AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059738

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059738.t1 MTR_2g078200 90.099 303 20 4 1 302 1 294 7.01e-154 432
MS.gene059738.t1 MTR_8g463380 41.278 407 118 14 3 300 37 431 1.27e-72 230
MS.gene059738.t1 MTR_2g090960 39.255 349 136 11 3 301 7 329 6.34e-60 194
MS.gene059738.t1 MTR_4g079580 36.310 336 138 9 3 283 5 319 2.88e-50 169
MS.gene059738.t1 MTR_7g015010 62.162 74 28 0 14 87 51 124 9.85e-25 102
MS.gene059738.t1 MTR_6g015350 63.235 68 25 0 14 81 43 110 4.11e-21 92.0
MS.gene059738.t1 MTR_4g109660 58.824 68 28 0 14 81 50 117 1.74e-20 89.7
MS.gene059738.t1 MTR_3g026050 47.423 97 47 2 14 109 51 144 4.05e-20 89.7
MS.gene059738.t1 MTR_1g103380 57.377 61 26 0 19 79 200 260 1.13e-16 80.5
MS.gene059738.t1 MTR_6g017055 58.333 60 25 0 20 79 126 185 3.78e-16 78.6
MS.gene059738.t1 MTR_7g018500 58.621 58 24 0 22 79 122 179 7.68e-16 77.4
MS.gene059738.t1 MTR_4g111935 53.731 67 30 1 14 79 125 191 5.31e-15 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059738.t1 AT1G53230 42.627 373 122 16 4 300 33 389 2.16e-66 213
MS.gene059738.t1 AT1G53230 42.627 373 122 16 4 300 33 389 2.16e-66 213
MS.gene059738.t1 AT3G15030 86.747 83 11 0 4 86 29 111 5.83e-46 160
MS.gene059738.t1 AT3G15030 45.139 144 60 4 170 300 281 418 3.76e-17 81.6
MS.gene059738.t1 AT3G15030 86.747 83 11 0 4 86 29 111 5.83e-46 160
MS.gene059738.t1 AT3G15030 45.139 144 60 4 170 300 281 418 3.76e-17 81.6
MS.gene059738.t1 AT3G15030 86.747 83 11 0 4 86 29 111 5.83e-46 160
MS.gene059738.t1 AT3G15030 45.139 144 60 4 170 300 281 418 3.76e-17 81.6
MS.gene059738.t1 AT3G15030 86.747 83 11 0 4 86 29 111 5.83e-46 160
MS.gene059738.t1 AT3G15030 45.139 144 60 4 170 300 281 418 3.76e-17 81.6
MS.gene059738.t1 AT2G31070 85.526 76 11 0 3 78 12 87 1.28e-39 142
MS.gene059738.t1 AT4G18390 50.000 100 42 2 2 101 29 120 1.26e-23 99.4
MS.gene059738.t1 AT4G18390 50.000 100 42 2 2 101 29 120 1.26e-23 99.4
MS.gene059738.t1 AT3G02150 63.768 69 25 0 14 82 68 136 3.97e-23 96.7
MS.gene059738.t1 AT3G02150 63.768 69 25 0 14 82 68 136 6.89e-23 97.4
MS.gene059738.t1 AT1G30210 58.333 84 31 1 14 97 44 123 1.71e-22 95.9
MS.gene059738.t1 AT1G30210 58.333 84 31 1 14 97 44 123 1.71e-22 95.9
MS.gene059738.t1 AT5G60970 58.824 68 28 0 14 81 57 124 9.74e-21 91.3
MS.gene059738.t1 AT5G08070 53.571 84 32 2 2 83 20 98 4.21e-20 87.8
