Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060894.t1 | KEH39872.1 | 86.9 | 535 | 61 | 1 | 1 | 526 | 1 | 535 | 4.20E-266 | 927.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060894.t1 | Q9S775 | 66.0 | 535 | 160 | 5 | 1 | 526 | 1 | 522 | 2.4e-201 | 703.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060894.t1 | A0A072VDM6 | 86.9 | 535 | 61 | 1 | 1 | 526 | 1 | 535 | 3.0e-266 | 927.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene060894.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060894.t1 | MTR_1g013190 | 85.981 | 535 | 66 | 1 | 1 | 526 | 1 | 535 | 0.0 | 941 |
MS.gene060894.t1 | MTR_3g106210 | 72.356 | 539 | 134 | 5 | 1 | 526 | 1 | 537 | 0.0 | 786 |
MS.gene060894.t1 | MTR_3g106210 | 72.356 | 539 | 134 | 5 | 1 | 526 | 1 | 537 | 0.0 | 786 |
MS.gene060894.t1 | MTR_3g106210 | 72.356 | 539 | 134 | 5 | 1 | 526 | 1 | 537 | 0.0 | 783 |
MS.gene060894.t1 | MTR_3g106210 | 72.356 | 539 | 134 | 5 | 1 | 526 | 1 | 537 | 0.0 | 783 |
MS.gene060894.t1 | MTR_5g090090 | 40.587 | 409 | 208 | 11 | 132 | 520 | 455 | 848 | 1.51e-85 | 292 |
MS.gene060894.t1 | MTR_5g090090 | 40.196 | 408 | 211 | 10 | 132 | 520 | 455 | 848 | 3.61e-85 | 292 |
MS.gene060894.t1 | MTR_3g053910 | 38.235 | 408 | 219 | 10 | 132 | 520 | 409 | 802 | 5.95e-81 | 280 |
MS.gene060894.t1 | MTR_3g053910 | 38.235 | 408 | 219 | 10 | 132 | 520 | 438 | 831 | 7.33e-81 | 280 |
MS.gene060894.t1 | MTR_4g096930 | 41.667 | 396 | 205 | 11 | 132 | 520 | 592 | 968 | 7.82e-79 | 274 |
MS.gene060894.t1 | MTR_5g020000 | 40.000 | 285 | 140 | 7 | 249 | 515 | 148 | 419 | 6.35e-49 | 182 |
MS.gene060894.t1 | MTR_1g105050 | 36.770 | 291 | 147 | 6 | 259 | 526 | 341 | 617 | 8.02e-46 | 175 |
MS.gene060894.t1 | MTR_5g005840 | 37.762 | 286 | 141 | 6 | 264 | 526 | 333 | 604 | 8.06e-46 | 175 |
MS.gene060894.t1 | MTR_7g090960 | 35.216 | 301 | 163 | 6 | 281 | 569 | 573 | 853 | 1.55e-44 | 172 |
MS.gene060894.t1 | MTR_7g090960 | 35.216 | 301 | 163 | 6 | 281 | 569 | 492 | 772 | 1.64e-44 | 171 |
MS.gene060894.t1 | MTR_4g118845 | 39.256 | 242 | 128 | 3 | 284 | 520 | 186 | 413 | 3.69e-44 | 170 |
MS.gene060894.t1 | MTR_4g118845 | 39.167 | 240 | 127 | 3 | 286 | 520 | 1 | 226 | 1.55e-43 | 168 |
MS.gene060894.t1 | MTR_2g020000 | 38.843 | 242 | 129 | 3 | 284 | 520 | 189 | 416 | 6.76e-43 | 166 |
MS.gene060894.t1 | MTR_1g053955 | 36.271 | 295 | 155 | 7 | 280 | 560 | 515 | 790 | 1.67e-41 | 162 |
MS.gene060894.t1 | MTR_4g118720 | 39.062 | 256 | 115 | 7 | 278 | 509 | 997 | 1235 | 5.95e-41 | 161 |
MS.gene060894.t1 | MTR_7g039320 | 40.359 | 223 | 124 | 4 | 284 | 502 | 37 | 254 | 3.01e-40 | 158 |
MS.gene060894.t1 | MTR_7g039320 | 40.359 | 223 | 124 | 4 | 284 | 502 | 37 | 254 | 3.27e-40 | 158 |
MS.gene060894.t1 | MTR_7g078090 | 34.021 | 291 | 158 | 4 | 278 | 548 | 986 | 1262 | 3.11e-37 | 149 |
MS.gene060894.t1 | MTR_8g030550 | 32.990 | 291 | 160 | 5 | 278 | 548 | 979 | 1254 | 8.32e-36 | 145 |
MS.gene060894.t1 | MTR_8g030550 | 32.990 | 291 | 160 | 5 | 278 | 548 | 979 | 1254 | 9.79e-36 | 145 |
MS.gene060894.t1 | MTR_8g030550 | 32.990 | 291 | 160 | 5 | 278 | 548 | 979 | 1254 | 1.05e-35 | 145 |
MS.gene060894.t1 | MTR_1g035330 | 36.066 | 244 | 132 | 7 | 286 | 516 | 195 | 427 | 2.61e-34 | 139 |
MS.gene060894.t1 | MTR_7g045505 | 37.553 | 237 | 122 | 6 | 312 | 527 | 16 | 247 | 8.44e-34 | 138 |
MS.gene060894.t1 | MTR_7g045505 | 37.553 | 237 | 122 | 6 | 312 | 527 | 16 | 247 | 9.28e-34 | 138 |
MS.gene060894.t1 | MTR_4g035100 | 31.801 | 261 | 136 | 5 | 285 | 520 | 1449 | 1692 | 1.63e-30 | 129 |
MS.gene060894.t1 | MTR_4g035100 | 31.801 | 261 | 136 | 5 | 285 | 520 | 1449 | 1692 | 1.83e-30 | 129 |
MS.gene060894.t1 | MTR_1g069755 | 28.182 | 330 | 181 | 10 | 244 | 520 | 336 | 662 | 1.04e-27 | 120 |
MS.gene060894.t1 | MTR_7g101465 | 26.419 | 458 | 253 | 15 | 54 | 475 | 49 | 458 | 1.22e-25 | 113 |
MS.gene060894.t1 | MTR_4g078495 | 33.810 | 210 | 108 | 5 | 289 | 485 | 134 | 325 | 9.49e-25 | 110 |
MS.gene060894.t1 | MTR_4g078460 | 34.286 | 210 | 107 | 5 | 289 | 485 | 420 | 611 | 1.47e-24 | 110 |
MS.gene060894.t1 | MTR_4g078460 | 34.286 | 210 | 107 | 5 | 289 | 485 | 420 | 611 | 1.93e-24 | 109 |
MS.gene060894.t1 | MTR_8g094070 | 34.842 | 221 | 106 | 7 | 286 | 488 | 385 | 585 | 7.26e-23 | 104 |
MS.gene060894.t1 | MTR_8g094070 | 34.842 | 221 | 106 | 7 | 286 | 488 | 385 | 585 | 8.64e-23 | 104 |
MS.gene060894.t1 | MTR_5g004720 | 31.019 | 216 | 125 | 5 | 286 | 488 | 184 | 388 | 1.61e-21 | 100 |
MS.gene060894.t1 | MTR_1g080420 | 28.879 | 232 | 125 | 5 | 286 | 489 | 713 | 932 | 5.71e-17 | 85.9 |
MS.gene060894.t1 | MTR_1g080420 | 28.879 | 232 | 125 | 5 | 286 | 489 | 582 | 801 | 5.94e-17 | 85.9 |
MS.gene060894.t1 | MTR_1g044120 | 29.000 | 200 | 89 | 8 | 308 | 472 | 536 | 717 | 5.53e-13 | 72.8 |
MS.gene060894.t1 | MTR_7g089190 | 23.529 | 238 | 139 | 7 | 308 | 520 | 252 | 471 | 2.05e-11 | 67.8 |
MS.gene060894.t1 | MTR_2g084630 | 24.151 | 265 | 120 | 7 | 308 | 509 | 406 | 652 | 2.24e-11 | 67.8 |
MS.gene060894.t1 | MTR_2g084630 | 24.151 | 265 | 120 | 7 | 308 | 509 | 400 | 646 | 2.44e-11 | 67.4 |
MS.gene060894.t1 | MTR_4g124090 | 26.923 | 208 | 132 | 8 | 286 | 487 | 174 | 367 | 6.90e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060894.t1 | AT2G25170 | 65.607 | 535 | 162 | 5 | 1 | 526 | 18 | 539 | 0.0 | 703 |
MS.gene060894.t1 | AT2G25170 | 65.607 | 535 | 162 | 5 | 1 | 526 | 1 | 522 | 0.0 | 703 |
MS.gene060894.t1 | AT2G25170 | 65.607 | 535 | 162 | 5 | 1 | 526 | 1 | 522 | 0.0 | 703 |
MS.gene060894.t1 | AT2G25170 | 65.607 | 535 | 162 | 5 | 1 | 526 | 27 | 548 | 0.0 | 702 |
MS.gene060894.t1 | AT4G31900 | 57.042 | 426 | 154 | 7 | 98 | 518 | 43 | 444 | 1.42e-153 | 474 |
MS.gene060894.t1 | AT4G31900 | 57.042 | 426 | 154 | 7 | 98 | 518 | 43 | 444 | 1.63e-153 | 474 |
MS.gene060894.t1 | AT4G31900 | 60.417 | 336 | 109 | 4 | 183 | 518 | 92 | 403 | 7.57e-129 | 408 |
MS.gene060894.t1 | AT2G13370 | 39.216 | 408 | 215 | 10 | 132 | 520 | 463 | 856 | 1.20e-82 | 285 |
MS.gene060894.t1 | AT2G13370 | 39.216 | 408 | 215 | 10 | 132 | 520 | 463 | 856 | 1.20e-82 | 285 |
MS.gene060894.t1 | AT2G13370 | 39.216 | 408 | 215 | 10 | 132 | 520 | 463 | 856 | 1.20e-82 | 285 |
MS.gene060894.t1 | AT5G44800 | 39.618 | 419 | 220 | 12 | 113 | 520 | 527 | 923 | 1.63e-72 | 255 |
MS.gene060894.t1 | AT5G19310 | 39.773 | 264 | 129 | 5 | 278 | 526 | 114 | 362 | 4.16e-46 | 175 |
MS.gene060894.t1 | AT5G19310 | 39.773 | 264 | 129 | 5 | 278 | 526 | 378 | 626 | 8.30e-46 | 175 |
MS.gene060894.t1 | AT5G66750 | 37.793 | 299 | 148 | 9 | 243 | 520 | 160 | 441 | 1.96e-45 | 173 |
MS.gene060894.t1 | AT5G18620 | 40.083 | 242 | 126 | 3 | 284 | 520 | 192 | 419 | 3.04e-44 | 171 |
MS.gene060894.t1 | AT5G18620 | 40.083 | 242 | 126 | 3 | 284 | 520 | 192 | 419 | 3.15e-44 | 171 |
MS.gene060894.t1 | AT3G06010 | 38.462 | 273 | 131 | 6 | 260 | 509 | 369 | 627 | 3.69e-44 | 170 |
