTTTTGTGATTAA+AGG | - | chr1.2:11076221-11076240 | MS.gene059109:intron | 10.0% |
!! | AAAATTTCAACTTTAATATG+TGG | - | chr1.2:11078398-11078417 | MS.gene059109:intron | 15.0% |
!! | ATTAATTGTTTACAAAATGT+TGG | - | chr1.2:11076195-11076214 | MS.gene059109:intron | 15.0% |
!! | ATTTATTTCAATATACAACA+TGG | + | chr1.2:11077937-11077956 | None:intergenic | 15.0% |
!! | GGTTAAGAAAATTAAATATA+GGG | + | chr1.2:11076708-11076727 | None:intergenic | 15.0% |
!! | TTTCATCAAAAGTAAAAAAA+AGG | - | chr1.2:11075763-11075782 | MS.gene059109:intron | 15.0% |
!! | TTTGAACAAAATTAATTTAC+CGG | + | chr1.2:11077513-11077532 | None:intergenic | 15.0% |
!!! | AAAAAAACTCTAAATTTTTG+TGG | - | chr1.2:11078252-11078271 | MS.gene059109:intron | 15.0% |
!!! | AAAAAACTCTAAATTTTTGT+GGG | - | chr1.2:11078253-11078272 | MS.gene059109:intron | 15.0% |
!!! | AAAAAGGTTATTGATTTTTT+TGG | - | chr1.2:11075779-11075798 | MS.gene059109:intron | 15.0% |
!!! | AAATTTAAAAGCATGTATAA+AGG | + | chr1.2:11076730-11076749 | None:intergenic | 15.0% |
!!! | AATTTAAAAGCATGTATAAA+GGG | + | chr1.2:11076729-11076748 | None:intergenic | 15.0% |
!!! | ATTTACTTCAATTTTATAGT+AGG | + | chr1.2:11078065-11078084 | None:intergenic | 15.0% |
!!! | CATGAATATATGTTTTTTTA+CGG | - | chr1.2:11075968-11075987 | MS.gene059109:intron | 15.0% |
!!! | GTTTTTTGTTTTTATAAAAC+AGG | + | chr1.2:11077198-11077217 | None:intergenic | 15.0% |
!!! | TAAATAAATAGTTTTTTTGG+TGG | - | chr1.2:11075652-11075671 | MS.gene059109:intron | 15.0% |
!!! | TTCAAATTTTTTTTCTTATG+TGG | - | chr1.2:11077527-11077546 | MS.gene059109:intron | 15.0% |
!!! | TTTACTTCAATTTTATAGTA+GGG | + | chr1.2:11078064-11078083 | None:intergenic | 15.0% |
!!! | TTTATACATGCTTTTAAATT+TGG | - | chr1.2:11076729-11076748 | MS.gene059109:intron | 15.0% |
!! | AGAAAACTTCACTATATATT+AGG | + | chr1.2:11077490-11077509 | None:intergenic | 20.0% |
!! | CTTATGTGGAATAATTTATA+GGG | - | chr1.2:11077541-11077560 | MS.gene059109:intron | 20.0% |
!! | GGGTTAAGAAAATTAAATAT+AGG | + | chr1.2:11076709-11076728 | None:intergenic | 20.0% |
!! | TAGAATATATTTGCAAAGTT+TGG | + | chr1.2:11078109-11078128 | None:intergenic | 20.0% |
!! | TCCTTGATAAATGAAAAAAA+GGG | + | chr1.2:11077104-11077123 | None:intergenic | 20.0% |
!! | TCTTATGTGGAATAATTTAT+AGG | - | chr1.2:11077540-11077559 | MS.gene059109:intron | 20.0% |
!! | TTATTCAGACTATTATAAGA+TGG | + | chr1.2:11077968-11077987 | None:intergenic | 20.0% |
!!! | AAAACTTTGGTTTTTTACAA+AGG | - | chr1.2:11077719-11077738 | MS.gene059109:intron | 20.0% |
!!! | AGTTGAAGAAACTTTTTTTT+AGG | - | chr1.2:11078367-11078386 | MS.gene059109:intron | 20.0% |
