Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061258.t1 | XP_003609797.2 | 90 | 399 | 34 | 3 | 1 | 399 | 5 | 397 | 1.30E-141 | 513.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061258.t1 | O22900 | 55.7 | 122 | 48 | 1 | 196 | 317 | 160 | 275 | 3.8e-30 | 134.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061258.t1 | G7JNY7 | 90.0 | 399 | 34 | 3 | 1 | 399 | 5 | 397 | 9.1e-142 | 513.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene061258.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061258.t1 | MTR_4g122530 | 89.500 | 400 | 34 | 4 | 1 | 399 | 5 | 397 | 0.0 | 578 |
MS.gene061258.t1 | MTR_2g033820 | 46.575 | 292 | 120 | 10 | 8 | 293 | 26 | 287 | 5.34e-46 | 163 |
MS.gene061258.t1 | MTR_1g086790 | 44.223 | 251 | 90 | 10 | 38 | 285 | 31 | 234 | 7.79e-42 | 150 |
MS.gene061258.t1 | MTR_7g109800 | 46.471 | 170 | 55 | 4 | 109 | 275 | 74 | 210 | 3.75e-38 | 140 |
MS.gene061258.t1 | MTR_5g043880 | 58.491 | 106 | 41 | 1 | 184 | 289 | 98 | 200 | 8.45e-35 | 130 |
MS.gene061258.t1 | MTR_5g091390 | 67.949 | 78 | 25 | 0 | 197 | 274 | 144 | 221 | 1.76e-32 | 125 |
MS.gene061258.t1 | MTR_4g094588 | 65.385 | 78 | 27 | 0 | 197 | 274 | 165 | 242 | 1.66e-30 | 120 |
MS.gene061258.t1 | MTR_8g007270 | 61.446 | 83 | 32 | 0 | 184 | 266 | 128 | 210 | 1.78e-29 | 114 |
MS.gene061258.t1 | MTR_3g104750 | 62.821 | 78 | 29 | 0 | 191 | 268 | 85 | 162 | 3.34e-29 | 112 |
MS.gene061258.t1 | MTR_1g015140 | 64.474 | 76 | 27 | 0 | 191 | 266 | 83 | 158 | 2.33e-28 | 109 |
MS.gene061258.t1 | MTR_3g095040 | 62.162 | 74 | 28 | 0 | 197 | 270 | 105 | 178 | 6.22e-28 | 110 |
MS.gene061258.t1 | MTR_3g095080 | 63.514 | 74 | 27 | 0 | 193 | 266 | 127 | 200 | 1.67e-27 | 109 |
MS.gene061258.t1 | MTR_3g095080 | 63.514 | 74 | 27 | 0 | 193 | 266 | 151 | 224 | 2.24e-27 | 109 |
MS.gene061258.t1 | MTR_3g031220 | 40.441 | 136 | 64 | 1 | 144 | 279 | 316 | 434 | 2.26e-26 | 111 |
MS.gene061258.t1 | MTR_3g031220 | 54.098 | 61 | 27 | 1 | 210 | 270 | 198 | 257 | 4.25e-14 | 74.3 |
MS.gene061258.t1 | MTR_7g079010 | 45.038 | 131 | 42 | 4 | 149 | 271 | 102 | 210 | 2.95e-26 | 105 |
MS.gene061258.t1 | MTR_7g028415 | 64.179 | 67 | 24 | 0 | 200 | 266 | 83 | 149 | 3.98e-26 | 103 |
MS.gene061258.t1 | MTR_7g028710 | 64.179 | 67 | 24 | 0 | 200 | 266 | 83 | 149 | 3.98e-26 | 103 |
MS.gene061258.t1 | MTR_8g092140 | 62.667 | 75 | 27 | 1 | 193 | 266 | 142 | 216 | 4.81e-26 | 105 |
MS.gene061258.t1 | MTR_8g092010 | 34.483 | 174 | 108 | 3 | 112 | 280 | 6 | 178 | 2.12e-25 | 102 |
MS.gene061258.t1 | MTR_3g056100 | 36.905 | 168 | 96 | 3 | 145 | 302 | 341 | 508 | 2.77e-25 | 108 |
MS.gene061258.t1 | MTR_3g056100 | 53.521 | 71 | 32 | 1 | 210 | 280 | 243 | 312 | 1.15e-14 | 76.3 |
MS.gene061258.t1 | MTR_3g056100 | 38.776 | 147 | 81 | 2 | 165 | 302 | 205 | 351 | 3.21e-25 | 107 |
MS.gene061258.t1 | MTR_3g056100 | 53.521 | 71 | 32 | 1 | 210 | 280 | 99 | 168 | 1.08e-14 | 75.9 |
MS.gene061258.t1 | MTR_3g056100 | 38.776 | 147 | 81 | 2 | 165 | 302 | 218 | 364 | 3.51e-25 | 107 |
MS.gene061258.t1 | MTR_3g056100 | 53.521 | 71 | 32 | 1 | 210 | 280 | 99 | 168 | 1.03e-14 | 76.3 |
MS.gene061258.t1 | MTR_4g082580 | 43.333 | 120 | 61 | 2 | 150 | 269 | 225 | 337 | 3.77e-25 | 106 |
MS.gene061258.t1 | MTR_4g082580 | 53.333 | 60 | 28 | 0 | 210 | 269 | 145 | 204 | 4.45e-16 | 79.7 |
MS.gene061258.t1 | MTR_3g056100 | 38.776 | 147 | 81 | 2 | 165 | 302 | 349 | 495 | 4.08e-25 | 108 |
MS.gene061258.t1 | MTR_3g056100 | 53.521 | 71 | 32 | 1 | 210 | 280 | 243 | 312 | 1.14e-14 | 76.3 |
MS.gene061258.t1 | MTR_8g096730 | 50.000 | 90 | 39 | 1 | 183 | 266 | 37 | 126 | 5.55e-25 | 100 |
MS.gene061258.t1 | MTR_5g074400 | 35.849 | 159 | 85 | 1 | 112 | 270 | 339 | 480 | 6.29e-25 | 107 |
MS.gene061258.t1 | MTR_5g074400 | 51.667 | 60 | 28 | 1 | 210 | 269 | 243 | 301 | 6.41e-13 | 70.9 |
MS.gene061258.t1 | MTR_7g080000 | 43.077 | 130 | 61 | 3 | 154 | 270 | 363 | 492 | 2.17e-24 | 106 |
MS.gene061258.t1 | MTR_7g080000 | 52.459 | 61 | 28 | 1 | 209 | 269 | 233 | 292 | 4.15e-14 | 74.7 |
MS.gene061258.t1 | MTR_5g094430 | 42.742 | 124 | 59 | 2 | 153 | 270 | 307 | 424 | 3.44e-24 | 105 |
MS.gene061258.t1 | MTR_5g094430 | 58.333 | 60 | 24 | 1 | 210 | 269 | 200 | 258 | 1.47e-14 | 75.9 |
MS.gene061258.t1 | MTR_5g094430 | 42.742 | 124 | 59 | 2 | 153 | 270 | 173 | 290 | 3.64e-24 | 103 |
MS.gene061258.t1 | MTR_5g094430 | 58.333 | 60 | 24 | 1 | 210 | 269 | 66 | 124 | 1.17e-14 | 75.9 |
MS.gene061258.t1 | MTR_5g094430 | 42.742 | 124 | 59 | 2 | 153 | 270 | 195 | 312 | 4.25e-24 | 103 |
MS.gene061258.t1 | MTR_5g094430 | 58.333 | 60 | 24 | 1 | 210 | 269 | 88 | 146 | 1.16e-14 | 75.9 |
MS.gene061258.t1 | MTR_3g009470 | 55.000 | 80 | 36 | 0 | 191 | 270 | 476 | 555 | 6.89e-24 | 104 |
MS.gene061258.t1 | MTR_3g009470 | 49.275 | 69 | 34 | 1 | 210 | 278 | 280 | 347 | 6.82e-15 | 77.4 |
MS.gene061258.t1 | MTR_7g080020 | 37.333 | 150 | 81 | 3 | 134 | 270 | 404 | 553 | 7.33e-24 | 104 |
MS.gene061258.t1 | MTR_7g080020 | 42.424 | 99 | 52 | 3 | 210 | 308 | 280 | 373 | 1.06e-15 | 79.7 |
MS.gene061258.t1 | MTR_7g011820 | 55.405 | 74 | 33 | 0 | 197 | 270 | 397 | 470 | 7.50e-24 | 103 |
MS.gene061258.t1 | MTR_7g011820 | 58.333 | 60 | 24 | 1 | 210 | 269 | 228 | 286 | 8.03e-16 | 79.7 |
MS.gene061258.t1 | MTR_5g042920 | 47.674 | 86 | 45 | 0 | 185 | 270 | 295 | 380 | 1.15e-23 | 102 |
MS.gene061258.t1 | MTR_5g042920 | 60.000 | 60 | 23 | 1 | 210 | 269 | 151 | 209 | 1.15e-16 | 82.0 |
MS.gene061258.t1 | MTR_4g013260 | 36.552 | 145 | 85 | 2 | 126 | 270 | 259 | 396 | 6.34e-23 | 101 |
MS.gene061258.t1 | MTR_4g013260 | 50.000 | 68 | 33 | 1 | 210 | 276 | 184 | 251 | 2.47e-14 | 75.1 |
MS.gene061258.t1 | MTR_7g071120 | 47.191 | 89 | 47 | 0 | 191 | 279 | 305 | 393 | 1.13e-22 | 100 |
MS.gene061258.t1 | MTR_7g071120 | 49.254 | 67 | 33 | 1 | 210 | 276 | 166 | 231 | 3.65e-13 | 71.6 |
MS.gene061258.t1 | MTR_7g100510 | 40.650 | 123 | 64 | 1 | 148 | 270 | 308 | 421 | 4.90e-22 | 98.2 |
MS.gene061258.t1 | MTR_7g100510 | 36.134 | 119 | 53 | 3 | 211 | 327 | 190 | 287 | 6.32e-15 | 76.6 |
MS.gene061258.t1 | MTR_4g132430 | 37.415 | 147 | 82 | 6 | 131 | 269 | 43 | 187 | 8.31e-22 | 96.3 |
MS.gene061258.t1 | MTR_2g088000 | 47.436 | 78 | 40 | 1 | 193 | 269 | 332 | 409 | 8.79e-21 | 95.1 |
MS.gene061258.t1 | MTR_4g132430 | 37.415 | 147 | 82 | 6 | 131 | 269 | 177 | 321 | 9.20e-21 | 94.7 |
MS.gene061258.t1 | MTR_3g053330 | 46.154 | 78 | 41 | 1 | 193 | 269 | 234 | 311 | 1.51e-20 | 94.0 |
MS.gene061258.t1 | MTR_4g107970 | 39.815 | 108 | 51 | 2 | 177 | 270 | 132 | 239 | 4.85e-20 | 92.8 |
MS.gene061258.t1 | MTR_2g023930 | 47.436 | 78 | 40 | 1 | 193 | 269 | 288 | 365 | 5.61e-20 | 92.8 |
MS.gene061258.t1 | MTR_4g107970 | 39.815 | 108 | 51 | 2 | 177 | 270 | 209 | 316 | 8.93e-20 | 92.0 |
MS.gene061258.t1 | MTR_5g097490 | 50.667 | 75 | 37 | 0 | 196 | 270 | 238 | 312 | 1.16e-19 | 90.5 |
MS.gene061258.t1 | MTR_5g097490 | 52.542 | 59 | 27 | 1 | 211 | 269 | 93 | 150 | 1.66e-11 | 65.9 |
MS.gene061258.t1 | MTR_2g045360 | 32.161 | 199 | 95 | 9 | 194 | 364 | 195 | 381 | 1.52e-19 | 90.5 |
MS.gene061258.t1 | MTR_7g110720 | 35.333 | 150 | 69 | 4 | 121 | 269 | 154 | 276 | 2.28e-19 | 90.1 |
MS.gene061258.t1 | MTR_7g009730 | 40.164 | 122 | 57 | 5 | 150 | 266 | 166 | 276 | 2.37e-19 | 90.9 |
MS.gene061258.t1 | MTR_7g110720 | 46.154 | 78 | 41 | 1 | 193 | 269 | 172 | 249 | 4.69e-19 | 89.0 |
MS.gene061258.t1 | MTR_4g094412 | 47.436 | 78 | 40 | 1 | 194 | 270 | 218 | 295 | 5.42e-19 | 89.4 |
MS.gene061258.t1 | MTR_7g062220 | 53.425 | 73 | 33 | 1 | 197 | 268 | 110 | 182 | 5.95e-19 | 87.4 |
MS.gene061258.t1 | MTR_4g094412 | 47.436 | 78 | 40 | 1 | 194 | 270 | 227 | 304 | 5.99e-19 | 89.4 |
MS.gene061258.t1 | MTR_1g077780 | 44.737 | 76 | 42 | 0 | 194 | 269 | 46 | 121 | 9.43e-19 | 82.8 |
MS.gene061258.t1 | MTR_2g105060 | 48.148 | 81 | 39 | 2 | 192 | 269 | 74 | 154 | 1.18e-18 | 85.1 |
MS.gene061258.t1 | MTR_6g086555 | 43.590 | 78 | 43 | 1 | 197 | 273 | 193 | 270 | 1.50e-18 | 87.4 |
MS.gene061258.t1 | MTR_2g105060 | 48.148 | 81 | 39 | 2 | 192 | 269 | 149 | 229 | 2.08e-18 | 85.9 |
MS.gene061258.t1 | MTR_4g130900 | 40.650 | 123 | 54 | 4 | 148 | 270 | 316 | 419 | 3.01e-18 | 87.0 |
MS.gene061258.t1 | MTR_1g009613 | 38.542 | 96 | 58 | 1 | 186 | 280 | 238 | 333 | 3.23e-18 | 85.9 |
MS.gene061258.t1 | MTR_7g109600 | 34.000 | 150 | 72 | 5 | 182 | 304 | 16 | 165 | 6.26e-18 | 83.6 |
MS.gene061258.t1 | MTR_1g078260 | 47.368 | 76 | 38 | 2 | 197 | 271 | 234 | 308 | 1.63e-17 | 84.7 |
MS.gene061258.t1 | MTR_4g007060 | 42.697 | 89 | 48 | 3 | 184 | 269 | 100 | 188 | 2.18e-17 | 82.4 |
MS.gene061258.t1 | MTR_4g007060 | 42.697 | 89 | 48 | 3 | 184 | 269 | 134 | 222 | 2.71e-17 | 82.8 |
MS.gene061258.t1 | MTR_4g049760 | 45.333 | 75 | 40 | 1 | 196 | 269 | 276 | 350 | 3.10e-17 | 84.3 |
MS.gene061258.t1 | MTR_4g049790 | 46.154 | 78 | 41 | 1 | 193 | 269 | 295 | 372 | 5.83e-17 | 83.6 |
MS.gene061258.t1 | MTR_3g108960 | 41.379 | 87 | 50 | 1 | 181 | 266 | 285 | 371 | 1.56e-16 | 81.3 |
MS.gene061258.t1 | MTR_1g013760 | 46.575 | 73 | 36 | 2 | 197 | 266 | 125 | 197 | 3.02e-16 | 79.0 |
MS.gene061258.t1 | MTR_4g094908 | 42.169 | 83 | 44 | 2 | 188 | 266 | 241 | 323 | 4.74e-16 | 79.3 |
MS.gene061258.t1 | MTR_5g016610 | 41.935 | 93 | 52 | 2 | 186 | 277 | 175 | 266 | 5.85e-16 | 78.2 |
MS.gene061258.t1 | MTR_3g106060 | 46.667 | 60 | 31 | 1 | 208 | 266 | 136 | 195 | 7.98e-16 | 78.2 |
MS.gene061258.t1 | MTR_4g127040 | 37.363 | 91 | 56 | 1 | 186 | 275 | 221 | 311 | 1.90e-15 | 77.4 |
MS.gene061258.t1 | MTR_8g087000 | 45.902 | 61 | 32 | 1 | 211 | 270 | 78 | 138 | 3.31e-15 | 75.5 |
MS.gene061258.t1 | MTR_8g087000 | 45.902 | 61 | 32 | 1 | 211 | 270 | 77 | 137 | 3.42e-15 | 75.5 |
MS.gene061258.t1 | MTR_8g098945 | 48.387 | 62 | 31 | 1 | 209 | 269 | 128 | 189 | 4.91e-15 | 75.5 |
MS.gene061258.t1 | MTR_1g013790 | 41.772 | 79 | 43 | 2 | 194 | 269 | 83 | 161 | 5.32e-15 | 75.1 |
MS.gene061258.t1 | MTR_3g009470 | 49.275 | 69 | 34 | 1 | 210 | 278 | 280 | 347 | 5.71e-15 | 77.0 |
MS.gene061258.t1 | MTR_2g083870 | 34.314 | 102 | 60 | 2 | 176 | 270 | 40 | 141 | 8.07e-15 | 74.7 |
MS.gene061258.t1 | MTR_8g028565 | 46.667 | 60 | 31 | 1 | 211 | 269 | 156 | 215 | 1.23e-14 | 75.1 |
MS.gene061258.t1 | MTR_2g016770 | 45.000 | 60 | 32 | 1 | 211 | 269 | 28 | 87 | 1.42e-14 | 72.8 |
MS.gene061258.t1 | MTR_2g016770 | 45.000 | 60 | 32 | 1 | 211 | 269 | 36 | 95 | 1.45e-14 | 72.8 |
MS.gene061258.t1 | MTR_2g024380 | 36.170 | 94 | 55 | 3 | 186 | 278 | 231 | 320 | 1.71e-14 | 75.5 |
MS.gene061258.t1 | MTR_3g031220 | 54.098 | 61 | 27 | 1 | 210 | 270 | 198 | 257 | 2.31e-14 | 74.7 |
MS.gene061258.t1 | MTR_3g031220 | 39.080 | 87 | 36 | 1 | 144 | 230 | 316 | 385 | 5.41e-11 | 64.3 |
MS.gene061258.t1 | MTR_1g099600 | 36.782 | 87 | 52 | 2 | 185 | 270 | 162 | 246 | 3.26e-14 | 73.6 |
MS.gene061258.t1 | MTR_2g024350 | 45.000 | 60 | 32 | 1 | 211 | 269 | 9 | 68 | 3.68e-14 | 72.0 |
MS.gene061258.t1 | MTR_8g069935 | 36.538 | 104 | 63 | 3 | 184 | 284 | 304 | 407 | 1.18e-13 | 72.8 |
MS.gene061258.t1 | MTR_0117s0040 | 37.143 | 105 | 57 | 2 | 173 | 268 | 29 | 133 | 1.19e-13 | 70.9 |
MS.gene061258.t1 | MTR_7g079040 | 36.047 | 86 | 49 | 2 | 186 | 270 | 135 | 215 | 1.24e-13 | 72.0 |
MS.gene061258.t1 | MTR_2g032030 | 44.262 | 61 | 33 | 1 | 211 | 270 | 268 | 328 | 1.33e-13 | 72.8 |
MS.gene061258.t1 | MTR_2g032030 | 45.000 | 60 | 32 | 1 | 211 | 269 | 268 | 327 | 1.48e-13 | 72.4 |
MS.gene061258.t1 | MTR_1g070455 | 37.500 | 80 | 49 | 1 | 188 | 266 | 271 | 350 | 2.27e-13 | 71.6 |
MS.gene061258.t1 | MTR_4g047580 | 38.571 | 70 | 42 | 1 | 193 | 261 | 264 | 333 | 2.62e-12 | 68.9 |
MS.gene061258.t1 | MTR_5g097500 | 41.667 | 72 | 42 | 0 | 198 | 269 | 218 | 289 | 2.85e-12 | 67.8 |
MS.gene061258.t1 | MTR_5g029850 | 54.237 | 59 | 27 | 0 | 169 | 227 | 10 | 68 | 3.24e-12 | 62.4 |
MS.gene061258.t1 | MTR_8g067635 | 41.429 | 70 | 40 | 1 | 210 | 278 | 349 | 418 | 5.53e-12 | 67.8 |
MS.gene061258.t1 | MTR_5g044695 | 52.174 | 46 | 22 | 0 | 193 | 238 | 60 | 105 | 7.11e-12 | 62.4 |
MS.gene061258.t1 | MTR_8g027860 | 45.000 | 60 | 30 | 1 | 209 | 265 | 135 | 194 | 7.59e-12 | 66.6 |
MS.gene061258.t1 | MTR_5g074200 | 28.986 | 138 | 82 | 4 | 132 | 269 | 157 | 278 | 8.03e-12 | 66.6 |
MS.gene061258.t1 | MTR_3g090860 | 46.667 | 60 | 29 | 1 | 209 | 265 | 132 | 191 | 1.88e-11 | 65.5 |
MS.gene061258.t1 | MTR_2g075680 | 38.614 | 101 | 52 | 3 | 173 | 265 | 108 | 206 | 2.19e-11 | 65.1 |
MS.gene061258.t1 | MTR_8g099350 | 36.170 | 94 | 56 | 2 | 175 | 265 | 98 | 190 | 2.55e-11 | 65.1 |
MS.gene061258.t1 | MTR_8g067650 | 35.000 | 100 | 59 | 3 | 181 | 278 | 313 | 408 | 2.59e-11 | 65.9 |
MS.gene061258.t1 | MTR_7g117200 | 45.000 | 60 | 30 | 1 | 209 | 265 | 117 | 176 | 2.84e-11 | 64.7 |
MS.gene061258.t1 | MTR_2g075700 | 37.000 | 100 | 55 | 3 | 173 | 265 | 104 | 202 | 3.06e-11 | 64.7 |
MS.gene061258.t1 | MTR_2g075750 | 38.158 | 76 | 43 | 2 | 193 | 265 | 12 | 86 | 4.99e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061258.t1 | AT2G47260 | 66.981 | 106 | 35 | 0 | 180 | 285 | 144 | 249 | 2.39e-42 | 152 |
MS.gene061258.t1 | AT4G18170 | 48.571 | 175 | 76 | 5 | 105 | 274 | 71 | 236 | 3.53e-39 | 143 |
MS.gene061258.t1 | AT1G69310 | 69.048 | 84 | 26 | 0 | 183 | 266 | 120 | 203 | 3.49e-35 | 132 |
MS.gene061258.t1 | AT1G69310 | 69.048 | 84 | 26 | 0 | 183 | 266 | 120 | 203 | 3.49e-35 | 132 |
MS.gene061258.t1 | AT1G69310 | 69.048 | 84 | 26 | 0 | 183 | 266 | 120 | 203 | 3.49e-35 | 132 |
MS.gene061258.t1 | AT5G49520 | 65.347 | 101 | 34 | 1 | 180 | 280 | 191 | 290 | 2.92e-34 | 132 |
MS.gene061258.t1 | AT1G29860 | 65.854 | 82 | 28 | 0 | 194 | 275 | 120 | 201 | 2.97e-33 | 126 |
MS.gene061258.t1 | AT3G62340 | 63.953 | 86 | 30 | 1 | 187 | 272 | 96 | 180 | 9.32e-33 | 125 |
MS.gene061258.t1 | AT5G46350 | 45.139 | 144 | 75 | 1 | 132 | 275 | 109 | 248 | 8.91e-32 | 124 |
MS.gene061258.t1 | AT2G44745 | 61.176 | 85 | 33 | 0 | 183 | 267 | 118 | 202 | 7.13e-31 | 118 |
MS.gene061258.t1 | AT1G69310 | 64.286 | 84 | 26 | 1 | 183 | 266 | 120 | 199 | 1.24e-29 | 117 |
MS.gene061258.t1 | AT2G46130 | 54.945 | 91 | 33 | 1 | 189 | 271 | 9 | 99 | 6.88e-29 | 109 |
MS.gene061258.t1 | AT4G39410 | 62.353 | 85 | 31 | 1 | 183 | 266 | 195 | 279 | 4.97e-28 | 113 |
MS.gene061258.t1 | AT3G01970 | 61.972 | 71 | 27 | 0 | 196 | 266 | 51 | 121 | 2.18e-27 | 106 |
MS.gene061258.t1 | AT5G13080 | 61.429 | 70 | 27 | 0 | 197 | 266 | 54 | 123 | 7.99e-27 | 105 |
MS.gene061258.t1 | AT1G64000 | 53.191 | 94 | 36 | 1 | 186 | 271 | 90 | 183 | 1.23e-26 | 106 |
MS.gene061258.t1 | AT5G41570 | 49.020 | 102 | 51 | 1 | 175 | 276 | 64 | 164 | 4.79e-26 | 104 |
MS.gene061258.t1 | AT5G26170 | 58.904 | 73 | 30 | 0 | 196 | 268 | 99 | 171 | 1.59e-25 | 102 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 186 | 276 | 4.74e-25 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 35 | 103 | 3.67e-15 | 77.0 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 186 | 276 | 4.74e-25 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 35 | 103 | 3.67e-15 | 77.0 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 186 | 276 | 4.74e-25 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 35 | 103 | 3.67e-15 | 77.0 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 186 | 276 | 4.74e-25 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 35 | 103 | 3.67e-15 | 77.0 |
MS.gene061258.t1 | AT2G21900 | 46.535 | 101 | 45 | 2 | 175 | 272 | 77 | 171 | 5.88e-25 | 102 |
MS.gene061258.t1 | AT5G07100 | 47.917 | 96 | 50 | 0 | 188 | 283 | 119 | 214 | 6.26e-25 | 102 |
MS.gene061258.t1 | AT5G07100 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 8.00e-14 | 70.9 |
MS.gene061258.t1 | AT5G07100 | 47.917 | 96 | 50 | 0 | 188 | 283 | 119 | 214 | 6.26e-25 | 102 |
MS.gene061258.t1 | AT5G07100 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 8.00e-14 | 70.9 |
MS.gene061258.t1 | AT5G07100 | 47.917 | 96 | 50 | 0 | 188 | 283 | 119 | 214 | 6.26e-25 | 102 |
MS.gene061258.t1 | AT5G07100 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 8.00e-14 | 70.9 |
MS.gene061258.t1 | AT5G07100 | 47.917 | 96 | 50 | 0 | 188 | 283 | 119 | 214 | 6.26e-25 | 102 |
MS.gene061258.t1 | AT5G07100 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 8.00e-14 | 70.9 |
MS.gene061258.t1 | AT2G03340 | 36.095 | 169 | 80 | 3 | 130 | 298 | 353 | 493 | 1.03e-24 | 106 |
MS.gene061258.t1 | AT2G03340 | 58.333 | 60 | 24 | 1 | 210 | 269 | 250 | 308 | 7.09e-16 | 80.1 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 290 | 380 | 1.28e-24 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 139 | 207 | 5.82e-15 | 77.0 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 322 | 412 | 1.42e-24 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 171 | 239 | 6.00e-15 | 77.0 |
MS.gene061258.t1 | AT4G26640 | 51.648 | 91 | 44 | 0 | 191 | 281 | 362 | 452 | 1.78e-24 | 106 |
MS.gene061258.t1 | AT4G26640 | 54.286 | 70 | 31 | 1 | 210 | 279 | 211 | 279 | 6.30e-15 | 77.0 |
MS.gene061258.t1 | AT5G07100 | 47.917 | 96 | 50 | 0 | 188 | 283 | 212 | 307 | 2.25e-24 | 102 |
MS.gene061258.t1 | AT5G07100 | 50.000 | 60 | 30 | 0 | 210 | 269 | 117 | 176 | 1.41e-13 | 71.6 |
MS.gene061258.t1 | AT5G56270 | 56.250 | 80 | 35 | 0 | 191 | 270 | 468 | 547 | 2.50e-24 | 106 |
MS.gene061258.t1 | AT5G56270 | 55.000 | 60 | 26 | 1 | 210 | 269 | 273 | 331 | 5.19e-15 | 77.8 |
MS.gene061258.t1 | AT1G13960 | 57.534 | 73 | 31 | 0 | 197 | 269 | 243 | 315 | 2.73e-24 | 103 |
MS.gene061258.t1 | AT1G13960 | 53.731 | 67 | 30 | 1 | 210 | 276 | 76 | 141 | 4.02e-16 | 79.7 |
MS.gene061258.t1 | AT4G26440 | 54.118 | 85 | 39 | 0 | 194 | 278 | 356 | 440 | 3.06e-24 | 105 |
MS.gene061258.t1 | AT4G26440 | 50.725 | 69 | 33 | 1 | 210 | 278 | 178 | 245 | 3.72e-15 | 77.8 |
MS.gene061258.t1 | AT2G30250 | 56.627 | 83 | 36 | 0 | 191 | 273 | 309 | 391 | 4.78e-24 | 103 |
MS.gene061258.t1 | AT2G30250 | 44.444 | 72 | 39 | 1 | 210 | 281 | 166 | 236 | 3.10e-12 | 68.2 |
MS.gene061258.t1 | AT1G13960 | 57.534 | 73 | 31 | 0 | 197 | 269 | 396 | 468 | 5.73e-24 | 104 |
MS.gene061258.t1 | AT1G13960 | 53.731 | 67 | 30 | 1 | 210 | 276 | 229 | 294 | 5.42e-16 | 80.5 |
MS.gene061258.t1 | AT2G38470 | 53.750 | 80 | 37 | 0 | 191 | 270 | 343 | 422 | 6.64e-24 | 104 |
MS.gene061258.t1 | AT2G38470 | 51.667 | 60 | 28 | 1 | 210 | 269 | 184 | 242 | 1.96e-12 | 69.3 |
MS.gene061258.t1 | AT3G01080 | 33.113 | 151 | 80 | 2 | 140 | 269 | 253 | 403 | 9.52e-24 | 103 |
MS.gene061258.t1 | AT3G01080 | 56.667 | 60 | 25 | 1 | 210 | 269 | 205 | 263 | 1.75e-16 | 81.6 |
MS.gene061258.t1 | AT2G46130 | 50.549 | 91 | 33 | 2 | 189 | 271 | 9 | 95 | 1.47e-23 | 95.1 |
MS.gene061258.t1 | AT3G01080 | 56.164 | 73 | 32 | 0 | 197 | 269 | 293 | 365 | 3.27e-23 | 101 |
MS.gene061258.t1 | AT3G01080 | 56.667 | 60 | 25 | 1 | 210 | 269 | 167 | 225 | 1.91e-16 | 81.3 |
MS.gene061258.t1 | AT5G64810 | 51.389 | 72 | 35 | 0 | 197 | 268 | 97 | 168 | 9.54e-23 | 95.5 |
MS.gene061258.t1 | AT2G04880 | 52.703 | 74 | 35 | 0 | 196 | 269 | 269 | 342 | 3.51e-22 | 99.0 |
MS.gene061258.t1 | AT2G04880 | 53.226 | 62 | 28 | 1 | 209 | 270 | 110 | 170 | 3.04e-14 | 74.7 |
MS.gene061258.t1 | AT2G04880 | 48.352 | 91 | 40 | 1 | 186 | 269 | 276 | 366 | 3.60e-22 | 99.0 |
MS.gene061258.t1 | AT2G04880 | 53.226 | 62 | 28 | 1 | 209 | 270 | 110 | 170 | 3.24e-14 | 74.7 |
MS.gene061258.t1 | AT4G04450 | 47.059 | 85 | 43 | 2 | 193 | 275 | 181 | 265 | 1.61e-20 | 93.6 |
MS.gene061258.t1 | AT1G55600 | 52.055 | 73 | 35 | 0 | 197 | 269 | 294 | 366 | 3.07e-20 | 93.2 |
MS.gene061258.t1 | AT4G22070 | 48.718 | 78 | 39 | 1 | 193 | 269 | 280 | 357 | 3.74e-20 | 93.2 |
MS.gene061258.t1 | AT4G22070 | 48.718 | 78 | 39 | 1 | 193 | 269 | 280 | 357 | 3.74e-20 | 93.2 |
MS.gene061258.t1 | AT4G22070 | 48.718 | 78 | 39 | 1 | 193 | 269 | 280 | 357 | 3.74e-20 | 93.2 |
MS.gene061258.t1 | AT4G22070 | 48.718 | 78 | 39 | 1 | 193 | 269 | 280 | 357 | 3.74e-20 | 93.2 |
MS.gene061258.t1 | AT4G04450 | 47.059 | 85 | 43 | 2 | 193 | 275 | 275 | 359 | 3.84e-20 | 93.2 |
MS.gene061258.t1 | AT1G62300 | 48.718 | 78 | 39 | 1 | 193 | 269 | 295 | 372 | 5.03e-20 | 92.8 |
MS.gene061258.t1 | AT5G15130 | 46.835 | 79 | 41 | 1 | 193 | 270 | 168 | 246 | 1.08e-19 | 91.7 |
MS.gene061258.t1 | AT5G15130 | 46.835 | 79 | 41 | 1 | 193 | 270 | 210 | 288 | 1.18e-19 | 91.7 |
MS.gene061258.t1 | AT2G37260 | 39.450 | 109 | 61 | 2 | 164 | 269 | 223 | 329 | 1.90e-19 | 89.4 |
MS.gene061258.t1 | AT2G37260 | 48.750 | 80 | 35 | 3 | 211 | 288 | 84 | 159 | 2.80e-14 | 74.3 |
MS.gene061258.t1 | AT2G37260 | 39.450 | 109 | 61 | 2 | 164 | 269 | 225 | 331 | 1.92e-19 | 89.4 |
MS.gene061258.t1 | AT2G37260 | 48.750 | 80 | 35 | 3 | 211 | 288 | 86 | 161 | 2.82e-14 | 74.3 |
MS.gene061258.t1 | AT2G37260 | 39.450 | 109 | 61 | 2 | 164 | 269 | 305 | 411 | 2.33e-19 | 90.1 |
MS.gene061258.t1 | AT2G37260 | 48.750 | 80 | 35 | 3 | 211 | 288 | 166 | 241 | 4.26e-14 | 74.3 |
MS.gene061258.t1 | AT4G01720 | 43.000 | 100 | 44 | 2 | 171 | 269 | 212 | 299 | 2.63e-19 | 90.5 |
MS.gene061258.t1 | AT1G68150 | 47.436 | 78 | 40 | 1 | 194 | 270 | 219 | 296 | 3.34e-19 | 89.0 |
MS.gene061258.t1 | AT4G30935 | 38.356 | 146 | 70 | 4 | 126 | 270 | 265 | 391 | 6.97e-19 | 89.0 |
MS.gene061258.t1 | AT5G43290 | 50.000 | 78 | 37 | 2 | 197 | 272 | 100 | 177 | 3.00e-18 | 84.7 |
MS.gene061258.t1 | AT1G18860 | 44.872 | 78 | 42 | 1 | 193 | 269 | 222 | 299 | 4.09e-18 | 87.0 |
MS.gene061258.t1 | AT4G31800 | 51.613 | 62 | 29 | 1 | 209 | 269 | 110 | 171 | 1.25e-17 | 82.4 |
MS.gene061258.t1 | AT1G80840 | 42.000 | 100 | 50 | 4 | 175 | 269 | 110 | 206 | 1.53e-17 | 83.2 |
MS.gene061258.t1 | AT4G31800 | 51.613 | 62 | 29 | 1 | 209 | 269 | 175 | 236 | 2.33e-17 | 82.8 |
MS.gene061258.t1 | AT2G23320 | 46.341 | 82 | 43 | 1 | 186 | 266 | 216 | 297 | 3.21e-17 | 82.4 |
MS.gene061258.t1 | AT4G31550 | 43.902 | 82 | 45 | 1 | 186 | 266 | 221 | 302 | 5.67e-17 | 82.0 |
MS.gene061258.t1 | AT3G01080 | 56.667 | 60 | 25 | 1 | 210 | 269 | 205 | 263 | 8.11e-17 | 81.6 |
MS.gene061258.t1 | AT2G24570 | 43.902 | 82 | 45 | 1 | 186 | 266 | 219 | 300 | 1.08e-16 | 80.9 |
MS.gene061258.t1 | AT2G25000 | 50.000 | 62 | 30 | 1 | 209 | 269 | 102 | 163 | 1.61e-16 | 79.0 |
MS.gene061258.t1 | AT2G25000 | 50.000 | 62 | 30 | 1 | 209 | 269 | 102 | 163 | 1.61e-16 | 79.0 |
MS.gene061258.t1 | AT2G25000 | 50.000 | 62 | 30 | 1 | 209 | 269 | 124 | 185 | 2.65e-16 | 78.6 |
MS.gene061258.t1 | AT4G31550 | 42.683 | 82 | 46 | 1 | 186 | 266 | 222 | 303 | 3.10e-16 | 79.7 |
MS.gene061258.t1 | AT2G25000 | 50.000 | 62 | 30 | 1 | 209 | 269 | 145 | 206 | 4.15e-16 | 78.6 |
MS.gene061258.t1 | AT1G69810 | 34.211 | 114 | 65 | 4 | 167 | 278 | 108 | 213 | 8.43e-16 | 78.6 |
MS.gene061258.t1 | AT1G69810 | 34.211 | 114 | 65 | 4 | 167 | 278 | 166 | 271 | 1.30e-15 | 78.6 |
MS.gene061258.t1 | AT2G30590 | 40.244 | 82 | 48 | 1 | 186 | 266 | 289 | 370 | 1.39e-15 | 78.6 |
MS.gene061258.t1 | AT5G52830 | 41.176 | 85 | 45 | 3 | 186 | 269 | 145 | 225 | 2.26e-15 | 77.4 |
MS.gene061258.t1 | AT5G28650 | 40.244 | 82 | 48 | 1 | 186 | 266 | 238 | 319 | 3.21e-15 | 76.6 |
MS.gene061258.t1 | AT1G30650 | 39.130 | 92 | 52 | 3 | 183 | 270 | 187 | 278 | 3.86e-15 | 77.4 |
MS.gene061258.t1 | AT1G29280 | 43.478 | 69 | 38 | 1 | 203 | 270 | 67 | 135 | 4.40e-15 | 75.5 |
MS.gene061258.t1 | AT4G24240 | 40.244 | 82 | 48 | 1 | 186 | 266 | 257 | 338 | 4.53e-15 | 76.6 |
MS.gene061258.t1 | AT3G58710 | 39.130 | 92 | 49 | 2 | 185 | 269 | 39 | 130 | 6.96e-15 | 75.1 |
MS.gene061258.t1 | AT3G04670 | 40.244 | 82 | 48 | 1 | 186 | 266 | 238 | 319 | 1.05e-14 | 75.1 |
MS.gene061258.t1 | AT3G58710 | 31.707 | 123 | 77 | 2 | 154 | 269 | 9 | 131 | 3.18e-14 | 73.2 |
MS.gene061258.t1 | AT2G34830 | 36.957 | 92 | 54 | 3 | 183 | 270 | 185 | 276 | 4.34e-14 | 74.3 |
MS.gene061258.t1 | AT2G34830 | 37.363 | 91 | 53 | 3 | 183 | 269 | 194 | 284 | 4.57e-14 | 73.9 |
MS.gene061258.t1 | AT4G01250 | 45.000 | 60 | 32 | 1 | 211 | 269 | 129 | 188 | 9.40e-14 | 72.0 |
MS.gene061258.t1 | AT5G45050 | 39.326 | 89 | 49 | 2 | 184 | 271 | 1019 | 1103 | 1.48e-13 | 73.6 |
MS.gene061258.t1 | AT5G45050 | 39.326 | 89 | 49 | 2 | 184 | 271 | 1158 | 1242 | 1.48e-13 | 73.6 |
MS.gene061258.t1 | AT5G45050 | 39.326 | 89 | 49 | 2 | 184 | 271 | 1130 | 1214 | 1.62e-13 | 73.2 |
MS.gene061258.t1 | AT5G24110 | 35.433 | 127 | 71 | 5 | 174 | 295 | 77 | 197 | 5.09e-13 | 69.7 |
MS.gene061258.t1 | AT4G23550 | 40.000 | 75 | 43 | 2 | 197 | 270 | 128 | 201 | 1.72e-12 | 68.6 |
MS.gene061258.t1 | AT1G66560 | 45.763 | 59 | 29 | 1 | 210 | 265 | 103 | 161 | 5.13e-12 | 66.2 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.61e-12 | 68.6 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.44e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.61e-12 | 68.6 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.44e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.86e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 7.11e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.86e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 7.11e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.23e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.68e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.23e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 7.04e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.34e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.61e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.48e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.85e-11 | 65.1 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.67e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 6.66e-11 | 65.1 |
MS.gene061258.t1 | AT2G46400 | 37.079 | 89 | 53 | 1 | 180 | 265 | 74 | 162 | 7.76e-12 | 66.2 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 8.33e-12 | 67.8 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 466 | 526 | 8.35e-11 | 64.7 |
MS.gene061258.t1 | AT4G12020 | 43.678 | 87 | 37 | 3 | 148 | 230 | 516 | 594 | 8.48e-12 | 68.2 |
MS.gene061258.t1 | AT4G12020 | 45.161 | 62 | 33 | 1 | 208 | 269 | 399 | 459 | 7.37e-11 | 65.1 |
MS.gene061258.t1 | AT4G23810 | 34.259 | 108 | 58 | 3 | 165 | 265 | 115 | 216 | 1.59e-11 | 65.5 |
MS.gene061258.t1 | AT1G66600 | 37.500 | 88 | 50 | 2 | 183 | 265 | 74 | 161 | 1.80e-11 | 64.3 |
MS.gene061258.t1 | AT4G11070 | 37.079 | 89 | 47 | 3 | 180 | 265 | 85 | 167 | 2.64e-11 | 64.3 |
Find 102 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTGTTCTTCTTCTTCTT+TGG | 0.208653 | 8.3:+6352844 | None:intergenic |
CCAACTCTATAGAGACCTTA+TGG | 0.212814 | 8.3:-6351254 | MS.gene061258:intron |
TTTCCCTTGTTCTTCTTGTT+TGG | 0.224161 | 8.3:+6353689 | None:intergenic |
GTTCAAAATCAAGACAATTA+TGG | 0.244462 | 8.3:-6352005 | MS.gene061258:CDS |
ATGAACTCTTCAACATCTTT+TGG | 0.249819 | 8.3:-6352035 | MS.gene061258:CDS |
GGGATCATGCCTGATACTTC+TGG | 0.288980 | 8.3:-6352296 | MS.gene061258:CDS |
TCTTCTGCTTCATCTCCTTC+AGG | 0.297610 | 8.3:+6353272 | None:intergenic |
CACCCAGCTGCCTCCTTTAC+CGG | 0.298102 | 8.3:-6353444 | MS.gene061258:CDS |
CAACAATCTTCTTCCTTTGC+TGG | 0.300661 | 8.3:-6353578 | MS.gene061258:CDS |
GGTTATAGGTGGCGCAAATA+TGG | 0.310546 | 8.3:-6352763 | MS.gene061258:CDS |
GTCTTGAAAGTAACTCTTGC+TGG | 0.321436 | 8.3:+6352814 | None:intergenic |
GTTGTTGGTAGTTCTGTTCT+TGG | 0.325908 | 8.3:-6352230 | MS.gene061258:CDS |
CATGGCTCGTTTCTTGTTGA+TGG | 0.326829 | 8.3:-6350970 | MS.gene061258:CDS |
GATGTTGGTGGACCTGTTCT+TGG | 0.334569 | 8.3:+6352270 | None:intergenic |
TGTTGAAGGAATTGTTATAA+TGG | 0.351296 | 8.3:+6352099 | None:intergenic |
GTCTGCAACAACAGCTTCAT+TGG | 0.352883 | 8.3:+6353343 | None:intergenic |
GTATGTATATACCTGGGAAA+TGG | 0.359230 | 8.3:+6352718 | None:intergenic |
CTTGTCTCCCTTTCCCCATA+AGG | 0.369935 | 8.3:+6351239 | None:intergenic |
CTTCTTCTACTTTATTCGAT+TGG | 0.383790 | 8.3:-6353517 | MS.gene061258:CDS |
ATCACTTGGATGATGGTTAT+AGG | 0.391942 | 8.3:-6352777 | MS.gene061258:CDS |
TACTTCTGGTTTCCAAGAAC+AGG | 0.411828 | 8.3:-6352282 | MS.gene061258:CDS |
TCTTGGAAACCAGAAGTATC+AGG | 0.414512 | 8.3:+6352287 | None:intergenic |
CAACTCTATAGAGACCTTAT+GGG | 0.415339 | 8.3:-6351253 | MS.gene061258:intron |
GATGACAAATACTAATGATA+TGG | 0.419528 | 8.3:-6351952 | MS.gene061258:intron |
ACAACAATATCAAAGATTTC+AGG | 0.427809 | 8.3:-6352183 | MS.gene061258:CDS |
TTAGCAGCACGCAATAGAAC+CGG | 0.432507 | 8.3:+6352323 | None:intergenic |
CTATTGCGTGCTGCTAACCT+TGG | 0.442428 | 8.3:-6352317 | MS.gene061258:CDS |
TGAAGAAATTGAAGAAGAAA+CGG | 0.446413 | 8.3:+6353370 | None:intergenic |
CGTTTCTTGTTGATGGCAAA+AGG | 0.446969 | 8.3:-6350963 | MS.gene061258:CDS |
GAAGAGAAAGATGAAGATGA+TGG | 0.447085 | 8.3:-6353254 | MS.gene061258:CDS |
GCCGGGGACTGTACCGGTAA+AGG | 0.449845 | 8.3:+6353431 | None:intergenic |
AACAAGAAGAACAAGGGAAA+GGG | 0.454015 | 8.3:-6353686 | MS.gene061258:CDS |
GAAGAAGCGTATTGAGCATT+CGG | 0.463656 | 8.3:-6352402 | MS.gene061258:CDS |
TATTGCGTGCTGCTAACCTT+GGG | 0.464715 | 8.3:-6352316 | MS.gene061258:CDS |
AGGAGGCAGCTGGGTGGTGA+AGG | 0.469762 | 8.3:+6353451 | None:intergenic |
TCCTTTACCGGTACAGTCCC+CGG | 0.470396 | 8.3:-6353432 | MS.gene061258:CDS |
ATAGAGACCTTATGGGGAAA+GGG | 0.478376 | 8.3:-6351246 | MS.gene061258:intron |
CAGCTGGGTGGTGAAGGTGG+TGG | 0.481535 | 8.3:+6353457 | None:intergenic |
GATGGTAAAGCAGGTGAGAA+AGG | 0.482180 | 8.3:+6353644 | None:intergenic |
ATTGAAGAAGAAACGGAGAC+AGG | 0.485157 | 8.3:+6353377 | None:intergenic |
TGGGTGGTGAAGGTGGTGGA+AGG | 0.485262 | 8.3:+6353461 | None:intergenic |
AACACAACTAGCGGTGTTGT+TGG | 0.487241 | 8.3:-6352245 | MS.gene061258:CDS |
AGGCAGCTGGGTGGTGAAGG+TGG | 0.493908 | 8.3:+6353454 | None:intergenic |
TATGTATATACCTGGGAAAT+GGG | 0.497210 | 8.3:+6352719 | None:intergenic |
GTGGTGAAGGTGGTGGAAGG+TGG | 0.497652 | 8.3:+6353464 | None:intergenic |
GCAATAGAACCGGGGATAGG+TGG | 0.499548 | 8.3:+6352333 | None:intergenic |
CGCTAGTTGTGTTGTGATGT+TGG | 0.499668 | 8.3:+6352255 | None:intergenic |
TCAAGACCTCAGACGCGGCC+GGG | 0.504762 | 8.3:+6353414 | None:intergenic |
CAAAAGTGGAGAAATGTTGA+AGG | 0.511250 | 8.3:+6352085 | None:intergenic |
GACGCGGCCGGGGACTGTAC+CGG | 0.513396 | 8.3:+6353425 | None:intergenic |
GAAACGGAGACAGGGGTGGC+CGG | 0.514502 | 8.3:+6353386 | None:intergenic |
TTCAAGACCTCAGACGCGGC+CGG | 0.517112 | 8.3:+6353413 | None:intergenic |
TGCTGACATGTCAGTATCAA+TGG | 0.518443 | 8.3:+6353487 | None:intergenic |
TATAGAGACCTTATGGGGAA+AGG | 0.527236 | 8.3:-6351247 | MS.gene061258:intron |
GTCTGAGGTCTTGAATAATC+CGG | 0.530333 | 8.3:-6353405 | MS.gene061258:CDS |
GTACCGGTAAAGGAGGCAGC+TGG | 0.531164 | 8.3:+6353441 | None:intergenic |
GGTGTGTTGACCTTCATAGC+TGG | 0.534430 | 8.3:+6352355 | None:intergenic |
AAAGAGCGATGTTGATCACT+TGG | 0.537217 | 8.3:-6352791 | MS.gene061258:CDS |
TAGCAGCACGCAATAGAACC+GGG | 0.537381 | 8.3:+6352324 | None:intergenic |
ATCGTGCTAACCAGCTATGA+AGG | 0.539477 | 8.3:-6352365 | MS.gene061258:CDS |
TGGCTATTATATAACAAAGA+TGG | 0.540939 | 8.3:+6352119 | None:intergenic |
CAAGACCTCAGACGCGGCCG+GGG | 0.541690 | 8.3:+6353415 | None:intergenic |
GATGTTGATCACTTGGATGA+TGG | 0.548334 | 8.3:-6352784 | MS.gene061258:CDS |
TTGAAGAAGAAACGGAGACA+GGG | 0.550922 | 8.3:+6353378 | None:intergenic |
CACAGCTCGCGGCGGTGCAA+CGG | 0.551216 | 8.3:+6352429 | None:intergenic |
AATCAAGACAATTATGGTGG+AGG | 0.551997 | 8.3:-6351999 | MS.gene061258:CDS |
GAGTTAACAACATTCAAAAG+TGG | 0.557077 | 8.3:+6352071 | None:intergenic |
ACAGTCCCCGGCCGCGTCTG+AGG | 0.558088 | 8.3:-6353420 | MS.gene061258:CDS |
ATGGTAAAGCAGGTGAGAAA+GGG | 0.570989 | 8.3:+6353645 | None:intergenic |
TACCGGTAAAGGAGGCAGCT+GGG | 0.581455 | 8.3:+6353442 | None:intergenic |
AAACAAGAAGAACAAGGGAA+AGG | 0.586833 | 8.3:-6353687 | MS.gene061258:CDS |
CAAATCGATGTAACCAGCAA+AGG | 0.591633 | 8.3:+6353565 | None:intergenic |
TGATCATCAGATTGTGATGG+TGG | 0.592260 | 8.3:+6353599 | None:intergenic |
TCAACACACCCACCTATCCC+CGG | 0.597983 | 8.3:-6352342 | MS.gene061258:CDS |
AAGTATCAGGCATGATCCCA+AGG | 0.599595 | 8.3:+6352300 | None:intergenic |
GGGGACTGTACCGGTAAAGG+AGG | 0.603300 | 8.3:+6353434 | None:intergenic |
ATGCTGCATGATGGTAAAGC+AGG | 0.604164 | 8.3:+6353635 | None:intergenic |
CAATAGAACCGGGGATAGGT+GGG | 0.604794 | 8.3:+6352334 | None:intergenic |
CAAAATCAAGACAATTATGG+TGG | 0.615149 | 8.3:-6352002 | MS.gene061258:CDS |
CACGCAATAGAACCGGGGAT+AGG | 0.618953 | 8.3:+6352330 | None:intergenic |
GATTCCAAACAAGAAGAACA+AGG | 0.625236 | 8.3:-6353693 | MS.gene061258:CDS |
AGAGGGAAATAGCAAGAGCA+TGG | 0.631429 | 8.3:-6350988 | MS.gene061258:CDS |
TTGCACCGCCGCGAGCTGTG+AGG | 0.633888 | 8.3:-6352426 | MS.gene061258:CDS |
CTTCTTCACCTCACAGCTCG+CGG | 0.648825 | 8.3:+6352418 | None:intergenic |
TAGTTGTGTTGTGATGTTGG+TGG | 0.651734 | 8.3:+6352258 | None:intergenic |
ATGTCAAAGATGCTGCATGA+TGG | 0.652263 | 8.3:+6353626 | None:intergenic |
CTTCACCTCACAGCTCGCGG+CGG | 0.653337 | 8.3:+6352421 | None:intergenic |
TGTTGATCATCAGATTGTGA+TGG | 0.660250 | 8.3:+6353596 | None:intergenic |
ATTCCAAACAAGAAGAACAA+GGG | 0.661863 | 8.3:-6353692 | MS.gene061258:CDS |
CAACATCACAACACAACTAG+CGG | 0.662877 | 8.3:-6352254 | MS.gene061258:CDS |
ATAGCTGGTTAGCACGATCG+AGG | 0.663350 | 8.3:+6352370 | None:intergenic |
GAACATGAAGAAGAACCTGA+AGG | 0.667636 | 8.3:-6353287 | MS.gene061258:CDS |
GACATGTCAGTATCAATGGT+GGG | 0.669023 | 8.3:+6353491 | None:intergenic |
TGAAGAAGAAACGGAGACAG+GGG | 0.670576 | 8.3:+6353379 | None:intergenic |
AACTCTATAGAGACCTTATG+GGG | 0.673907 | 8.3:-6351252 | MS.gene061258:intron |
ACTTGGATGATGGTTATAGG+TGG | 0.678436 | 8.3:-6352774 | MS.gene061258:CDS |
GATCATCAGATTGTGATGGT+GGG | 0.680288 | 8.3:+6353600 | None:intergenic |
AGAAGAAACGGAGACAGGGG+TGG | 0.684451 | 8.3:+6353382 | None:intergenic |
TGACATGTCAGTATCAATGG+TGG | 0.704204 | 8.3:+6353490 | None:intergenic |
CGGTAAAGGAGGCAGCTGGG+TGG | 0.705876 | 8.3:+6353445 | None:intergenic |
ATTATTCAAGACCTCAGACG+CGG | 0.727700 | 8.3:+6353409 | None:intergenic |
AGCAGCACGCAATAGAACCG+GGG | 0.748027 | 8.3:+6352325 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATAATCTAAAGAAA+GGG | + | chr8.3:6352114-6352133 | None:intergenic | 10.0% |
!! | CAAGATAAAAAAAAAAAAAA+AGG | + | chr8.3:6352212-6352231 | None:intergenic | 10.0% |
!! | TATATATATAATCTAAAGAA+AGG | + | chr8.3:6352115-6352134 | None:intergenic | 10.0% |
!!! | AAAAAAAAGTTCAATTTTAG+AGG | + | chr8.3:6352085-6352104 | None:intergenic | 15.0% |
!!! | AAAAAAAGTTCAATTTTAGA+GGG | + | chr8.3:6352084-6352103 | None:intergenic | 15.0% |
!!! | AAAAAGTAACCAATATTTTT+AGG | - | chr8.3:6353344-6353363 | MS.gene061258:CDS | 15.0% |
!!! | AAAAGTAACCAATATTTTTA+GGG | - | chr8.3:6353345-6353364 | MS.gene061258:CDS | 15.0% |
!! | AAAAAAAAAGTGAGCTAAAT+TGG | + | chr8.3:6352186-6352205 | None:intergenic | 20.0% |
!! | ATCATATACAAAAAGCTAAA+CGG | + | chr8.3:6353597-6353616 | None:intergenic | 20.0% |
!! | ATCTTTGTATATAGCTTATA+GGG | + | chr8.3:6353640-6353659 | None:intergenic | 20.0% |
!! | CTAACATACATTAAACAAAA+CGG | + | chr8.3:6351719-6351738 | None:intergenic | 20.0% |
!! | TATAAGCTATATACAAAGAT+GGG | - | chr8.3:6353640-6353659 | MS.gene061258:CDS | 20.0% |
!! | TATTAGTAGCTAGTAATTTA+AGG | - | chr8.3:6352919-6352938 | MS.gene061258:intron | 20.0% |
!! | TGGTTAATGATACTTATTTA+TGG | - | chr8.3:6352849-6352868 | MS.gene061258:CDS | 20.0% |
!! | TTTGACAATAAGAAAAGTAA+TGG | - | chr8.3:6351739-6351758 | MS.gene061258:intron | 20.0% |
!!! | TAGATATTTCTTTCTCATTT+TGG | - | chr8.3:6353207-6353226 | MS.gene061258:CDS | 20.0% |
!!! | TTCTTTAACTTAAATGATGA+TGG | - | chr8.3:6352942-6352961 | MS.gene061258:intron | 20.0% |
! | AAAACAATGCAAACCATTAA+TGG | + | chr8.3:6353294-6353313 | None:intergenic | 25.0% |
! | AAATACACATCATGATTGAA+TGG | + | chr8.3:6353672-6353691 | None:intergenic | 25.0% |
! | ACAACAATATCAAAGATTTC+AGG | - | chr8.3:6352501-6352520 | MS.gene061258:intron | 25.0% |
! | ACTGTTATCTTATTAGATTC+TGG | - | chr8.3:6353119-6353138 | MS.gene061258:intron | 25.0% |
! | CATCTTTGTATATAGCTTAT+AGG | + | chr8.3:6353641-6353660 | None:intergenic | 25.0% |
! | CTATAAGCTATATACAAAGA+TGG | - | chr8.3:6353639-6353658 | MS.gene061258:CDS | 25.0% |
! | CTTGTATATCAATTAGTATC+TGG | - | chr8.3:6352896-6352915 | MS.gene061258:intron | 25.0% |
! | GATGACAAATACTAATGATA+TGG | - | chr8.3:6352732-6352751 | MS.gene061258:CDS | 25.0% |
! | GTTCAAAATCAAGACAATTA+TGG | - | chr8.3:6352679-6352698 | MS.gene061258:intron | 25.0% |
! | TCTTGTTAATTTCCTTCTAT+GGG | - | chr8.3:6353163-6353182 | MS.gene061258:intron | 25.0% |
! | TGAAGAAATTGAAGAAGAAA+CGG | + | chr8.3:6351317-6351336 | None:intergenic | 25.0% |
! | TGGCTATTATATAACAAAGA+TGG | + | chr8.3:6352568-6352587 | None:intergenic | 25.0% |
! | TGTTGAAGGAATTGTTATAA+TGG | + | chr8.3:6352588-6352607 | None:intergenic | 25.0% |
! | TTCTTGTTAATTTCCTTCTA+TGG | - | chr8.3:6353162-6353181 | MS.gene061258:intron | 25.0% |
!! | ATTAATCTGTTTGGTGATAT+AGG | - | chr8.3:6351811-6351830 | MS.gene061258:intron | 25.0% |
!! | GTAATAGTATCTTGATTTGA+TGG | + | chr8.3:6351997-6352016 | None:intergenic | 25.0% |
!!! | AACCAATATTTTTAGGGTTA+GGG | - | chr8.3:6353351-6353370 | MS.gene061258:CDS | 25.0% |
!!! | GTTTAGCTTTTTGTATATGA+TGG | - | chr8.3:6353596-6353615 | MS.gene061258:CDS | 25.0% |
!!! | TAACCAATATTTTTAGGGTT+AGG | - | chr8.3:6353350-6353369 | MS.gene061258:CDS | 25.0% |
!!! | TCTATTCTCCTTTTTTATCA+TGG | - | chr8.3:6353263-6353282 | MS.gene061258:CDS | 25.0% |
!!! | TGCTTTAATTTGTGTTTTGA+AGG | - | chr8.3:6352991-6353010 | MS.gene061258:intron | 25.0% |
AACCCTAACCCTAAAAATAT+TGG | + | chr8.3:6353356-6353375 | None:intergenic | 30.0% | |
AATGTATTGTGTCATGTCAT+GGG | + | chr8.3:6353526-6353545 | None:intergenic | 30.0% | |
ATGATGTGTATTTCCTAAGA+GGG | - | chr8.3:6353679-6353698 | MS.gene061258:CDS | 30.0% | |
ATTCCAAACAAGAAGAACAA+GGG | - | chr8.3:6350992-6351011 | MS.gene061258:intron | 30.0% | |
CAAAATCAAGACAATTATGG+TGG | - | chr8.3:6352682-6352701 | MS.gene061258:intron | 30.0% | |
CAAATACTAATGATATGGTG+AGG | - | chr8.3:6352737-6352756 | MS.gene061258:CDS | 30.0% | |
CTGAAACTGATTAATCTGTT+TGG | - | chr8.3:6351802-6351821 | MS.gene061258:intron | 30.0% | |
CTTCTTCTACTTTATTCGAT+TGG | - | chr8.3:6351167-6351186 | MS.gene061258:intron | 30.0% | |
GAGAATAAATAACCCATAGA+AGG | + | chr8.3:6353178-6353197 | None:intergenic | 30.0% | |
GAGTTAACAACATTCAAAAG+TGG | + | chr8.3:6352616-6352635 | None:intergenic | 30.0% | |
GTACATGTATGTATATACCT+GGG | + | chr8.3:6351975-6351994 | None:intergenic | 30.0% | |
GTGTATTCAATTACTTTGAG+CGG | - | chr8.3:6351645-6351664 | MS.gene061258:intron | 30.0% | |
TAATGTATTGTGTCATGTCA+TGG | + | chr8.3:6353527-6353546 | None:intergenic | 30.0% | |
TATGTATATACCTGGGAAAT+GGG | + | chr8.3:6351968-6351987 | None:intergenic | 30.0% | |
TCAGCTTCATATTCATTCTT+TGG | + | chr8.3:6352818-6352837 | None:intergenic | 30.0% | |
TGTATTCAATTACTTTGAGC+GGG | - | chr8.3:6351646-6351665 | MS.gene061258:intron | 30.0% | |
TTCTTGTTCTTCTTCTTCTT+TGG | + | chr8.3:6351843-6351862 | None:intergenic | 30.0% | |
! | ATGAACTCTTCAACATCTTT+TGG | - | chr8.3:6352649-6352668 | MS.gene061258:intron | 30.0% |
!! | AAAAGTTCAATTTTAGAGGG+AGG | + | chr8.3:6352081-6352100 | None:intergenic | 30.0% |
!! | TTCTTTCTCATTTTGGTACT+TGG | - | chr8.3:6353214-6353233 | MS.gene061258:CDS | 30.0% |
!!! | AATGGTTTGCATTGTTTTGA+TGG | - | chr8.3:6353296-6353315 | MS.gene061258:CDS | 30.0% |
!!! | ATGGTTTGCATTGTTTTGAT+GGG | - | chr8.3:6353297-6353316 | MS.gene061258:CDS | 30.0% |
AAACAAGAAGAACAAGGGAA+AGG | - | chr8.3:6350997-6351016 | MS.gene061258:intron | 35.0% | |
AACAAGAAGAACAAGGGAAA+GGG | - | chr8.3:6350998-6351017 | MS.gene061258:intron | 35.0% | |
AACTCTATAGAGACCTTATG+GGG | - | chr8.3:6353432-6353451 | MS.gene061258:CDS | 35.0% | |
AATCAAGACAATTATGGTGG+AGG | - | chr8.3:6352685-6352704 | MS.gene061258:intron | 35.0% | |
AATGATATGGTGAGGAACAA+TGG | - | chr8.3:6352745-6352764 | MS.gene061258:CDS | 35.0% | |
ATGTATTGTGTCATGTCATG+GGG | + | chr8.3:6353525-6353544 | None:intergenic | 35.0% | |
CAAAAGTGGAGAAATGTTGA+AGG | + | chr8.3:6352602-6352621 | None:intergenic | 35.0% | |
CAACTCTATAGAGACCTTAT+GGG | - | chr8.3:6353431-6353450 | MS.gene061258:CDS | 35.0% | |
CATGATGTGTATTTCCTAAG+AGG | - | chr8.3:6353678-6353697 | MS.gene061258:CDS | 35.0% | |
GAAGAGAAAGATGAAGATGA+TGG | - | chr8.3:6351430-6351449 | MS.gene061258:intron | 35.0% | |
GATTCCAAACAAGAAGAACA+AGG | - | chr8.3:6350991-6351010 | MS.gene061258:intron | 35.0% | |
GGTACATGTATGTATATACC+TGG | + | chr8.3:6351976-6351995 | None:intergenic | 35.0% | |
GTATGTATATACCTGGGAAA+TGG | + | chr8.3:6351969-6351988 | None:intergenic | 35.0% | |
GTATTCAATTACTTTGAGCG+GGG | - | chr8.3:6351647-6351666 | MS.gene061258:intron | 35.0% | |
TAGGGTAAGATGATGAGAAA+AGG | + | chr8.3:6353622-6353641 | None:intergenic | 35.0% | |
TATCATGGCATCACCATTAA+TGG | - | chr8.3:6353278-6353297 | MS.gene061258:CDS | 35.0% | |
TGAAGCTGAAGATGTATGTT+TGG | - | chr8.3:6352829-6352848 | MS.gene061258:CDS | 35.0% | |
TGTTGATCATCAGATTGTGA+TGG | + | chr8.3:6351091-6351110 | None:intergenic | 35.0% | |
TTATCTTGTGTGTGCAAAAC+AGG | - | chr8.3:6352224-6352243 | MS.gene061258:CDS | 35.0% | |
TTTCCCTTGTTCTTCTTGTT+TGG | + | chr8.3:6350998-6351017 | None:intergenic | 35.0% | |
! | AACTCTTCAACATCTTTTGG+TGG | - | chr8.3:6352652-6352671 | MS.gene061258:intron | 35.0% |
! | ACTTTTGCACTCAGATCTAA+AGG | + | chr8.3:6352024-6352043 | None:intergenic | 35.0% |
! | ATCACTTGGATGATGGTTAT+AGG | - | chr8.3:6351907-6351926 | MS.gene061258:intron | 35.0% |
! | CACAAATTAAAGCACTTCAG+CGG | + | chr8.3:6352985-6353004 | None:intergenic | 35.0% |
! | GCTAAGCATTGTAACAATTC+AGG | + | chr8.3:6353382-6353401 | None:intergenic | 35.0% |
! | TGGTGATGCCATGATAAAAA+AGG | + | chr8.3:6353274-6353293 | None:intergenic | 35.0% |
!!! | TTTGCATTGTTTTGATGGGT+AGG | - | chr8.3:6353301-6353320 | MS.gene061258:CDS | 35.0% |
AAAGAGCGATGTTGATCACT+TGG | - | chr8.3:6351893-6351912 | MS.gene061258:intron | 40.0% | |
AACAAAACGGCAAGAACACA+TGG | + | chr8.3:6351706-6351725 | None:intergenic | 40.0% | |
ACTGACAACAGTGAATAACC+CGG | + | chr8.3:6351676-6351695 | None:intergenic | 40.0% | |
AGGATTGTTCTTGTTCATGG+TGG | - | chr8.3:6353321-6353340 | MS.gene061258:CDS | 40.0% | |
ATAGAGACCTTATGGGGAAA+GGG | - | chr8.3:6353438-6353457 | MS.gene061258:CDS | 40.0% | |
ATGATTGCTCCAATGGAGAT+GGG | - | chr8.3:6352781-6352800 | MS.gene061258:CDS | 40.0% | |
ATGGTAAAGCAGGTGAGAAA+GGG | + | chr8.3:6351042-6351061 | None:intergenic | 40.0% | |
ATGTCAAAGATGCTGCATGA+TGG | + | chr8.3:6351061-6351080 | None:intergenic | 40.0% | |
ATTATTCAAGACCTCAGACG+CGG | + | chr8.3:6351278-6351297 | None:intergenic | 40.0% | |
ATTGAAGAAGAAACGGAGAC+AGG | + | chr8.3:6351310-6351329 | None:intergenic | 40.0% | |
CAAATCGATGTAACCAGCAA+AGG | + | chr8.3:6351122-6351141 | None:intergenic | 40.0% | |
CAACAATCTTCTTCCTTTGC+TGG | - | chr8.3:6351106-6351125 | MS.gene061258:intron | 40.0% | |
CAACATCACAACACAACTAG+CGG | - | chr8.3:6352430-6352449 | MS.gene061258:CDS | 40.0% | |
CCAACTCTATAGAGACCTTA+TGG | - | chr8.3:6353430-6353449 | MS.gene061258:CDS | 40.0% | |
CCATAAGGTCTCTATAGAGT+TGG | + | chr8.3:6353433-6353452 | None:intergenic | 40.0% | |
GAACATGAAGAAGAACCTGA+AGG | - | chr8.3:6351397-6351416 | MS.gene061258:intron | 40.0% | |
GACATGTCAGTATCAATGGT+GGG | + | chr8.3:6351196-6351215 | None:intergenic | 40.0% | |
GATCATCAGATTGTGATGGT+GGG | + | chr8.3:6351087-6351106 | None:intergenic | 40.0% | |
GATGTTGATCACTTGGATGA+TGG | - | chr8.3:6351900-6351919 | MS.gene061258:intron | 40.0% | |
GGTAGGATTGTTCTTGTTCA+TGG | - | chr8.3:6353318-6353337 | MS.gene061258:CDS | 40.0% | |
GTCTTGAAAGTAACTCTTGC+TGG | + | chr8.3:6351873-6351892 | None:intergenic | 40.0% | |
GTGAAAGTGAAACCACACTT+CGG | - | chr8.3:6353023-6353042 | MS.gene061258:intron | 40.0% | |
TAGTTGTGTTGTGATGTTGG+TGG | + | chr8.3:6352429-6352448 | None:intergenic | 40.0% | |
TATAGAGACCTTATGGGGAA+AGG | - | chr8.3:6353437-6353456 | MS.gene061258:CDS | 40.0% | |
TATGATTGCTCCAATGGAGA+TGG | - | chr8.3:6352780-6352799 | MS.gene061258:CDS | 40.0% | |
TCAGGATATGATTGCTCCAA+TGG | - | chr8.3:6352774-6352793 | MS.gene061258:CDS | 40.0% | |
TGACATGTCAGTATCAATGG+TGG | + | chr8.3:6351197-6351216 | None:intergenic | 40.0% | |
TGATCATCAGATTGTGATGG+TGG | + | chr8.3:6351088-6351107 | None:intergenic | 40.0% | |
TGCAGTTACAAATGAAGACG+AGG | - | chr8.3:6351587-6351606 | MS.gene061258:intron | 40.0% | |
TGCTGACATGTCAGTATCAA+TGG | + | chr8.3:6351200-6351219 | None:intergenic | 40.0% | |
TTGAAGAAGAAACGGAGACA+GGG | + | chr8.3:6351309-6351328 | None:intergenic | 40.0% | |
! | ACTTGGATGATGGTTATAGG+TGG | - | chr8.3:6351910-6351929 | MS.gene061258:intron | 40.0% |
! | GAAGAAGCGTATTGAGCATT+CGG | - | chr8.3:6352282-6352301 | MS.gene061258:CDS | 40.0% |
! | GTCTGAGGTCTTGAATAATC+CGG | - | chr8.3:6351279-6351298 | MS.gene061258:intron | 40.0% |
! | TCTTCAACAGCAGCATTTTC+AGG | - | chr8.3:6350965-6350984 | MS.gene061258:CDS | 40.0% |
!! | CGTTTCTTGTTGATGGCAAA+AGG | - | chr8.3:6353721-6353740 | MS.gene061258:CDS | 40.0% |
!! | GTTGTTGGTAGTTCTGTTCT+TGG | - | chr8.3:6352454-6352473 | MS.gene061258:intron | 40.0% |
!! | TACTTCTGGTTTCCAAGAAC+AGG | - | chr8.3:6352402-6352421 | MS.gene061258:CDS | 40.0% |
!! | TCTTGGAAACCAGAAGTATC+AGG | + | chr8.3:6352400-6352419 | None:intergenic | 40.0% |
!!! | GGCTGTTTTTGACTGGTTTT+TGG | + | chr8.3:6351947-6351966 | None:intergenic | 40.0% |
AAGTATCAGGCATGATCCCA+AGG | + | chr8.3:6352387-6352406 | None:intergenic | 45.0% | |
AGAGGGAAATAGCAAGAGCA+TGG | - | chr8.3:6353696-6353715 | MS.gene061258:CDS | 45.0% | |
ATCGTGCTAACCAGCTATGA+AGG | - | chr8.3:6352319-6352338 | MS.gene061258:CDS | 45.0% | |
ATGCTGCATGATGGTAAAGC+AGG | + | chr8.3:6351052-6351071 | None:intergenic | 45.0% | |
ATTACTTTGAGCGGGGTTTC+CGG | - | chr8.3:6351654-6351673 | MS.gene061258:intron | 45.0% | |
CATGGCTCGTTTCTTGTTGA+TGG | - | chr8.3:6353714-6353733 | MS.gene061258:CDS | 45.0% | |
CGCTAGTTGTGTTGTGATGT+TGG | + | chr8.3:6352432-6352451 | None:intergenic | 45.0% | |
GATGGTAAAGCAGGTGAGAA+AGG | + | chr8.3:6351043-6351062 | None:intergenic | 45.0% | |
GGTTATAGGTGGCGCAAATA+TGG | - | chr8.3:6351921-6351940 | MS.gene061258:intron | 45.0% | |
GTCTGCAACAACAGCTTCAT+TGG | + | chr8.3:6351344-6351363 | None:intergenic | 45.0% | |
TCAAAAACAGCCCATTTCCC+AGG | - | chr8.3:6351955-6351974 | MS.gene061258:CDS | 45.0% | |
TCTTCTGCTTCATCTCCTTC+AGG | + | chr8.3:6351415-6351434 | None:intergenic | 45.0% | |
TGAAGAAGAAACGGAGACAG+GGG | + | chr8.3:6351308-6351327 | None:intergenic | 45.0% | |
TTAGCAGCACGCAATAGAAC+CGG | + | chr8.3:6352364-6352383 | None:intergenic | 45.0% | |
! | GAGGAACAATGGACTTCTTC+AGG | - | chr8.3:6352756-6352775 | MS.gene061258:CDS | 45.0% |
! | TATTGCGTGCTGCTAACCTT+GGG | - | chr8.3:6352368-6352387 | MS.gene061258:CDS | 45.0% |
!! | AACACAACTAGCGGTGTTGT+TGG | - | chr8.3:6352439-6352458 | MS.gene061258:CDS | 45.0% |
!! | GCTCTTGCTATTTCCCTCTT+AGG | + | chr8.3:6353695-6353714 | None:intergenic | 45.0% |
!!! | GGAAATGGGCTGTTTTTGAC+TGG | + | chr8.3:6351954-6351973 | None:intergenic | 45.0% |
!! | TATATTAATCATATAAATAA+AGG | + | chr8.3:6353094-6353113 | None:intergenic | 5.0% |
AAGTGAAACCACACTTCGGC+TGG | - | chr8.3:6353027-6353046 | MS.gene061258:intron | 50.0% | |
ATAGCTGGTTAGCACGATCG+AGG | + | chr8.3:6352317-6352336 | None:intergenic | 50.0% | |
ATTGCTCCAATGGAGATGGG+AGG | - | chr8.3:6352784-6352803 | MS.gene061258:CDS | 50.0% | |
CAATAGAACCGGGGATAGGT+GGG | + | chr8.3:6352353-6352372 | None:intergenic | 50.0% | |
CTTGTCTCCCTTTCCCCATA+AGG | + | chr8.3:6353448-6353467 | None:intergenic | 50.0% | |
GGGATCATGCCTGATACTTC+TGG | - | chr8.3:6352388-6352407 | MS.gene061258:CDS | 50.0% | |
TAGCAGCACGCAATAGAACC+GGG | + | chr8.3:6352363-6352382 | None:intergenic | 50.0% | |
TTACTTTGAGCGGGGTTTCC+GGG | - | chr8.3:6351655-6351674 | MS.gene061258:intron | 50.0% | |
! | CTATTGCGTGCTGCTAACCT+TGG | - | chr8.3:6352367-6352386 | MS.gene061258:CDS | 50.0% |
! | GATGTTGGTGGACCTGTTCT+TGG | + | chr8.3:6352417-6352436 | None:intergenic | 50.0% |
! | GGTGTGTTGACCTTCATAGC+TGG | + | chr8.3:6352332-6352351 | None:intergenic | 50.0% |
AACACATGCCAGCCGAAGTG+TGG | + | chr8.3:6353038-6353057 | None:intergenic | 55.0% | |
AGAAGAAACGGAGACAGGGG+TGG | + | chr8.3:6351305-6351324 | None:intergenic | 55.0% | |
AGCAGCACGCAATAGAACCG+GGG | + | chr8.3:6352362-6352381 | None:intergenic | 55.0% | |
CACGCAATAGAACCGGGGAT+AGG | + | chr8.3:6352357-6352376 | None:intergenic | 55.0% | |
CTTCTTCACCTCACAGCTCG+CGG | + | chr8.3:6352269-6352288 | None:intergenic | 55.0% | |
GCAATAGAACCGGGGATAGG+TGG | + | chr8.3:6352354-6352373 | None:intergenic | 55.0% | |
TACCGGTAAAGGAGGCAGCT+GGG | + | chr8.3:6351245-6351264 | None:intergenic | 55.0% | |
TCAACACACCCACCTATCCC+CGG | - | chr8.3:6352342-6352361 | MS.gene061258:CDS | 55.0% | |
TCCTTTACCGGTACAGTCCC+CGG | - | chr8.3:6351252-6351271 | MS.gene061258:intron | 55.0% | |
CACCCAGCTGCCTCCTTTAC+CGG | - | chr8.3:6351240-6351259 | MS.gene061258:CDS | 60.0% | |
CCAATGGAGATGGGAGGAGC+TGG | - | chr8.3:6352790-6352809 | MS.gene061258:CDS | 60.0% | |
CCAGCTCCTCCCATCTCCAT+TGG | + | chr8.3:6352793-6352812 | None:intergenic | 60.0% | |
GCACTTCAGCGGCACAGACT+TGG | + | chr8.3:6352974-6352993 | None:intergenic | 60.0% | |
TTCAAGACCTCAGACGCGGC+CGG | + | chr8.3:6351274-6351293 | None:intergenic | 60.0% | |
! | GGGGACTGTACCGGTAAAGG+AGG | + | chr8.3:6351253-6351272 | None:intergenic | 60.0% |
! | GTACCGGTAAAGGAGGCAGC+TGG | + | chr8.3:6351246-6351265 | None:intergenic | 60.0% |
!! | GTGGTGAAGGTGGTGGAAGG+TGG | + | chr8.3:6351223-6351242 | None:intergenic | 60.0% |
!! | TGGGTGGTGAAGGTGGTGGA+AGG | + | chr8.3:6351226-6351245 | None:intergenic | 60.0% |
AGGAGGCAGCTGGGTGGTGA+AGG | + | chr8.3:6351236-6351255 | None:intergenic | 65.0% | |
AGGCAGCTGGGTGGTGAAGG+TGG | + | chr8.3:6351233-6351252 | None:intergenic | 65.0% | |
CAGCTGGGTGGTGAAGGTGG+TGG | + | chr8.3:6351230-6351249 | None:intergenic | 65.0% | |
CGGTAAAGGAGGCAGCTGGG+TGG | + | chr8.3:6351242-6351261 | None:intergenic | 65.0% | |
CTTCACCTCACAGCTCGCGG+CGG | + | chr8.3:6352266-6352285 | None:intergenic | 65.0% | |
GAAACGGAGACAGGGGTGGC+CGG | + | chr8.3:6351301-6351320 | None:intergenic | 65.0% | |
TCAAGACCTCAGACGCGGCC+GGG | + | chr8.3:6351273-6351292 | None:intergenic | 65.0% | |
! | GCCGGGGACTGTACCGGTAA+AGG | + | chr8.3:6351256-6351275 | None:intergenic | 65.0% |
CAAGACCTCAGACGCGGCCG+GGG | + | chr8.3:6351272-6351291 | None:intergenic | 70.0% | |
CACAGCTCGCGGCGGTGCAA+CGG | + | chr8.3:6352258-6352277 | None:intergenic | 70.0% | |
TTGCACCGCCGCGAGCTGTG+AGG | - | chr8.3:6352258-6352277 | MS.gene061258:CDS | 70.0% | |
ACAGTCCCCGGCCGCGTCTG+AGG | - | chr8.3:6351264-6351283 | MS.gene061258:intron | 75.0% | |
GACGCGGCCGGGGACTGTAC+CGG | + | chr8.3:6351262-6351281 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 6350956 | 6353750 | 6350956 | ID=MS.gene061258 |
chr8.3 | mRNA | 6350956 | 6353750 | 6350956 | ID=MS.gene061258.t1;Parent=MS.gene061258 |
chr8.3 | exon | 6353206 | 6353750 | 6353206 | ID=MS.gene061258.t1.exon1;Parent=MS.gene061258.t1 |
chr8.3 | CDS | 6353206 | 6353750 | 6353206 | ID=cds.MS.gene061258.t1;Parent=MS.gene061258.t1 |
chr8.3 | exon | 6352730 | 6352873 | 6352730 | ID=MS.gene061258.t1.exon2;Parent=MS.gene061258.t1 |
chr8.3 | CDS | 6352730 | 6352873 | 6352730 | ID=cds.MS.gene061258.t1;Parent=MS.gene061258.t1 |
chr8.3 | exon | 6351953 | 6352460 | 6351953 | ID=MS.gene061258.t1.exon3;Parent=MS.gene061258.t1 |
chr8.3 | CDS | 6351953 | 6352460 | 6351953 | ID=cds.MS.gene061258.t1;Parent=MS.gene061258.t1 |
chr8.3 | exon | 6351234 | 6351264 | 6351234 | ID=MS.gene061258.t1.exon4;Parent=MS.gene061258.t1 |
chr8.3 | CDS | 6351234 | 6351264 | 6351234 | ID=cds.MS.gene061258.t1;Parent=MS.gene061258.t1 |
chr8.3 | exon | 6350956 | 6351008 | 6350956 | ID=MS.gene061258.t1.exon5;Parent=MS.gene061258.t1 |
chr8.3 | CDS | 6350956 | 6351008 | 6350956 | ID=cds.MS.gene061258.t1;Parent=MS.gene061258.t1 |
Gene Sequence |
Protein sequence |