MS.gene059738.t1 AT5G08070 53.571 84 32 2 2 83 20 98 4.21e-20 87.8
MS.gene059738.t1 AT1G68800 57.143 63 27 0 16 78 108 170 8.27e-20 89.0
MS.gene059738.t1 AT1G68800 57.143 63 27 0 16 78 108 170 8.62e-20 88.6
MS.gene059738.t1 AT1G67260 54.545 66 30 0 15 80 82 147 1.68e-17 82.0
MS.gene059738.t1 AT1G67260 54.545 66 30 0 15 80 82 147 1.68e-17 82.0
MS.gene059738.t1 AT1G67260 54.545 66 30 0 15 80 82 147 1.92e-17 82.0
MS.gene059738.t1 AT3G18550 55.738 61 27 0 19 79 147 207 1.43e-15 77.0
MS.gene059738.t1 AT3G18550 55.738 61 27 0 19 79 147 207 1.47e-15 77.0
MS.gene059738.t1 AT3G18550 55.738 61 27 0 19 79 147 207 1.52e-15 77.0
MS.gene059738.t1 AT3G18550 55.738 61 27 0 19 79 147 207 1.52e-15 77.0

Find 76 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCCAATCAAGTGCTTTAC+TGG 0.263366 2.4:+20313068 None:intergenic
TTACTAAACGACACCGTTTC+AGG 0.281541 2.4:+20312838 None:intergenic
TCGGGTGCCGGATTTGCTTC+TGG 0.295233 2.4:-20312469 MS.gene059738:CDS
TTCCGTGTGCCGGCACGAAT+TGG 0.322438 2.4:-20312433 MS.gene059738:CDS
CGACGTCAAGCGGGTGGTTC+GGG 0.323280 2.4:-20312487 MS.gene059738:CDS
GGCGGTGGTGTTTGTGGTGA+TGG 0.329544 2.4:-20312670 MS.gene059738:CDS
TTGACGGAGGTCACATTATA+AGG 0.376567 2.4:-20313221 MS.gene059738:CDS
TCGACGTCAAGCGGGTGGTT+CGG 0.377963 2.4:-20312488 MS.gene059738:CDS
GGAATGGTGACGTGGAATTC+CGG 0.402921 2.4:-20312727 MS.gene059738:CDS
CACCATTCCATCAAAATTCC+CGG 0.405073 2.4:+20312741 None:intergenic
AATGAACGGTGGAGAGATAG+TGG 0.417558 2.4:-20313247 MS.gene059738:CDS
CAAGCGGGTGGTTCGGGTGC+CGG 0.418610 2.4:-20312481 MS.gene059738:CDS
AAAGCCACCAGAAGCAAATC+CGG 0.422822 2.4:+20312462 None:intergenic
CGTAAAATTCAATAGCGGTA+TGG 0.430606 2.4:+20313121 None:intergenic
AGTGGTGGCGGTGGTGTTTG+TGG 0.432832 2.4:-20312676 MS.gene059738:CDS
ACGAACTGAAGGATTGTAAC+TGG 0.446835 2.4:+20312552 None:intergenic
AAGATCGACTGGGCTTTGAT+AGG 0.456624 2.4:-20313092 MS.gene059738:CDS
GTAAAGTTTGCACGGCGAAA+GGG 0.459864 2.4:-20313173 MS.gene059738:CDS
GTAAAATTCAATAGCGGTAT+GGG 0.466376 2.4:+20313122 None:intergenic
TCAAAATGAAATACCTGAAA+CGG 0.483741 2.4:-20312851 MS.gene059738:CDS
TTGAAAAGAGTGGGTTTCCA+TGG 0.485913 2.4:+20313000 None:intergenic
ACAATCCTTCAGTTCGTGCT+TGG 0.487224 2.4:-20312546 MS.gene059738:CDS
AGTAAAGTTTGCACGGCGAA+AGG 0.487726 2.4:-20313174 MS.gene059738:CDS
AGACAGACGCGTCCGTCTCT+CGG 0.489881 2.4:-20313145 MS.gene059738:CDS