!!! | ATTGGTGACAAAAAATATTA+TGG | + | chr1.2:11078035-11078054 | None:intergenic | 20.0% |
!!! | GTTGAAGAAATTTTGAATAT+AGG | + | chr1.2:11078003-11078022 | None:intergenic | 20.0% |
!!! | TCTAAAATTTGTATGCTTTT+TGG | + | chr1.2:11078520-11078539 | None:intergenic | 20.0% |
!!! | TTCAAGTTTTGTTGATTTAT+AGG | + | chr1.2:11076587-11076606 | None:intergenic | 20.0% |
!!! | TTGGTGACAAAAAATATTAT+GGG | + | chr1.2:11078034-11078053 | None:intergenic | 20.0% |
!!! | TTTTTATAAAACAGGATGAA+AGG | + | chr1.2:11077190-11077209 | None:intergenic | 20.0% |
! | AAGATGAAAGTCATATATTG+TGG | + | chr1.2:11077331-11077350 | None:intergenic | 25.0% |
! | AATTAATGACATATAACCAC+TGG | + | chr1.2:11076182-11076201 | None:intergenic | 25.0% |
! | ACTTCTAGATTAATACTGTA+AGG | + | chr1.2:11078862-11078881 | None:intergenic | 25.0% |
! | AGATGAAGATACATTTATCA+AGG | - | chr1.2:11075444-11075463 | MS.gene059109:CDS | 25.0% |
! | ATTAATGACATATAACCACT+GGG | + | chr1.2:11076181-11076200 | None:intergenic | 25.0% |
! | CATTGTCAGAAACTATAAAA+AGG | + | chr1.2:11075399-11075418 | None:intergenic | 25.0% |
! | GACAATGCATAAAATATTCA+AGG | + | chr1.2:11075709-11075728 | None:intergenic | 25.0% |
! | GTCCTTGATAAATGAAAAAA+AGG | + | chr1.2:11077105-11077124 | None:intergenic | 25.0% |
! | TACAGTATTAATCTAGAAGT+TGG | - | chr1.2:11078862-11078881 | MS.gene059109:CDS | 25.0% |
! | TATGTAGATATATACCTTGT+TGG | + | chr1.2:11077819-11077838 | None:intergenic | 25.0% |
! | TTTAGTGTTTCTTGCAAATA+AGG | - | chr1.2:11076556-11076575 | MS.gene059109:CDS | 25.0% |
! | TTTATAGTAGGGATTCAAAT+TGG | + | chr1.2:11078053-11078072 | None:intergenic | 25.0% |
!! | AATTTTACATGCAAAGCAAT+AGG | - | chr1.2:11076975-11076994 | MS.gene059109:intron | 25.0% |
!! | ATATATAGTGAAGTTTTCTC+CGG | - | chr1.2:11077491-11077510 | MS.gene059109:intron | 25.0% |
!! | ATTTTACATGCAAAGCAATA+GGG | - | chr1.2:11076976-11076995 | MS.gene059109:intron | 25.0% |
!! | TCCAGGTAAAATTTTATGTA+TGG | - | chr1.2:11077034-11077053 | MS.gene059109:intron | 25.0% |
!! | TCCATACATAAAATTTTACC+TGG | + | chr1.2:11077038-11077057 | None:intergenic | 25.0% |
!! | TTTTTGTGATTAAAGGATGT+CGG | - | chr1.2:11076228-11076247 | MS.gene059109:intron | 25.0% |
!!! | AATTTGTATGCTTTTTGGAT+TGG | + | chr1.2:11078515-11078534 | None:intergenic | 25.0% |
!!! | ATAAATAGTTTTTTTGGTGG+TGG | - | chr1.2:11075655-11075674 | MS.gene059109:intron | 25.0% |
!!! | TTTGGATTGGTTGTAATTAT+AGG | + | chr1.2:11078502-11078521 | None:intergenic | 25.0% |
AAATATGCTAACAAATTGCG+TGG | - | chr1.2:11075996-11076015 | MS.gene059109:intron | 30.0% | |
