Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059525.t1 | XP_024636215.1 | 97.5 | 198 | 5 | 0 | 1 | 198 | 1 | 198 | 1.10E-82 | 316.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059525.t1 | Q1PFC2 | 57.3 | 199 | 84 | 1 | 1 | 198 | 1 | 199 | 8.9e-54 | 211.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059525.t1 | A0A072UYG7 | 93.9 | 198 | 12 | 0 | 1 | 198 | 1 | 198 | 1.3e-77 | 298.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene059525.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059525.t1 | MTR_4g084740 | 93.434 | 198 | 13 | 0 | 1 | 198 | 1 | 198 | 1.96e-131 | 372 |
MS.gene059525.t1 | MTR_5g061740 | 77.778 | 198 | 28 | 1 | 1 | 198 | 1 | 182 | 1.02e-107 | 312 |
MS.gene059525.t1 | MTR_3g102570 | 45.109 | 184 | 89 | 1 | 1 | 184 | 1 | 172 | 4.88e-48 | 159 |
MS.gene059525.t1 | MTR_5g041650 | 35.417 | 192 | 109 | 4 | 1 | 191 | 38 | 215 | 4.89e-29 | 111 |
MS.gene059525.t1 | MTR_4g108720 | 35.938 | 192 | 108 | 4 | 1 | 191 | 1 | 178 | 6.76e-27 | 105 |
MS.gene059525.t1 | MTR_7g075870 | 33.333 | 189 | 88 | 3 | 1 | 189 | 1 | 151 | 1.18e-24 | 96.3 |
MS.gene059525.t1 | MTR_3g005530 | 33.514 | 185 | 84 | 2 | 1 | 185 | 1 | 146 | 2.85e-24 | 95.5 |
MS.gene059525.t1 | MTR_7g075850 | 34.409 | 186 | 82 | 3 | 1 | 185 | 1 | 147 | 3.97e-24 | 95.9 |
MS.gene059525.t1 | MTR_5g046870 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.83e-23 | 90.5 |
MS.gene059525.t1 | MTR_7g016630 | 31.579 | 190 | 90 | 2 | 1 | 190 | 1 | 150 | 1.85e-23 | 94.4 |
MS.gene059525.t1 | MTR_7g075870 | 33.333 | 189 | 87 | 4 | 1 | 189 | 1 | 150 | 3.99e-23 | 92.4 |
MS.gene059525.t1 | MTR_3g452380 | 33.514 | 185 | 84 | 3 | 1 | 185 | 16 | 161 | 7.34e-23 | 92.4 |
MS.gene059525.t1 | MTR_8g033270 | 32.620 | 187 | 83 | 3 | 1 | 185 | 1 | 146 | 8.56e-23 | 92.4 |
MS.gene059525.t1 | MTR_7g016600 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.75e-22 | 91.7 |
MS.gene059525.t1 | MTR_2g017865 | 58.571 | 70 | 28 | 1 | 1 | 70 | 16 | 84 | 2.40e-22 | 91.3 |
MS.gene059525.t1 | MTR_2g009890 | 34.921 | 189 | 83 | 4 | 1 | 189 | 1 | 149 | 3.08e-22 | 91.7 |
MS.gene059525.t1 | MTR_8g097090 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 3.41e-22 | 90.5 |
MS.gene059525.t1 | MTR_6g015975 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 7.63e-22 | 89.7 |
MS.gene059525.t1 | MTR_3g084980 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 7.84e-22 | 89.7 |
MS.gene059525.t1 | MTR_4g109830 | 30.526 | 190 | 94 | 2 | 1 | 190 | 1 | 152 | 9.30e-22 | 89.4 |
MS.gene059525.t1 | MTR_5g046790 | 31.053 | 190 | 93 | 2 | 1 | 190 | 1 | 152 | 1.31e-21 | 88.6 |
MS.gene059525.t1 | MTR_8g087860 | 67.241 | 58 | 19 | 0 | 1 | 58 | 17 | 74 | 1.48e-21 | 89.0 |
MS.gene059525.t1 | MTR_4g109810 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.71e-21 | 89.0 |
MS.gene059525.t1 | MTR_8g033220 | 53.165 | 79 | 32 | 1 | 1 | 74 | 1 | 79 | 5.15e-21 | 87.0 |
MS.gene059525.t1 | MTR_8g033220 | 53.165 | 79 | 32 | 1 | 1 | 74 | 1 | 79 | 6.62e-21 | 87.0 |
MS.gene059525.t1 | MTR_1g053070 | 56.944 | 72 | 30 | 1 | 1 | 72 | 1 | 71 | 7.67e-21 | 87.0 |
MS.gene059525.t1 | MTR_3g088615 | 54.930 | 71 | 31 | 1 | 1 | 70 | 1 | 71 | 7.92e-21 | 85.5 |
MS.gene059525.t1 | MTR_8g066260 | 30.000 | 190 | 95 | 2 | 1 | 190 | 1 | 152 | 8.66e-21 | 87.0 |
MS.gene059525.t1 | MTR_0003s0590 | 51.163 | 86 | 37 | 2 | 1 | 84 | 1 | 83 | 2.05e-20 | 86.3 |
MS.gene059525.t1 | MTR_5g031000 | 33.862 | 189 | 84 | 4 | 1 | 189 | 1 | 148 | 3.68e-20 | 84.7 |
MS.gene059525.t1 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 4.90e-20 | 84.7 |
MS.gene059525.t1 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 4.91e-20 | 84.7 |
MS.gene059525.t1 | MTR_5g031000 | 33.862 | 189 | 84 | 4 | 1 | 189 | 1 | 148 | 5.62e-20 | 84.7 |
MS.gene059525.t1 | MTR_4g102530 | 57.143 | 70 | 29 | 1 | 1 | 70 | 1 | 69 | 5.87e-20 | 84.0 |
MS.gene059525.t1 | MTR_2g461710 | 56.897 | 58 | 25 | 0 | 1 | 58 | 1 | 58 | 1.38e-19 | 79.0 |
MS.gene059525.t1 | MTR_6g464720 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 1.49e-19 | 84.0 |
MS.gene059525.t1 | MTR_3g113030 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 1.92e-19 | 83.2 |
MS.gene059525.t1 | MTR_5g032520 | 35.359 | 181 | 78 | 5 | 1 | 181 | 1 | 142 | 4.43e-19 | 82.0 |
MS.gene059525.t1 | MTR_5g045560 | 38.211 | 123 | 62 | 3 | 1 | 123 | 8 | 116 | 7.92e-19 | 81.6 |
MS.gene059525.t1 | MTR_1g038300 | 29.557 | 203 | 114 | 7 | 1 | 197 | 1 | 180 | 9.13e-19 | 81.3 |