TCATGGTTCTTCACCGTCGC+CGG 0.490507 2.4:-20312638 MS.gene059738:CDS
TTACGATGTTCAAGATCGAC+TGG 0.498681 2.4:-20313103 MS.gene059738:CDS
GGCCCAGTAAAGCACTTGAT+TGG 0.499781 2.4:-20313071 MS.gene059738:CDS
CTAAATTCAACGGTGAGAAT+CGG 0.501877 2.4:+20312354 None:intergenic
TGCATGGCGGTTTATCTGAC+AGG 0.502645 2.4:-20312393 MS.gene059738:CDS
GGTGCTGCTACTATTGATAC+TGG 0.504487 2.4:-20312700 MS.gene059738:CDS
CGTGTGCCGGCACGAATTGG+AGG 0.505599 2.4:-20312430 MS.gene059738:CDS
TGAGCTAGTTGGTCGATGGC+AGG 0.515161 2.4:+20313030 None:intergenic
GCTACTATTGATACTGGTAG+TGG 0.527342 2.4:-20312694 MS.gene059738:CDS
CTCCAATTCGTGCCGGCACA+CGG 0.530036 2.4:+20312431 None:intergenic
AGGATTGTAACTGGACTGAA+GGG 0.547857 2.4:+20312561 None:intergenic
AACTAGCTCATCTTCCTCCA+TGG 0.551683 2.4:-20313017 MS.gene059738:CDS
AGACGGACGCGTCTGTCTCT+CGG 0.552176 2.4:+20313150 None:intergenic
TAGCGGTATGGGCCGAGAGA+CGG 0.558275 2.4:+20313133 None:intergenic
GGCTGATTATCGACGTCAAG+CGG 0.558536 2.4:-20312497 MS.gene059738:CDS
GTGACGTGGAATTCCGGTGG+TGG 0.563932 2.4:-20312721 MS.gene059738:CDS
GGAGAGATAGTGGAAGTTGA+CGG 0.564631 2.4:-20313237 MS.gene059738:CDS
GGTGCCGGATTTGCTTCTGG+TGG 0.566408 2.4:-20312466 MS.gene059738:CDS
AGCCAATCAAGTGCTTTACT+GGG 0.566827 2.4:+20313069 None:intergenic
TGCTCCGACGACGTTTGTTG+CGG 0.572974 2.4:-20312518 MS.gene059738:CDS
AAGGATTGTAACTGGACTGA+AGG 0.573483 2.4:+20312560 None:intergenic
TGGTTCTTCACCGTCGCCGG+TGG 0.584121 2.4:-20312635 MS.gene059738:CDS
ATGGAGGAAGATGAGCTAGT+TGG 0.585948 2.4:+20313019 None:intergenic
GCTGATTATCGACGTCAAGC+GGG 0.587761 2.4:-20312496 MS.gene059738:CDS
TCTATCCAAGCACGAACTGA+AGG 0.592530 2.4:+20312541 None:intergenic
GAATCAGTATCTTTCACAGA+GGG 0.594638 2.4:-20312587 MS.gene059738:CDS
AATAGTAGCAGCACCACCAC+CGG 0.596186 2.4:+20312708 None:intergenic
TCATCACCTCCAATTCGTGC+CGG 0.596792 2.4:+20312424 None:intergenic
GATTATGGAGGAATAATGAA+CGG 0.602608 2.4:-20313261 None:intergenic
TTCTGACCATACATCACCGC+CGG 0.603722 2.4:+20312607 None:intergenic
TATGGAGGAATAATGAACGG+TGG 0.607439 2.4:-20313258 None:intergenic
ATTGATACTGGTAGTGGTGG+CGG 0.619170 2.4:-20312688 MS.gene059738:CDS
ACGAATTGGAGGTGATGATG+AGG 0.624959 2.4:-20312419 MS.gene059738:CDS
TACGATGTTCAAGATCGACT+GGG 0.627373 2.4:-20313102 MS.gene059738:CDS
TCGTCATAGTAAAGTTTGCA+CGG 0.630099 2.4:-20313181 MS.gene059738:CDS
GATACTGGTAGTGGTGGCGG+TGG 0.632202 2.4:-20312685 MS.gene059738:CDS