MS.gene060894.t1 | AT3G06400 | 39.256 | 242 | 128 | 3 | 284 | 520 | 187 | 414 | 1.39e-43 | 168 |
MS.gene060894.t1 | AT3G06400 | 39.256 | 242 | 128 | 3 | 284 | 520 | 187 | 414 | 1.54e-43 | 168 |
MS.gene060894.t1 | AT3G06400 | 39.256 | 242 | 128 | 3 | 284 | 520 | 187 | 414 | 1.54e-43 | 168 |
MS.gene060894.t1 | AT3G57300 | 35.570 | 298 | 160 | 7 | 284 | 569 | 584 | 861 | 2.27e-42 | 165 |
MS.gene060894.t1 | AT3G57300 | 35.570 | 298 | 160 | 7 | 284 | 569 | 584 | 861 | 2.32e-42 | 165 |
MS.gene060894.t1 | AT3G57300 | 35.570 | 298 | 160 | 7 | 284 | 569 | 584 | 861 | 2.32e-42 | 165 |
MS.gene060894.t1 | AT3G12810 | 38.431 | 255 | 129 | 5 | 280 | 521 | 526 | 765 | 1.32e-40 | 160 |
MS.gene060894.t1 | AT3G12810 | 38.431 | 255 | 129 | 5 | 280 | 521 | 530 | 769 | 1.46e-40 | 160 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 671 | 984 | 3.29e-40 | 159 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 671 | 984 | 3.47e-40 | 159 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 671 | 984 | 3.47e-40 | 159 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 672 | 985 | 3.47e-40 | 159 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 671 | 984 | 4.17e-40 | 159 |
MS.gene060894.t1 | AT2G28290 | 33.535 | 331 | 158 | 7 | 224 | 509 | 672 | 985 | 4.17e-40 | 159 |
MS.gene060894.t1 | AT3G57300 | 32.424 | 330 | 160 | 8 | 284 | 569 | 584 | 894 | 3.16e-38 | 152 |
MS.gene060894.t1 | AT2G46020 | 31.707 | 328 | 188 | 4 | 241 | 548 | 938 | 1249 | 1.02e-37 | 151 |
MS.gene060894.t1 | AT2G46020 | 31.707 | 328 | 188 | 4 | 241 | 548 | 938 | 1249 | 1.02e-37 | 151 |
MS.gene060894.t1 | AT2G46020 | 31.707 | 328 | 188 | 4 | 241 | 548 | 938 | 1249 | 1.02e-37 | 151 |
MS.gene060894.t1 | AT2G44980 | 42.105 | 209 | 113 | 5 | 284 | 489 | 49 | 252 | 3.34e-37 | 149 |
MS.gene060894.t1 | AT2G46020 | 31.611 | 329 | 186 | 5 | 241 | 548 | 938 | 1248 | 9.04e-37 | 148 |
MS.gene060894.t1 | AT2G46020 | 31.611 | 329 | 186 | 5 | 241 | 548 | 938 | 1248 | 9.04e-37 | 148 |
MS.gene060894.t1 | AT2G46020 | 31.611 | 329 | 186 | 5 | 241 | 548 | 938 | 1248 | 9.04e-37 | 148 |
MS.gene060894.t1 | AT2G02090 | 36.475 | 244 | 131 | 7 | 286 | 516 | 213 | 445 | 3.67e-35 | 142 |
MS.gene060894.t1 | AT2G44980 | 41.429 | 210 | 114 | 6 | 284 | 489 | 49 | 253 | 4.93e-35 | 142 |
MS.gene060894.t1 | AT2G44980 | 38.991 | 218 | 118 | 6 | 284 | 497 | 49 | 255 | 6.25e-33 | 135 |
MS.gene060894.t1 | AT3G54280 | 30.915 | 317 | 172 | 9 | 232 | 520 | 1396 | 1693 | 1.12e-31 | 132 |
MS.gene060894.t1 | AT3G54280 | 30.915 | 317 | 172 | 9 | 232 | 520 | 1427 | 1724 | 1.20e-31 | 132 |
MS.gene060894.t1 | AT1G03750 | 34.419 | 215 | 106 | 3 | 286 | 485 | 139 | 333 | 1.09e-28 | 122 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 385 | 649 | 1.06e-25 | 113 |
MS.gene060894.t1 | AT2G18760 | 31.835 | 267 | 143 | 8 | 286 | 515 | 444 | 708 | 1.22e-25 | 113 |
MS.gene060894.t1 | AT5G63950 | 29.430 | 316 | 164 | 11 | 278 | 554 | 370 | 665 | 1.71e-24 | 109 |
MS.gene060894.t1 | AT5G63950 | 29.605 | 304 | 162 | 12 | 278 | 554 | 370 | 648 | 2.35e-22 | 102 |
MS.gene060894.t1 | AT3G19210 | 29.358 | 218 | 126 | 6 | 286 | 488 | 180 | 384 | 5.91e-20 | 95.1 |
MS.gene060894.t1 | AT3G19210 | 29.358 | 218 | 126 | 6 | 286 | 488 | 180 | 384 | 6.86e-20 | 95.1 |
MS.gene060894.t1 | AT3G19210 | 29.358 | 218 | 126 | 6 | 286 | 488 | 180 | 384 | 8.31e-20 | 94.7 |
MS.gene060894.t1 | AT1G08600 | 31.795 | 195 | 108 | 6 | 300 | 489 | 743 | 917 | 2.57e-17 | 87.0 |
MS.gene060894.t1 | AT1G02670 | 28.112 | 249 | 143 | 6 | 247 | 477 | 58 | 288 | 3.58e-17 | 85.9 |
MS.gene060894.t1 | AT1G02670 | 28.112 | 249 | 143 | 6 | 247 | 477 | 85 | 315 | 3.69e-17 | 85.5 |
MS.gene060894.t1 | AT1G02670 | 28.112 | 249 | 143 | 6 | 247 | 477 | 58 | 288 | 4.60e-17 | 85.5 |
MS.gene060894.t1 | AT1G02670 | 28.112 | 249 | 143 | 6 | 247 | 477 | 85 | 315 | 4.73e-17 | 85.5 |
MS.gene060894.t1 | AT1G02670 | 28.112 | 249 | 143 | 6 | 247 | 477 | 85 | 315 | 4.88e-17 | 85.5 |
MS.gene060894.t1 | AT1G02670 | 29.834 | 181 | 93 | 4 | 308 | 471 | 157 | 320 | 6.69e-16 | 82.0 |
MS.gene060894.t1 | AT1G02670 | 29.834 | 181 | 93 | 4 | 308 | 471 | 146 | 309 | 8.26e-16 | 81.6 |
MS.gene060894.t1 | AT3G16600 | 27.083 | 240 | 142 | 9 | 278 | 488 | 46 | 281 | 1.14e-14 | 77.8 |
MS.gene060894.t1 | AT2G21450 | 29.167 | 192 | 130 | 4 | 286 | 472 | 272 | 462 | 7.08e-14 | 75.5 |
MS.gene060894.t1 | AT2G21450 | 29.167 | 192 | 130 | 4 | 286 | 472 | 174 | 364 | 7.56e-14 | 75.5 |
MS.gene060894.t1 | AT2G21450 | 29.167 | 192 | 130 | 4 | 286 | 472 | 265 | 455 | 8.02e-14 | 75.5 |
MS.gene060894.t1 | AT5G07810 | 29.064 | 203 | 110 | 7 | 285 | 478 | 203 | 380 | 1.02e-13 | 75.5 |
MS.gene060894.t1 | AT1G48310 | 27.982 | 218 | 132 | 8 | 274 | 483 | 161 | 361 | 6.47e-13 | 72.0 |
MS.gene060894.t1 | AT1G48310 | 27.982 | 218 | 132 | 8 | 274 | 483 | 161 | 361 | 6.98e-13 | 72.4 |
MS.gene060894.t1 | AT1G48310 | 27.982 | 218 | 132 | 8 | 274 | 483 | 166 | 366 | 7.08e-13 | 72.4 |
MS.gene060894.t1 | AT1G48310 | 27.982 | 218 | 132 | 8 | 274 | 483 | 161 | 361 | 8.67e-13 | 72.0 |
MS.gene060894.t1 | AT5G22750 | 24.476 | 286 | 131 | 10 | 308 | 526 | 416 | 683 | 8.85e-13 | 72.4 |
MS.gene060894.t1 | AT2G16390 | 28.934 | 197 | 128 | 6 | 283 | 472 | 350 | 541 | 9.38e-13 | 72.0 |
MS.gene060894.t1 | AT2G16390 | 29.381 | 194 | 125 | 6 | 286 | 472 | 350 | 538 | 9.69e-13 | 72.0 |
Find 135 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAAAGTGGATCCGAAAATT+TGG | 0.164054 | 1.2:-8397581 | MS.gene060894:CDS |
CATAGCCCCGGATTTCTTTC+AGG | 0.189754 | 1.2:-8396404 | MS.gene060894:CDS |
TGATGTCCTTAAACTCTTCT+TGG | 0.228699 | 1.2:+8394521 | None:intergenic |
GTGAAAACTTCGATTCATTC+AGG | 0.230456 | 1.2:+8393419 | None:intergenic |
GATTCAATATATTTCGTTCT+AGG | 0.231194 | 1.2:-8396517 | MS.gene060894:CDS |
CACTTTCTACACTACAAAAC+TGG | 0.252886 | 1.2:-8395990 | MS.gene060894:CDS |
AGTATTGGACTTACACATTC+AGG | 0.261513 | 1.2:+8397732 | None:intergenic |
AGAGTTCCAAGAAGAGTTTA+AGG | 0.282522 | 1.2:-8394527 | MS.gene060894:CDS |
CTATGACGTGGATGTAAATT+CGG | 0.303489 | 1.2:+8393447 | None:intergenic |
CGATGAACCGTAGTCCATTC+AGG | 0.311680 | 1.2:+8397186 | None:intergenic |
GAAAGTGGATCCGAAAATTT+GGG | 0.323877 | 1.2:-8397580 | MS.gene060894:CDS |
TTCAATCCCTCAAGTTGATA+TGG | 0.340274 | 1.2:+8396266 | None:intergenic |
TGTTATACTTGCTGATGAAA+TGG | 0.341387 | 1.2:-8396210 | MS.gene060894:CDS |
GAAGGGCTTAATATACATAA+TGG | 0.343359 | 1.2:-8393552 | MS.gene060894:CDS |
TTGTTTCGTCAAACATTGTT+TGG | 0.346817 | 1.2:+8397555 | None:intergenic |
TAAGAAAGCAATACTTTGTA+TGG | 0.354240 | 1.2:+8396059 | None:intergenic |
GGGACTAGGCCTGCATCGGC+AGG | 0.362179 | 1.2:+8393887 | None:intergenic |
GCCTGGCTAACAAACTCTTT+TGG | 0.362764 | 1.2:+8393653 | None:intergenic |