MS.gene059525.t1 | MTR_4g093030 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 9.99e-19 | 79.7 |
MS.gene059525.t1 | MTR_8g086290 | 50.704 | 71 | 34 | 1 | 2 | 72 | 12 | 81 | 1.63e-18 | 79.3 |
MS.gene059525.t1 | MTR_5g032150 | 62.069 | 58 | 22 | 0 | 1 | 58 | 1 | 58 | 2.12e-18 | 80.1 |
MS.gene059525.t1 | MTR_1g029670 | 50.704 | 71 | 34 | 1 | 1 | 70 | 1 | 71 | 2.76e-18 | 79.0 |
MS.gene059525.t1 | MTR_4g036050 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 3.35e-18 | 78.6 |
MS.gene059525.t1 | MTR_1g101970 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 3.62e-18 | 79.0 |
MS.gene059525.t1 | MTR_4g036050 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 4.28e-18 | 78.6 |
MS.gene059525.t1 | MTR_4g036050 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 4.37e-18 | 78.6 |
MS.gene059525.t1 | MTR_1g108580 | 43.529 | 85 | 47 | 1 | 2 | 86 | 9 | 92 | 4.49e-18 | 79.3 |
MS.gene059525.t1 | MTR_8g051580 | 31.707 | 164 | 78 | 4 | 1 | 164 | 1 | 130 | 6.19e-18 | 78.2 |
MS.gene059525.t1 | MTR_4g036050 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 6.28e-18 | 78.6 |
MS.gene059525.t1 | MTR_3g052920 | 51.316 | 76 | 35 | 2 | 2 | 76 | 9 | 83 | 6.63e-18 | 79.0 |
MS.gene059525.t1 | MTR_5g066180 | 48.571 | 70 | 35 | 1 | 1 | 70 | 1 | 69 | 1.19e-17 | 78.2 |
MS.gene059525.t1 | MTR_8g043650 | 48.684 | 76 | 37 | 2 | 2 | 76 | 9 | 83 | 1.38e-17 | 78.2 |
MS.gene059525.t1 | MTR_2g085280 | 46.667 | 90 | 46 | 2 | 2 | 91 | 9 | 96 | 1.90e-17 | 77.8 |
MS.gene059525.t1 | MTR_2g085250 | 46.667 | 90 | 46 | 2 | 2 | 91 | 9 | 96 | 1.90e-17 | 77.8 |
MS.gene059525.t1 | MTR_1g105910 | 47.368 | 76 | 38 | 2 | 2 | 76 | 9 | 83 | 2.26e-17 | 77.8 |
MS.gene059525.t1 | MTR_1g108510 | 48.684 | 76 | 37 | 2 | 2 | 76 | 9 | 83 | 2.66e-17 | 77.4 |
MS.gene059525.t1 | MTR_2g030740 | 48.684 | 76 | 37 | 2 | 2 | 76 | 9 | 83 | 3.35e-17 | 77.4 |
MS.gene059525.t1 | MTR_3g030770 | 48.684 | 76 | 37 | 2 | 2 | 76 | 9 | 83 | 3.41e-17 | 77.0 |
MS.gene059525.t1 | MTR_3g052870 | 47.368 | 76 | 38 | 2 | 2 | 76 | 9 | 83 | 3.93e-17 | 76.6 |
MS.gene059525.t1 | MTR_5g066960 | 54.098 | 61 | 28 | 0 | 1 | 61 | 1 | 61 | 4.17e-17 | 72.4 |
MS.gene059525.t1 | MTR_1g105920 | 47.368 | 76 | 38 | 2 | 2 | 76 | 9 | 83 | 4.70e-17 | 77.0 |
MS.gene059525.t1 | MTR_1g054265 | 46.575 | 73 | 38 | 1 | 1 | 73 | 1 | 72 | 6.61e-17 | 75.1 |
MS.gene059525.t1 | MTR_1g077360 | 50.000 | 76 | 36 | 2 | 2 | 76 | 9 | 83 | 6.95e-17 | 76.3 |
MS.gene059525.t1 | MTR_2g105290 | 50.704 | 71 | 34 | 1 | 1 | 71 | 11 | 80 | 6.97e-17 | 75.1 |
MS.gene059525.t1 | MTR_4g131030 | 52.113 | 71 | 33 | 1 | 1 | 71 | 1 | 70 | 1.28e-16 | 75.1 |
MS.gene059525.t1 | MTR_7g028448 | 35.385 | 130 | 77 | 3 | 16 | 145 | 26 | 148 | 1.68e-16 | 73.9 |
MS.gene059525.t1 | MTR_4g036915 | 35.385 | 130 | 77 | 3 | 16 | 145 | 26 | 148 | 1.68e-16 | 73.9 |
MS.gene059525.t1 | MTR_1g041615 | 52.941 | 68 | 29 | 1 | 13 | 77 | 17 | 84 | 1.74e-16 | 73.2 |
MS.gene059525.t1 | MTR_1g106070 | 41.176 | 85 | 49 | 1 | 2 | 86 | 9 | 92 | 1.98e-16 | 73.9 |
MS.gene059525.t1 | MTR_1g012570 | 47.887 | 71 | 36 | 1 | 2 | 72 | 9 | 78 | 3.05e-16 | 74.7 |
MS.gene059525.t1 | MTR_2g093190 | 42.353 | 85 | 48 | 1 | 2 | 86 | 9 | 92 | 3.58e-16 | 74.3 |
MS.gene059525.t1 | MTR_1g075600 | 50.000 | 76 | 36 | 2 | 2 | 76 | 9 | 83 | 3.60e-16 | 74.3 |
MS.gene059525.t1 | MTR_4g093970 | 55.932 | 59 | 26 | 0 | 1 | 59 | 27 | 85 | 4.79e-16 | 74.3 |
MS.gene059525.t1 | MTR_5g055100 | 49.367 | 79 | 38 | 2 | 2 | 79 | 9 | 86 | 5.94e-16 | 73.9 |
MS.gene059525.t1 | MTR_8g079502 | 47.887 | 71 | 36 | 1 | 1 | 71 | 1 | 70 | 6.50e-16 | 72.8 |
MS.gene059525.t1 | MTR_1g063160 | 46.575 | 73 | 38 | 1 | 1 | 73 | 1 | 72 | 7.31e-16 | 72.4 |
MS.gene059525.t1 | MTR_3g030780 | 41.111 | 90 | 49 | 4 | 2 | 90 | 9 | 95 | 8.29e-16 | 71.2 |
MS.gene059525.t1 | MTR_3g080940 | 44.872 | 78 | 41 | 2 | 1 | 77 | 8 | 84 | 1.18e-15 | 72.4 |
MS.gene059525.t1 | MTR_1g047550 | 45.783 | 83 | 41 | 2 | 1 | 83 | 1 | 79 | 1.28e-15 | 71.6 |
MS.gene059525.t1 | MTR_0121s0100 | 40.000 | 85 | 50 | 1 | 2 | 86 | 9 | 92 | 2.11e-15 | 70.1 |
MS.gene059525.t1 | MTR_0121s0080 | 46.053 | 76 | 39 | 2 | 2 | 76 | 9 | 83 | 6.21e-15 | 71.2 |
MS.gene059525.t1 | MTR_5g053390 | 47.887 | 71 | 36 | 1 | 2 | 72 | 9 | 78 | 8.46e-15 | 70.9 |
MS.gene059525.t1 | MTR_8g046350 | 43.662 | 71 | 39 | 1 | 1 | 71 | 1 | 70 | 3.83e-14 | 67.4 |
MS.gene059525.t1 | MTR_4g127140 | 35.821 | 134 | 80 | 3 | 1 | 129 | 11 | 143 | 7.90e-14 | 67.0 |
MS.gene059525.t1 | MTR_4g094632 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 4.59e-13 | 64.7 |
