AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05965

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05965.t1 MTR_8g102240 98.152 487 7 1 1 487 1 485 0.0 991
MS.gene05965.t1 MTR_8g102240 97.947 487 7 1 1 487 1 484 0.0 988
MS.gene05965.t1 MTR_4g088245 70.335 209 49 5 30 234 47 246 2.56e-97 296
MS.gene05965.t1 MTR_4g078875 64.378 233 68 5 30 257 26 248 4.19e-95 289
MS.gene05965.t1 MTR_2g014680 57.937 252 86 6 3 244 8 249 3.12e-90 278
MS.gene05965.t1 MTR_2g090735 73.737 198 40 4 30 222 27 217 8.74e-89 273
MS.gene05965.t1 MTR_8g069160 71.739 184 41 4 30 209 47 223 4.94e-87 268
MS.gene05965.t1 MTR_1g093680 58.639 191 69 4 27 215 36 218 1.40e-74 243
MS.gene05965.t1 MTR_5g053430 59.162 191 68 3 27 215 36 218 3.73e-73 238
MS.gene05965.t1 MTR_5g053430 59.162 191 68 3 27 215 36 218 4.84e-73 238
MS.gene05965.t1 MTR_7g033320 53.646 192 80 4 25 213 30 215 5.23e-62 210
MS.gene05965.t1 MTR_1g093670 47.291 203 85 4 43 245 19 199 3.23e-52 180
MS.gene05965.t1 MTR_6g084430 28.899 218 119 9 47 255 5 195 1.20e-13 72.4
MS.gene05965.t1 MTR_8g059170 32.895 152 76 5 45 194 12 139 3.13e-13 71.2
MS.gene05965.t1 MTR_1g008740 30.994 171 90 6 47 211 13 161 3.31e-13 71.2
MS.gene05965.t1 MTR_1g008740 30.994 171 90 6 47 211 27 175 3.78e-13 71.2
MS.gene05965.t1 MTR_2g079990 30.994 171 91 6 45 212 14 160 1.13e-12 69.7
MS.gene05965.t1 MTR_3g070030 30.682 176 89 8 45 211 17 168 1.32e-12 69.3
MS.gene05965.t1 MTR_3g088110 34.416 154 72 8 45 195 5 132 1.98e-12 68.2
MS.gene05965.t1 MTR_7g085260 30.851 188 94 8 38 213 8 171 2.30e-12 68.9
MS.gene05965.t1 MTR_2g079990 32.895 152 76 5 45 194 14 141 2.34e-12 68.6
MS.gene05965.t1 MTR_2g080010 32.258 155 79 7 47 198 15 146 5.18e-12 67.8
MS.gene05965.t1 MTR_4g089135 34.437 151 73 8 47 194 15 142 6.31e-12 67.4
MS.gene05965.t1 MTR_3g109340 31.746 189 94 9 47 225 22 185 1.01e-11 66.6
MS.gene05965.t1 MTR_4g078895 68.182 44 13 1 46 89 36 78 1.08e-11 60.8
MS.gene05965.t1 MTR_2g064090 28.326 233 119 10 45 264 4 201 1.48e-11 66.2
MS.gene05965.t1 MTR_4g108760 30.286 175 90 7 45 211 15 165 1.69e-11 66.2
MS.gene05965.t1 MTR_7g100990 31.788 151 77 6 47 194 11 138 2.07e-11 65.5
MS.gene05965.t1 MTR_3g435150 31.638 177 89 7 43 211 12 164 3.11e-11 64.7
MS.gene05965.t1 MTR_5g076850 29.341 167 86 6 45 205 4 144 3.78e-11 65.9
MS.gene05965.t1 MTR_2157s0010 31.818 154 78 6 47 196 8 138 4.05e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05965.t1 AT4G29230 60.158 507 164 16 3 485 4 496 1.23e-180 515
MS.gene05965.t1 AT4G29230 60.039 508 164 17 3 485 4 497 8.86e-179 511
MS.gene05965.t1 AT4G29230 60.648 432 142 12 3 420 4 421 3.84e-153 443
MS.gene05965.t1 AT5G56620 49.170 482 145 15 10 474 4 402 1.99e-135 397
MS.gene05965.t1 AT5G56620 49.170 482 145 15 10 474 4 402 2.22e-135 397
MS.gene05965.t1 AT5G56620 51.834 409 117 11 10 399 4 351 3.62e-122 362
MS.gene05965.t1 AT4G28500 66.514 218 63 3 9 222 17 228 4.95e-97 295
MS.gene05965.t1 AT1G28470 67.513 197 50 3 30 219 53 242 3.22e-89 275
MS.gene05965.t1 AT1G25580 58.247 194 65 5 27 218 36 215 1.26e-68 226
MS.gene05965.t1 AT5G14490 53.299 197 81 7 25 218 30 218 3.13e-58 196
MS.gene05965.t1 AT5G14490 53.299 197 81 7 25 218 33 221 3.46e-58 196
MS.gene05965.t1 AT5G14490 53.299 197 81 7 25 218 30 218 3.68e-58 194
MS.gene05965.t1 AT5G14490 53.299 197 81 7 25 218 33 221 6.04e-58 196
MS.gene05965.t1 AT3G01600 50.510 196 87 5 23 215 28 216 5.40e-55 188
MS.gene05965.t1 AT1G01720 35.065 154 71 8 45 195 5 132 6.47e-14 72.8
MS.gene05965.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.25e-12 70.5
MS.gene05965.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.25e-12 70.5
MS.gene05965.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.25e-12 70.5
MS.gene05965.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.25e-12 70.5
MS.gene05965.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.25e-12 70.5
MS.gene05965.t1 AT3G15500 31.579 152 78 5 45 194 12 139 3.59e-12 67.8
MS.gene05965.t1 AT1G02220 30.872 149 76 5 48 193 4 128 4.09e-12 68.2
MS.gene05965.t1 AT1G33060 28.814 177 92 7 46 213 23 174 5.73e-12 68.6
MS.gene05965.t1 AT1G33060 28.814 177 92 7 46 213 23 174 6.12e-12 68.6
MS.gene05965.t1 AT1G52890 30.921 152 79 5 45 194 12 139 1.25e-11 66.2
MS.gene05965.t1 AT3G29035 30.682 176 88 7 45 211 22 172 2.41e-11 65.5