AAGATGAGCTAGTTGGTCGA+TGG 0.633600 2.4:+20313026 None:intergenic
GATTATCGACGTCAAGCGGG+TGG 0.637375 2.4:-20312493 MS.gene059738:CDS
AATTCAACGGTGAGAATCGG+AGG 0.639835 2.4:+20312357 None:intergenic
AAAAGAGTGGGTTTCCATGG+AGG 0.642106 2.4:+20313003 None:intergenic
GGTCACATTATAAGGTCAAG+AGG 0.643297 2.4:-20313213 MS.gene059738:CDS
ATGGTGACGTGGAATTCCGG+TGG 0.669456 2.4:-20312724 MS.gene059738:CDS
AACATCGTAAAATTCAATAG+CGG 0.671747 2.4:+20313116 None:intergenic
ACTATTGATACTGGTAGTGG+TGG 0.683426 2.4:-20312691 MS.gene059738:CDS
TCAGCCGCAACAAACGTCGT+CGG 0.685416 2.4:+20312514 None:intergenic
GAATCGGAGGAAGCAGACGA+CGG 0.698314 2.4:+20312370 None:intergenic
GGTGATGATGAGGAGATGCA+TGG 0.698910 2.4:-20312409 MS.gene059738:CDS
GGATTGTAACTGGACTGAAG+GGG 0.704803 2.4:+20312562 None:intergenic
GAGATAGTGGAAGTTGACGG+AGG 0.723378 2.4:-20313234 MS.gene059738:CDS
AATCAGTATCTTTCACAGAG+GGG 0.746034 2.4:-20312586 MS.gene059738:CDS
AGAATCAGTATCTTTCACAG+AGG 0.756640 2.4:-20312588 MS.gene059738:CDS
GATGATGAGGAGATGCATGG+CGG 0.819316 2.4:-20312406 MS.gene059738:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AACATCGTAAAATTCAATAG+CGG + chr2.4:20312493-20312512 None:intergenic 25.0%
! TCAAAATGAAATACCTGAAA+CGG - chr2.4:20312755-20312774 MS.gene059738:CDS 25.0%
!!! TCAGGTATTTCATTTTGAAA+CGG + chr2.4:20312753-20312772 None:intergenic 25.0%
GTAAAATTCAATAGCGGTAT+GGG + chr2.4:20312487-20312506 None:intergenic 30.0%
!!! TTTTGCTGTTTGAAAAGAGT+GGG + chr2.4:20312618-20312637 None:intergenic 30.0%
AATCAGTATCTTTCACAGAG+GGG - chr2.4:20313020-20313039 MS.gene059738:CDS 35.0%
AGAATCAGTATCTTTCACAG+AGG - chr2.4:20313018-20313037 MS.gene059738:CDS 35.0%
CGTAAAATTCAATAGCGGTA+TGG + chr2.4:20312488-20312507 None:intergenic 35.0%
GAATCAGTATCTTTCACAGA+GGG - chr2.4:20313019-20313038 MS.gene059738:CDS 35.0%
TCGTCATAGTAAAGTTTGCA+CGG - chr2.4:20312425-20312444 MS.gene059738:CDS 35.0%
!!! CTTTTGCTGTTTGAAAAGAG+TGG + chr2.4:20312619-20312638 None:intergenic 35.0%
AAGGATTGTAACTGGACTGA+AGG + chr2.4:20313049-20313068 None:intergenic 40.0%
ACGAACTGAAGGATTGTAAC+TGG + chr2.4:20313057-20313076 None:intergenic 40.0%
AGCCAATCAAGTGCTTTACT+GGG + chr2.4:20312540-20312559 None:intergenic 40.0%
AGGATTGTAACTGGACTGAA+GGG + chr2.4:20313048-20313067 None:intergenic 40.0%
CACCATTCCATCAAAATTCC+CGG + chr2.4:20312868-20312887 None:intergenic 40.0%
GCTACTATTGATACTGGTAG+TGG - chr2.4:20312912-20312931 MS.gene059738:CDS 40.0%