MS.gene059525.t1 | MTR_4g094638 | 42.466 | 73 | 39 | 2 | 1 | 72 | 1 | 71 | 3.90e-12 | 62.4 |
MS.gene059525.t1 | MTR_1g105905 | 36.275 | 102 | 59 | 3 | 11 | 109 | 1 | 99 | 4.52e-12 | 63.2 |
MS.gene059525.t1 | MTR_6g018920 | 34.118 | 85 | 49 | 1 | 1 | 78 | 1 | 85 | 1.27e-11 | 62.8 |
MS.gene059525.t1 | MTR_7g062350 | 40.580 | 69 | 40 | 1 | 18 | 86 | 37 | 104 | 9.47e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059525.t1 | AT1G22130 | 64.646 | 198 | 70 | 0 | 1 | 198 | 1 | 198 | 3.08e-91 | 270 |
MS.gene059525.t1 | AT1G77980 | 66.332 | 199 | 66 | 1 | 1 | 198 | 1 | 199 | 2.38e-90 | 268 |
MS.gene059525.t1 | AT1G77950 | 62.032 | 187 | 69 | 1 | 1 | 185 | 1 | 187 | 3.12e-81 | 242 |
MS.gene059525.t1 | AT1G77950 | 62.032 | 187 | 69 | 1 | 1 | 185 | 1 | 187 | 3.12e-81 | 242 |
MS.gene059525.t1 | AT1G77950 | 62.032 | 187 | 69 | 1 | 1 | 185 | 1 | 187 | 3.12e-81 | 242 |
MS.gene059525.t1 | AT1G77950 | 62.032 | 187 | 69 | 1 | 1 | 185 | 1 | 187 | 3.12e-81 | 242 |
MS.gene059525.t1 | AT1G18750 | 44.681 | 141 | 64 | 4 | 1 | 140 | 1 | 128 | 2.32e-29 | 112 |
MS.gene059525.t1 | AT1G18750 | 44.681 | 141 | 64 | 4 | 1 | 140 | 1 | 128 | 2.63e-29 | 112 |
MS.gene059525.t1 | AT2G03060 | 36.757 | 185 | 102 | 4 | 1 | 184 | 1 | 171 | 1.62e-28 | 110 |
MS.gene059525.t1 | AT2G03060 | 36.757 | 185 | 102 | 4 | 1 | 184 | 1 | 171 | 1.62e-28 | 110 |
MS.gene059525.t1 | AT2G03060 | 36.757 | 185 | 102 | 4 | 1 | 184 | 1 | 171 | 1.62e-28 | 110 |
MS.gene059525.t1 | AT2G03060 | 36.757 | 185 | 102 | 4 | 1 | 184 | 1 | 171 | 1.64e-28 | 110 |
MS.gene059525.t1 | AT4G37435 | 34.359 | 195 | 107 | 4 | 1 | 191 | 1 | 178 | 1.54e-27 | 103 |
MS.gene059525.t1 | AT1G18750 | 47.414 | 116 | 48 | 3 | 1 | 115 | 1 | 104 | 2.65e-27 | 107 |
MS.gene059525.t1 | AT1G69540 | 33.152 | 184 | 110 | 3 | 1 | 184 | 1 | 171 | 1.57e-24 | 99.0 |
MS.gene059525.t1 | AT1G69540 | 33.152 | 184 | 110 | 3 | 1 | 184 | 1 | 171 | 1.77e-24 | 98.6 |
MS.gene059525.t1 | AT4G09960 | 33.333 | 186 | 83 | 3 | 1 | 185 | 1 | 146 | 4.19e-24 | 95.5 |
MS.gene059525.t1 | AT4G09960 | 33.333 | 186 | 83 | 3 | 1 | 185 | 2 | 147 | 4.28e-24 | 95.5 |
MS.gene059525.t1 | AT4G09960 | 33.511 | 188 | 84 | 3 | 1 | 187 | 1 | 148 | 5.27e-24 | 94.7 |
MS.gene059525.t1 | AT4G09960 | 33.333 | 186 | 83 | 3 | 1 | 185 | 11 | 156 | 6.69e-24 | 95.1 |
MS.gene059525.t1 | AT1G26310 | 33.158 | 190 | 91 | 3 | 1 | 190 | 1 | 154 | 8.86e-24 | 95.1 |
MS.gene059525.t1 | AT4G09960 | 33.333 | 186 | 83 | 3 | 1 | 185 | 27 | 172 | 1.45e-23 | 94.7 |
MS.gene059525.t1 | AT5G13790 | 35.417 | 192 | 75 | 4 | 1 | 189 | 1 | 146 | 2.82e-23 | 94.4 |
MS.gene059525.t1 | AT5G62165 | 32.632 | 190 | 87 | 4 | 1 | 189 | 1 | 150 | 2.98e-23 | 91.3 |
MS.gene059525.t1 | AT5G62165 | 32.632 | 190 | 87 | 4 | 1 | 189 | 1 | 150 | 2.98e-23 | 91.3 |
MS.gene059525.t1 | AT5G62165 | 32.632 | 190 | 87 | 4 | 1 | 189 | 1 | 150 | 2.98e-23 | 91.3 |
MS.gene059525.t1 | AT4G09960 | 32.973 | 185 | 85 | 3 | 1 | 185 | 96 | 241 | 4.59e-23 | 94.7 |
MS.gene059525.t1 | AT2G45650 | 61.429 | 70 | 26 | 1 | 1 | 70 | 1 | 69 | 5.94e-23 | 92.8 |
MS.gene059525.t1 | AT5G13790 | 34.921 | 189 | 77 | 3 | 1 | 189 | 1 | 143 | 7.92e-23 | 92.8 |
MS.gene059525.t1 | AT1G24260 | 35.393 | 178 | 98 | 6 | 1 | 173 | 1 | 166 | 1.11e-22 | 92.0 |
MS.gene059525.t1 | AT5G51870 | 33.155 | 187 | 87 | 4 | 1 | 187 | 1 | 149 | 1.31e-22 | 90.1 |
MS.gene059525.t1 | AT1G24260 | 35.196 | 179 | 98 | 6 | 1 | 173 | 1 | 167 | 1.44e-22 | 92.0 |
MS.gene059525.t1 | AT5G62165 | 32.105 | 190 | 88 | 4 | 1 | 189 | 1 | 150 | 1.47e-22 | 89.4 |
MS.gene059525.t1 | AT5G62165 | 32.105 | 190 | 88 | 4 | 1 | 189 | 1 | 150 | 1.47e-22 | 89.4 |
MS.gene059525.t1 | AT5G62165 | 32.105 | 190 | 88 | 4 | 1 | 189 | 1 | 150 | 1.47e-22 | 89.4 |
MS.gene059525.t1 | AT5G62165 | 32.105 | 190 | 88 | 4 | 1 | 189 | 1 | 150 | 1.47e-22 | 89.4 |
MS.gene059525.t1 | AT5G62165 | 32.105 | 190 | 88 | 4 | 1 | 189 | 1 | 150 | 1.47e-22 | 89.4 |
MS.gene059525.t1 | AT1G69120 | 32.432 | 185 | 87 | 2 | 1 | 185 | 1 | 147 | 1.55e-22 | 91.3 |
MS.gene059525.t1 | AT3G58780 | 32.432 | 185 | 86 | 3 | 1 | 185 | 16 | 161 | 1.69e-22 | 91.7 |
MS.gene059525.t1 | AT3G58780 | 32.432 | 185 | 86 | 3 | 1 | 185 | 22 | 167 | 1.87e-22 | 91.7 |
MS.gene059525.t1 | AT5G62165 | 32.663 | 199 | 92 | 5 | 1 | 197 | 1 | 159 | 1.95e-22 | 90.1 |
MS.gene059525.t1 | AT5G62165 | 32.663 | 199 | 92 | 5 | 1 | 197 | 1 | 159 | 1.95e-22 | 90.1 |
MS.gene059525.t1 | AT4G11880 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 2.04e-22 | 89.7 |