MS.gene05965.t1 AT4G27410 27.919 197 95 7 45 218 12 184 2.49e-11 65.1
MS.gene05965.t1 AT5G39610 30.222 225 116 10 45 259 18 211 3.23e-11 64.7
MS.gene05965.t1 AT5G53950 28.079 203 114 7 47 240 17 196 5.54e-11 64.7

Find 102 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCGAAATGATCAGATTTA+AGG 0.202690 4.2:+2883174 None:intergenic
CTTCCATTGATATTATAATT+AGG 0.223614 4.2:+2883326 None:intergenic
GCATTTGTGAAGCTTGTTAA+AGG 0.254170 4.2:+2883212 None:intergenic
AGCTTCTTGTTGGTTTCTAA+TGG 0.256606 4.2:+2880155 None:intergenic
ACCAGACCTGTTATGGTTAA+TGG 0.262903 4.2:-2883593 MS.gene05965:CDS
CCTGTTGTATATGCCTTTGA+TGG 0.263920 4.2:+2883704 None:intergenic
TGGTTTAGAGGAAGTCATTA+TGG 0.275420 4.2:-2880906 MS.gene05965:CDS
GGTTGAAATACTCTTCTTAC+TGG 0.281746 4.2:-2880128 MS.gene05965:CDS
TGTTTACCATTAACCATAAC+AGG 0.301271 4.2:+2883587 None:intergenic
CACCTTAAATCTGATCATTT+CGG 0.305151 4.2:-2883176 MS.gene05965:CDS
GATTGGAAGGCCTACTTATA+TGG 0.307907 4.2:+2882202 None:intergenic
CATCACCCAATTTGTCTTCT+CGG 0.314134 4.2:+2883508 None:intergenic
CACAGCCAAGACAGTGTAAT+TGG 0.340413 4.2:-2883412 MS.gene05965:CDS
ATGGTTAATGGTAAACAAAA+AGG 0.341742 4.2:-2883581 MS.gene05965:CDS
TATATGCCTTTGATGGTCTA+TGG 0.358040 4.2:+2883711 None:intergenic
GAAAACCCGAGAAGACAAAT+TGG 0.361472 4.2:-2883514 MS.gene05965:CDS
TCAACCACTCAGCTTCTTGT+TGG 0.371776 4.2:+2880145 None:intergenic
GGTTTAGAGGAAGTCATTAT+GGG 0.375357 4.2:-2880905 MS.gene05965:CDS
CATGTTCTTTGACTCAACTT+TGG 0.392039 4.2:+2884130 None:intergenic
TCCACAGCGAGGGCAGTGTT+TGG 0.404918 4.2:+2884489 None:intergenic
TCAATCAATTCTTGATCTGT+TGG 0.405063 4.2:+2884164 None:intergenic
TGGTAAGACCAGACCTGTTA+TGG 0.407089 4.2:-2883600 MS.gene05965:CDS
GGGAGGTGGAGAGATGATAG+TGG 0.407529 4.2:+2882173 None:intergenic
GTGAAGCTTGTTAAAGGACT+AGG 0.412943 4.2:+2883218 None:intergenic
ATCACCCAATTTGTCTTCTC+GGG 0.413577 4.2:+2883509 None:intergenic
CTTCTTCATGTTGTCCAAGA+TGG 0.416813 4.2:+2883477 None:intergenic
TGGAGAGATGATAGTGGAGA+TGG 0.419657 4.2:+2882179 None:intergenic
GGAAGAAGAGATAGTGGAAG+TGG 0.419947 4.2:-2883308 MS.gene05965:CDS
AATCTGAGTAACAATTTCCT+TGG 0.423878 4.2:+2883274 None:intergenic
GAATTCATTCTCACTATTGA+AGG 0.424881 4.2:-2884083 MS.gene05965:CDS
GATGTGTGATGGAGGGGAGG+TGG 0.425831 4.2:+2882159 None:intergenic
ATCAATGGAAGAAGAGATAG+TGG 0.430228 4.2:-2883314 MS.gene05965:CDS
TCCTTGTAAGTCACACTCTT+CGG 0.430646 4.2:+2883655 None:intergenic
GAAACAAGATGGCACAAAAC+TGG 0.433929 4.2:-2883620 MS.gene05965:CDS
AACAAGCTTCACAAATGCCT+TGG 0.435738 4.2:-2883207 MS.gene05965:CDS
GATGATAGTGGAGATGGGAT+TGG 0.442110 4.2:+2882185 None:intergenic
ATCAGGAGGCTCATGTGATC+AGG 0.445075 4.2:-2882355 MS.gene05965:CDS
ATTAGTGCAACAACAACAAC+TGG 0.448672 4.2:-2883368 MS.gene05965:CDS
CCATCAAAGGCATATACAAC+AGG 0.455100 4.2:-2883704 MS.gene05965:CDS
ACCATTAACCATAACAGGTC+TGG 0.456313 4.2:+2883592 None:intergenic
CTATCATTATAGGTTGGAAT+AGG 0.457175 4.2:-2882408 MS.gene05965:intron
GAACCTAATTATAATATCAA+TGG 0.462340 4.2:-2883329 MS.gene05965:CDS
GGATCAAATTTCACTCCTGC+TGG 0.469166 4.2:+2884185 None:intergenic
TCAGACCAATTACACTGTCT+TGG 0.476749 4.2:+2883407 None:intergenic
GATGAAATGTCTGCTGTTGT+TGG 0.479390 4.2:-2883245 MS.gene05965:CDS
CTCACTATTGAAGGAGAAGA+TGG 0.486078 4.2:-2884074 MS.gene05965:CDS
AAGGTCTGCGTCTGGTTTAG+AGG 0.487143 4.2:-2880918 MS.gene05965:CDS
CTGCGTTTGCACTAATCTGC+TGG 0.490246 4.2:+2882229 None:intergenic
ACAAGAGAAATGCAAGCATC+AGG 0.490268 4.2:-2882372 MS.gene05965:CDS
CTTGTTCTCTACACCAACTT+CGG 0.499621 4.2:-2883545 MS.gene05965:CDS
GGAGAGATGATAGTGGAGAT+GGG 0.502154 4.2:+2882180 None:intergenic
AGTGTTTGGATCCACACAAC+TGG 0.507034 4.2:+2884503 None:intergenic
CATTCTAATCATGATGATGA+TGG 0.514227 4.2:+2880082 None:intergenic
TGAAGCTTGTTAAAGGACTA+GGG 0.515511 4.2:+2883219 None:intergenic
GGTGGTGGAAGGTCTGCGTC+TGG 0.526615 4.2:-2880926 MS.gene05965:CDS
TGTGACTTACAAGGAAGTAC+AGG 0.531187 4.2:-2883647 MS.gene05965:CDS
AGAATGAATTCATCAATCAA+AGG 0.532417 4.2:+2884095 None:intergenic
AAAACCCGAGAAGACAAATT+GGG 0.533154 4.2:-2883513 MS.gene05965:CDS
CATGGTAAGAATTGTCATCA+AGG 0.534349 4.2:+2882127 None:intergenic
GTGATGCATCAATACCATCT+TGG 0.536833 4.2:-2883491 MS.gene05965:CDS
TTTAAGGTGTTGAATATCCA+AGG 0.540367 4.2:+2883190 None:intergenic
CAGCAACAACATCATAAACT+AGG 0.542717 4.2:-2880947 MS.gene05965:CDS
TGATGGTAGATGTGTGATGG+AGG 0.542872 4.2:+2882151 None:intergenic