GGTCACATTATAAGGTCAAG+AGG - chr2.4:20312393-20312412 MS.gene059738:CDS 40.0%
TACGATGTTCAAGATCGACT+GGG - chr2.4:20312504-20312523 MS.gene059738:CDS 40.0%
TTACGATGTTCAAGATCGAC+TGG - chr2.4:20312503-20312522 MS.gene059738:CDS 40.0%
TTACTAAACGACACCGTTTC+AGG + chr2.4:20312771-20312790 None:intergenic 40.0%
TTGACGGAGGTCACATTATA+AGG - chr2.4:20312385-20312404 MS.gene059738:CDS 40.0%
! TTGAAAAGAGTGGGTTTCCA+TGG + chr2.4:20312609-20312628 None:intergenic 40.0%
!! ACTATTGATACTGGTAGTGG+TGG - chr2.4:20312915-20312934 MS.gene059738:CDS 40.0%
!! ATTTTGATGGAATGGTGACG+TGG - chr2.4:20312871-20312890 MS.gene059738:CDS 40.0%
!!! GGTGATGGTTTTGTGTTTCA+TGG - chr2.4:20312951-20312970 MS.gene059738:CDS 40.0%
AAAGCCACCAGAAGCAAATC+CGG + chr2.4:20313147-20313166 None:intergenic 45.0%
AACTAGCTCATCTTCCTCCA+TGG - chr2.4:20312589-20312608 MS.gene059738:CDS 45.0%
AAGATGAGCTAGTTGGTCGA+TGG + chr2.4:20312583-20312602 None:intergenic 45.0%
ACAATCCTTCAGTTCGTGCT+TGG - chr2.4:20313060-20313079 MS.gene059738:CDS 45.0%
AGTAAAGTTTGCACGGCGAA+AGG - chr2.4:20312432-20312451 MS.gene059738:CDS 45.0%
ATGGAGGAAGATGAGCTAGT+TGG + chr2.4:20312590-20312609 None:intergenic 45.0%
GAGCCAATCAAGTGCTTTAC+TGG + chr2.4:20312541-20312560 None:intergenic 45.0%
GGATTGTAACTGGACTGAAG+GGG + chr2.4:20313047-20313066 None:intergenic 45.0%
GTAAAGTTTGCACGGCGAAA+GGG - chr2.4:20312433-20312452 MS.gene059738:CDS 45.0%
TCTATCCAAGCACGAACTGA+AGG + chr2.4:20313068-20313087 None:intergenic 45.0%
! AAAAGAGTGGGTTTCCATGG+AGG + chr2.4:20312606-20312625 None:intergenic 45.0%
! AAGATCGACTGGGCTTTGAT+AGG - chr2.4:20312514-20312533 MS.gene059738:CDS 45.0%
! ACGAATTGGAGGTGATGATG+AGG - chr2.4:20313187-20313206 MS.gene059738:CDS 45.0%
! CTTTTCGCCGGGAATTTTGA+TGG - chr2.4:20312858-20312877 MS.gene059738:CDS 45.0%
! TTTGCTTCTGGTGGCTTTTC+TGG - chr2.4:20313149-20313168 MS.gene059738:CDS 45.0%
!! ATTGATACTGGTAGTGGTGG+CGG - chr2.4:20312918-20312937 MS.gene059738:CDS 45.0%
!! GGAGAGATAGTGGAAGTTGA+CGG - chr2.4:20312369-20312388 MS.gene059738:CDS 45.0%
!! GGTGCTGCTACTATTGATAC+TGG - chr2.4:20312906-20312925 MS.gene059738:CDS 45.0%
AATAGTAGCAGCACCACCAC+CGG + chr2.4:20312901-20312920 None:intergenic 50.0%
GATGATGAGGAGATGCATGG+CGG - chr2.4:20313200-20313219 MS.gene059738:CDS 50.0%
GCTGATTATCGACGTCAAGC+GGG - chr2.4:20313110-20313129 MS.gene059738:CDS 50.0%