MS.gene059525.t1 | AT4G11880 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 2.04e-22 | 89.7 |
MS.gene059525.t1 | AT1G69120 | 32.432 | 185 | 87 | 2 | 1 | 185 | 1 | 147 | 2.04e-22 | 91.7 |
MS.gene059525.t1 | AT4G18960 | 34.054 | 185 | 81 | 3 | 2 | 185 | 18 | 162 | 2.06e-22 | 91.7 |
MS.gene059525.t1 | AT4G22950 | 32.432 | 185 | 85 | 2 | 1 | 185 | 1 | 145 | 2.85e-22 | 89.4 |
MS.gene059525.t1 | AT5G62165 | 31.343 | 201 | 97 | 4 | 1 | 200 | 1 | 161 | 2.86e-22 | 90.1 |
MS.gene059525.t1 | AT5G62165 | 31.343 | 201 | 97 | 4 | 1 | 200 | 1 | 161 | 2.86e-22 | 90.1 |
MS.gene059525.t1 | AT5G62165 | 31.343 | 201 | 97 | 4 | 1 | 200 | 1 | 161 | 2.86e-22 | 90.1 |
MS.gene059525.t1 | AT3G58780 | 32.973 | 185 | 110 | 3 | 1 | 185 | 16 | 186 | 3.13e-22 | 91.3 |
MS.gene059525.t1 | AT5G15800 | 34.973 | 183 | 90 | 5 | 1 | 173 | 1 | 164 | 3.18e-22 | 90.9 |
MS.gene059525.t1 | AT5G51870 | 32.979 | 188 | 88 | 4 | 1 | 188 | 24 | 173 | 3.84e-22 | 89.4 |
MS.gene059525.t1 | AT5G51870 | 32.804 | 189 | 89 | 4 | 1 | 189 | 1 | 151 | 4.13e-22 | 89.7 |
MS.gene059525.t1 | AT5G15800 | 34.973 | 183 | 90 | 5 | 1 | 173 | 1 | 164 | 4.20e-22 | 90.9 |
MS.gene059525.t1 | AT3G58780 | 31.892 | 185 | 80 | 2 | 1 | 185 | 16 | 154 | 4.95e-22 | 90.1 |
MS.gene059525.t1 | AT4G11880 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 5.04e-22 | 89.7 |
MS.gene059525.t1 | AT4G11880 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 5.04e-22 | 89.7 |
MS.gene059525.t1 | AT1G24260 | 32.105 | 190 | 94 | 3 | 1 | 190 | 1 | 155 | 5.20e-22 | 90.1 |
MS.gene059525.t1 | AT2G42830 | 31.892 | 185 | 87 | 3 | 1 | 185 | 16 | 161 | 8.43e-22 | 89.7 |
MS.gene059525.t1 | AT2G42830 | 31.892 | 185 | 87 | 3 | 1 | 185 | 16 | 161 | 8.92e-22 | 89.7 |
MS.gene059525.t1 | AT3G02310 | 33.673 | 196 | 100 | 6 | 1 | 186 | 1 | 176 | 9.38e-22 | 88.6 |
MS.gene059525.t1 | AT3G61120 | 32.979 | 188 | 79 | 3 | 1 | 185 | 1 | 144 | 1.03e-21 | 89.4 |
MS.gene059525.t1 | AT5G51870 | 32.804 | 189 | 89 | 4 | 1 | 189 | 1 | 151 | 1.06e-21 | 89.0 |
MS.gene059525.t1 | AT2G45660 | 53.521 | 71 | 32 | 1 | 1 | 71 | 1 | 70 | 1.32e-21 | 87.0 |
MS.gene059525.t1 | AT5G51870 | 32.804 | 189 | 89 | 4 | 1 | 189 | 11 | 161 | 1.41e-21 | 89.0 |
MS.gene059525.t1 | AT4G22950 | 33.514 | 185 | 83 | 3 | 1 | 185 | 1 | 145 | 1.60e-21 | 88.6 |
MS.gene059525.t1 | AT4G22950 | 33.514 | 185 | 83 | 3 | 1 | 185 | 1 | 145 | 1.60e-21 | 88.6 |
MS.gene059525.t1 | AT3G57230 | 33.514 | 185 | 83 | 3 | 1 | 185 | 1 | 145 | 1.67e-21 | 89.0 |
MS.gene059525.t1 | AT3G57230 | 33.514 | 185 | 83 | 3 | 1 | 185 | 1 | 145 | 1.67e-21 | 89.0 |
MS.gene059525.t1 | AT3G57390 | 34.921 | 189 | 91 | 5 | 1 | 189 | 1 | 157 | 2.09e-21 | 88.2 |
MS.gene059525.t1 | AT2G03710 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.28e-21 | 87.0 |
MS.gene059525.t1 | AT2G45660 | 53.521 | 71 | 32 | 1 | 1 | 71 | 1 | 70 | 2.84e-21 | 87.8 |
MS.gene059525.t1 | AT5G60910 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 3.02e-21 | 88.2 |
MS.gene059525.t1 | AT3G02310 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 3.24e-21 | 88.2 |
MS.gene059525.t1 | AT3G57390 | 34.921 | 189 | 91 | 5 | 1 | 189 | 1 | 157 | 3.45e-21 | 88.2 |
MS.gene059525.t1 | AT5G10140 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 3.49e-21 | 86.3 |
MS.gene059525.t1 | AT3G30260 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 3.76e-21 | 88.2 |
MS.gene059525.t1 | AT3G54340 | 44.545 | 110 | 54 | 2 | 1 | 109 | 1 | 104 | 4.31e-21 | 87.4 |
MS.gene059525.t1 | AT5G10140 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 4.49e-21 | 86.3 |
MS.gene059525.t1 | AT3G58780 | 57.143 | 70 | 29 | 1 | 1 | 70 | 16 | 84 | 4.51e-21 | 88.6 |
MS.gene059525.t1 | AT5G23260 | 31.633 | 196 | 89 | 4 | 1 | 192 | 1 | 155 | 4.93e-21 | 87.4 |
MS.gene059525.t1 | AT5G10140 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 5.07e-21 | 86.7 |
MS.gene059525.t1 | AT2G03710 | 60.870 | 69 | 23 | 1 | 1 | 65 | 1 | 69 | 5.24e-21 | 87.8 |
MS.gene059525.t1 | AT2G03710 | 60.870 | 69 | 23 | 1 | 1 | 65 | 1 | 69 | 5.42e-21 | 87.8 |
MS.gene059525.t1 | AT5G10140 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 5.47e-21 | 86.3 |
MS.gene059525.t1 | AT3G57230 | 34.756 | 164 | 67 | 4 | 1 | 164 | 1 | 124 | 5.52e-21 | 85.1 |
MS.gene059525.t1 | AT5G23260 | 32.620 | 187 | 84 | 3 | 1 | 186 | 17 | 162 | 6.65e-21 | 87.8 |
MS.gene059525.t1 | AT4G24540 | 31.373 | 204 | 93 | 4 | 1 | 200 | 1 | 161 | 1.83e-20 | 85.5 |