AAGTGGAAGTTCTTCTTCCA+AGG 0.544042 4.2:-2883291 MS.gene05965:CDS
ACAACAACTGGTGAAGGAAG+TGG 0.551888 4.2:-2883356 MS.gene05965:CDS
GTAGATGTGTGATGGAGGGG+AGG 0.553746 4.2:+2882156 None:intergenic
CAACATGAAGAAGAGAAAGA+AGG 0.555164 4.2:-2883467 MS.gene05965:CDS
AGAATTGTCATCAAGGATGA+TGG 0.555788 4.2:+2882134 None:intergenic
GAATGAATTCATCAATCAAA+GGG 0.558039 4.2:+2884096 None:intergenic
ACGCAGCTTTCCATATAAGT+AGG 0.560422 4.2:-2882212 MS.gene05965:CDS
TGTGGACACAAATTTGATCA+AGG 0.561466 4.2:-2884472 MS.gene05965:CDS
TTATAGGTTGGAATAGGAGA+AGG 0.569160 4.2:-2882402 MS.gene05965:intron
CAACATCATAAACTAGGTGG+TGG 0.571157 4.2:-2880941 MS.gene05965:CDS
ACCGAAGAGTGTGACTTACA+AGG 0.573730 4.2:-2883656 MS.gene05965:CDS
TGATCTCATAGATTCTAAGC+TGG 0.574339 4.2:-2884533 MS.gene05965:CDS
CAAATTTGTGTCCACAGCGA+GGG 0.577429 4.2:+2884479 None:intergenic
GATGGTAGATGTGTGATGGA+GGG 0.582790 4.2:+2882152 None:intergenic
ATGGTAGATGTGTGATGGAG+GGG 0.584375 4.2:+2882153 None:intergenic
CAAATTTGATCAAGGCAAGC+CGG 0.585518 4.2:-2884464 MS.gene05965:intron
ATCATAAACTAGGTGGTGGA+AGG 0.591383 4.2:-2880937 MS.gene05965:CDS
TCCAAACACTGCCCTCGCTG+TGG 0.598125 4.2:-2884490 MS.gene05965:CDS
CTGGAAGAGCACCAGTTGTG+TGG 0.599801 4.2:-2884514 MS.gene05965:CDS
ATACAACAGGAACACGAAAG+AGG 0.605890 4.2:-2883691 MS.gene05965:CDS
GGATGATGGTAGATGTGTGA+TGG 0.610477 4.2:+2882148 None:intergenic
GCAACAACAACAACTGGTGA+AGG 0.614557 4.2:-2883362 MS.gene05965:CDS
TGGAACTAACAGGATTGGCT+AGG 0.614683 4.2:-2884212 MS.gene05965:intron
ATAGTGGAGATGGGATTGGA+AGG 0.617201 4.2:+2882189 None:intergenic
TTGTTGTCATGAGGGTCGAC+TGG 0.619843 4.2:+2880105 None:intergenic
TCAAATTTGTGTCCACAGCG+AGG 0.631442 4.2:+2884478 None:intergenic
GATTGGCTAGGTCTACCAGC+AGG 0.635385 4.2:-2884200 MS.gene05965:CDS
TGATGATGGTTGTTGTCATG+AGG 0.638720 4.2:+2880096 None:intergenic
AGGAGGCTCATGTGATCAGG+AGG 0.640907 4.2:-2882352 MS.gene05965:CDS
GATGATGGTTGTTGTCATGA+GGG 0.647114 4.2:+2880097 None:intergenic
AGAGAAATGCAAGCATCAGG+AGG 0.653970 4.2:-2882369 MS.gene05965:CDS
GTACAGGAGGAGAAACAAGA+TGG 0.661050 4.2:-2883631 MS.gene05965:CDS
ACAACTGGTGAAGGAAGTGG+TGG 0.665064 4.2:-2883353 MS.gene05965:CDS
GACTTACAAGGAAGTACAGG+AGG 0.666650 4.2:-2883644 MS.gene05965:CDS
GTTTAGAGGAAGTCATTATG+GGG 0.668096 4.2:-2880904 MS.gene05965:CDS
AACGTCGTCTGATATCAAAG+AGG 0.681906 4.2:-2880873 MS.gene05965:intron
GAAACCAACAAGAAGCTGAG+TGG 0.685593 4.2:-2880149 MS.gene05965:CDS
GGAGCATGATTGTTGAAACA+TGG 0.690838 4.2:+2882109 None:intergenic
CAACAACATCATAAACTAGG+TGG 0.704443 4.2:-2880944 MS.gene05965:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAGCAATTAAA+GGG + chr4.2:2880408-2880427 None:intergenic 10.0%
!! AATTAATTAATTAATTAACC+TGG + chr4.2:2880634-2880653 None:intergenic 10.0%
!! TAAAAATAAAAAGCAATTAA+AGG + chr4.2:2880409-2880428 None:intergenic 10.0%
!!! AAAAAAATTATCTCTAATTT+TGG + chr4.2:2881778-2881797 None:intergenic 10.0%
!!! ATTTTTAATTTGAATTTCAA+TGG - chr4.2:2880422-2880441 MS.gene05965:intron 10.0%
!! AAAAAAAAATTGTGTTTGTT+CGG - chr4.2:2883326-2883345 MS.gene05965:CDS 15.0%
!! ACTAGTACATTAAATAAAAT+CGG + chr4.2:2883102-2883121 None:intergenic 15.0%
!! AGTCTTTAGTTATAAAAAAT+AGG + chr4.2:2883931-2883950 None:intergenic 15.0%
!! ATAATTTGAAAAAATGAAAG+TGG + chr4.2:2881639-2881658 None:intergenic 15.0%
!! ATATTTGATACTATCATTAT+AGG - chr4.2:2882236-2882255 MS.gene05965:CDS 15.0%
!! ATTAATTTAAATTCTCAGTT+AGG - chr4.2:2880707-2880726 MS.gene05965:intron 15.0%
!! TTATATGAAATTTCAACATT+CGG - chr4.2:2881936-2881955 MS.gene05965:intron 15.0%
!!! AATAATTTTCAATTTTGTCT+TGG - chr4.2:2882821-2882840 MS.gene05965:intron 15.0%
!!! TAAATTCATTGATTTATACT+AGG - chr4.2:2883522-2883541 MS.gene05965:CDS 15.0%
!! AACTTTAATAATTTGACTCA+CGG + chr4.2:2882924-2882943 None:intergenic 20.0%
!! AATAAAGATGAAGATGAAAA+TGG + chr4.2:2883959-2883978 None:intergenic 20.0%
!! ACCTATTTATTTATTTATCG+TGG - chr4.2:2883022-2883041 MS.gene05965:intron 20.0%
!! CATGAAAAGAAGATTAATTA+GGG + chr4.2:2884447-2884466 None:intergenic 20.0%
!! CTAGTACATTAAATAAAATC+GGG + chr4.2:2883101-2883120 None:intergenic 20.0%
!! CTTCCATTGATATTATAATT+AGG + chr4.2:2881331-2881350 None:intergenic 20.0%
!! GAAAAAAAAGAAGATGAATA+TGG + chr4.2:2884049-2884068 None:intergenic 20.0%
!! GAACCTAATTATAATATCAA+TGG - chr4.2:2881325-2881344 MS.gene05965:intron 20.0%
!! TAGTTCTCTTAAGTTAATAA+AGG + chr4.2:2883210-2883229 None:intergenic 20.0%