CAAAGCAACCCGCAACAATA+TGG | 0.365303 | 1.2:-8393792 | MS.gene060894:intron |
ATTGACAGGAACTCCTCTTC+AGG | 0.369519 | 1.2:-8395433 | MS.gene060894:intron |
TTCATCGAATACTTGCTTGC+AGG | 0.388267 | 1.2:-8397170 | MS.gene060894:intron |
AAAGCTCCCGTCTTGACAAC+TGG | 0.401938 | 1.2:-8397761 | MS.gene060894:CDS |
TTAGAATTCTTCGGATTCTT+CGG | 0.409217 | 1.2:+8395794 | None:intergenic |
GGACATCAATCAAGAGCAAC+AGG | 0.410466 | 1.2:-8394506 | MS.gene060894:CDS |
CCCACTGTTGCCGGCGAAAG+TGG | 0.413833 | 1.2:-8397595 | MS.gene060894:CDS |
AAGATGCGTCCCACTGTTGC+CGG | 0.415465 | 1.2:-8397604 | MS.gene060894:CDS |
TTTCTGTAGGTTATGTATGT+TGG | 0.417971 | 1.2:-8395863 | MS.gene060894:intron |
AAACATTACCATATTGTTGC+GGG | 0.419505 | 1.2:+8393784 | None:intergenic |
GGCCACGCAGGTTGTGCTGC+AGG | 0.422619 | 1.2:-8393926 | MS.gene060894:intron |
CTTATGCACTTCCTTGATGC+TGG | 0.428463 | 1.2:-8394671 | MS.gene060894:CDS |
TAATATACATAATGGGTAGA+TGG | 0.429423 | 1.2:-8393544 | MS.gene060894:CDS |
TCCAAAAGAGTTTGTTAGCC+AGG | 0.429534 | 1.2:-8393654 | MS.gene060894:CDS |
AAATGAGTAGCTTGGTTGAC+AGG | 0.433236 | 1.2:-8398681 | MS.gene060894:CDS |
TCTAATACCCCTGCCGATGC+AGG | 0.436562 | 1.2:-8393896 | MS.gene060894:CDS |
TGATGCATTTCAGAACAATC+TGG | 0.438877 | 1.2:-8394708 | MS.gene060894:intron |
AATGGCACAAGTCAGAAAAC+TGG | 0.442235 | 1.2:-8397232 | MS.gene060894:CDS |
TGAACTTCCTACGTTTCTCT+TGG | 0.443048 | 1.2:-8396247 | MS.gene060894:CDS |
ACGATGAAAGTTGTTTACTT+TGG | 0.457846 | 1.2:+8397257 | None:intergenic |
GACATCCTCACGCGGGTGCC+AGG | 0.459881 | 1.2:+8393491 | None:intergenic |
AGAGAATGTTTCTCCACATC+TGG | 0.463887 | 1.2:-8396022 | MS.gene060894:CDS |
CTCTAATAGTGCTACGAGCT+TGG | 0.468401 | 1.2:+8395834 | None:intergenic |
TCCCAATGGCATTCATCATA+AGG | 0.469105 | 1.2:+8396581 | None:intergenic |
AAGGGCTTAATATACATAAT+GGG | 0.469741 | 1.2:-8393551 | MS.gene060894:CDS |
GAAAGCAGCACGACCTGCAT+GGG | 0.470922 | 1.2:+8393853 | None:intergenic |
GCCTTCAGAAACTCTTCCTC+TGG | 0.471383 | 1.2:+8397306 | None:intergenic |
TTCGAGGCTTCATACATTGT+TGG | 0.477515 | 1.2:-8394482 | MS.gene060894:CDS |
GTTATACTTGCTGATGAAAT+GGG | 0.478199 | 1.2:-8396209 | MS.gene060894:CDS |
TCCTTATGATGAATGCCATT+GGG | 0.482192 | 1.2:-8396582 | MS.gene060894:CDS |
AGTCTGATCTTCCTTAAAAC+CGG | 0.484034 | 1.2:+8393631 | None:intergenic |
AAACAACTTTCATCGTCAAA+TGG | 0.484760 | 1.2:-8397250 | MS.gene060894:CDS |
GCTTCAATGATGCGGCATCT+TGG | 0.486161 | 1.2:+8395711 | None:intergenic |
GACTAGGCCTGCATCGGCAG+GGG | 0.487693 | 1.2:+8393889 | None:intergenic |
AAAGAGTTTGTTAGCCAGGC+CGG | 0.492899 | 1.2:-8393650 | MS.gene060894:CDS |
CTACATCCATATCAACTTGA+GGG | 0.493022 | 1.2:-8396272 | MS.gene060894:CDS |
TTCCTTATGATGAATGCCAT+TGG | 0.495300 | 1.2:-8396583 | MS.gene060894:CDS |
ATCAAGAGCAACAGGTTTCG+AGG | 0.495690 | 1.2:-8394498 | MS.gene060894:CDS |
ATCTTATCAACATCAATAAG+TGG | 0.496495 | 1.2:+8397637 | None:intergenic |
GATAAAGATGTATACTTCGC+AGG | 0.496598 | 1.2:+8394449 | None:intergenic |
TGAAAACTTCGATTCATTCA+GGG | 0.498877 | 1.2:+8393420 | None:intergenic |
GGACTAGGCCTGCATCGGCA+GGG | 0.501007 | 1.2:+8393888 | None:intergenic |
ATAGCCCCGGATTTCTTTCA+GGG | 0.505132 | 1.2:-8396403 | MS.gene060894:CDS |
TCGTTGCCATTCGACCTGAA+TGG | 0.505730 | 1.2:-8397200 | MS.gene060894:CDS |
TATGACGTGGATGTAAATTC+GGG | 0.509802 | 1.2:+8393448 | None:intergenic |
GCACTTCCTTGATGCTGGGA+AGG | 0.511269 | 1.2:-8394666 | MS.gene060894:intron |
CAGGGACAATGGTGCTGAGA+AGG | 0.514116 | 1.2:-8396630 | MS.gene060894:CDS |
TAAATTCGGGAACGATCAGC+AGG | 0.515892 | 1.2:+8393461 | None:intergenic |
TCAGCAGAAAATGAGTAGCT+TGG | 0.524164 | 1.2:-8398689 | None:intergenic |
CGAAACAATATCTTGTGAAG+TGG | 0.524651 | 1.2:-8397540 | MS.gene060894:CDS |
AGACATTGTGTGCTATTGAC+AGG | 0.525810 | 1.2:-8395447 | MS.gene060894:CDS |
CTTGCTGATGAAATGGGACT+TGG | 0.527291 | 1.2:-8396203 | MS.gene060894:intron |
TGTATACTTCGCAGGAGATG+TGG | 0.527402 | 1.2:+8394457 | None:intergenic |
ATACATACAACATTCATTTG+CGG | 0.527977 | 1.2:+8395943 | None:intergenic |
CAACAATATGAACATAGCCC+CGG | 0.529469 | 1.2:-8396416 | MS.gene060894:CDS |
GTATTGGACTTACACATTCA+GGG | 0.529829 | 1.2:+8397733 | None:intergenic |
GGGAGCGCGAATTTGAAAGA+TGG | 0.531612 | 1.2:-8395969 | MS.gene060894:CDS |
GTATACTTCGCAGGAGATGT+GGG | 0.532884 | 1.2:+8394458 | None:intergenic |
GCATATAAAGTGGGAGTGCA+TGG | 0.533080 | 1.2:-8395690 | MS.gene060894:intron |
GAAACATTACCATATTGTTG+CGG | 0.537022 | 1.2:+8393783 | None:intergenic |
GAGAAACATTCTCTTTGCAA+AGG | 0.538799 | 1.2:+8396031 | None:intergenic |
ATTTGGGACTAGGCCTGCAT+CGG | 0.539688 | 1.2:+8393883 | None:intergenic |
TCCACTTTCGCCGGCAACAG+TGG | 0.540259 | 1.2:+8397594 | None:intergenic |
AGTAGCTTGGTTGACAGGCT+TGG | 0.540263 | 1.2:-8398676 | MS.gene060894:CDS |
TGAAAGCAGCACGACCTGCA+TGG | 0.540604 | 1.2:+8393852 | None:intergenic |
AAGGATTCATGTCAAGCTTG+TGG | 0.544104 | 1.2:-8397858 | MS.gene060894:CDS |
AGAAACATTCTCTTTGCAAA+GGG | 0.545302 | 1.2:+8396032 | None:intergenic |
AAGTATAACATGAGTTTGCT+TGG | 0.551969 | 1.2:+8396223 | None:intergenic |
TATTTGAATGCAGTCTAAGA+TGG | 0.552123 | 1.2:-8393577 | MS.gene060894:CDS |
GATCTTCCTTAAAACCGGCC+TGG | 0.553784 | 1.2:+8393636 | None:intergenic |
TTTGTTTAATACAGGGACAA+TGG | 0.554370 | 1.2:-8396641 | MS.gene060894:intron |
GGAGCGCGAATTTGAAAGAT+GGG | 0.560761 | 1.2:-8395968 | MS.gene060894:CDS |
TACTAACCTTCCCAGCATCA+AGG | 0.561391 | 1.2:+8394660 | None:intergenic |
TTATGCACTTCCTTGATGCT+GGG | 0.561542 | 1.2:-8394670 | MS.gene060894:CDS |
AGTGGAGCAACCACCAGATG+TGG | 0.562409 | 1.2:+8396009 | None:intergenic |
CAATATCTTGTGAAGTGGAA+AGG | 0.567850 | 1.2:-8397535 | MS.gene060894:CDS |
GCACATCCAGTTGTCAAGAC+GGG | 0.570209 | 1.2:+8397755 | None:intergenic |
CATCATTGAAGCATATAAAG+TGG | 0.571016 | 1.2:-8395700 | MS.gene060894:CDS |
AGAAGGAATATCTTGTGAAG+TGG | 0.573172 | 1.2:-8396613 | MS.gene060894:CDS |
TCTTATCAACATCAATAAGT+GGG | 0.573695 | 1.2:+8397638 | None:intergenic |
GGCACATCCAGTTGTCAAGA+CGG | 0.576340 | 1.2:+8397754 | None:intergenic |
CATTCGACCTGAATGGACTA+CGG | 0.580178 | 1.2:-8397193 | MS.gene060894:CDS |
CGTAGTCCATTCAGGTCGAA+TGG | 0.580380 | 1.2:+8397194 | None:intergenic |
CCACTTTCGCCGGCAACAGT+GGG | 0.591104 | 1.2:+8397595 | None:intergenic |
GAATGTTTCTCCACATCTGG+TGG | 0.596370 | 1.2:-8396019 | MS.gene060894:CDS |
ATGCAGTCTAAGATGGTCGA+AGG | 0.596722 | 1.2:-8393570 | MS.gene060894:CDS |
GAAAACTTCGATTCATTCAG+GGG | 0.597502 | 1.2:+8393421 | None:intergenic |
ATCATTGAAGCATATAAAGT+GGG | 0.597898 | 1.2:-8395699 | MS.gene060894:CDS |
TACATGCAGATAGTTGATGA+AGG | 0.599170 | 1.2:-8395528 | MS.gene060894:intron |
CTTTATATGCTTCAATGATG+CGG | 0.599988 | 1.2:+8395703 | None:intergenic |
GCACTTATTCATTCCACACC+GGG | 0.601453 | 1.2:-8397803 | MS.gene060894:CDS |
AAAGCAGCACGACCTGCATG+GGG | 0.609367 | 1.2:+8393854 | None:intergenic |
ACTACATCCATATCAACTTG+AGG | 0.610933 | 1.2:-8396273 | MS.gene060894:CDS |