GGCTGATTATCGACGTCAAG+CGG - chr2.4:20313109-20313128 MS.gene059738:CDS 50.0%
TCATCACCTCCAATTCGTGC+CGG + chr2.4:20313185-20313204 None:intergenic 50.0%
TGCATGGCGGTTTATCTGAC+AGG - chr2.4:20313213-20313232 MS.gene059738:CDS 50.0%
TTCTGACCATACATCACCGC+CGG + chr2.4:20313002-20313021 None:intergenic 50.0%
! GGAATGGTGACGTGGAATTC+CGG - chr2.4:20312879-20312898 MS.gene059738:CDS 50.0%
! GGCCCAGTAAAGCACTTGAT+TGG - chr2.4:20312535-20312554 MS.gene059738:CDS 50.0%
! GGTGATGATGAGGAGATGCA+TGG - chr2.4:20313197-20313216 MS.gene059738:CDS 50.0%
! GTTTTTCCGGCGGTGATGTA+TGG - chr2.4:20312993-20313012 MS.gene059738:CDS 50.0%
!! CGCCGGGAATTTTGATGGAA+TGG - chr2.4:20312863-20312882 MS.gene059738:CDS 50.0%
!! GAGATAGTGGAAGTTGACGG+AGG - chr2.4:20312372-20312391 MS.gene059738:CDS 50.0%
!!! CTTTTCTGGTTTCCGTGTGC+CGG - chr2.4:20313163-20313182 MS.gene059738:CDS 50.0%
ATCACCGCCGGAAAAACCAC+CGG + chr2.4:20312990-20313009 None:intergenic 55.0%
GAATCGGAGGAAGCAGACGA+CGG + chr2.4:20313239-20313258 None:intergenic 55.0%
GATTATCGACGTCAAGCGGG+TGG - chr2.4:20313113-20313132 MS.gene059738:CDS 55.0%
TCAGCCGCAACAAACGTCGT+CGG + chr2.4:20313095-20313114 None:intergenic 55.0%
TCATGGTTCTTCACCGTCGC+CGG - chr2.4:20312968-20312987 MS.gene059738:CDS 55.0%
TGAGCTAGTTGGTCGATGGC+AGG + chr2.4:20312579-20312598 None:intergenic 55.0%
! AACAGCACGTGCTTTTCGCC+GGG - chr2.4:20312847-20312866 MS.gene059738:CDS 55.0%
! ATGGTGACGTGGAATTCCGG+TGG - chr2.4:20312882-20312901 MS.gene059738:CDS 55.0%
! CAACAGCACGTGCTTTTCGC+CGG - chr2.4:20312846-20312865 MS.gene059738:CDS 55.0%
! TGCTCCGACGACGTTTGTTG+CGG - chr2.4:20313088-20313107 MS.gene059738:CDS 55.0%
AGACAGACGCGTCCGTCTCT+CGG - chr2.4:20312461-20312480 MS.gene059738:CDS 60.0%
AGACGGACGCGTCTGTCTCT+CGG + chr2.4:20312459-20312478 None:intergenic 60.0%
GGCGGTGGTGTTTGTGGTGA+TGG - chr2.4:20312936-20312955 MS.gene059738:CDS 60.0%
GTGACGTGGAATTCCGGTGG+TGG - chr2.4:20312885-20312904 MS.gene059738:CDS 60.0%
TAGCGGTATGGGCCGAGAGA+CGG + chr2.4:20312476-20312495 None:intergenic 60.0%
TCGACGTCAAGCGGGTGGTT+CGG - chr2.4:20313118-20313137 MS.gene059738:CDS 60.0%
! ACCGTCGCCGGTGGTTTTTC+CGG - chr2.4:20312980-20312999 MS.gene059738:CDS 60.0%
! CTCCAATTCGTGCCGGCACA+CGG + chr2.4:20313178-20313197 None:intergenic 60.0%
! GGTGCCGGATTTGCTTCTGG+TGG - chr2.4:20313140-20313159 MS.gene059738:CDS 60.0%
! TTCCGTGTGCCGGCACGAAT+TGG - chr2.4:20313173-20313192 MS.gene059738:CDS 60.0%