!! TCATGAAAAGAAGATTAATT+AGG + chr4.2:2884448-2884467 None:intergenic 20.0%
!!! CAAACACAATTTTTTTTTAC+TGG + chr4.2:2883324-2883343 None:intergenic 20.0%
!!! TAGATTTTTAAAAGAGAATG+AGG - chr4.2:2882995-2883014 MS.gene05965:intron 20.0%
!!! TTGTGAATTTTAACAAATCA+TGG + chr4.2:2883291-2883310 None:intergenic 20.0%
! AAAGAACATGCATGAAATTA+AGG - chr4.2:2881991-2882010 MS.gene05965:intron 25.0%
! AAGAACATGCATGAAATTAA+GGG - chr4.2:2881992-2882011 MS.gene05965:intron 25.0%
! AATATAGCATAGCATTTGAT+TGG - chr4.2:2881832-2881851 MS.gene05965:intron 25.0%
! ACATGAAATGAGTTTAATGA+AGG + chr4.2:2881723-2881742 None:intergenic 25.0%
! ACTATGGTGACATAATTTAA+TGG - chr4.2:2880257-2880276 MS.gene05965:intron 25.0%
! AGAATGAATTCATCAATCAA+AGG + chr4.2:2880562-2880581 None:intergenic 25.0%
! ATGGTTAATGGTAAACAAAA+AGG - chr4.2:2881073-2881092 MS.gene05965:intron 25.0%
! ATGTATAATATGTATCCACA+TGG - chr4.2:2883672-2883691 MS.gene05965:CDS 25.0%
! GAATGAATTCATCAATCAAA+GGG + chr4.2:2880561-2880580 None:intergenic 25.0%
! GCCACGATAAATAAATAAAT+AGG + chr4.2:2883026-2883045 None:intergenic 25.0%
! TAAAAGTTCTATCACGATTT+AGG + chr4.2:2883184-2883203 None:intergenic 25.0%
! TCAAACACTTACAAATACTT+TGG + chr4.2:2881690-2881709 None:intergenic 25.0%
! TCAATATGTTGAACCAAAAT+GGG - chr4.2:2883470-2883489 MS.gene05965:CDS 25.0%
! TTGAATGTAACTATGTATGT+CGG + chr4.2:2881616-2881635 None:intergenic 25.0%
! TTGATACTATCATTATAGGT+TGG - chr4.2:2882240-2882259 MS.gene05965:CDS 25.0%
!! AACATTTTCTTTTCTTAGCT+AGG + chr4.2:2882151-2882170 None:intergenic 25.0%
!! CCAACAAAATGAAAATTTTC+AGG - chr4.2:2882566-2882585 MS.gene05965:intron 25.0%
!! CCTGAAAATTTTCATTTTGT+TGG + chr4.2:2882569-2882588 None:intergenic 25.0%
!! GTCCATACAAATTAATTTTG+CGG + chr4.2:2882073-2882092 None:intergenic 25.0%
!! TATAATCCCTTTTCTCATTT+TGG - chr4.2:2880284-2880303 MS.gene05965:intron 25.0%
!!! ATTTTTTACAAACAAGACCA+AGG + chr4.2:2884288-2884307 None:intergenic 25.0%
!!! TAGGAAAGGTTTTATATATG+TGG - chr4.2:2883541-2883560 MS.gene05965:CDS 25.0%
!!! TCATTGATTTATACTAGGAA+AGG - chr4.2:2883527-2883546 MS.gene05965:CDS 25.0%
!!! TTAACTTGGTGCAAATTAAT+GGG - chr4.2:2883443-2883462 MS.gene05965:CDS 25.0%
!!! TTATGTCACCATAGTTTTAA+AGG + chr4.2:2880252-2880271 None:intergenic 25.0%
!!! TTTTTTTTACTGGAAAGAAC+AGG + chr4.2:2883314-2883333 None:intergenic 25.0%
AAGAAATAAACTTGAGCAAG+AGG - chr4.2:2880816-2880835 MS.gene05965:intron 30.0%
AATCTGAGTAACAATTTCCT+TGG + chr4.2:2881383-2881402 None:intergenic 30.0%
AGAAATAAACTTGAGCAAGA+GGG - chr4.2:2880817-2880836 MS.gene05965:intron 30.0%
ATAGCTACCAAAATGAGAAA+AGG + chr4.2:2880294-2880313 None:intergenic 30.0%
ATGAAATTTCAACATTCGGT+TGG - chr4.2:2881940-2881959 MS.gene05965:intron 30.0%
ATGCATGAAATTAAGGGTTA+AGG - chr4.2:2881998-2882017 MS.gene05965:intron 30.0%
ATTTCGAAAAAGCTATGATG+AGG - chr4.2:2881510-2881529 MS.gene05965:intron 30.0%
CAAAGTTAGGTGACTTAATT+AGG + chr4.2:2880868-2880887 None:intergenic 30.0%
CAATATGTTGAACCAAAATG+GGG - chr4.2:2883471-2883490 MS.gene05965:CDS 30.0%
CACCTTAAATCTGATCATTT+CGG - chr4.2:2881478-2881497 MS.gene05965:intron 30.0%
CTCAATATGTTGAACCAAAA+TGG - chr4.2:2883469-2883488 MS.gene05965:CDS 30.0%
GAATTCATTCTCACTATTGA+AGG - chr4.2:2880571-2880590 MS.gene05965:intron 30.0%
GATATTCATTTCAAACTCTG+AGG + chr4.2:2884393-2884412 None:intergenic 30.0%
TAAAGGGAGAGAAATCAATA+AGG + chr4.2:2880392-2880411 None:intergenic 30.0%
TAGCTACCAAAATGAGAAAA+GGG + chr4.2:2880293-2880312 None:intergenic 30.0%
TCAATCAATTCTTGATCTGT+TGG + chr4.2:2880493-2880512 None:intergenic 30.0%
TCATAAAATAATGCCCACTA+GGG - chr4.2:2883856-2883875 MS.gene05965:intron 30.0%
TCATTGCCAAAATCAAAGTT+AGG + chr4.2:2880881-2880900 None:intergenic 30.0%
TGAATTTCAATGGAACTAAC+AGG - chr4.2:2880432-2880451 MS.gene05965:intron 30.0%
TGTTTACCATTAACCATAAC+AGG + chr4.2:2881070-2881089 None:intergenic 30.0%
TTTACTCAACCAAATACATG+TGG - chr4.2:2883400-2883419 MS.gene05965:CDS 30.0%
! AATTAACCTGGAAGTTTTTC+TGG + chr4.2:2880622-2880641 None:intergenic 30.0%
! ACTCATCGTTAAACTTTTTG+AGG - chr4.2:2882790-2882809 MS.gene05965:intron 30.0%
! ATTTTCTTTTCTTAGCTAGG+TGG + chr4.2:2882148-2882167 None:intergenic 30.0%
! CTATCATTATAGGTTGGAAT+AGG - chr4.2:2882246-2882265 MS.gene05965:CDS 30.0%
! TTAGCTATTTCACACAAGAA+AGG - chr4.2:2884205-2884224 MS.gene05965:intron 30.0%