MS.gene059525.t1 | AT5G23260 | 31.579 | 190 | 88 | 3 | 1 | 189 | 1 | 149 | 2.44e-20 | 85.9 |
MS.gene059525.t1 | AT5G23260 | 31.579 | 190 | 88 | 3 | 1 | 189 | 17 | 165 | 3.37e-20 | 85.9 |
MS.gene059525.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 3.61e-20 | 82.8 |
MS.gene059525.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 4.74e-20 | 84.0 |
MS.gene059525.t1 | AT4G37940 | 34.595 | 185 | 81 | 4 | 1 | 185 | 1 | 145 | 5.35e-20 | 84.7 |
MS.gene059525.t1 | AT5G62165 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 6.45e-20 | 81.3 |
MS.gene059525.t1 | AT1G71692 | 44.444 | 81 | 45 | 0 | 1 | 81 | 1 | 81 | 9.11e-20 | 83.6 |
MS.gene059525.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.34e-19 | 83.6 |
MS.gene059525.t1 | AT5G65070 | 59.155 | 71 | 28 | 1 | 1 | 70 | 1 | 71 | 1.41e-19 | 83.6 |
MS.gene059525.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.54e-19 | 82.8 |
MS.gene059525.t1 | AT2G14210 | 32.804 | 189 | 88 | 2 | 1 | 189 | 1 | 150 | 1.02e-18 | 81.3 |
MS.gene059525.t1 | AT2G14210 | 32.804 | 189 | 88 | 2 | 1 | 189 | 1 | 150 | 1.07e-18 | 81.3 |
MS.gene059525.t1 | AT4G37940 | 31.980 | 197 | 90 | 5 | 1 | 197 | 1 | 153 | 1.44e-18 | 79.7 |
MS.gene059525.t1 | AT4G37940 | 32.796 | 186 | 85 | 4 | 1 | 186 | 1 | 146 | 2.39e-18 | 79.7 |
MS.gene059525.t1 | AT5G65050 | 36.250 | 160 | 86 | 5 | 1 | 149 | 1 | 155 | 3.45e-18 | 79.0 |
MS.gene059525.t1 | AT1G31140 | 39.815 | 108 | 64 | 1 | 1 | 107 | 1 | 108 | 4.64e-18 | 79.3 |
MS.gene059525.t1 | AT2G22540 | 29.500 | 200 | 102 | 4 | 1 | 200 | 1 | 161 | 8.67e-18 | 79.0 |
MS.gene059525.t1 | AT2G22540 | 29.500 | 200 | 102 | 4 | 1 | 200 | 1 | 161 | 8.67e-18 | 79.0 |
MS.gene059525.t1 | AT5G65050 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 9.06e-18 | 77.4 |
MS.gene059525.t1 | AT2G22630 | 30.688 | 189 | 91 | 4 | 1 | 189 | 1 | 149 | 9.16e-18 | 78.6 |
MS.gene059525.t1 | AT2G22630 | 30.688 | 189 | 91 | 4 | 1 | 189 | 1 | 149 | 9.16e-18 | 78.6 |
MS.gene059525.t1 | AT5G51860 | 52.857 | 70 | 32 | 1 | 1 | 70 | 1 | 69 | 1.44e-17 | 77.4 |
MS.gene059525.t1 | AT5G20240 | 61.111 | 54 | 21 | 0 | 1 | 54 | 1 | 54 | 1.45e-17 | 76.3 |
MS.gene059525.t1 | AT5G51860 | 34.940 | 166 | 91 | 7 | 1 | 159 | 1 | 156 | 1.85e-17 | 77.4 |
MS.gene059525.t1 | AT5G65050 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 2.25e-17 | 77.0 |
MS.gene059525.t1 | AT5G65050 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 2.53e-17 | 76.6 |
MS.gene059525.t1 | AT1G31140 | 39.815 | 108 | 62 | 2 | 1 | 107 | 1 | 106 | 2.54e-17 | 77.0 |
MS.gene059525.t1 | AT5G20240 | 61.111 | 54 | 21 | 0 | 1 | 54 | 1 | 54 | 3.20e-17 | 76.6 |
MS.gene059525.t1 | AT2G22540 | 59.259 | 54 | 22 | 0 | 1 | 54 | 1 | 54 | 1.23e-16 | 75.9 |
MS.gene059525.t1 | AT5G65060 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 2.83e-16 | 73.9 |
MS.gene059525.t1 | AT5G65060 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 3.10e-16 | 73.6 |
MS.gene059525.t1 | AT5G65060 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 3.63e-16 | 73.6 |
MS.gene059525.t1 | AT5G65080 | 47.143 | 70 | 37 | 0 | 1 | 70 | 8 | 77 | 1.13e-15 | 72.4 |
MS.gene059525.t1 | AT5G65080 | 56.452 | 62 | 26 | 1 | 1 | 61 | 8 | 69 | 6.17e-15 | 70.5 |
MS.gene059525.t1 | AT5G60440 | 41.463 | 82 | 44 | 2 | 2 | 80 | 7 | 87 | 8.10e-15 | 71.6 |
MS.gene059525.t1 | AT2G26320 | 43.750 | 80 | 44 | 1 | 1 | 79 | 17 | 96 | 1.03e-14 | 67.8 |
MS.gene059525.t1 | AT2G24840 | 45.833 | 72 | 38 | 1 | 1 | 72 | 62 | 132 | 3.16e-14 | 69.7 |
MS.gene059525.t1 | AT3G66656 | 41.667 | 72 | 41 | 1 | 1 | 72 | 1 | 71 | 4.40e-14 | 67.8 |
MS.gene059525.t1 | AT1G47760 | 45.833 | 72 | 38 | 1 | 1 | 72 | 1 | 71 | 5.98e-14 | 67.4 |
MS.gene059525.t1 | AT1G77080 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 7.73e-14 | 67.0 |
MS.gene059525.t1 | AT1G77080 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 9.36e-14 | 66.6 |
MS.gene059525.t1 | AT1G01530 | 41.573 | 89 | 43 | 2 | 1 | 86 | 6 | 88 | 9.85e-14 | 68.2 |
MS.gene059525.t1 | AT1G77080 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 1.44e-13 | 66.6 |
MS.gene059525.t1 | AT1G77080 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 3.70e-13 | 66.2 |
MS.gene059525.t1 | AT4G36590 | 46.479 | 71 | 37 | 1 | 2 | 72 | 7 | 76 | 5.51e-13 | 65.9 |
MS.gene059525.t1 | AT1G77080 | 75.000 | 40 | 10 | 0 | 1 | 40 | 1 | 40 | 5.76e-13 | 63.9 |
MS.gene059525.t1 | AT2G34440 | 39.437 | 71 | 42 | 1 | 1 | 71 | 1 | 70 | 6.34e-13 | 64.3 |
MS.gene059525.t1 | AT1G77080 | 75.000 | 40 | 10 | 0 | 1 | 40 | 1 | 40 | 1.12e-12 | 64.3 |
MS.gene059525.t1 | AT1G72350 | 54.386 | 57 | 26 | 0 | 2 | 58 | 43 | 99 | 3.07e-12 | 63.5 |
Find 29 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATAGATGTCATCTTTAA+TGG | 0.141436 | 4.4:-27689766 | None:intergenic |
GAACATACTTATCTCTTTCT+TGG | 0.254516 | 4.4:-27688563 | None:intergenic |
GATGTCATCTTTAATGGTTC+GGG | 0.293236 | 4.4:-27689760 | None:intergenic |
GTATGATCCATCAGCTATTC+AGG | 0.315118 | 4.4:+27690007 | MS.gene059525:CDS |
AAATGGTAGAGGAGCAAATA+AGG | 0.337725 | 4.4:+27689619 | MS.gene059525:CDS |
AGATGTCATCTTTAATGGTT+CGG | 0.344352 | 4.4:-27689761 | None:intergenic |
AAATGATTAAGACGATTTGA+TGG | 0.363568 | 4.4:-27687929 | None:intergenic |
TACTTATCTCTTTCTTGGTC+AGG | 0.364285 | 4.4:-27688558 | None:intergenic |
GTAATCTACTAACTTCTTGT+TGG | 0.390980 | 4.4:-27689584 | None:intergenic |
TTACGAACTTGGACATATGA+AGG | 0.447873 | 4.4:-27689266 | None:intergenic |
ACATATTCAAAACGTAGAAA+TGG | 0.460629 | 4.4:+27687839 | MS.gene059525:CDS |
AGAAACCTTGGCACGTGTCA+TGG | 0.475032 | 4.4:+27689819 | MS.gene059525:CDS |
ATTACAACAACAACTTCAAA+TGG | 0.479837 | 4.4:+27689602 | MS.gene059525:CDS |
TACCTTCGGTAGGGTAGCTC+AGG | 0.489363 | 4.4:-27688704 | None:intergenic |
TCTATAGCAGAGCTTGAAAC+CGG | 0.508243 | 4.4:+27689781 | MS.gene059525:CDS |
TTAATTACCTGAATAGCTGA+TGG | 0.509027 | 4.4:-27690014 | None:intergenic |
GGCACGTGTCATGGAGAGAA+AGG | 0.531286 | 4.4:+27689828 | MS.gene059525:CDS |
TCTCTCCATGACACGTGCCA+AGG | 0.532693 | 4.4:-27689824 | None:intergenic |
TCAGGGTACTTCAGCAGTTG+AGG | 0.541962 | 4.4:+27689226 | MS.gene059525:CDS |
AGACATGAACTCTGAGGTTG+AGG | 0.553786 | 4.4:+27689421 | MS.gene059525:CDS |
TTGCAGGGGTATTCAGAGCA+AGG | 0.557352 | 4.4:+27688917 | MS.gene059525:intron |
TACGAACTTGGACATATGAA+GGG | 0.559614 | 4.4:-27689265 | None:intergenic |
TCTGAGAGTATACCTTCGGT+AGG | 0.566583 | 4.4:-27688714 | None:intergenic |
ACAACAACTTCAAATGGTAG+AGG | 0.593286 | 4.4:+27689608 | MS.gene059525:CDS |
CTGAGAGTATACCTTCGGTA+GGG | 0.605428 | 4.4:-27688713 | None:intergenic |
TTCCTGAGCTACCCTACCGA+AGG | 0.607215 | 4.4:+27688702 | MS.gene059525:CDS |
GAGCAATATCAATATCACAA+AGG | 0.664332 | 4.4:-27687892 | None:intergenic |
CAGGGGTATTCAGAGCAAGG+AGG | 0.704327 | 4.4:+27688920 | MS.gene059525:intron |
TTCGGGAGACATGAACTCTG+AGG | 0.722763 | 4.4:+27689415 | MS.gene059525:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAATAATTAAAATATTT+TGG | - | chr4.4:27689692-27689711 | None:intergenic | 0.0% |
!! | AAATTAATTCACTTTATAAT+TGG | - | chr4.4:27688321-27688340 | None:intergenic | 10.0% |
!! | ATTACTTTATATTAGAATTT+AGG | + | chr4.4:27689317-27689336 | MS.gene059525:intron | 10.0% |
!! | TATTTATTTATTTATTTGCA+GGG | + | chr4.4:27688902-27688921 | MS.gene059525:intron | 10.0% |
!! | TTATTTATTTATTTATTTGC+AGG | + | chr4.4:27688901-27688920 | MS.gene059525:intron | 10.0% |
!!! | TCTTCATTTTTTTATTTTTT+GGG | + | chr4.4:27689884-27689903 | MS.gene059525:intron | 10.0% |
!!! | TTACATAATATAATTTTGAA+GGG | - | chr4.4:27689500-27689519 | None:intergenic | 10.0% |
!!! | TTCTTCATTTTTTTATTTTT+TGG | + | chr4.4:27689883-27689902 | MS.gene059525:intron | 10.0% |
!!! | TTGATAGTTTATTTATATAT+GGG | + | chr4.4:27689915-27689934 | MS.gene059525:intron | 10.0% |
!!! | TTTGATAGTTTATTTATATA+TGG | + | chr4.4:27689914-27689933 | MS.gene059525:intron | 10.0% |
!! | AAAGTTATTATACACATTAT+TGG | + | chr4.4:27689054-27689073 | MS.gene059525:intron | 15.0% |
!! | AATAAAGTTATTATACACTA+TGG | - | chr4.4:27688442-27688461 | None:intergenic | 15.0% |
!! | ATTTATTTATTTATTTGCAG+GGG | + | chr4.4:27688903-27688922 | MS.gene059525:intron | 15.0% |
!! | TTTACAAACTATATATGTAT+TGG | + | chr4.4:27688007-27688026 | MS.gene059525:intron | 15.0% |
!!! | CTTCATTTTTTTATTTTTTG+GGG | + | chr4.4:27689885-27689904 | MS.gene059525:intron | 15.0% |
!!! | GTTACATAATATAATTTTGA+AGG | - | chr4.4:27689501-27689520 | None:intergenic | 15.0% |
!! | AAAAATTGTTCTAATGTTTG+GGG | + | chr4.4:27689714-27689733 | MS.gene059525:intron | 20.0% |
!! | AAAATATAACAACATCACTA+TGG | - | chr4.4:27688492-27688511 | None:intergenic | 20.0% |
!! | AAAATCTATCAAAAACAATC+AGG | - | chr4.4:27688080-27688099 | None:intergenic | 20.0% |
!! | AAACAATTAAGAAATGAAGA+AGG | - | chr4.4:27688780-27688799 | None:intergenic | 20.0% |
!! | AAATATAACAACATCACTAT+GGG | - | chr4.4:27688491-27688510 | None:intergenic | 20.0% |
!! | ATGTGACAAAGATTAATTAA+AGG | - | chr4.4:27688989-27689008 | None:intergenic | 20.0% |
!! | CAAAAATTGTTCTAATGTTT+GGG | + | chr4.4:27689713-27689732 | MS.gene059525:intron | 20.0% |
!! | GTATAATAACTTTATACTGA+CGG | - | chr4.4:27689047-27689066 | None:intergenic | 20.0% |
!! | TCAAAAATTGTTCTAATGTT+TGG | + | chr4.4:27689712-27689731 | MS.gene059525:intron | 20.0% |
!! | TTGAATAAAACCTATAGATT+AGG | + | chr4.4:27688288-27688307 | MS.gene059525:intron | 20.0% |
!!! | CATTTATGTTTTAGATACAA+TGG | + | chr4.4:27688153-27688172 | MS.gene059525:intron | 20.0% |
!!! | TATTCTTTTCTTTTCTTCTA+TGG | + | chr4.4:27688234-27688253 | MS.gene059525:intron | 20.0% |
! | AAAACATGCATGTTTATTCA+TGG | + | chr4.4:27689949-27689968 | MS.gene059525:intron | 25.0% |
! | AAATGATTAAGACGATTTGA+TGG | - | chr4.4:27687932-27687951 | None:intergenic | 25.0% |
! | AATTAGTAACAAAAGAGCAA+AGG | - | chr4.4:27688867-27688886 | None:intergenic | 25.0% |
! | ACATATTCAAAACGTAGAAA+TGG | + | chr4.4:27687839-27687858 | MS.gene059525:CDS | 25.0% |
! | AGAAGAAGAAAAATATGAAG+AGG | - | chr4.4:27687983-27688002 | None:intergenic | 25.0% |
! | ATTACAACAACAACTTCAAA+TGG | + | chr4.4:27689602-27689621 | MS.gene059525:CDS | 25.0% |
! | ATTTCACATATTTACGAACT+TGG | - | chr4.4:27689280-27689299 | None:intergenic | 25.0% |
! | CTAGTTAAGAAGAGAATTTA+AGG | - | chr4.4:27689559-27689578 | None:intergenic | 25.0% |
! | CTTAAATTCTCTTCTTAACT+AGG | + | chr4.4:27689557-27689576 | MS.gene059525:intron | 25.0% |
! | GAAGAAGAAAAATATGAAGA+GGG | - | chr4.4:27687982-27688001 | None:intergenic | 25.0% |
! | TAGATGAAACAATATAGGAA+AGG | - | chr4.4:27689381-27689400 | None:intergenic | 25.0% |
! | TGAAAACTTCTAAACACATT+AGG | + | chr4.4:27688625-27688644 | MS.gene059525:intron | 25.0% |
! | TTTCTCTAACATTTACTGAT+AGG | + | chr4.4:27688946-27688965 | MS.gene059525:intron | 25.0% |
!! | TTTCTTTTCTTCTATGGATT+AGG | + | chr4.4:27688240-27688259 | MS.gene059525:intron | 25.0% |
!!! | AATCGTCTTAATCATTTTTC+AGG | + | chr4.4:27687935-27687954 | MS.gene059525:CDS | 25.0% |
!!! | ATCATTTTTCAGGTAAAAGA+AGG | + | chr4.4:27687945-27687964 | MS.gene059525:CDS | 25.0% |
!!! | GTTATATTTTTGTTGTAAGC+AGG | + | chr4.4:27688502-27688521 | MS.gene059525:intron | 25.0% |
AAAAAACGTAGTAGAAACCT+TGG | + | chr4.4:27689807-27689826 | MS.gene059525:CDS | 30.0% | |
AGATGTCATCTTTAATGGTT+CGG | - | chr4.4:27689764-27689783 | None:intergenic | 30.0% | |
AGCAGTAGATGAAACAATAT+AGG | - | chr4.4:27689386-27689405 | None:intergenic | 30.0% | |
GAACATACTTATCTCTTTCT+TGG | - | chr4.4:27688566-27688585 | None:intergenic | 30.0% | |
GAGCAATATCAATATCACAA+AGG | - | chr4.4:27687895-27687914 | None:intergenic | 30.0% | |
GCTATAGATGTCATCTTTAA+TGG | - | chr4.4:27689769-27689788 | None:intergenic | 30.0% | |
GTAATCTACTAACTTCTTGT+TGG | - | chr4.4:27689587-27689606 | None:intergenic | 30.0% | |
TTAATTACCTGAATAGCTGA+TGG | - | chr4.4:27690017-27690036 | None:intergenic | 30.0% | |
!! | ATTTGACTTGAAATCATTGC+TGG | + | chr4.4:27688337-27688356 | MS.gene059525:intron | 30.0% |
!! | GTTTTAGATACAATGGTTTG+TGG | + | chr4.4:27688160-27688179 | MS.gene059525:intron | 30.0% |
!!! | TTCTACTACGTTTTTTTCAC+CGG | - | chr4.4:27689803-27689822 | None:intergenic | 30.0% |
AAATGGTAGAGGAGCAAATA+AGG | + | chr4.4:27689619-27689638 | MS.gene059525:CDS | 35.0% | |
AATTGTTCTAATGTTTGGGG+TGG | + | chr4.4:27689717-27689736 | MS.gene059525:intron | 35.0% | |
ACAACAACTTCAAATGGTAG+AGG | + | chr4.4:27689608-27689627 | MS.gene059525:CDS | 35.0% | |
ATGAAGAAGGAACAGAAGAA+TGG | - | chr4.4:27688767-27688786 | None:intergenic | 35.0% | |
CATCACTATGGGCATTATAT+TGG | - | chr4.4:27688480-27688499 | None:intergenic | 35.0% | |
GATGTCATCTTTAATGGTTC+GGG | - | chr4.4:27689763-27689782 | None:intergenic | 35.0% | |
TACGAACTTGGACATATGAA+GGG | - | chr4.4:27689268-27689287 | None:intergenic | 35.0% | |
TACTTATCTCTTTCTTGGTC+AGG | - | chr4.4:27688561-27688580 | None:intergenic | 35.0% | |
TCTACTGCTTCAATCAAGTT+CGG | + | chr4.4:27689397-27689416 | MS.gene059525:intron | 35.0% | |
TGAAGAAGGAACAGAAGAAT+GGG | - | chr4.4:27688766-27688785 | None:intergenic | 35.0% | |
TGGTCAAGATCCTAATCTAT+AGG | - | chr4.4:27688301-27688320 | None:intergenic | 35.0% | |
TTACGAACTTGGACATATGA+AGG | - | chr4.4:27689269-27689288 | None:intergenic | 35.0% | |
! | CATTTTGCAGTATTTGCTCA+GGG | + | chr4.4:27689209-27689228 | MS.gene059525:intron | 35.0% |
! | GATTTCTGAGAGTATACCTT+CGG | - | chr4.4:27688721-27688740 | None:intergenic | 35.0% |
! | GCTTTTGCAGTAAATTGTGA+AGG | - | chr4.4:27688363-27688382 | None:intergenic | 35.0% |
!! | TTTTGTTGTAAGCAGGATAG+AGG | + | chr4.4:27688509-27688528 | MS.gene059525:intron | 35.0% |
CTACTGCTTCAATCAAGTTC+GGG | + | chr4.4:27689398-27689417 | MS.gene059525:intron | 40.0% | |
CTGCAAAAGCAAATCATTGC+TGG | + | chr4.4:27688373-27688392 | MS.gene059525:intron | 40.0% | |
GCATGTTTATTCATGGTTGC+AGG | + | chr4.4:27689956-27689975 | MS.gene059525:intron | 40.0% | |
GTATGATCCATCAGCTATTC+AGG | + | chr4.4:27690007-27690026 | MS.gene059525:CDS | 40.0% | |
TCAAAAACAATCAGGCCTTG+AGG | - | chr4.4:27688072-27688091 | None:intergenic | 40.0% | |
TCTATAGCAGAGCTTGAAAC+CGG | + | chr4.4:27689781-27689800 | MS.gene059525:CDS | 40.0% | |
TCTCAGAAATCCTCTTCTCT+CGG | + | chr4.4:27688730-27688749 | MS.gene059525:intron | 40.0% | |
! | GCATTTTGCAGTATTTGCTC+AGG | + | chr4.4:27689208-27689227 | MS.gene059525:intron | 40.0% |
ACAGAAGAATGGGTGAGAGA+AGG | - | chr4.4:27688756-27688775 | None:intergenic | 45.0% | |
TTATGCCTCTTCTCTCCTCA+AGG | + | chr4.4:27688054-27688073 | MS.gene059525:intron | 45.0% | |
! | ACAATGGTTTGTGGCTCGTT+GGG | + | chr4.4:27688169-27688188 | MS.gene059525:intron | 45.0% |
! | CTGAGAGTATACCTTCGGTA+GGG | - | chr4.4:27688716-27688735 | None:intergenic | 45.0% |
! | TACAATGGTTTGTGGCTCGT+TGG | + | chr4.4:27688168-27688187 | MS.gene059525:intron | 45.0% |
! | TCTGAGAGTATACCTTCGGT+AGG | - | chr4.4:27688717-27688736 | None:intergenic | 45.0% |
! | TGTTTGGGGTGGATAAACAC+AGG | + | chr4.4:27689728-27689747 | MS.gene059525:intron | 45.0% |
!! | AGACATGAACTCTGAGGTTG+AGG | + | chr4.4:27689421-27689440 | MS.gene059525:CDS | 45.0% |
AGAAACCTTGGCACGTGTCA+TGG | + | chr4.4:27689819-27689838 | MS.gene059525:CDS | 50.0% | |
TTCGGGAGACATGAACTCTG+AGG | + | chr4.4:27689415-27689434 | MS.gene059525:CDS | 50.0% | |
! | TCAGGGTACTTCAGCAGTTG+AGG | + | chr4.4:27689226-27689245 | MS.gene059525:CDS | 50.0% |
!! | TTGCAGGGGTATTCAGAGCA+AGG | + | chr4.4:27688917-27688936 | MS.gene059525:intron | 50.0% |
GGCACGTGTCATGGAGAGAA+AGG | + | chr4.4:27689828-27689847 | MS.gene059525:CDS | 55.0% | |
TACCTTCGGTAGGGTAGCTC+AGG | - | chr4.4:27688707-27688726 | None:intergenic | 55.0% | |
TCAGGCCTTGAGGAGAGAAG+AGG | - | chr4.4:27688062-27688081 | None:intergenic | 55.0% | |
TCTCTCCATGACACGTGCCA+AGG | - | chr4.4:27689827-27689846 | None:intergenic | 55.0% | |
TGAGAGAAGGCCGAGAGAAG+AGG | - | chr4.4:27688743-27688762 | None:intergenic | 55.0% | |
TTCCTGAGCTACCCTACCGA+AGG | + | chr4.4:27688702-27688721 | MS.gene059525:CDS | 55.0% | |
!! | CAGGGGTATTCAGAGCAAGG+AGG | + | chr4.4:27688920-27688939 | MS.gene059525:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 27687782 | 27690040 | 27687782 | ID=MS.gene059525 |
chr4.4 | mRNA | 27687782 | 27690040 | 27687782 | ID=MS.gene059525.t1;Parent=MS.gene059525 |
chr4.4 | exon | 27687782 | 27687966 | 27687782 | ID=MS.gene059525.t1.exon1;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27687782 | 27687966 | 27687782 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27688524 | 27688577 | 27688524 | ID=MS.gene059525.t1.exon2;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27688524 | 27688577 | 27688524 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27688691 | 27688723 | 27688691 | ID=MS.gene059525.t1.exon3;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27688691 | 27688723 | 27688691 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27688923 | 27688941 | 27688923 | ID=MS.gene059525.t1.exon4;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27688923 | 27688941 | 27688923 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27689219 | 27689280 | 27689219 | ID=MS.gene059525.t1.exon5;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27689219 | 27689280 | 27689219 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27689415 | 27689442 | 27689415 | ID=MS.gene059525.t1.exon6;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27689415 | 27689442 | 27689415 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27689579 | 27689640 | 27689579 | ID=MS.gene059525.t1.exon7;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27689579 | 27689640 | 27689579 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27689750 | 27689849 | 27689750 | ID=MS.gene059525.t1.exon8;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27689750 | 27689849 | 27689750 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
chr4.4 | exon | 27689978 | 27690040 | 27689978 | ID=MS.gene059525.t1.exon9;Parent=MS.gene059525.t1 |
chr4.4 | CDS | 27689978 | 27690040 | 27689978 | ID=cds.MS.gene059525.t1;Parent=MS.gene059525.t1 |
Gene Sequence |
Protein sequence |