!! AGTGGTGGCGGTGGTGTTTG+TGG - chr2.4:20312930-20312949 MS.gene059738:CDS 60.0%
!! GATACTGGTAGTGGTGGCGG+TGG - chr2.4:20312921-20312940 MS.gene059738:CDS 60.0%
!! TCGGGTGCCGGATTTGCTTC+TGG - chr2.4:20313137-20313156 MS.gene059738:CDS 60.0%
CGACGTCAAGCGGGTGGTTC+GGG - chr2.4:20313119-20313138 MS.gene059738:CDS 65.0%
GCCGGAAAAACCACCGGCGA+CGG + chr2.4:20312984-20313003 None:intergenic 65.0%
TGGTTCTTCACCGTCGCCGG+TGG - chr2.4:20312971-20312990 MS.gene059738:CDS 65.0%
! CGTGTGCCGGCACGAATTGG+AGG - chr2.4:20313176-20313195 MS.gene059738:CDS 65.0%
! GTCGCCGGTGGTTTTTCCGG+CGG - chr2.4:20312983-20313002 MS.gene059738:CDS 65.0%
! CAAGCGGGTGGTTCGGGTGC+CGG - chr2.4:20313125-20313144 MS.gene059738:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 20312360 20313268 20312360 ID=MS.gene059738
chr2.4 mRNA 20312360 20313268 20312360 ID=MS.gene059738.t1;Parent=MS.gene059738
chr2.4 exon 20312360 20313268 20312360 ID=MS.gene059738.t1.exon1;Parent=MS.gene059738.t1
chr2.4 CDS 20312360 20313268 20312360 ID=cds.MS.gene059738.t1;Parent=MS.gene059738.t1
Gene Sequence

>MS.gene059738

ATGAACGGTGGAGAGATAGTGGAAGTTGACGGAGGTCACATTATAAGGTCAAGAGGTCGTAAAGATCGTCATAGTAAAGTTTGCACGGCGAAAGGGCCGAGAGACAGACGCGTCCGTCTCTCGGCCCATACCGCTATTGAATTTTACGATGTTCAAGATCGACTGGGCTTTGATAGGCCCAGTAAAGCACTTGATTGGCTCATTAATAAAGCTAAGCCTGCCATCGACCAACTAGCTCATCTTCCTCCATGGAAACCCACTCTTTTCAAACAGCAAAAGCAAAAGCAAAACGACGACGTTTTAGAGAAACAGAATCAAAACGAAAACGAAAACAACGAGTTTCGTTTTCTACAGAATTTTAGCAATAATAGTAACAGCAACTGTTTCATTCCGTTTCAAAATGAAATACCTGAAACGGTGTCGTTTAGTAATGATTTGAAGCTTTCGCTTCAACAGAATCAGAATCAGAATCAGAATCAACACGTGCAACAGCACGTGCTTTTCGCCGGGAATTTTGATGGAATGGTGACGTGGAATTCCGGTGGTGGTGCTGCTACTATTGATACTGGTAGTGGTGGCGGTGGTGTTTGTGGTGATGGTTTTGTGTTTCATGGTTCTTCACCGTCGCCGGTGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCACAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATGCTCCGACGACGTTTGTTGCGGCTGATTATCGACGTCAAGCGGGTGGTTCGGGTGCCGGATTTGCTTCTGGTGGCTTTTCTGGTTTCCGTGTGCCGGCACGAATTGGAGGTGATGATGAGGAGATGCATGGCGGTTTATCTGACAGGCCGTCGTCTGCTTCCTCCGATTCTCACCGTTGA
Protein sequence

>MS.gene059738.t1

MNGGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLAHLPPWKPTLFKQQKQKQNDDVLEKQNQNENENNEFRFLQNFSNNSNSNCFIPFQNEIPETVSFSNDLKLSLQQNQNQNQNQHVQQHVLFAGNFDGMVTWNSGGGAATIDTGSGGGGVCGDGFVFHGSSPSPVVFPAVMYGQNQYLSQRGPLQSSYNPSVRAWIDAPTTFVAADYRRQAGGSGAGFASGGFSGFRVPARIGGDDEEMHGGLSDRPSSASSDSHR