! TTTTCTTTTCTTAGCTAGGT+GGG + chr4.2:2882147-2882166 None:intergenic 30.0%
!! AAGTCACCTAACTTTGATTT+TGG - chr4.2:2880872-2880891 MS.gene05965:intron 30.0%
!! ACAGTTTCATGCTTGTTATT+TGG + chr4.2:2883570-2883589 None:intergenic 30.0%
!! CACCGCAAAATTAATTTGTA+TGG - chr4.2:2882068-2882087 MS.gene05965:intron 30.0%
!! CTTAACTTGGTGCAAATTAA+TGG - chr4.2:2883442-2883461 MS.gene05965:CDS 30.0%
!! GATTTTGGCAATGAATTTTC+AGG - chr4.2:2880887-2880906 MS.gene05965:CDS 30.0%
!! TCATGTATTTTTGCATTCCT+TGG - chr4.2:2884268-2884287 MS.gene05965:intron 30.0%
!! TTTAAGGTGTTGAATATCCA+AGG + chr4.2:2881467-2881486 None:intergenic 30.0%
!!! CATCATAGCTTTTTCGAAAT+GGG + chr4.2:2881510-2881529 None:intergenic 30.0%
!!! TCATCATAGCTTTTTCGAAA+TGG + chr4.2:2881511-2881530 None:intergenic 30.0%
!!! TTTTGGTTCAACATATTGAG+TGG + chr4.2:2883469-2883488 None:intergenic 30.0%
AAAACCCGAGAAGACAAATT+GGG - chr4.2:2881141-2881160 MS.gene05965:intron 35.0%
ACAATGCAATGGAAATTGAC+TGG + chr4.2:2884353-2884372 None:intergenic 35.0%
AGAAAAGAGGTCTCTTAACT+TGG - chr4.2:2883429-2883448 MS.gene05965:CDS 35.0%
AGAATTGTCATCAAGGATGA+TGG + chr4.2:2882523-2882542 None:intergenic 35.0%
AGCCGAAATGATCAGATTTA+AGG + chr4.2:2881483-2881502 None:intergenic 35.0%
ATCAATGGAAGAAGAGATAG+TGG - chr4.2:2881340-2881359 MS.gene05965:intron 35.0%
ATCTTCATTACACTTCTCAC+AGG - chr4.2:2884470-2884489 MS.gene05965:CDS 35.0%
ATTAGTGCAACAACAACAAC+TGG - chr4.2:2881286-2881305 MS.gene05965:intron 35.0%
CAACAACATCATAAACTAGG+TGG - chr4.2:2883710-2883729 MS.gene05965:CDS 35.0%
CAACATGAAGAAGAGAAAGA+AGG - chr4.2:2881187-2881206 MS.gene05965:intron 35.0%
CAGCAACAACATCATAAACT+AGG - chr4.2:2883707-2883726 MS.gene05965:CDS 35.0%
CATAGCATTTGATTGGAACA+TGG - chr4.2:2881839-2881858 MS.gene05965:intron 35.0%
CATGGTAAGAATTGTCATCA+AGG + chr4.2:2882530-2882549 None:intergenic 35.0%
CATGTTCTTTGACTCAACTT+TGG + chr4.2:2880527-2880546 None:intergenic 35.0%
CTCATAAAATAATGCCCACT+AGG - chr4.2:2883855-2883874 MS.gene05965:intron 35.0%
GGTTGAAATACTCTTCTTAC+TGG - chr4.2:2884526-2884545 MS.gene05965:CDS 35.0%
GGTTTAGAGGAAGTCATTAT+GGG - chr4.2:2883749-2883768 MS.gene05965:intron 35.0%
GTACACAGAAAACAATGCAA+TGG + chr4.2:2884364-2884383 None:intergenic 35.0%
GTCTCACATCAAGTATATTG+AGG + chr4.2:2883162-2883181 None:intergenic 35.0%
GTTTAGAGGAAGTCATTATG+GGG - chr4.2:2883750-2883769 MS.gene05965:intron 35.0%
TATCGTCATCGTTGATATTG+TGG - chr4.2:2883127-2883146 MS.gene05965:intron 35.0%
TCGCTAGGAAAAAACTATAG+CGG - chr4.2:2882722-2882741 MS.gene05965:intron 35.0%
TCTCACTTTCCACATGTATT+TGG + chr4.2:2883412-2883431 None:intergenic 35.0%
TGATCTCATAGATTCTAAGC+TGG - chr4.2:2880121-2880140 MS.gene05965:CDS 35.0%
TGATTGTCAATTGTCATCGA+TGG - chr4.2:2883602-2883621 MS.gene05965:CDS 35.0%
TGGTTTAGAGGAAGTCATTA+TGG - chr4.2:2883748-2883767 MS.gene05965:CDS 35.0%
TGTGGACACAAATTTGATCA+AGG - chr4.2:2880182-2880201 MS.gene05965:intron 35.0%
TTCAATGGAACTAACAGGAT+TGG - chr4.2:2880437-2880456 MS.gene05965:intron 35.0%
! ACTATGATGACGTGGAAAAA+AGG - chr4.2:2884326-2884345 MS.gene05965:intron 35.0%
! ACTCACGGTTAAACATTTTG+AGG + chr4.2:2882909-2882928 None:intergenic 35.0%
! CTTTTTCCATAGACCATCAA+AGG - chr4.2:2880937-2880956 MS.gene05965:CDS 35.0%
! TATATGCCTTTGATGGTCTA+TGG + chr4.2:2880946-2880965 None:intergenic 35.0%
! TTATAGGTTGGAATAGGAGA+AGG - chr4.2:2882252-2882271 MS.gene05965:CDS 35.0%
!! ACTGACACTGATTTATCATC+TGG + chr4.2:2882100-2882119 None:intergenic 35.0%
!! AGCTTCTTGTTGGTTTCTAA+TGG + chr4.2:2884502-2884521 None:intergenic 35.0%
!! GCATTTGTGAAGCTTGTTAA+AGG + chr4.2:2881445-2881464 None:intergenic 35.0%
!! TGAAGCTTGTTAAAGGACTA+GGG + chr4.2:2881438-2881457 None:intergenic 35.0%
AACAAGCTTCACAAATGCCT+TGG - chr4.2:2881447-2881466 MS.gene05965:intron 40.0%
AACGTCGTCTGATATCAAAG+AGG - chr4.2:2883781-2883800 MS.gene05965:intron 40.0%
AAGTGGAAGTTCTTCTTCCA+AGG - chr4.2:2881363-2881382 MS.gene05965:intron 40.0%
ACAAGAGAAATGCAAGCATC+AGG - chr4.2:2882282-2882301 MS.gene05965:CDS 40.0%
ACCAGACCTGTTATGGTTAA+TGG - chr4.2:2881061-2881080 MS.gene05965:intron 40.0%
ACCATTAACCATAACAGGTC+TGG + chr4.2:2881065-2881084 None:intergenic 40.0%
ACGCAGCTTTCCATATAAGT+AGG - chr4.2:2882442-2882461 MS.gene05965:intron 40.0%
ATACAACAGGAACACGAAAG+AGG - chr4.2:2880963-2880982 MS.gene05965:intron 40.0%
ATCACCCAATTTGTCTTCTC+GGG + chr4.2:2881148-2881167 None:intergenic 40.0%