TGCACTTATTCATTCCACAC+CGG | 0.617206 | 1.2:-8397804 | MS.gene060894:CDS |
GCCAGAGGAAGAGTTTCTGA+AGG | 0.618618 | 1.2:-8397307 | MS.gene060894:CDS |
ACTTTCTACACTACAAAACT+GGG | 0.626881 | 1.2:-8395989 | MS.gene060894:CDS |
TTAAACCTGGCACCCGCGTG+AGG | 0.629790 | 1.2:-8393496 | MS.gene060894:CDS |
AGCCCCGGATTTCTTTCAGG+GGG | 0.630635 | 1.2:-8396401 | MS.gene060894:intron |
GAACTCGGGAAAAGTTTGAG+AGG | 0.631279 | 1.2:-8398573 | MS.gene060894:CDS |
TGCAGTCTAAGATGGTCGAA+GGG | 0.634108 | 1.2:-8393569 | MS.gene060894:CDS |
AAGTGGTGACAGTAAACACC+CGG | 0.636122 | 1.2:+8397785 | None:intergenic |
ATTCAGGGGTTACTATGACG+TGG | 0.646228 | 1.2:+8393435 | None:intergenic |
GCTTGGACCAAGAGAAACGT+AGG | 0.652671 | 1.2:+8396240 | None:intergenic |
ACAGTGAATAATATTAAACC+TGG | 0.655614 | 1.2:-8393509 | MS.gene060894:CDS |
TGTCAAGCTTGTGGAAAGAG+CGG | 0.655768 | 1.2:-8397849 | MS.gene060894:CDS |
TATCGTATATGCATTGCGGA+TGG | 0.656435 | 1.2:-8397510 | MS.gene060894:intron |
TATCTGACTCAAGCTCCCAA+TGG | 0.656670 | 1.2:+8396567 | None:intergenic |
GGACTATCGTATATGCATTG+CGG | 0.680748 | 1.2:-8397514 | MS.gene060894:CDS |
GTGACAGTAAACACCCGGTG+TGG | 0.682101 | 1.2:+8397790 | None:intergenic |
TATACTTCGCAGGAGATGTG+GGG | 0.683459 | 1.2:+8394459 | None:intergenic |
GATCAACTGACATCCTCACG+CGG | 0.691180 | 1.2:+8393483 | None:intergenic |
TAGCCCCGGATTTCTTTCAG+GGG | 0.691300 | 1.2:-8396402 | MS.gene060894:CDS |
TATTATAGTAGAAGATAACG+AGG | 0.701927 | 1.2:-8393606 | MS.gene060894:CDS |
ATCAACTGACATCCTCACGC+GGG | 0.709088 | 1.2:+8393484 | None:intergenic |
ATTATAGTAGAAGATAACGA+GGG | 0.735507 | 1.2:-8393605 | MS.gene060894:CDS |
AAGCAGCACGACCTGCATGG+GGG | 0.750415 | 1.2:+8393855 | None:intergenic |
AAAGTGGATCCGAAAATTTG+GGG | 0.760715 | 1.2:-8397579 | MS.gene060894:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATATTTATTTCAAAATT+AGG | + | chr1.2:8397112-8397131 | None:intergenic | 10.0% |
!! | AGGAAAAAAAAAAAAAAAAA+AGG | - | chr1.2:8398039-8398058 | MS.gene060894:intron | 10.0% |
!! | ATCAGTAAATAAATTGTAAA+TGG | - | chr1.2:8396844-8396863 | MS.gene060894:intron | 15.0% |
!! | ATTTACAATTTATTTACTGA+TGG | + | chr1.2:8396845-8396864 | None:intergenic | 15.0% |
!! | CAAATTAAGAATAATAGTAA+AGG | + | chr1.2:8395978-8395997 | None:intergenic | 15.0% |
!! | CTTTACTATTATTCTTAATT+TGG | - | chr1.2:8395976-8395995 | MS.gene060894:CDS | 15.0% |
!! | TCAGTAAATAAATTGTAAAT+GGG | - | chr1.2:8396845-8396864 | MS.gene060894:intron | 15.0% |
!! | TCATATATTTATGTAAATGA+AGG | - | chr1.2:8395813-8395832 | MS.gene060894:CDS | 15.0% |
!! | TTACATAAATATATGAAATC+AGG | + | chr1.2:8395809-8395828 | None:intergenic | 15.0% |
!!! | AATTCATTTTTAGAATTCTT+CGG | + | chr1.2:8396330-8396349 | None:intergenic | 15.0% |
!!! | TAATTAAGAAATGATACTTT+TGG | + | chr1.2:8398354-8398373 | None:intergenic | 15.0% |
!!! | TATTATTTTTCATATAAGCA+AGG | + | chr1.2:8394994-8395013 | None:intergenic | 15.0% |
!!! | TCATACTTTTTTCATAATAT+AGG | + | chr1.2:8397483-8397502 | None:intergenic | 15.0% |
!!! | TGAATTTATATTTTTTTGCA+TGG | - | chr1.2:8395373-8395392 | MS.gene060894:intron | 15.0% |
!!! | TTTTAACGGATATATTATTT+TGG | - | chr1.2:8395740-8395759 | MS.gene060894:CDS | 15.0% |
!! | AAAATAAATTGGTTGAGATT+TGG | + | chr1.2:8394713-8394732 | None:intergenic | 20.0% |
!! | AAAATATAAAATCCTTTCAG+AGG | + | chr1.2:8395321-8395340 | None:intergenic | 20.0% |
!! | AAACAAAATATTCCATAACT+TGG | + | chr1.2:8395458-8395477 | None:intergenic | 20.0% |
!! | AAATATAAAATCCTTTCAGA+GGG | + | chr1.2:8395320-8395339 | None:intergenic | 20.0% |
!! | AAATTTATAAAGCTGGTAAA+TGG | + | chr1.2:8394773-8394792 | None:intergenic | 20.0% |
!! | AACAAAATATTCCATAACTT+GGG | + | chr1.2:8395457-8395476 | None:intergenic | 20.0% |
!! | ATATTATGTGTGAAAGTTAT+TGG | - | chr1.2:8397958-8397977 | MS.gene060894:intron | 20.0% |
!! | CAAATGTGATTATTGAAAAT+GGG | + | chr1.2:8394139-8394158 | None:intergenic | 20.0% |
!! | CATATTATTCTCAATTAGAT+TGG | - | chr1.2:8397026-8397045 | MS.gene060894:intron | 20.0% |
!! | TAAAAAAAGTGGTAATACTA+AGG | + | chr1.2:8396971-8396990 | None:intergenic | 20.0% |
!! | TAATGTATGTTAATTTCTGT+AGG | - | chr1.2:8396236-8396255 | MS.gene060894:CDS | 20.0% |
!! | TATTTGAACAGATAAAAATG+AGG | + | chr1.2:8393962-8393981 | None:intergenic | 20.0% |
!! | TCAAATGTGATTATTGAAAA+TGG | + | chr1.2:8394140-8394159 | None:intergenic | 20.0% |
!! | TCTAATAAAACAAAGACAAA+AGG | + | chr1.2:8395776-8395795 | None:intergenic | 20.0% |
!!! | AATCTCAACCAATTTATTTT+CGG | - | chr1.2:8394713-8394732 | MS.gene060894:intron | 20.0% |
!!! | AATTAACGTATATCCTATTT+TGG | - | chr1.2:8398369-8398388 | MS.gene060894:intron | 20.0% |
!!! | AATTTTAAATAAACCTGAAG+AGG | + | chr1.2:8396695-8396714 | None:intergenic | 20.0% |
!!! | AGAAAACTTGTTAAAAGTAT+TGG | + | chr1.2:8394398-8394417 | None:intergenic | 20.0% |
!!! | ATTTTTTAGTGGCTTATAAA+TGG | - | chr1.2:8396876-8396895 | MS.gene060894:intron | 20.0% |
!!! | CTTTATAAATTTTCTCTTCA+GGG | - | chr1.2:8394781-8394800 | MS.gene060894:intron | 20.0% |
!!! | GAATTCTAAAAATGAATTTC+TGG | - | chr1.2:8396332-8396351 | MS.gene060894:intron | 20.0% |
!!! | GGAATATTTTGTTTAATACA+GGG | - | chr1.2:8395464-8395483 | MS.gene060894:CDS | 20.0% |
!!! | TATTTAAGATGATATATGGA+TGG | - | chr1.2:8396810-8396829 | MS.gene060894:intron | 20.0% |
!!! | TGGAATATTTTGTTTAATAC+AGG | - | chr1.2:8395463-8395482 | MS.gene060894:CDS | 20.0% |
!!! | TGTCTTTGTTTTATTAGATT+TGG | - | chr1.2:8395778-8395797 | MS.gene060894:CDS | 20.0% |
!!! | TTCGTATTTAAGATGATATA+TGG | - | chr1.2:8396806-8396825 | MS.gene060894:intron | 20.0% |
!!! | TTTTAACAAGTTTTCTTCTT+AGG | - | chr1.2:8394402-8394421 | MS.gene060894:intron | 20.0% |
! | AAAAGACTCCGAAAATAAAT+TGG | + | chr1.2:8394724-8394743 | None:intergenic | 25.0% |
! | AAAATTCCTGTTAACATTCT+CGG | + | chr1.2:8395084-8395103 | None:intergenic | 25.0% |
! | AAGGGCTTAATATACATAAT+GGG | - | chr1.2:8398561-8398580 | MS.gene060894:CDS | 25.0% |
! | AATATAAAATCCTTTCAGAG+GGG | + | chr1.2:8395319-8395338 | None:intergenic | 25.0% |
! | ACAGAATTTCTATAAGAACA+AGG | + | chr1.2:8397867-8397886 | None:intergenic | 25.0% |
! | ACAGTGAATAATATTAAACC+TGG | - | chr1.2:8398603-8398622 | MS.gene060894:CDS | 25.0% |
! | AGAAAACTAGATCAAAAACA+TGG | + | chr1.2:8395256-8395275 | None:intergenic | 25.0% |
! | AGGATAGAAACAAAATAACA+AGG | + | chr1.2:8394208-8394227 | None:intergenic | 25.0% |
! | ATACATACAACATTCATTTG+CGG | + | chr1.2:8396172-8396191 | None:intergenic | 25.0% |
! | ATCATTGAAGCATATAAAGT+GGG | - | chr1.2:8396413-8396432 | MS.gene060894:CDS | 25.0% |
! | ATCTTATCAACATCAATAAG+TGG | + | chr1.2:8394478-8394497 | None:intergenic | 25.0% |
! | ATGCCAAATTAAACAGTATA+AGG | + | chr1.2:8393809-8393828 | None:intergenic | 25.0% |
! | ATTATAGTAGAAGATAACGA+GGG | - | chr1.2:8398507-8398526 | MS.gene060894:intron | 25.0% |