AAGAAGTTGTTAGCAAAGAA+AGG | - | chr1.2:11076829-11076848 | MS.gene059109:intron | 30.0% | |
AAGTTTCAAGCATCAACTAA+AGG | + | chr1.2:11076069-11076088 | None:intergenic | 30.0% | |
AGTTGAAGTATAAAGGAGAT+AGG | + | chr1.2:11076516-11076535 | None:intergenic | 30.0% | |
ATATATACAGCAGGATGAAT+GGG | - | chr1.2:11078756-11078775 | MS.gene059109:intron | 30.0% | |
ATTCTTCAACATATCATGCA+TGG | - | chr1.2:11076471-11076490 | MS.gene059109:CDS | 30.0% | |
CAAAGTCATTGAAGAAAACA+AGG | + | chr1.2:11076438-11076457 | None:intergenic | 30.0% | |
CGAATTTACATATATACAGC+AGG | - | chr1.2:11078747-11078766 | MS.gene059109:intron | 30.0% | |
CTTTCATCTTTCTTGTGATA+TGG | - | chr1.2:11077341-11077360 | MS.gene059109:CDS | 30.0% | |
GTCGGTTAAATGGTTAATAT+GGG | - | chr1.2:11076246-11076265 | MS.gene059109:intron | 30.0% | |
TCTTTCTTGTGATATGGTTA+AGG | - | chr1.2:11077347-11077366 | MS.gene059109:CDS | 30.0% | |
TGTGGAATAATTTATAGGGA+AGG | - | chr1.2:11077545-11077564 | MS.gene059109:intron | 30.0% | |
TTGTAAGATTTGAGGAAGAA+GGG | + | chr1.2:11078825-11078844 | None:intergenic | 30.0% | |
! | AGGAGATTTTCAATCAGAAT+TGG | - | chr1.2:11077685-11077704 | MS.gene059109:intron | 30.0% |
! | ATGTTGTTGAGCTTAATTTG+AGG | - | chr1.2:11075416-11075435 | MS.gene059109:CDS | 30.0% |
! | ATTAAAGGATGTCGGTTAAA+TGG | - | chr1.2:11076236-11076255 | MS.gene059109:intron | 30.0% |
! | GATTTTCAATCAGAATTGGT+TGG | - | chr1.2:11077689-11077708 | MS.gene059109:intron | 30.0% |
! | GTATTAATCTAGAAGTTGGT+CGG | - | chr1.2:11078866-11078885 | MS.gene059109:CDS | 30.0% |
! | TGTCGGTTAAATGGTTAATA+TGG | - | chr1.2:11076245-11076264 | MS.gene059109:intron | 30.0% |
! | TTTTACATGCAAAGCAATAG+GGG | - | chr1.2:11076977-11076996 | MS.gene059109:intron | 30.0% |
!! | GCAATTGAGTTGAAGTATAA+AGG | + | chr1.2:11076523-11076542 | None:intergenic | 30.0% |
!! | TGCTTGATTTGGAATGAATA+CGG | + | chr1.2:11077790-11077809 | None:intergenic | 30.0% |
!! | TTTTTGTGTGTTATTCCAGA+AGG | - | chr1.2:11076803-11076822 | MS.gene059109:intron | 30.0% |
!!! | GCCCTTTTTTTCATTTATCA+AGG | - | chr1.2:11077100-11077119 | MS.gene059109:intron | 30.0% |
AAACAACTCATCAATTCGCT+AGG | - | chr1.2:11076329-11076348 | MS.gene059109:intron | 35.0% | |
AATTCGCTAGGTATCTTTCT+TGG | - | chr1.2:11076341-11076360 | MS.gene059109:intron | 35.0% | |
ACTAATAGAGCAACAAACAC+TGG | - | chr1.2:11077636-11077655 | MS.gene059109:intron | 35.0% | |
AGAAAGGAAGGATATGGAAA+TGG | - | chr1.2:11076845-11076864 | MS.gene059109:intron | 35.0% | |
AGAGATCGTAAATATCCAAC+AGG | - | chr1.2:11077606-11077625 | MS.gene059109:intron | 35.0% | |
AGTTGTTAGCAAAGAAAGGA+AGG | - | chr1.2:11076833-11076852 | MS.gene059109:intron | 35.0% | |
CATAAAATATTCAAGGTCCG+AGG | + | chr1.2:11075702-11075721 | None:intergenic | 35.0% | |
CATATATACAGCAGGATGAA+TGG | - | chr1.2:11078755-11078774 | MS.gene059109:intron | 35.0% | |
CTTGTAAGATTTGAGGAAGA+AGG | + | chr1.2:11078826-11078845 | None:intergenic | 35.0% | |
GCAAGAAACACTAAACTTGA+GGG | + | chr1.2:11076551-11076570 | None:intergenic | 35.0% | |
GTAAGTGATGAGTTCTTCAT+TGG | + | chr1.2:11076925-11076944 | None:intergenic | 35.0% | |
GTTAATATGGGCAAGAACTA+TGG | - | chr1.2:11076258-11076277 | MS.gene059109:intron | 35.0% | |
TAACAACTTCTTTGTCCTTC+TGG | + | chr1.2:11076821-11076840 | None:intergenic | 35.0% | |
TAACTTACTTTACCTCACCA+AGG | + | chr1.2:11075477-11075496 | None:intergenic | 35.0% | |
TAGCAAAGAAAGGAAGGATA+TGG | - | chr1.2:11076839-11076858 | MS.gene059109:intron | 35.0% | |
TGCAAGAAACACTAAACTTG+AGG | + | chr1.2:11076552-11076571 | None:intergenic | 35.0% | |
TTAGTCTAAACCGTCATAGT+TGG | - | chr1.2:11078469-11078488 | MS.gene059109:intron | 35.0% | |
TTTATCAAGGATGACTTCCT+TGG | - | chr1.2:11075457-11075476 | MS.gene059109:CDS | 35.0% | |
! | GGTTGGTATGAAGAAAACTT+TGG | - | chr1.2:11077706-11077725 | MS.gene059109:intron | 35.0% |
! | GTGAAGTTTTCACCAAATGT+GGG | + | chr1.2:11076403-11076422 | None:intergenic | 35.0% |
! | TGTGAAGTTTTCACCAAATG+TGG | + | chr1.2:11076404-11076423 | None:intergenic | 35.0% |
!! | AAAAAGGAAGCATTCGTTCA+CGG | + | chr1.2:11075383-11075402 | None:intergenic | 35.0% |
!! | GGAGAGACAAACTTTTTCTT+TGG | + | chr1.2:11076610-11076629 | None:intergenic | 35.0% |
ACTGGATATTGGAAAACCAC+AGG | - | chr1.2:11077654-11077673 | MS.gene059109:intron | 40.0% | |
AGCTGTATGACTCAACTTGA+AGG | - | chr1.2:11076371-11076390 | MS.gene059109:intron | 40.0% | |
AGGAAGGATATGGAAATGGA+AGG | - | chr1.2:11076849-11076868 | MS.gene059109:intron | 40.0% | |
ATCAAGCATCAGAACCAACA+AGG | - | chr1.2:11077802-11077821 | MS.gene059109:intron | 40.0% | |
ATCTCAATAAATGCGAGCCA+TGG | - | chr1.2:11077006-11077025 | MS.gene059109:intron | 40.0% | |
ATTTATAGGGAAGGCCAAGA+TGG | - | chr1.2:11077554-11077573 | MS.gene059109:intron | 40.0% | |
CCAAGATGGGTACAAAAGAA+TGG | - | chr1.2:11077568-11077587 | MS.gene059109:intron | 40.0% | |
CTGGATATTGGAAAACCACA+GGG | - | chr1.2:11077655-11077674 | MS.gene059109:intron | 40.0% | |
GACTGCTCTTGTAAGATTTG+AGG | + | chr1.2:11078833-11078852 | None:intergenic | 40.0% | |
GAGCAACAAACACTGGATAT+TGG | - | chr1.2:11077643-11077662 | MS.gene059109:intron | 40.0% | |
GATGACTTTGCTTACTTGCA+TGG | + | chr1.2:11076631-11076650 | None:intergenic | 40.0% | |
GGTAGGATGAAATCGAAATC+CGG | + | chr1.2:11076904-11076923 | None:intergenic | 40.0% | |
GTAGGATGAAATCGAAATCC+GGG | + | chr1.2:11076903-11076922 | None:intergenic | 40.0% | |
GTATTCATGCATAACCCAGT+TGG | + | chr1.2:11077768-11077787 | None:intergenic | 40.0% | |
GTGATGAGTTCTTCATTGGT+AGG | + | chr1.2:11076921-11076940 | None:intergenic | 40.0% | |
TAGAGGAGAGAAAACCAACT+GGG | - | chr1.2:11077751-11077770 | MS.gene059109:intron | 40.0% | |
TGAAGGTAAAGACCCACATT+TGG | - | chr1.2:11076388-11076407 | MS.gene059109:intron | 40.0% | |
TTTATAGGGAAGGCCAAGAT+GGG | - | chr1.2:11077555-11077574 | MS.gene059109:intron | 40.0% | |
! | ATTTTACCTGGAAGCTACCA+TGG | + | chr1.2:11077026-11077045 | None:intergenic | 40.0% |
! | CCATTCTTTTGTACCCATCT+TGG | + | chr1.2:11077571-11077590 | None:intergenic | 40.0% |
! | CTATTAGTTCTCACACCTGT+TGG | + | chr1.2:11077624-11077643 | None:intergenic | 40.0% |
!! | AAAAGGAAGCATTCGTTCAC+GGG | + | chr1.2:11075382-11075401 | None:intergenic | 40.0% |
!! | GTTGGTTCTGATGCTTGATT+TGG | + | chr1.2:11077801-11077820 | None:intergenic | 40.0% |
!!! | TGTGTGTGTGTGTGCTTTTT+TGG | + | chr1.2:11078690-11078709 | None:intergenic | 40.0% |
AAATCGAAATCCGGGAGGTA+GGG | + | chr1.2:11076895-11076914 | None:intergenic | 45.0% | |
AACCACTGGGTAAAAGCTCA+AGG | + | chr1.2:11076168-11076187 | None:intergenic | 45.0% | |
AATCTCCTTGTCTTTCCCTG+TGG | + | chr1.2:11077673-11077692 | None:intergenic | 45.0% | |
AATGGAAGGAACTCGTGAGA+AGG | - | chr1.2:11076863-11076882 | MS.gene059109:intron | 45.0% | |
AGCACACACACACACATACA+TGG | - | chr1.2:11078694-11078713 | MS.gene059109:intron | 45.0% | |
CTAGAGGAGAGAAAACCAAC+TGG | - | chr1.2:11077750-11077769 | MS.gene059109:intron | 45.0% | |
GAAAACCACAGGGAAAGACA+AGG | - | chr1.2:11077665-11077684 | MS.gene059109:intron | 45.0% | |
GGGTAAAAGCTCAAGGATAG+AGG | + | chr1.2:11076161-11076180 | None:intergenic | 45.0% | |
TACAAAGGTCGTGATCCTAG+AGG | - | chr1.2:11077734-11077753 | MS.gene059109:intron | 45.0% | |
TATACAGCAGGATGAATGGG+TGG | - | chr1.2:11078759-11078778 | MS.gene059109:intron | 45.0% | |
! | ATCCTTGAGCTTTTACCCAG+TGG | - | chr1.2:11076163-11076182 | MS.gene059109:intron | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr1.2:11075731-11075750 | None:intergenic | 45.0% |
!! | AAAGGAAGCATTCGTTCACG+GGG | + | chr1.2:11075381-11075400 | None:intergenic | 45.0% |
!! | AGGAGTGTCTCCAACTATGA+CGG | + | chr1.2:11078482-11078501 | None:intergenic | 45.0% |
!!! | CAGTTGGTTTTCTCTCCTCT+AGG | + | chr1.2:11077752-11077771 | None:intergenic | 45.0% |
!! | TTAAAGAAAATTAATATATA+TGG | - | chr1.2:11077421-11077440 | MS.gene059109:intron | 5.0% |
!!! | AAAAAAATAATTTGATTTTT+AGG | - | chr1.2:11078154-11078173 | MS.gene059109:intron | 5.0% |
!!! | AAAAAAGAATAATTTTTTAA+TGG | - | chr1.2:11075831-11075850 | MS.gene059109:intron | 5.0% |
!!! | TAATAAATAAATAGTTTTTT+TGG | - | chr1.2:11075649-11075668 | MS.gene059109:intron | 5.0% |
CAAGGATGACTTCCTTGGTG+AGG | - | chr1.2:11075462-11075481 | MS.gene059109:CDS | 50.0% | |
GAAATCGAAATCCGGGAGGT+AGG | + | chr1.2:11076896-11076915 | None:intergenic | 50.0% | |
GATTCGAACCTCGGAAACCT+CGG | - | chr1.2:11075682-11075701 | MS.gene059109:intron | 50.0% | |
GGATGAAATCGAAATCCGGG+AGG | + | chr1.2:11076900-11076919 | None:intergenic | 50.0% | |
TCTTTGCACCTGCACTCTTG+CGG | + | chr1.2:11078798-11078817 | None:intergenic | 50.0% | |
! | AGAGTATTCCGCAAGAGTGC+AGG | - | chr1.2:11078787-11078806 | MS.gene059109:CDS | 50.0% |
AAGGAGGAAACCCTACCTCC+CGG | - | chr1.2:11076882-11076901 | MS.gene059109:intron | 55.0% | |
CCAACTGAGCTAAGCTCACG+TGG | - | chr1.2:11075733-11075752 | MS.gene059109:intron | 55.0% | |
CCACGTGAGCTTAGCTCAGT+TGG | + | chr1.2:11075736-11075755 | None:intergenic | 55.0% | |
GGAAGGAACTCGTGAGAAGG+AGG | - | chr1.2:11076866-11076885 | MS.gene059109:intron | 55.0% | |
GGTGGCTGAGATTCGAACCT+CGG | - | chr1.2:11075673-11075692 | MS.gene059109:intron | 55.0% | |
TTCAAGGTCCGAGGTTTCCG+AGG | + | chr1.2:11075693-11075712 | None:intergenic | 55.0% | |
TGCGAGCCATGGTAGCTTCC+AGG | - | chr1.2:11077017-11077036 | MS.gene059109:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 11075364 | 11078897 | 11075364 | ID=MS.gene059109 |
chr1.2 | mRNA | 11075364 | 11078897 | 11075364 | ID=MS.gene059109.t1;Parent=MS.gene059109 |
chr1.2 | exon | 11078778 | 11078897 | 11078778 | ID=MS.gene059109.t1.exon1;Parent=MS.gene059109.t1 |
chr1.2 | CDS | 11078778 | 11078897 | 11078778 | ID=cds.MS.gene059109.t1;Parent=MS.gene059109.t1 |
chr1.2 | exon | 11077234 | 11077439 | 11077234 | ID=MS.gene059109.t1.exon2;Parent=MS.gene059109.t1 |
chr1.2 | CDS | 11077234 | 11077439 | 11077234 | ID=cds.MS.gene059109.t1;Parent=MS.gene059109.t1 |
chr1.2 | exon | 11076438 | 11076585 | 11076438 | ID=MS.gene059109.t1.exon3;Parent=MS.gene059109.t1 |
chr1.2 | CDS | 11076438 | 11076585 | 11076438 | ID=cds.MS.gene059109.t1;Parent=MS.gene059109.t1 |
chr1.2 | exon | 11075364 | 11075495 | 11075364 | ID=MS.gene059109.t1.exon4;Parent=MS.gene059109.t1 |
chr1.2 | CDS | 11075364 | 11075495 | 11075364 | ID=cds.MS.gene059109.t1;Parent=MS.gene059109.t1 |
Gene Sequence |
Protein sequence |