CAAATTTGATCAAGGCAAGC+CGG - chr4.2:2880190-2880209 MS.gene05965:intron 40.0%
CAACATCATAAACTAGGTGG+TGG - chr4.2:2883713-2883732 MS.gene05965:CDS 40.0%
CACTAGGGAAAGAGAAAAGA+GGG - chr4.2:2883871-2883890 MS.gene05965:intron 40.0%
CATCACCCAATTTGTCTTCT+CGG + chr4.2:2881149-2881168 None:intergenic 40.0%
CATGTGGAAAGTGAGAAAAG+AGG - chr4.2:2883416-2883435 MS.gene05965:CDS 40.0%
CCTGTTGTATATGCCTTTGA+TGG + chr4.2:2880953-2880972 None:intergenic 40.0%
CGCTAGGAAAAAACTATAGC+GGG - chr4.2:2882723-2882742 MS.gene05965:intron 40.0%
CTCACTATTGAAGGAGAAGA+TGG - chr4.2:2880580-2880599 MS.gene05965:intron 40.0%
CTTCTTCATGTTGTCCAAGA+TGG + chr4.2:2881180-2881199 None:intergenic 40.0%
CTTGTTCTCTACACCAACTT+CGG - chr4.2:2881109-2881128 MS.gene05965:intron 40.0%
GAAAACCCGAGAAGACAAAT+TGG - chr4.2:2881140-2881159 MS.gene05965:intron 40.0%
GAAACAAGATGGCACAAAAC+TGG - chr4.2:2881034-2881053 MS.gene05965:intron 40.0%
GATGAAATGTCTGCTGTTGT+TGG - chr4.2:2881409-2881428 MS.gene05965:intron 40.0%
GATTGGAAGGCCTACTTATA+TGG + chr4.2:2882455-2882474 None:intergenic 40.0%
GGAGCATGATTGTTGAAACA+TGG + chr4.2:2882548-2882567 None:intergenic 40.0%
GTAACTATGTATGTCGGTGT+CGG + chr4.2:2881610-2881629 None:intergenic 40.0%
GTGATGCATCAATACCATCT+TGG - chr4.2:2881163-2881182 MS.gene05965:intron 40.0%
TCAGACCAATTACACTGTCT+TGG + chr4.2:2881250-2881269 None:intergenic 40.0%
TCCTTGTAAGTCACACTCTT+CGG + chr4.2:2881002-2881021 None:intergenic 40.0%
! AAAATGGGGTTGATTGTGCA+TGG - chr4.2:2883485-2883504 MS.gene05965:CDS 40.0%
! AACCTGGAAGTTTTTCTGGA+TGG + chr4.2:2880618-2880637 None:intergenic 40.0%
! ACCTGGAAGTTTTTCTGGAT+GGG + chr4.2:2880617-2880636 None:intergenic 40.0%
! ATGCACAATCAACCCCATTT+TGG + chr4.2:2883486-2883505 None:intergenic 40.0%
! CCATCAAAGGCATATACAAC+AGG - chr4.2:2880950-2880969 MS.gene05965:CDS 40.0%
! CTCTTTTCTCTTTCCCTAGT+GGG + chr4.2:2883872-2883891 None:intergenic 40.0%
! GATGATGGTTGTTGTCATGA+GGG + chr4.2:2884560-2884579 None:intergenic 40.0%
! TGTGACTTACAAGGAAGTAC+AGG - chr4.2:2881007-2881026 MS.gene05965:intron 40.0%
! TTTTCGATTCTTGCCGAAGT+TGG + chr4.2:2881125-2881144 None:intergenic 40.0%
!! AGCTTTTGACTATGATGACG+TGG - chr4.2:2884318-2884337 MS.gene05965:intron 40.0%
!! ATCATAAACTAGGTGGTGGA+AGG - chr4.2:2883717-2883736 MS.gene05965:CDS 40.0%
!! CACTGATTTATCATCTGGTC+AGG + chr4.2:2882095-2882114 None:intergenic 40.0%
!! GCTGCGAACCTTTAAAACTA+TGG - chr4.2:2880241-2880260 MS.gene05965:intron 40.0%
!! GTGAAGCTTGTTAAAGGACT+AGG + chr4.2:2881439-2881458 None:intergenic 40.0%
!! TGATGATGGTTGTTGTCATG+AGG + chr4.2:2884561-2884580 None:intergenic 40.0%
!! TTTTCAGGAGTGACAAGAGA+TGG - chr4.2:2880902-2880921 MS.gene05965:CDS 40.0%
ACAACAACTGGTGAAGGAAG+TGG - chr4.2:2881298-2881317 MS.gene05965:intron 45.0%
ACCCATCCAGAAAAACTTCC+AGG - chr4.2:2880613-2880632 MS.gene05965:intron 45.0%
ACCGCGACTATTATACGTAC+CGG + chr4.2:2880212-2880231 None:intergenic 45.0%
AGAGAAATGCAAGCATCAGG+AGG - chr4.2:2882285-2882304 MS.gene05965:CDS 45.0%
AGTAGCTAGCTAACCAACGT+TGG - chr4.2:2882117-2882136 MS.gene05965:CDS 45.0%
AGTGTTTGGATCCACACAAC+TGG + chr4.2:2880154-2880173 None:intergenic 45.0%
CAAATTTGTGTCCACAGCGA+GGG + chr4.2:2880178-2880197 None:intergenic 45.0%
CACAGCCAAGACAGTGTAAT+TGG - chr4.2:2881242-2881261 MS.gene05965:intron 45.0%
CCACTAGGGAAAGAGAAAAG+AGG - chr4.2:2883870-2883889 MS.gene05965:intron 45.0%
GAAACCAACAAGAAGCTGAG+TGG - chr4.2:2884505-2884524 MS.gene05965:CDS 45.0%
GCAACAACAACAACTGGTGA+AGG - chr4.2:2881292-2881311 MS.gene05965:intron 45.0%
GGATCAAATTTCACTCCTGC+TGG + chr4.2:2880472-2880491 None:intergenic 45.0%
GTACAGGAGGAGAAACAAGA+TGG - chr4.2:2881023-2881042 MS.gene05965:intron 45.0%
TCAAATTTGTGTCCACAGCG+AGG + chr4.2:2880179-2880198 None:intergenic 45.0%
TCAACCACTCAGCTTCTTGT+TGG + chr4.2:2884512-2884531 None:intergenic 45.0%
TGATGGTAGATGTGTGATGG+AGG + chr4.2:2882506-2882525 None:intergenic 45.0%
TGGTAAGACCAGACCTGTTA+TGG - chr4.2:2881054-2881073 MS.gene05965:intron 45.0%
! ACCGAAGAGTGTGACTTACA+AGG - chr4.2:2880998-2881017 MS.gene05965:intron 45.0%
! ATAGTGGAGATGGGATTGGA+AGG + chr4.2:2882468-2882487 None:intergenic 45.0%
! ATGGTAGATGTGTGATGGAG+GGG + chr4.2:2882504-2882523 None:intergenic 45.0%
! CCTCTTTTCTCTTTCCCTAG+TGG + chr4.2:2883873-2883892 None:intergenic 45.0%
! GACTTACAAGGAAGTACAGG+AGG - chr4.2:2881010-2881029 MS.gene05965:intron 45.0%
! GATGGTAGATGTGTGATGGA+GGG + chr4.2:2882505-2882524 None:intergenic 45.0%