! | CAAAAACATTTAACGTAACT+AGG | + | chr1.2:8395032-8395051 | None:intergenic | 25.0% |
! | CATGTAAAAGCTAAAAAAAG+TGG | + | chr1.2:8396982-8397001 | None:intergenic | 25.0% |
! | GAAGAGAAAATTTATAAAGC+TGG | + | chr1.2:8394780-8394799 | None:intergenic | 25.0% |
! | GACTACCTAATTATCTAAAT+CGG | + | chr1.2:8398125-8398144 | None:intergenic | 25.0% |
! | GATCCTTATACTGTTTAATT+TGG | - | chr1.2:8393803-8393822 | MS.gene060894:CDS | 25.0% |
! | GATTCAATATATTTCGTTCT+AGG | - | chr1.2:8395595-8395614 | MS.gene060894:intron | 25.0% |
! | GTAAATAAATTGTAAATGGG+TGG | - | chr1.2:8396848-8396867 | MS.gene060894:intron | 25.0% |
! | TAAGAAAGCAATACTTTGTA+TGG | + | chr1.2:8396056-8396075 | None:intergenic | 25.0% |
! | TAGTAAAGGACACAAATATT+AGG | + | chr1.2:8395964-8395983 | None:intergenic | 25.0% |
! | TATTATAGTAGAAGATAACG+AGG | - | chr1.2:8398506-8398525 | MS.gene060894:intron | 25.0% |
! | TCTTATCAACATCAATAAGT+GGG | + | chr1.2:8394477-8394496 | None:intergenic | 25.0% |
! | TGTAACTTTAGTATTCAAGA+AGG | - | chr1.2:8398147-8398166 | MS.gene060894:intron | 25.0% |
! | TTGATCTATTATGTTGAAAC+TGG | - | chr1.2:8397982-8398001 | MS.gene060894:intron | 25.0% |
! | TTTGTTTGGATTATAATGCA+TGG | + | chr1.2:8396921-8396940 | None:intergenic | 25.0% |
!! | AATATCTAGATGAAAGTACA+AGG | + | chr1.2:8398404-8398423 | None:intergenic | 25.0% |
!! | AATCCTTTTTCTATTGGAAA+AGG | + | chr1.2:8394241-8394260 | None:intergenic | 25.0% |
!! | ATATCTAGATGAAAGTACAA+GGG | + | chr1.2:8398403-8398422 | None:intergenic | 25.0% |
!! | GATGGTAAGTAAAATTTTAC+TGG | + | chr1.2:8396480-8396499 | None:intergenic | 25.0% |
!! | GCTTTATAAATTTTCTCTTC+AGG | - | chr1.2:8394780-8394799 | MS.gene060894:intron | 25.0% |
!! | TATCCTTTTCCAATAGAAAA+AGG | - | chr1.2:8394235-8394254 | MS.gene060894:intron | 25.0% |
!! | TTCCATCTTTTCTATGAAAA+TGG | - | chr1.2:8395422-8395441 | MS.gene060894:intron | 25.0% |
!! | TTGATACTGGATGAAATTTT+GGG | - | chr1.2:8397912-8397931 | MS.gene060894:intron | 25.0% |
!! | TTTGTGATTTACTTTGCTAT+CGG | - | chr1.2:8394073-8394092 | MS.gene060894:intron | 25.0% |
!!! | CGTTAAATGTTTTTGAACTT+CGG | - | chr1.2:8395037-8395056 | MS.gene060894:intron | 25.0% |
!!! | TAATATACATAATGGGTAGA+TGG | - | chr1.2:8398568-8398587 | MS.gene060894:CDS | 25.0% |
!!! | TATTGTTGATTTTTACATCC+TGG | - | chr1.2:8397330-8397349 | MS.gene060894:intron | 25.0% |
!!! | TTATACTGTTTAATTTGGCA+TGG | - | chr1.2:8393808-8393827 | MS.gene060894:CDS | 25.0% |
AAACAACTTTCATCGTCAAA+TGG | - | chr1.2:8394862-8394881 | MS.gene060894:intron | 30.0% | |
AAACATTACCATATTGTTGC+GGG | + | chr1.2:8398331-8398350 | None:intergenic | 30.0% | |
AATCAACAATATGCACTAGA+AGG | + | chr1.2:8397321-8397340 | None:intergenic | 30.0% | |
AATGGTTAAAGCAAAAAGGA+AGG | + | chr1.2:8393594-8393613 | None:intergenic | 30.0% | |
AATTGGTTGAGATTTGGAAA+TGG | + | chr1.2:8394707-8394726 | None:intergenic | 30.0% | |
ACAAAAATGATCCAAACTCT+CGG | + | chr1.2:8394039-8394058 | None:intergenic | 30.0% | |
ACAAAAGAGATGCAATTAGA+TGG | + | chr1.2:8396498-8396517 | None:intergenic | 30.0% | |
ACCAATGCTTACAAAGTTTA+GGG | + | chr1.2:8393655-8393674 | None:intergenic | 30.0% | |
ACCTTTCTGTGAAATAATAC+AGG | - | chr1.2:8393882-8393901 | MS.gene060894:CDS | 30.0% | |
ACGATGAAAGTTGTTTACTT+TGG | + | chr1.2:8394858-8394877 | None:intergenic | 30.0% | |
ACTTTCTACACTACAAAACT+GGG | - | chr1.2:8396123-8396142 | MS.gene060894:intron | 30.0% | |
AGAAACATTCTCTTTGCAAA+GGG | + | chr1.2:8396083-8396102 | None:intergenic | 30.0% | |
CACCACAAAAAACAAAACTT+TGG | + | chr1.2:8394001-8394020 | None:intergenic | 30.0% | |
CATCATTGAAGCATATAAAG+TGG | - | chr1.2:8396412-8396431 | MS.gene060894:CDS | 30.0% | |
CATGCACATCATTTCAAAAA+GGG | + | chr1.2:8398093-8398112 | None:intergenic | 30.0% | |
CCTTTCTGTGAAATAATACA+GGG | - | chr1.2:8393883-8393902 | MS.gene060894:CDS | 30.0% | |
CTCAATTAGATTGGATTCAA+AGG | - | chr1.2:8397035-8397054 | MS.gene060894:intron | 30.0% | |
CTTTATATGCTTCAATGATG+CGG | + | chr1.2:8396412-8396431 | None:intergenic | 30.0% | |
CTTTCTGTGAAATAATACAG+GGG | - | chr1.2:8393884-8393903 | MS.gene060894:CDS | 30.0% | |
GAAACATTACCATATTGTTG+CGG | + | chr1.2:8398332-8398351 | None:intergenic | 30.0% | |
GAAGGGCTTAATATACATAA+TGG | - | chr1.2:8398560-8398579 | MS.gene060894:CDS | 30.0% | |
GGAAACCAAACTATATTAGT+AGG | + | chr1.2:8398072-8398091 | None:intergenic | 30.0% | |
GTAATACTAAGGTTCGAAAA+TGG | + | chr1.2:8396960-8396979 | None:intergenic | 30.0% | |
GTATCATATGTACTTTCCAT+AGG | + | chr1.2:8397278-8397297 | None:intergenic | 30.0% | |
TAAAACAAAGACAAAAGGTG+TGG | + | chr1.2:8395771-8395790 | None:intergenic | 30.0% | |
TAAAATGAACCCAATGGAAA+TGG | + | chr1.2:8393612-8393631 | None:intergenic | 30.0% | |
TAAGATACGTTGGACATTTA+TGG | + | chr1.2:8397527-8397546 | None:intergenic | 30.0% | |
TACCAATGCTTACAAAGTTT+AGG | + | chr1.2:8393656-8393675 | None:intergenic | 30.0% | |
TACTGCCTACTAATATAGTT+TGG | - | chr1.2:8398064-8398083 | MS.gene060894:intron | 30.0% | |
TAGACTGAAAATTCCGATAT+TGG | + | chr1.2:8393738-8393757 | None:intergenic | 30.0% | |
TATGAACTTTCAATTGCTTC+TGG | - | chr1.2:8397545-8397564 | MS.gene060894:CDS | 30.0% | |
TATTTGAATGCAGTCTAAGA+TGG | - | chr1.2:8398535-8398554 | MS.gene060894:intron | 30.0% | |
TCATGCACATCATTTCAAAA+AGG | + | chr1.2:8398094-8398113 | None:intergenic | 30.0% | |
TGAAAGTTCATAAGATACGT+TGG | + | chr1.2:8397537-8397556 | None:intergenic | 30.0% | |
TGACTCATCAAAACATAAGA+AGG | + | chr1.2:8395279-8395298 | None:intergenic | 30.0% | |
TGGAAATGGTTAAAGCAAAA+AGG | + | chr1.2:8393598-8393617 | None:intergenic | 30.0% | |
TTAGAATTCTTCGGATTCTT+CGG | + | chr1.2:8396321-8396340 | None:intergenic | 30.0% | |
TTGCTTTAACCATTTCCATT+GGG | - | chr1.2:8393600-8393619 | MS.gene060894:CDS | 30.0% | |
TTGGAAAAGGATAGTAGAAA+AGG | + | chr1.2:8394228-8394247 | None:intergenic | 30.0% | |
TTGTTTCGTCAAACATTGTT+TGG | + | chr1.2:8394560-8394579 | None:intergenic | 30.0% | |
TTTCTGTAGGTTATGTATGT+TGG | - | chr1.2:8396249-8396268 | MS.gene060894:CDS | 30.0% | |
TTTGCTTTAACCATTTCCAT+TGG | - | chr1.2:8393599-8393618 | MS.gene060894:CDS | 30.0% | |
TTTGTTTAATACAGGGACAA+TGG | - | chr1.2:8395471-8395490 | MS.gene060894:CDS | 30.0% | |
! | AAGGTCTCAACTTTTCTAAA+AGG | - | chr1.2:8398019-8398038 | MS.gene060894:intron | 30.0% |
! | AAGTATAACATGAGTTTGCT+TGG | + | chr1.2:8395892-8395911 | None:intergenic | 30.0% |
! | ATAGCAACTTTTCTTAGCTA+AGG | - | chr1.2:8397231-8397250 | MS.gene060894:CDS | 30.0% |
! | GACATGAATCCTTTTTCTAT+TGG | + | chr1.2:8394247-8394266 | None:intergenic | 30.0% |
! | GAGAATGTTAACAGGAATTT+TGG | - | chr1.2:8395083-8395102 | MS.gene060894:intron | 30.0% |
! | GTTATACTTGCTGATGAAAT+GGG | - | chr1.2:8395903-8395922 | MS.gene060894:intron | 30.0% |
! | GTTGATACTGGATGAAATTT+TGG | - | chr1.2:8397911-8397930 | MS.gene060894:intron | 30.0% |
! | GTTGATGTCTTGACTTTTAA+AGG | - | chr1.2:8396739-8396758 | MS.gene060894:intron | 30.0% |
! | TAGTTACTTTCAGCTTCTAA+CGG | - | chr1.2:8394652-8394671 | MS.gene060894:intron | 30.0% |
! | TCTTAAGTAATGGTTGATAC+TGG | - | chr1.2:8397899-8397918 | MS.gene060894:intron | 30.0% |
! | TGTTATACTTGCTGATGAAA+TGG | - | chr1.2:8395902-8395921 | MS.gene060894:intron | 30.0% |
!! | CACTACCGATTTAGATAATT+AGG | - | chr1.2:8398117-8398136 | MS.gene060894:intron | 30.0% |
!! | GTCTTGACTTTTAAAGGAAT+TGG | - | chr1.2:8396745-8396764 | MS.gene060894:intron | 30.0% |
!! | TTGAGTTTTATGTTGGAAGT+TGG | - | chr1.2:8397361-8397380 | MS.gene060894:intron | 30.0% |
!!! | TGCCAAAGTTTTGTTTTTTG+TGG | - | chr1.2:8393996-8394015 | MS.gene060894:intron | 30.0% |
!!! | TTGAATCCTTGTTTTTCAGA+CGG | + | chr1.2:8396613-8396632 | None:intergenic | 30.0% |
AAAGTGGATCCGAAAATTTG+GGG | - | chr1.2:8394533-8394552 | MS.gene060894:CDS | 35.0% | |
AAGGGCTGAAATACCAAAAT+AGG | + | chr1.2:8398385-8398404 | None:intergenic | 35.0% | |
ACATCAACACACAATAAGTC+TGG | + | chr1.2:8396727-8396746 | None:intergenic | 35.0% | |
ACTACATCCATATCAACTTG+AGG | - | chr1.2:8395839-8395858 | MS.gene060894:CDS | 35.0% | |
ACTGGATAAAATGAACCCAA+TGG | + | chr1.2:8393618-8393637 | None:intergenic | 35.0% | |
AGAAGGAATATCTTGTGAAG+TGG | - | chr1.2:8395499-8395518 | MS.gene060894:CDS | 35.0% | |
AGAGTTCCAAGAAGAGTTTA+AGG | - | chr1.2:8397585-8397604 | MS.gene060894:CDS | 35.0% | |
AGTCTGATCTTCCTTAAAAC+CGG | + | chr1.2:8398484-8398503 | None:intergenic | 35.0% | |
ATTTGTCCGAGAATGTTAAC+AGG | - | chr1.2:8395075-8395094 | MS.gene060894:intron | 35.0% | |
CAAAAATGATCCAAACTCTC+GGG | + | chr1.2:8394038-8394057 | None:intergenic | 35.0% | |
CAATATCTTGTGAAGTGGAA+AGG | - | chr1.2:8394577-8394596 | MS.gene060894:intron | 35.0% | |
CACTTTCTACACTACAAAAC+TGG | - | chr1.2:8396122-8396141 | MS.gene060894:intron | 35.0% | |
CATCAAACATGTTGTCAAGT+AGG | + | chr1.2:8397389-8397408 | None:intergenic | 35.0% | |
CCCTGTATTATTTCACAGAA+AGG | + | chr1.2:8393886-8393905 | None:intergenic | 35.0% | |
CGAAACAATATCTTGTGAAG+TGG | - | chr1.2:8394572-8394591 | MS.gene060894:intron | 35.0% | |
CTACATCCATATCAACTTGA+GGG | - | chr1.2:8395840-8395859 | MS.gene060894:CDS | 35.0% | |
CTAGAAAAAGTCAGAGAACT+CGG | - | chr1.2:8393524-8393543 | MS.gene060894:CDS | 35.0% | |
CTAGATCAAAAACATGGTGA+TGG | + | chr1.2:8395250-8395269 | None:intergenic | 35.0% | |
CTATGACGTGGATGTAAATT+CGG | + | chr1.2:8398668-8398687 | None:intergenic | 35.0% | |
GAAAGTGGATCCGAAAATTT+GGG | - | chr1.2:8394532-8394551 | MS.gene060894:CDS | 35.0% | |
GAAGGTTATTGAAATGATGC+TGG | - | chr1.2:8398165-8398184 | MS.gene060894:intron | 35.0% | |
GAGAAACATTCTCTTTGCAA+AGG | + | chr1.2:8396084-8396103 | None:intergenic | 35.0% | |
GATAAAGATGTATACTTCGC+AGG | + | chr1.2:8397666-8397685 | None:intergenic | 35.0% | |
GATGAAAAACCAAGTCATCA+AGG | + | chr1.2:8396022-8396041 | None:intergenic | 35.0% | |
GCACTACACAAAACCAATAT+CGG | - | chr1.2:8393722-8393741 | MS.gene060894:intron | 35.0% | |
GTATTGGACTTACACATTCA+GGG | + | chr1.2:8394382-8394401 | None:intergenic | 35.0% | |
TACGAAGTAAATTTCCACCA+AGG | + | chr1.2:8393771-8393790 | None:intergenic | 35.0% | |
TACTAAGGTTCGAAAATGGA+TGG | + | chr1.2:8396956-8396975 | None:intergenic | 35.0% | |
TAGAAAAAGTCAGAGAACTC+GGG | - | chr1.2:8393525-8393544 | MS.gene060894:CDS | 35.0% | |
TATGACGTGGATGTAAATTC+GGG | + | chr1.2:8398667-8398686 | None:intergenic | 35.0% | |
TATTGCCAAAAACAAGTGCT+GGG | - | chr1.2:8395194-8395213 | MS.gene060894:intron | 35.0% | |
TCCCTAAACTTTGTAAGCAT+TGG | - | chr1.2:8393651-8393670 | MS.gene060894:CDS | 35.0% | |
TCCTTATGATGAATGCCATT+GGG | - | chr1.2:8395530-8395549 | MS.gene060894:intron | 35.0% | |
TCGTGATCACTCTTAAGTAA+TGG | - | chr1.2:8397889-8397908 | MS.gene060894:intron | 35.0% | |
TGATGCATTTCAGAACAATC+TGG | - | chr1.2:8397404-8397423 | MS.gene060894:intron | 35.0% | |
TGATGTCCTTAAACTCTTCT+TGG | + | chr1.2:8397594-8397613 | None:intergenic | 35.0% | |
TTATTGCCAAAAACAAGTGC+TGG | - | chr1.2:8395193-8395212 | MS.gene060894:intron | 35.0% | |
TTCAATTGCTTCTGGTAGTT+TGG | - | chr1.2:8397553-8397572 | MS.gene060894:CDS | 35.0% | |
TTCCTTATGATGAATGCCAT+TGG | - | chr1.2:8395529-8395548 | MS.gene060894:intron | 35.0% | |
TTGAGACCTTAGAAACTTCT+TGG | + | chr1.2:8398009-8398028 | None:intergenic | 35.0% | |
! | AGTATTGGACTTACACATTC+AGG | + | chr1.2:8394383-8394402 | None:intergenic | 35.0% |
! | GGATTAGGCACAATTTTGTT+TGG | + | chr1.2:8396935-8396954 | None:intergenic | 35.0% |
! | TCGGAATTTTCAGTCTAACT+CGG | - | chr1.2:8393741-8393760 | MS.gene060894:intron | 35.0% |
! | TTGTTTGGACCCCAAATTTT+CGG | + | chr1.2:8394545-8394564 | None:intergenic | 35.0% |
! | TTTTCTTAGCTAAGGTGCAT+TGG | - | chr1.2:8397239-8397258 | MS.gene060894:CDS | 35.0% |
!! | CAGGAATTTTGGTAGAAATG+TGG | - | chr1.2:8395094-8395113 | MS.gene060894:intron | 35.0% |
!! | CAGTTTTGTAGTGTAGAAAG+TGG | + | chr1.2:8396124-8396143 | None:intergenic | 35.0% |
!! | CGCCATTTTCATAGAAAAGA+TGG | + | chr1.2:8395427-8395446 | None:intergenic | 35.0% |
!! | GCATGTGTTGAGTTTTATGT+TGG | - | chr1.2:8397354-8397373 | MS.gene060894:intron | 35.0% |
!! | TACATGCAGATAGTTGATGA+AGG | - | chr1.2:8396584-8396603 | MS.gene060894:CDS | 35.0% |
!! | TGGCTAGATTGTTTTTCCTA+TGG | - | chr1.2:8397259-8397278 | MS.gene060894:CDS | 35.0% |
!! | TTCAATCCCTCAAGTTGATA+TGG | + | chr1.2:8395849-8395868 | None:intergenic | 35.0% |
!!! | GGGTGGATTTGATTTTTTAG+TGG | - | chr1.2:8396865-8396884 | MS.gene060894:intron | 35.0% |
!!! | TCAGGGGGTATGTTTTTTAA+CGG | - | chr1.2:8395726-8395745 | MS.gene060894:CDS | 35.0% |
!!! | TGACTTGGTTTTTCATCTTC+AGG | - | chr1.2:8396025-8396044 | MS.gene060894:CDS | 35.0% |
AAGGATTCATGTCAAGCTTG+TGG | - | chr1.2:8394254-8394273 | MS.gene060894:intron | 40.0% | |
AATGGCACAAGTCAGAAAAC+TGG | - | chr1.2:8394880-8394899 | MS.gene060894:intron | 40.0% | |
ACTGGTCCAAGAAGTTTCTA+AGG | - | chr1.2:8398000-8398019 | MS.gene060894:intron | 40.0% | |
AGAGAATGTTTCTCCACATC+TGG | - | chr1.2:8396090-8396109 | MS.gene060894:intron | 40.0% | |
CAACAATATGAACATAGCCC+CGG | - | chr1.2:8395696-8395715 | MS.gene060894:CDS | 40.0% | |
CAGATAAAAATGAGGCTGCA+AGG | + | chr1.2:8393954-8393973 | None:intergenic | 40.0% | |
CATGTGAGGAGAATAGAAGA+AGG | + | chr1.2:8397782-8397801 | None:intergenic | 40.0% | |
CGAAAGTGGATCCGAAAATT+TGG | - | chr1.2:8394531-8394550 | MS.gene060894:CDS | 40.0% | |
GACTCACTAATCATTGACCT+AGG | - | chr1.2:8395153-8395172 | MS.gene060894:intron | 40.0% | |
GGACTATCGTATATGCATTG+CGG | - | chr1.2:8394598-8394617 | MS.gene060894:intron | 40.0% | |
GGCGTAAAATTCCCAAGTTA+TGG | - | chr1.2:8395443-8395462 | MS.gene060894:CDS | 40.0% | |
TAAAACTCAACACATGCACC+AGG | + | chr1.2:8397351-8397370 | None:intergenic | 40.0% | |
TAAAATCCTTTCAGAGGGGA+AGG | + | chr1.2:8395315-8395334 | None:intergenic | 40.0% | |
TAAGAAACCTCGATCATGTG+AGG | + | chr1.2:8397796-8397815 | None:intergenic | 40.0% | |
TATCGTATATGCATTGCGGA+TGG | - | chr1.2:8394602-8394621 | MS.gene060894:intron | 40.0% | |
TCCCAATGGCATTCATCATA+AGG | + | chr1.2:8395534-8395553 | None:intergenic | 40.0% | |
TGAACTTCCTACGTTTCTCT+TGG | - | chr1.2:8395865-8395884 | MS.gene060894:intron | 40.0% | |
TGCACTTATTCATTCCACAC+CGG | - | chr1.2:8394308-8394327 | MS.gene060894:intron | 40.0% | |
TTATGCACTTCCTTGATGCT+GGG | - | chr1.2:8397442-8397461 | MS.gene060894:intron | 40.0% | |
TTCATCGAATACTTGCTTGC+AGG | - | chr1.2:8394942-8394961 | MS.gene060894:intron | 40.0% | |
TTCGAGGCTTCATACATTGT+TGG | - | chr1.2:8397630-8397649 | MS.gene060894:CDS | 40.0% | |
! | AGACATTGTGTGCTATTGAC+AGG | - | chr1.2:8396665-8396684 | MS.gene060894:intron | 40.0% |
! | ATTGCCAAAAACAAGTGCTG+GGG | - | chr1.2:8395195-8395214 | MS.gene060894:intron | 40.0% |
! | GGTTCGAAAATGGATGGATT+AGG | + | chr1.2:8396950-8396969 | None:intergenic | 40.0% |
! | GTGATTTACTTTGCTATCGG+AGG | - | chr1.2:8394076-8394095 | MS.gene060894:intron | 40.0% |
! | TGAGAACAGAAGAAGCACAA+AGG | + | chr1.2:8397824-8397843 | None:intergenic | 40.0% |
!! | CGAGTTCTCTGACTTTTTCT+AGG | + | chr1.2:8393526-8393545 | None:intergenic | 40.0% |
!! | GGTGATGGAATGTGAAACAA+TGG | + | chr1.2:8395235-8395254 | None:intergenic | 40.0% |
!! | TCCAAAAGAGTTTGTTAGCC+AGG | - | chr1.2:8398458-8398477 | MS.gene060894:intron | 40.0% |
!!! | TTTTTTATCACTGCAGCCTG+CGG | - | chr1.2:8394740-8394759 | MS.gene060894:intron | 40.0% |
AAGTGGTGACAGTAAACACC+CGG | + | chr1.2:8394330-8394349 | None:intergenic | 45.0% | |
AGGGAAAGTGAGTACAACAC+TGG | + | chr1.2:8393636-8393655 | None:intergenic | 45.0% | |
AGGTCACCGTCTGAAAAACA+AGG | - | chr1.2:8396604-8396623 | MS.gene060894:CDS | 45.0% | |
ATACCCCCTGAAAGAAATCC+GGG | + | chr1.2:8395717-8395736 | None:intergenic | 45.0% | |
ATAGCCCCGGATTTCTTTCA+GGG | - | chr1.2:8395709-8395728 | MS.gene060894:CDS | 45.0% | |
ATCAAGAGCAACAGGTTTCG+AGG | - | chr1.2:8397614-8397633 | MS.gene060894:CDS | 45.0% | |
ATTCAGGGGTTACTATGACG+TGG | + | chr1.2:8398680-8398699 | None:intergenic | 45.0% | |
ATTGACAGGAACTCCTCTTC+AGG | - | chr1.2:8396679-8396698 | MS.gene060894:intron | 45.0% | |
ATTGACCTAGGAAGCAAGCT+TGG | - | chr1.2:8395165-8395184 | MS.gene060894:intron | 45.0% | |
CAAAGCAACCCGCAACAATA+TGG | - | chr1.2:8398320-8398339 | MS.gene060894:intron | 45.0% | |
CATACCCCCTGAAAGAAATC+CGG | + | chr1.2:8395718-8395737 | None:intergenic | 45.0% | |
CTACTCACCATTCTAGTGCT+AGG | - | chr1.2:8396452-8396471 | MS.gene060894:CDS | 45.0% | |
CTATTCTCCTCACATGATCG+AGG | - | chr1.2:8397786-8397805 | MS.gene060894:CDS | 45.0% | |
CTCTAATAGTGCTACGAGCT+TGG | + | chr1.2:8396281-8396300 | None:intergenic | 45.0% | |
CTGAAATTGTCCCGAGAGTT+TGG | - | chr1.2:8394025-8394044 | MS.gene060894:intron | 45.0% | |
CTTATGCACTTCCTTGATGC+TGG | - | chr1.2:8397441-8397460 | MS.gene060894:intron | 45.0% | |
CTTGCTGATGAAATGGGACT+TGG | - | chr1.2:8395909-8395928 | MS.gene060894:intron | 45.0% | |
GAACTCGGGAAAAGTTTGAG+AGG | - | chr1.2:8393539-8393558 | MS.gene060894:CDS | 45.0% | |
GAATACTTGCTTGCAGGTTC+AGG | - | chr1.2:8394948-8394967 | MS.gene060894:intron | 45.0% | |
GAATGTTTCTCCACATCTGG+TGG | - | chr1.2:8396093-8396112 | MS.gene060894:intron | 45.0% | |
GCACTTATTCATTCCACACC+GGG | - | chr1.2:8394309-8394328 | MS.gene060894:intron | 45.0% | |
GGACATCAATCAAGAGCAAC+AGG | - | chr1.2:8397606-8397625 | MS.gene060894:CDS | 45.0% | |
GGAGCGCGAATTTGAAAGAT+GGG | - | chr1.2:8396144-8396163 | MS.gene060894:intron | 45.0% | |
GTATACTTCGCAGGAGATGT+GGG | + | chr1.2:8397657-8397676 | None:intergenic | 45.0% | |
TAAATTCGGGAACGATCAGC+AGG | + | chr1.2:8398654-8398673 | None:intergenic | 45.0% | |
TACTAACCTTCCCAGCATCA+AGG | + | chr1.2:8397455-8397474 | None:intergenic | 45.0% | |
TATACTTCGCAGGAGATGTG+GGG | + | chr1.2:8397656-8397675 | None:intergenic | 45.0% | |
TATCTGACTCAAGCTCCCAA+TGG | + | chr1.2:8395548-8395567 | None:intergenic | 45.0% | |
TGTATACTTCGCAGGAGATG+TGG | + | chr1.2:8397658-8397677 | None:intergenic | 45.0% | |
TGTCAAGCTTGTGGAAAGAG+CGG | - | chr1.2:8394263-8394282 | MS.gene060894:intron | 45.0% | |
TTCTCTTTGTGTGACTGTGC+AGG | - | chr1.2:8394447-8394466 | MS.gene060894:intron | 45.0% | |
TTGACCTAGGAAGCAAGCTT+GGG | - | chr1.2:8395166-8395185 | MS.gene060894:intron | 45.0% | |
! | AAAACCCAAGCTTGCTTCCT+AGG | + | chr1.2:8395173-8395192 | None:intergenic | 45.0% |
! | ACTTTGCTATCGGAGGAGTA+TGG | - | chr1.2:8394083-8394102 | MS.gene060894:intron | 45.0% |
! | AGCACATGATCTGTTGGTTG+AGG | - | chr1.2:8397733-8397752 | MS.gene060894:intron | 45.0% |
! | ATGCAGTCTAAGATGGTCGA+AGG | - | chr1.2:8398542-8398561 | MS.gene060894:intron | 45.0% |
! | ATTTTCGGATCCACTTTCGC+CGG | + | chr1.2:8394530-8394549 | None:intergenic | 45.0% |
! | GCATATAAAGTGGGAGTGCA+TGG | - | chr1.2:8396422-8396441 | MS.gene060894:CDS | 45.0% |
! | GCCTGGCTAACAAACTCTTT+TGG | + | chr1.2:8398462-8398481 | None:intergenic | 45.0% |
! | TCAAGACGGGAGCTTTTAAG+TGG | + | chr1.2:8394347-8394366 | None:intergenic | 45.0% |
! | TGCAGTCTAAGATGGTCGAA+GGG | - | chr1.2:8398543-8398562 | MS.gene060894:intron | 45.0% |
! | TTTTTATCACTGCAGCCTGC+GGG | - | chr1.2:8394741-8394760 | MS.gene060894:intron | 45.0% |
!! | AAAAACAAGTGCTGGGGATG+GGG | - | chr1.2:8395201-8395220 | MS.gene060894:intron | 45.0% |
!! | AAAGAGTTTGTTAGCCAGGC+CGG | - | chr1.2:8398462-8398481 | MS.gene060894:intron | 45.0% |
!! | CAAAAACAAGTGCTGGGGAT+GGG | - | chr1.2:8395200-8395219 | MS.gene060894:intron | 45.0% |
!! | CATTCGACCTGAATGGACTA+CGG | - | chr1.2:8394919-8394938 | MS.gene060894:intron | 45.0% |
AAAGCTCCCGTCTTGACAAC+TGG | - | chr1.2:8394351-8394370 | MS.gene060894:intron | 50.0% | |
AGTAGCTTGGTTGACAGGCT+TGG | - | chr1.2:8393436-8393455 | MS.gene060894:CDS | 50.0% | |
ATCAACTGACATCCTCACGC+GGG | + | chr1.2:8398631-8398650 | None:intergenic | 50.0% | |
CATAGCCCCGGATTTCTTTC+AGG | - | chr1.2:8395708-8395727 | MS.gene060894:CDS | 50.0% | |
CGATGAACCGTAGTCCATTC+AGG | + | chr1.2:8394929-8394948 | None:intergenic | 50.0% | |
CGTAGTCCATTCAGGTCGAA+TGG | + | chr1.2:8394921-8394940 | None:intergenic | 50.0% | |
GATCAACTGACATCCTCACG+CGG | + | chr1.2:8398632-8398651 | None:intergenic | 50.0% | |
GATCTTCCTTAAAACCGGCC+TGG | + | chr1.2:8398479-8398498 | None:intergenic | 50.0% | |
GCACATCCAGTTGTCAAGAC+GGG | + | chr1.2:8394360-8394379 | None:intergenic | 50.0% | |
GCCAGAGGAAGAGTTTCTGA+AGG | - | chr1.2:8394805-8394824 | MS.gene060894:intron | 50.0% | |
GCCTTCAGAAACTCTTCCTC+TGG | + | chr1.2:8394809-8394828 | None:intergenic | 50.0% | |
GCTTCAATGATGCGGCATCT+TGG | + | chr1.2:8396404-8396423 | None:intergenic | 50.0% | |
GCTTGGACCAAGAGAAACGT+AGG | + | chr1.2:8395875-8395894 | None:intergenic | 50.0% | |
GGCACATCCAGTTGTCAAGA+CGG | + | chr1.2:8394361-8394380 | None:intergenic | 50.0% | |
GGTAAATGGACAATACCCGC+AGG | + | chr1.2:8394759-8394778 | None:intergenic | 50.0% | |
TACCCCCTGAAAGAAATCCG+GGG | + | chr1.2:8395716-8395735 | None:intergenic | 50.0% | |
TAGCCCCGGATTTCTTTCAG+GGG | - | chr1.2:8395710-8395729 | MS.gene060894:CDS | 50.0% | |
TAGTCTCCTTCCCCTCTGAA+AGG | - | chr1.2:8395306-8395325 | MS.gene060894:intron | 50.0% | |
TCGTTGCCATTCGACCTGAA+TGG | - | chr1.2:8394912-8394931 | MS.gene060894:intron | 50.0% | |
! | ACTGGCTCCTAGCACTAGAA+TGG | + | chr1.2:8396462-8396481 | None:intergenic | 50.0% |
! | ATTTGGGACTAGGCCTGCAT+CGG | + | chr1.2:8398232-8398251 | None:intergenic | 50.0% |
! | GAAGCGTCACCTTGATGACT+TGG | - | chr1.2:8396010-8396029 | MS.gene060894:CDS | 50.0% |
! | GGGAGCGCGAATTTGAAAGA+TGG | - | chr1.2:8396143-8396162 | MS.gene060894:intron | 50.0% |
!! | AAAACAAGTGCTGGGGATGG+GGG | - | chr1.2:8395202-8395221 | MS.gene060894:intron | 50.0% |
!! | CCAAAAACAAGTGCTGGGGA+TGG | - | chr1.2:8395199-8395218 | MS.gene060894:intron | 50.0% |
!! | CCATCCCCAGCACTTGTTTT+TGG | + | chr1.2:8395202-8395221 | None:intergenic | 50.0% |
!! | TGTTAGCCAGGCCGGTTTTA+AGG | - | chr1.2:8398470-8398489 | MS.gene060894:intron | 50.0% |
!! | TTTTCTCTTCAGGGTGCCAG+AGG | - | chr1.2:8394790-8394809 | MS.gene060894:intron | 50.0% |
AAAGCAGCACGACCTGCATG+GGG | + | chr1.2:8398261-8398280 | None:intergenic | 55.0% | |
AAGATGCGTCCCACTGTTGC+CGG | - | chr1.2:8394508-8394527 | MS.gene060894:CDS | 55.0% | |
AGCCCCGGATTTCTTTCAGG+GGG | - | chr1.2:8395711-8395730 | MS.gene060894:CDS | 55.0% | |
AGTGGAGCAACCACCAGATG+TGG | + | chr1.2:8396106-8396125 | None:intergenic | 55.0% | |
CAGTCTAACTCGGCATGCCT+TGG | - | chr1.2:8393751-8393770 | MS.gene060894:intron | 55.0% | |
GAAAGCAGCACGACCTGCAT+GGG | + | chr1.2:8398262-8398281 | None:intergenic | 55.0% | |
GCACTTCCTTGATGCTGGGA+AGG | - | chr1.2:8397446-8397465 | MS.gene060894:intron | 55.0% | |
GTGACAGTAAACACCCGGTG+TGG | + | chr1.2:8394325-8394344 | None:intergenic | 55.0% | |
TCTAACTCGGCATGCCTTGG+TGG | - | chr1.2:8393754-8393773 | MS.gene060894:intron | 55.0% | |
TCTAATACCCCTGCCGATGC+AGG | - | chr1.2:8398216-8398235 | MS.gene060894:intron | 55.0% | |
TGAAAGCAGCACGACCTGCA+TGG | + | chr1.2:8398263-8398282 | None:intergenic | 55.0% | |
TGAAATGATGCTGGCCACGC+AGG | - | chr1.2:8398174-8398193 | MS.gene060894:intron | 55.0% | |
! | CAGGGACAATGGTGCTGAGA+AGG | - | chr1.2:8395482-8395501 | MS.gene060894:CDS | 55.0% |
!! | AAACAAGTGCTGGGGATGGG+GGG | - | chr1.2:8395203-8395222 | MS.gene060894:intron | 55.0% |
AAGCAGCACGACCTGCATGG+GGG | + | chr1.2:8398260-8398279 | None:intergenic | 60.0% | |
CCACTTTCGCCGGCAACAGT+GGG | + | chr1.2:8394520-8394539 | None:intergenic | 60.0% | |
TCCACTTTCGCCGGCAACAG+TGG | + | chr1.2:8394521-8394540 | None:intergenic | 60.0% | |
TTAAACCTGGCACCCGCGTG+AGG | - | chr1.2:8398616-8398635 | MS.gene060894:CDS | 60.0% | |
!! | CTGCATGGGGGAGGGCATTT+GGG | + | chr1.2:8398248-8398267 | None:intergenic | 60.0% |
AGCACGACCTGCATGGGGGA+GGG | + | chr1.2:8398256-8398275 | None:intergenic | 65.0% | |
CACCTGCAGCACAACCTGCG+TGG | + | chr1.2:8398191-8398210 | None:intergenic | 65.0% | |
CCAAATGCCCTCCCCCATGC+AGG | - | chr1.2:8398246-8398265 | MS.gene060894:intron | 65.0% | |
CCCACTGTTGCCGGCGAAAG+TGG | - | chr1.2:8394517-8394536 | MS.gene060894:CDS | 65.0% | |
! | GACTAGGCCTGCATCGGCAG+GGG | + | chr1.2:8398226-8398245 | None:intergenic | 65.0% |
! | GGACTAGGCCTGCATCGGCA+GGG | + | chr1.2:8398227-8398246 | None:intergenic | 65.0% |
!! | CCTGCATGGGGGAGGGCATT+TGG | + | chr1.2:8398249-8398268 | None:intergenic | 65.0% |
!! | GGGGGAGGGCATTTGGGACT+AGG | + | chr1.2:8398242-8398261 | None:intergenic | 65.0% |
CAGCACGACCTGCATGGGGG+AGG | + | chr1.2:8398257-8398276 | None:intergenic | 70.0% | |
GACATCCTCACGCGGGTGCC+AGG | + | chr1.2:8398624-8398643 | None:intergenic | 70.0% | |
GGCCACGCAGGTTGTGCTGC+AGG | - | chr1.2:8398186-8398205 | MS.gene060894:intron | 70.0% | |
! | GGGACTAGGCCTGCATCGGC+AGG | + | chr1.2:8398228-8398247 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 8393433 | 8398701 | 8393433 | ID=MS.gene060894 |
chr1.2 | mRNA | 8393433 | 8398701 | 8393433 | ID=MS.gene060894.t1;Parent=MS.gene060894 |
chr1.2 | exon | 8398555 | 8398701 | 8398555 | ID=MS.gene060894.t1.exon1;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8398555 | 8398701 | 8398555 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8397746 | 8397883 | 8397746 | ID=MS.gene060894.t1.exon2;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8397746 | 8397883 | 8397746 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8397511 | 8397665 | 8397511 | ID=MS.gene060894.t1.exon3;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8397511 | 8397665 | 8397511 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8397171 | 8397332 | 8397171 | ID=MS.gene060894.t1.exon4;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8397171 | 8397332 | 8397171 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8396402 | 8396649 | 8396402 | ID=MS.gene060894.t1.exon5;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8396402 | 8396649 | 8396402 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8396204 | 8396299 | 8396204 | ID=MS.gene060894.t1.exon6;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8396204 | 8396299 | 8396204 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8395951 | 8396087 | 8395951 | ID=MS.gene060894.t1.exon7;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8395951 | 8396087 | 8395951 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8395691 | 8395876 | 8395691 | ID=MS.gene060894.t1.exon8;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8395691 | 8395876 | 8395691 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8395434 | 8395541 | 8395434 | ID=MS.gene060894.t1.exon9;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8395434 | 8395541 | 8395434 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8394667 | 8394717 | 8394667 | ID=MS.gene060894.t1.exon10;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8394667 | 8394717 | 8394667 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8394464 | 8394563 | 8394464 | ID=MS.gene060894.t1.exon11;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8394464 | 8394563 | 8394464 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8393793 | 8393938 | 8393793 | ID=MS.gene060894.t1.exon12;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8393793 | 8393938 | 8393793 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
chr1.2 | exon | 8393433 | 8393681 | 8393433 | ID=MS.gene060894.t1.exon13;Parent=MS.gene060894.t1 |
chr1.2 | CDS | 8393433 | 8393681 | 8393433 | ID=cds.MS.gene060894.t1;Parent=MS.gene060894.t1 |
Gene Sequence |
Protein sequence |