! GGATGATGGTAGATGTGTGA+TGG + chr4.2:2882509-2882528 None:intergenic 45.0%
!! GATGATAGTGGAGATGGGAT+TGG + chr4.2:2882472-2882491 None:intergenic 45.0%
!! GGAAGAAGAGATAGTGGAAG+TGG - chr4.2:2881346-2881365 MS.gene05965:intron 45.0%
!! GGAGAGATGATAGTGGAGAT+GGG + chr4.2:2882477-2882496 None:intergenic 45.0%
!! TGGAACTAACAGGATTGGCT+AGG - chr4.2:2880442-2880461 MS.gene05965:intron 45.0%
!! TGGAGAGATGATAGTGGAGA+TGG + chr4.2:2882478-2882497 None:intergenic 45.0%
!!! AATTATTAAAGTTTTATTAA+TGG - chr4.2:2882931-2882950 MS.gene05965:intron 5.0%
!!! CTTTTTTATAAATAAAAATT+GGG - chr4.2:2883068-2883087 MS.gene05965:intron 5.0%
!!! TCTTTTTTATAAATAAAAAT+TGG - chr4.2:2883067-2883086 MS.gene05965:intron 5.0%
!!! TTTTTTATAAATAAAAATTG+GGG - chr4.2:2883069-2883088 MS.gene05965:intron 5.0%
!!! TTTTTTCTAATATTTTTTAT+TGG - chr4.2:2881792-2881811 MS.gene05965:intron 5.0%
ACAACTGCGATTGCATCGCT+AGG - chr4.2:2882707-2882726 MS.gene05965:intron 50.0%
ACAACTGGTGAAGGAAGTGG+TGG - chr4.2:2881301-2881320 MS.gene05965:intron 50.0%
ACGTATAATAGTCGCGGTCG+CGG - chr4.2:2880214-2880233 MS.gene05965:intron 50.0%
ATCAGGAGGCTCATGTGATC+AGG - chr4.2:2882299-2882318 MS.gene05965:CDS 50.0%
CTAGGTGGGTAAACCAACGT+TGG + chr4.2:2882133-2882152 None:intergenic 50.0%
CTGCGTTTGCACTAATCTGC+TGG + chr4.2:2882428-2882447 None:intergenic 50.0%
GCCGGTACGTATAATAGTCG+CGG - chr4.2:2880208-2880227 MS.gene05965:intron 50.0%
TTGTTGTCATGAGGGTCGAC+TGG + chr4.2:2884552-2884571 None:intergenic 50.0%
! AAGGTCTGCGTCTGGTTTAG+AGG - chr4.2:2883736-2883755 MS.gene05965:CDS 50.0%
!! ATGTATGTCGGTGTCGGACA+TGG + chr4.2:2881604-2881623 None:intergenic 50.0%
AGGAGGCTCATGTGATCAGG+AGG - chr4.2:2882302-2882321 MS.gene05965:CDS 55.0%
GGGAGGTGGAGAGATGATAG+TGG + chr4.2:2882484-2882503 None:intergenic 55.0%
! GATTGGCTAGGTCTACCAGC+AGG - chr4.2:2880454-2880473 MS.gene05965:intron 55.0%
! GTAGATGTGTGATGGAGGGG+AGG + chr4.2:2882501-2882520 None:intergenic 55.0%
!! CTGGAAGAGCACCAGTTGTG+TGG - chr4.2:2880140-2880159 MS.gene05965:CDS 55.0%
CTGCTGCTGTTGCTGCCATG+TGG + chr4.2:2883690-2883709 None:intergenic 60.0%
TCCAAACACTGCCCTCGCTG+TGG - chr4.2:2880164-2880183 MS.gene05965:CDS 60.0%
TCCACAGCGAGGGCAGTGTT+TGG + chr4.2:2880168-2880187 None:intergenic 60.0%
! GATGTGTGATGGAGGGGAGG+TGG + chr4.2:2882498-2882517 None:intergenic 60.0%
!! GGTGGTGGAAGGTCTGCGTC+TGG - chr4.2:2883728-2883747 MS.gene05965:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 2880086 2884590 2880086 ID=MS.gene05965
chr4.2 mRNA 2880086 2884590 2880086 ID=MS.gene05965.t1;Parent=MS.gene05965
chr4.2 exon 2884465 2884590 2884465 ID=MS.gene05965.t1.exon1;Parent=MS.gene05965.t1
chr4.2 CDS 2884465 2884590 2884465 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
chr4.2 exon 2884042 2884222 2884042 ID=MS.gene05965.t1.exon2;Parent=MS.gene05965.t1
chr4.2 CDS 2884042 2884222 2884042 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
chr4.2 exon 2883145 2883767 2883145 ID=MS.gene05965.t1.exon3;Parent=MS.gene05965.t1
chr4.2 CDS 2883145 2883767 2883145 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
chr4.2 exon 2882089 2882418 2882089 ID=MS.gene05965.t1.exon4;Parent=MS.gene05965.t1
chr4.2 CDS 2882089 2882418 2882089 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
chr4.2 exon 2880874 2880978 2880874 ID=MS.gene05965.t1.exon5;Parent=MS.gene05965.t1
chr4.2 CDS 2880874 2880978 2880874 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
chr4.2 exon 2880086 2880184 2880086 ID=MS.gene05965.t1.exon6;Parent=MS.gene05965.t1
chr4.2 CDS 2880086 2880184 2880086 ID=cds.MS.gene05965.t1;Parent=MS.gene05965.t1
Gene Sequence

>MS.gene05965

ATGATGAATAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAGCTGGAAGAGCACCAGTTGTGTGGATCCAAACACTGCCCTCGCTGTGGACACAAATTTGATCAAGGCAAGCCGGTACGTATAATAGTCGCGGTCGCGGTTACGCTGCGAACCTTTAAAACTATGGTGACATAATTTAATGGTGTTTATAATCCCTTTTCTCATTTTGGTAGCTATTACTAAAGTTAGTTTTCTTCTTTTCTTCTTTTAATTTCTTTTAATTATATTCTTTGTCTTTCTCTAATATTCTCTCCTTATTGATTTCTCTCCCTTTAATTGCTTTTTATTTTTAATTTGAATTTCAATGGAACTAACAGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAATTGATTGAACATCTTGAAGCCAAAGTTGAGTCAAAGAACATGCAGAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCAGAAAAACTTCCAGGTTAATTAATTAATTAATTCTCATTATTTCAATTACTACAAACAAATTATGAAATATATATTTAATTATAATATTAATTTAAATTCTCAGTTAGGTTTTTTTTTTTATGTATGTGTATGTCGACACTAGCTAAGAAAATAGCTTATGAGATGTTTATTTATTTATTTATTATTATATATATAAGAAATAAACTTGAGCAAGAGGGTTTAATTTGTCTTATATATAGCTCACCTAATTAAGTCACCTAACTTTGATTTTGGCAATGAATTTTCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACACGAAAGAGGAGAAAGATTCAAACCGAAGAGTGTGACTTACAAGGAAGTACAGGAGGAGAAACAAGATGGCACAAAACTGGTAAGACCAGACCTGTTATGGTTAATGGTAAACAAAAAGGTTGCAAGAAAATTCTTGTTCTCTACACCAACTTCGGCAAGAATCGAAAACCCGAGAAGACAAATTGGGTGATGCATCAATACCATCTTGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTTTCAAAGATATTTTATCAGACACAGCCAAGACAGTGTAATTGGTCTGATAATAATCAAAGAATAATTAGTGCAACAACAACAACTGGTGAAGGAAGTGGTGGAGAACCTAATTATAATATCAATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCCAAGGAAATTGTTACTCAGATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTCCCTAGTCCTTTAACAAGCTTCACAAATGCCTTGGATATTCAACACCTTAAATCTGATCATTTCGGCTTCAACCCATTTCGAAAAAGCTATGATGAGGTACGTTACATATATTATGTAGCAGACACACACTTAAGATTGAAGACATGTTTAGTGTCTGACACATGTCCATGTCCGACACCGACATACATAGTTACATTCAACCACTTTCATTTTTTCAAATTATTGCTTGCATCAATGTGCTAGTGTTGTGTCCAAAGTATTTGTAAGTGTTTGATATAAATCATCCTTCATTAAACTCATTTCATGTCAACATCATCTTATCACAATGTGTTACAAACGCCAAAATTAGAGATAATTTTTTTCTAATATTTTTTATTGGTAATTTATTTAAATTTTAATATAGCATAGCATTTGATTGGAACATGGATATATAGACACGTTAATTTCTAAAGAAATGAACGTGATGTTTCACTAGCAGCTATACATTATTAACTTTATAATTATATGAAATTTCAACATTCGGTTGGTAAGTATATGCTTTTGCACAAAAAGATGAAAGAACATGCATGAAATTAAGGGTTAAGGAATGTGTAGATCGAGTGTTGACATGATTAATAAACATTGCTTACATACACCGCAAAATTAATTTGTATGGACCTGACCAGATGATAAATCAGTGTCAGTAGCTAGCTAACCAACGTTGGTTTACCCACCTAGCTAAGAAAAGAAAATGTTACATTATATTATAAATAAATAAATAAATATTAATGAATATAGTTTTGAATCTTTGATGATGATTGATATTTGATACTATCATTATAGGTTGGAATAGGAGAAGGTTCTACAACAAGAGAAATGCAAGCATCAGGAGGCTCATGTGATCAGGAGGTGCATGAAAGACAGCATCATGTATTAGCACATCATCATCAACAACAACAACAACATCATCAGCAACAGCAACAGCAACAGCAACATGAGCATCATGTGCACCAGCAGATTAGTGCAAACGCAGCTTTCCATATAAGTAGGCCTTCCAATCCCATCTCCACTATCATCTCTCCACCTCCCCTCCATCACACATCTACCATCATCCTTGATGACAATTCTTACCATGTTTCAACAATCATGCTCCAACAAAATGAAAATTTTCAGGTATGTATTATTCATCATCTAAATCAGTCTTCTTAAATATTCTTCTTGTAGTTGTTTCTCATTAATTTTCTTTATGTAAACAATTGAGACATAATTCAAATCGCAGTAGAGCTCAGCTCACAACTGCGATTGCATCGCTAGGAAAAAACTATAGCGGGAAAAAAAATTAGTCTATAGTATTTTTATGAATCATAATAATTTAACTCATCGTTAAACTTTTTGAGGAAGAAATCAATAATTTTCAATTTTGTCTTGGTGTTTTTATTTAATAATTTTCAATTAGTCTTTATGTAAACAATTGAAAATTATTGATTTCTTCCTCAAAATGTTTAACCGTGAGTCAAATTATTAAAGTTTTATTAATGGTACTAAAATATCTCAAAAAGTGATTAATTTAAGAATTTTTTTAGATTTTTAAAAGAGAATGAGGTAACACCTATTTATTTATTTATCGTGGCAAAATAAAAGTTTAGTTGATGTCTTTTTTATAAATAAAAATTGGGGCAAATGCCCGATTTTATTTAATGTACTAGTTTCTATATCGTCATCGTTGATATTGTGGTTGTAGAATCCTCAATATACTTGATGTGAGACCTAAATCGTGATAGAACTTTTAAAACCTTTATTAACTTAAGAGAACTATTTTTACTTCATGATTTATTTTTAAATTTTTTATTAACTTAAGAGAACTATTTTTACTCCATGATTTGTTAAAATTCACAACCTGTTCTTTCCAGTAAAAAAAAATTGTGTTTGTTCGGTTTTGTTCATTTACAAGACAAAAGATCGTGTCTTTAGAATTTACTCATGAATTTACTCAACCAAATACATGTGGAAAGTGAGAAAAGAGGTCTCTTAACTTGGTGCAAATTAATGGGCCACTCAATATGTTGAACCAAAATGGGGTTGATTGTGCATGGTATTGTGCACAAGCTAAATTCATTGATTTATACTAGGAAAGGTTTTATATATGTGGTTGCCAAATAACAAGCATGAAACTGTCTAATCACTTTTTGATTGTCAATTGTCATCGATGGATCAAACACAATGATTACTTAGAATTTGATTGATATGTTGAAAATTGATGTATAATATGTATCCACATGGCAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCGTCTGGTTTAGAGGAAGTCATTATGGGGTGCACTTCAACGTCGTCTGATATCAAAGAGGTCAGAAACAAACTTTTTGACTCTGAAATATATATATGAACTTTGTTTATTTCTCATAAAATAATGCCCACTAGGGAAAGAGAAAAGAGGGTCAAGAAAGATACTATTAATAGAAATTAAAACAACCTATTTTTTATAACTAAAGACTAGAAGCCATTTTCATCTTCATCTTTATTATCTTTATATCTTTAAAATGTTTTCACATTTGAACAATCAAGTTGTATTTAAATTAAAGACTAGAAGCCATATTCATCTTCTTTTTTTTCCTCTCTTTAGATCTTTAAAATGTTTTCATAATTGTATATCTCAACACACTACTATTTAATTTCTTTGCATGATAGAAAATAATGAAATACGATGATCATATATATTTGCATTTTTGTAAAGTAGAAGCTTGTTTTATTAGCTATTTCACACAAGAAAGGAAGATTGCAAAAAGATGATACAGTACTACTAGTGACATAATCATGTATTTTTGCATTCCTTGGTCTTGTTTGTAAAAAATGCTAAATATTAGCTTTTGACTATGATGACGTGGAAAAAAGGACCAGTCAATTTCCATTGCATTGTTTTCTGTGTACAATATTCCTCAGAGTTTGAAATGAATATCTATATTTTTTTTTTTCATTTGAAAAAGCTAACCCTAATTAATCTTCTTTTCATGATGATCTTCATTACACTTCTCACAGGAGTCATCCATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTCGACCCTCATGACAACAACCATCATCATCATGATTAG
Protein sequence

>MS.gene05965.t1

MMNNKMSNVSSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNQRIISATTTTGEGSGGEPNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFNPFRKSYDEVGIGEGSTTREMQASGGSCDQEVHERQHHVLAHHHQQQQQHHQQQQQQQQHEHHVHQQISANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIMLQQNENFQQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPVDPHDNNHHHHD