Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061696.t1 | XP_013466739.1 | 93.2 | 308 | 19 | 1 | 1 | 308 | 1 | 306 | 4.40E-144 | 520.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061696.t1 | A0A072VRN1 | 93.2 | 308 | 19 | 1 | 1 | 308 | 1 | 306 | 3.2e-144 | 520.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene061696.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061696.t1 | MTR_1g034500 | 93.182 | 308 | 19 | 1 | 1 | 308 | 1 | 306 | 0.0 | 595 |
| MS.gene061696.t1 | MTR_2g045670 | 64.309 | 311 | 60 | 8 | 1 | 309 | 20 | 281 | 8.67e-124 | 355 |
| MS.gene061696.t1 | MTR_2g045700 | 64.309 | 311 | 69 | 9 | 1 | 309 | 1 | 271 | 1.20e-119 | 345 |
| MS.gene061696.t1 | MTR_2g045630 | 66.129 | 248 | 57 | 7 | 76 | 308 | 42 | 277 | 1.34e-97 | 289 |
| MS.gene061696.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 252 | 337 | 2.29e-20 | 90.1 |
| MS.gene061696.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 194 | 279 | 2.46e-20 | 89.0 |
| MS.gene061696.t1 | MTR_8g077950 | 48.837 | 86 | 42 | 1 | 220 | 303 | 254 | 339 | 2.53e-20 | 90.1 |
| MS.gene061696.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 286 | 380 | 4.58e-12 | 66.6 |
| MS.gene061696.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 284 | 378 | 5.47e-12 | 66.2 |
| MS.gene061696.t1 | MTR_8g070820 | 24.746 | 295 | 174 | 10 | 28 | 291 | 71 | 348 | 3.10e-11 | 63.9 |
| MS.gene061696.t1 | MTR_8g070820 | 36.709 | 79 | 50 | 0 | 213 | 291 | 296 | 374 | 4.66e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061696.t1 | AT4G36730 | 25.000 | 304 | 203 | 6 | 12 | 303 | 9 | 299 | 2.46e-22 | 95.1 |
| MS.gene061696.t1 | AT4G36730 | 25.649 | 308 | 198 | 8 | 12 | 303 | 9 | 301 | 2.06e-21 | 92.8 |
| MS.gene061696.t1 | AT2G35530 | 41.176 | 68 | 40 | 0 | 224 | 291 | 305 | 372 | 1.17e-12 | 68.6 |
Find 57 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTATGTGGGGTTTAT+TGG | 0.126290 | 1.3:-19229647 | None:intergenic |
| TCTGGTCTGGCTCAGAATTT+AGG | 0.161997 | 1.3:+19230650 | MS.gene061696:CDS |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | 1.3:+19229947 | MS.gene061696:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | 1.3:-19230449 | None:intergenic |
| ACTGGTGAATCAAGAGAATT+TGG | 0.246962 | 1.3:+19230028 | MS.gene061696:CDS |
| TAGCAAATAAGTTGAAATCT+TGG | 0.305874 | 1.3:-19229979 | None:intergenic |
| TCACCAGTCATTAAACTTAC+AGG | 0.311555 | 1.3:-19230013 | None:intergenic |
| TGTGGTAACATAGGTTTGTT+TGG | 0.349768 | 1.3:-19229236 | None:intergenic |
| CTGGTCTGGCTCAGAATTTA+GGG | 0.370245 | 1.3:+19230651 | MS.gene061696:CDS |
| AAGGAAGAATCCACTTCGTT+TGG | 0.374827 | 1.3:+19229068 | MS.gene061696:CDS |
| GAAGAGCTAGTTAAGAAGTA+TGG | 0.383568 | 1.3:+19234875 | MS.gene061696:CDS |
| AATAGATCTGCAATTGATTC+TGG | 0.403345 | 1.3:-19234899 | None:intergenic |
| AAACAGGCTTATTACAATCC+TGG | 0.410680 | 1.3:+19229387 | MS.gene061696:intron |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | 1.3:+19229467 | MS.gene061696:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 1.3:+19231893 | MS.gene061696:CDS |
| TTCCTTGTAGAAAATCCATC+TGG | 0.463105 | 1.3:+19230632 | MS.gene061696:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | 1.3:+19233010 | MS.gene061696:CDS |
| GTTAAAATGCTGGACCTCAA+TGG | 0.466790 | 1.3:-19233054 | None:intergenic |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | 1.3:+19229088 | MS.gene061696:CDS |
| TGTAGAAAATCCATCTGGTC+TGG | 0.486514 | 1.3:+19230637 | MS.gene061696:intron |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | 1.3:+19232956 | MS.gene061696:CDS |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | 1.3:-19232992 | None:intergenic |
| AACAGGCTTATTACAATCCT+GGG | 0.495397 | 1.3:+19229388 | MS.gene061696:intron |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | 1.3:-19229095 | None:intergenic |
| GGTTTATTGGACAGCCTCAC+GGG | 0.515395 | 1.3:-19229634 | None:intergenic |
| GGGTTTATTGGACAGCCTCA+CGG | 0.528698 | 1.3:-19229635 | None:intergenic |
| CTTCAACGTGATGCTCTACA+TGG | 0.529457 | 1.3:+19229610 | MS.gene061696:CDS |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | 1.3:-19229453 | None:intergenic |
| AAATTCTGAGCCAGACCAGA+TGG | 0.553977 | 1.3:-19230647 | None:intergenic |
| ACATTGGACTACAGCTATGC+AGG | 0.556528 | 1.3:+19229256 | MS.gene061696:CDS |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | 1.3:-19230089 | None:intergenic |
| GGCTCACCTCAACAACTATG+TGG | 0.564253 | 1.3:-19229657 | None:intergenic |
| AAGGAGCAGCTGCAAGTGGA+TGG | 0.564358 | 1.3:-19229434 | None:intergenic |
| GTAGTCCAATGTGGTAACAT+AGG | 0.564454 | 1.3:-19229245 | None:intergenic |
| TGGAAGCAAGAGATCACCAG+AGG | 0.574208 | 1.3:+19230208 | MS.gene061696:CDS |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | 1.3:+19230470 | MS.gene061696:CDS |
| CAACCTGTAAGTTTAATGAC+TGG | 0.577669 | 1.3:+19230010 | MS.gene061696:CDS |
| GCTCACCTCAACAACTATGT+GGG | 0.580762 | 1.3:-19229656 | None:intergenic |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | 1.3:-19229438 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | 1.3:+19229049 | None:intergenic |
| TAAACCCCACATAGTTGTTG+AGG | 0.602835 | 1.3:+19229651 | MS.gene061696:CDS |
| ACAAACCTATGTTACCACAT+TGG | 0.603220 | 1.3:+19229240 | MS.gene061696:CDS |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | 1.3:+19233001 | MS.gene061696:CDS |
| AAAGTATTTGGAGTAGACCC+AGG | 0.610691 | 1.3:-19229405 | None:intergenic |
| CACCACAAAGAGTTTCAAGT+AGG | 0.611543 | 1.3:-19234932 | None:intergenic |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | 1.3:+19233040 | MS.gene061696:CDS |
| GTAAGGTCTTCCAAACGAAG+TGG | 0.613460 | 1.3:-19229078 | None:intergenic |
| GGAAGCAAGAGATCACCAGA+GGG | 0.616601 | 1.3:+19230209 | MS.gene061696:CDS |
| GAATTTAGGGACAGTCGTCA+AGG | 0.625189 | 1.3:+19230664 | MS.gene061696:CDS |
| CTCACCTCAACAACTATGTG+GGG | 0.660296 | 1.3:-19229655 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | 1.3:-19229113 | None:intergenic |
| TGTGTGCGCAGTGCAGCAAG+TGG | 0.664216 | 1.3:+19230188 | MS.gene061696:intron |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | 1.3:+19230466 | MS.gene061696:CDS |
| AACATCAACGTCAATAACGT+CGG | 0.681325 | 1.3:-19230696 | None:intergenic |
| ATGCTCTACATGGTCCCGTG+AGG | 0.706895 | 1.3:+19229620 | MS.gene061696:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | 1.3:+19230077 | MS.gene061696:CDS |
| TGCATAGCTGTAGTCCAATG+TGG | 0.721179 | 1.3:-19229254 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAACTAAAAAACT+AGG | + | chr1.3:19233209-19233228 | MS.gene061696:intron | 10.0% |
| !! | ATTTATTTATGATATACTAT+TGG | - | chr1.3:19234310-19234329 | None:intergenic | 10.0% |
| !! | TATTAAATAAAATTAGAGTA+CGG | - | chr1.3:19232124-19232143 | None:intergenic | 10.0% |
| !! | TTTATTATAAGATAATCAAA+AGG | - | chr1.3:19230512-19230531 | None:intergenic | 10.0% |
| !!! | TAATTTTTCATATAAATATG+CGG | + | chr1.3:19230268-19230287 | MS.gene061696:intron | 10.0% |
| !! | AAAATGTAAAAAGAAAATGA+TGG | + | chr1.3:19232042-19232061 | MS.gene061696:intron | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | + | chr1.3:19231211-19231230 | MS.gene061696:intron | 15.0% |
| !! | TCATAAATAAATTATATAGC+AGG | + | chr1.3:19234318-19234337 | MS.gene061696:intron | 15.0% |
| !! | TTAAAATTATTCTTTAGTAC+AGG | + | chr1.3:19230369-19230388 | MS.gene061696:intron | 15.0% |
| !! | TTCTTTAATGAATACTAAAA+CGG | - | chr1.3:19233901-19233920 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | - | chr1.3:19230148-19230167 | None:intergenic | 15.0% |
| !!! | GAAATTTTCATATTTCTTTA+GGG | + | chr1.3:19229776-19229795 | MS.gene061696:intron | 15.0% |
| !!! | TCTTATTTTAAATTTCAAAC+AGG | + | chr1.3:19229371-19229390 | MS.gene061696:intron | 15.0% |
| !!! | TGAAATTTTCATATTTCTTT+AGG | + | chr1.3:19229775-19229794 | MS.gene061696:intron | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | - | chr1.3:19232855-19232874 | None:intergenic | 15.0% |
| !! | AAATGTCAAGTAGAAAAAAT+AGG | - | chr1.3:19232223-19232242 | None:intergenic | 20.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | + | chr1.3:19230344-19230363 | MS.gene061696:intron | 20.0% |
| !! | AAGGAACTTATATAAGTAAA+AGG | + | chr1.3:19233993-19234012 | MS.gene061696:intron | 20.0% |
| !! | AATGTATATAAATTCGACAA+TGG | + | chr1.3:19232002-19232021 | MS.gene061696:intron | 20.0% |
| !! | ACCTTCTTAAAAAATATGTT+TGG | - | chr1.3:19234437-19234456 | None:intergenic | 20.0% |
| !! | ATAAAACTCAACAAATAAAG+AGG | - | chr1.3:19233083-19233102 | None:intergenic | 20.0% |
| !! | ATACTTTCGTAGTTAATAAA+AGG | + | chr1.3:19233234-19233253 | MS.gene061696:intron | 20.0% |
| !! | ATATATCTATTGAAAGGTTT+AGG | - | chr1.3:19229681-19229700 | None:intergenic | 20.0% |
| !! | ATGATGTCTATAAATAACAA+GGG | - | chr1.3:19233484-19233503 | None:intergenic | 20.0% |
| !! | ATGTATATAAATTCGACAAT+GGG | + | chr1.3:19232003-19232022 | MS.gene061696:intron | 20.0% |
| !! | ATTTATGATATACTATTGGA+GGG | - | chr1.3:19234306-19234325 | None:intergenic | 20.0% |
| !! | CAAAGAGATATCATAATAAT+AGG | - | chr1.3:19234646-19234665 | None:intergenic | 20.0% |
| !! | CAATGAATATATCTATTGAA+AGG | - | chr1.3:19229687-19229706 | None:intergenic | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | + | chr1.3:19231322-19231341 | MS.gene061696:intron | 20.0% |
| !! | TAAAACTCAACAAATAAAGA+GGG | - | chr1.3:19233082-19233101 | None:intergenic | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | + | chr1.3:19232617-19232636 | MS.gene061696:intron | 20.0% |
| !! | TATTTATGATATACTATTGG+AGG | - | chr1.3:19234307-19234326 | None:intergenic | 20.0% |
| !! | TCTTTAATGAATACTAAAAC+GGG | - | chr1.3:19233900-19233919 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | - | chr1.3:19232352-19232371 | None:intergenic | 20.0% |
| !! | TTGTAACAAACTTTCTAATT+AGG | + | chr1.3:19234663-19234682 | MS.gene061696:intron | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | + | chr1.3:19229899-19229918 | MS.gene061696:intron | 20.0% |
| !!! | CAATATTTTCTGTAATTATG+AGG | - | chr1.3:19231981-19232000 | None:intergenic | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | - | chr1.3:19230149-19230168 | None:intergenic | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | - | chr1.3:19231526-19231545 | None:intergenic | 20.0% |
| !!! | GTTTTAGTATTCATTAAAGA+AGG | + | chr1.3:19233900-19233919 | MS.gene061696:intron | 20.0% |
| !!! | TAGTAATGGAAGATAATATT+TGG | - | chr1.3:19232756-19232775 | None:intergenic | 20.0% |
| !!! | TGTCTATGAAATTCATTTTA+TGG | + | chr1.3:19229737-19229756 | MS.gene061696:intron | 20.0% |
| !!! | TGTTTGAAAAGTTTTTTTTG+TGG | + | chr1.3:19230770-19230789 | MS.gene061696:intron | 20.0% |
| !!! | TTATTCAAAGCTTTTGATAT+TGG | + | chr1.3:19234755-19234774 | MS.gene061696:intron | 20.0% |
| !!! | TTTTTTCCAAATAAAGAAGT+AGG | + | chr1.3:19234602-19234621 | MS.gene061696:intron | 20.0% |
| ! | AAAACTCAACAAATAAAGAG+GGG | - | chr1.3:19233081-19233100 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGATTGTCAAAC+AGG | + | chr1.3:19231859-19231878 | MS.gene061696:CDS | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | - | chr1.3:19232747-19232766 | None:intergenic | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr1.3:19231893-19231912 | MS.gene061696:CDS | 25.0% |
| ! | AAGTTTGATTCATAACTATC+TGG | + | chr1.3:19231770-19231789 | MS.gene061696:intron | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr1.3:19232593-19232612 | None:intergenic | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | + | chr1.3:19231325-19231344 | MS.gene061696:intron | 25.0% |
| ! | AGGCAATTATTATTAATGAG+TGG | + | chr1.3:19233372-19233391 | MS.gene061696:intron | 25.0% |
| ! | ATACATATTACTGCTTTGTA+CGG | + | chr1.3:19229497-19229516 | MS.gene061696:intron | 25.0% |
| ! | ATGAGGATAACTATGTATAA+CGG | - | chr1.3:19231964-19231983 | None:intergenic | 25.0% |
| ! | ATGTAAAAAGAAAATGATGG+TGG | + | chr1.3:19232045-19232064 | MS.gene061696:intron | 25.0% |
| ! | ATTATCTTCCATTACTATTG+TGG | + | chr1.3:19232759-19232778 | MS.gene061696:intron | 25.0% |
| ! | ATTCAACTAAGATACTTGTT+TGG | + | chr1.3:19233110-19233129 | MS.gene061696:intron | 25.0% |
| ! | CATGATGTCTATAAATAACA+AGG | - | chr1.3:19233485-19233504 | None:intergenic | 25.0% |
| ! | CTACTAATTTGAGTGTAATT+TGG | + | chr1.3:19234841-19234860 | MS.gene061696:intron | 25.0% |
| ! | CTTTAATGAATACTAAAACG+GGG | - | chr1.3:19233899-19233918 | None:intergenic | 25.0% |
| ! | GAATAGAAAAACAAAGATTG+TGG | - | chr1.3:19233449-19233468 | None:intergenic | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | + | chr1.3:19232622-19232641 | MS.gene061696:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | - | chr1.3:19230452-19230471 | None:intergenic | 25.0% |
| ! | GCAAATATTAGAAAACAAGA+TGG | - | chr1.3:19233179-19233198 | None:intergenic | 25.0% |
| ! | GTCATCTAACAAAATTAACT+TGG | - | chr1.3:19234729-19234748 | None:intergenic | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | - | chr1.3:19229816-19229835 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | + | chr1.3:19230466-19230485 | MS.gene061696:CDS | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | + | chr1.3:19232956-19232975 | MS.gene061696:CDS | 25.0% |
| ! | TAATAATAGGTAGAAGAGAT+TGG | - | chr1.3:19234633-19234652 | None:intergenic | 25.0% |
| ! | TAATATGTCCTTATAAAGCT+AGG | - | chr1.3:19231084-19231103 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr1.3:19232594-19232613 | None:intergenic | 25.0% |
| ! | TAGAATGCTAGATTGAAAAA+TGG | - | chr1.3:19231695-19231714 | None:intergenic | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | - | chr1.3:19232852-19232871 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | - | chr1.3:19232349-19232368 | None:intergenic | 25.0% |
| ! | TATGTTTATGGTTCAATTTG+AGG | - | chr1.3:19233640-19233659 | None:intergenic | 25.0% |
| ! | TCTGTAATTTGAATTTCAGA+AGG | + | chr1.3:19230551-19230570 | MS.gene061696:intron | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+TGG | + | chr1.3:19230718-19230737 | MS.gene061696:CDS | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | + | chr1.3:19232621-19232640 | MS.gene061696:intron | 25.0% |
| ! | TGGAAAAAAAAACTTCGAAT+GGG | - | chr1.3:19234591-19234610 | None:intergenic | 25.0% |
| ! | TTACCAATTAGTTGGTTAAT+TGG | - | chr1.3:19233528-19233547 | None:intergenic | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | - | chr1.3:19231561-19231580 | None:intergenic | 25.0% |
| ! | TTGGAAAAAAAAACTTCGAA+TGG | - | chr1.3:19234592-19234611 | None:intergenic | 25.0% |
| ! | TTTATGATATACTATTGGAG+GGG | - | chr1.3:19234305-19234324 | None:intergenic | 25.0% |
| ! | TTTCCAATTAACCAACTAAT+TGG | + | chr1.3:19233522-19233541 | MS.gene061696:intron | 25.0% |
| !! | ATGTGCGATTTTATATAGAA+GGG | - | chr1.3:19234105-19234124 | None:intergenic | 25.0% |
| !! | ATTCTAGCTAAATATGTATG+GGG | + | chr1.3:19231709-19231728 | MS.gene061696:intron | 25.0% |
| !! | CATTCTAGCTAAATATGTAT+GGG | + | chr1.3:19231708-19231727 | MS.gene061696:intron | 25.0% |
| !! | CTAGATTTGCTTAAATTTGT+TGG | + | chr1.3:19231473-19231492 | MS.gene061696:intron | 25.0% |
| !! | GGAGTTGAAAAAAACTTTTT+GGG | - | chr1.3:19232103-19232122 | None:intergenic | 25.0% |
| !! | TAATTGGTAACTAACTCATT+AGG | + | chr1.3:19233538-19233557 | MS.gene061696:intron | 25.0% |
| !! | TACAATTTGTTCTTGTTCTT+CGG | + | chr1.3:19230100-19230119 | MS.gene061696:intron | 25.0% |
| !! | TAGCAAATAAGTTGAAATCT+TGG | - | chr1.3:19229982-19230001 | None:intergenic | 25.0% |
| !! | TATTGTTGTTGTATGATCAT+AGG | + | chr1.3:19232711-19232730 | MS.gene061696:intron | 25.0% |
| !! | TTATTTGGAACATGATTGTA+GGG | + | chr1.3:19232594-19232613 | MS.gene061696:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr1.3:19232593-19232612 | MS.gene061696:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | - | chr1.3:19231520-19231539 | None:intergenic | 25.0% |
| !!! | AGTTGAAATCTTGGTTTTTT+TGG | - | chr1.3:19229973-19229992 | None:intergenic | 25.0% |
| !!! | ATTTTCATATTTCTTTAGGG+TGG | + | chr1.3:19229779-19229798 | MS.gene061696:intron | 25.0% |
| !!! | CAGTTTTTTAGTAAGATAAC+TGG | + | chr1.3:19230816-19230835 | MS.gene061696:intron | 25.0% |
| !!! | CATATTTTTTAAGAAGGTCT+TGG | + | chr1.3:19234439-19234458 | MS.gene061696:intron | 25.0% |
| !!! | CTTATTTTTCTTGTGTAAGA+AGG | + | chr1.3:19234474-19234493 | MS.gene061696:intron | 25.0% |
| !!! | GCCAAACATATTTTTTAAGA+AGG | + | chr1.3:19234433-19234452 | MS.gene061696:intron | 25.0% |
| !!! | GGATGGTTATAAAAAGTATT+TGG | - | chr1.3:19229420-19229439 | None:intergenic | 25.0% |
| !!! | TTGTTTTGAGGTTATGTTTA+TGG | - | chr1.3:19233652-19233671 | None:intergenic | 25.0% |
| !!! | TTTTCATATTTCTTTAGGGT+GGG | + | chr1.3:19229780-19229799 | MS.gene061696:intron | 25.0% |
| AAAAGTTATGTTGTAACACG+AGG | - | chr1.3:19231150-19231169 | None:intergenic | 30.0% | |
| AAAGCACATAACAAAACTCT+GGG | + | chr1.3:19232359-19232378 | MS.gene061696:intron | 30.0% | |
| AACTCATACACAATTCATCA+TGG | - | chr1.3:19229868-19229887 | None:intergenic | 30.0% | |
| AAGAAATGAAAACTGTTAGG+AGG | + | chr1.3:19233257-19233276 | MS.gene061696:intron | 30.0% | |
| AAGTAAAAGGAGAATGAACT+AGG | + | chr1.3:19234006-19234025 | MS.gene061696:intron | 30.0% | |
| AATGCTAGATTGAAAAATGG+TGG | - | chr1.3:19231692-19231711 | None:intergenic | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | - | chr1.3:19230966-19230985 | None:intergenic | 30.0% | |
| AGGAAGAAATGAAAACTGTT+AGG | + | chr1.3:19233254-19233273 | MS.gene061696:intron | 30.0% | |
| AGGGGAATAAGAATTGAATA+CGG | - | chr1.3:19234086-19234105 | None:intergenic | 30.0% | |
| AGTAAGTAAATTCCTTCTCA+AGG | + | chr1.3:19231742-19231761 | MS.gene061696:intron | 30.0% | |
| ATAAATAACAAGGGTTGAGA+GGG | - | chr1.3:19233475-19233494 | None:intergenic | 30.0% | |
| ATATAAATTCGACAATGGGT+TGG | + | chr1.3:19232007-19232026 | MS.gene061696:intron | 30.0% | |
| ATTCTTTAGTACAGGTCATA+TGG | + | chr1.3:19230377-19230396 | MS.gene061696:intron | 30.0% | |
| CAACAATCTTTCCCTTTATT+TGG | + | chr1.3:19232579-19232598 | MS.gene061696:intron | 30.0% | |
| CAATCATTCACACATGTTAT+AGG | + | chr1.3:19230900-19230919 | MS.gene061696:intron | 30.0% | |
| CAATGAAAATGATTCCATTG+AGG | + | chr1.3:19233040-19233059 | MS.gene061696:CDS | 30.0% | |
| CGATTGAAAACACTAGTTAT+AGG | + | chr1.3:19230998-19231017 | MS.gene061696:intron | 30.0% | |
| CTAATTTGAGTGTAATTTGG+TGG | + | chr1.3:19234844-19234863 | MS.gene061696:intron | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | - | chr1.3:19232748-19232767 | None:intergenic | 30.0% | |
| GAATTAGGAACAGTAAACAA+TGG | - | chr1.3:19233688-19233707 | None:intergenic | 30.0% | |
| GACATATTAAGCACTAATGT+AGG | + | chr1.3:19231095-19231114 | MS.gene061696:intron | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | + | chr1.3:19229122-19229141 | MS.gene061696:intron | 30.0% | |
| GTCCTAAACATGCATTTAAA+TGG | + | chr1.3:19232291-19232310 | MS.gene061696:intron | 30.0% | |
| GTCGCAAAAATAAAACTCTA+AGG | + | chr1.3:19231347-19231366 | MS.gene061696:intron | 30.0% | |
| TAAAGCACATAACAAAACTC+TGG | + | chr1.3:19232358-19232377 | MS.gene061696:intron | 30.0% | |
| TACGGGATATAACAAAATGT+AGG | - | chr1.3:19234068-19234087 | None:intergenic | 30.0% | |
| TATAAATAACAAGGGTTGAG+AGG | - | chr1.3:19233476-19233495 | None:intergenic | 30.0% | |
| TCAGGACTTTCTTGTTAAAT+GGG | + | chr1.3:19234133-19234152 | MS.gene061696:intron | 30.0% | |
| TGAGTTAGTTACCAATTAGT+TGG | - | chr1.3:19233536-19233555 | None:intergenic | 30.0% | |
| TTATAGGCACTCTTTGATAT+TGG | + | chr1.3:19231014-19231033 | MS.gene061696:intron | 30.0% | |
| TTCAACTTCCACAATAGTAA+TGG | - | chr1.3:19232770-19232789 | None:intergenic | 30.0% | |
| TTCAGGACTTTCTTGTTAAA+TGG | + | chr1.3:19234132-19234151 | MS.gene061696:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | - | chr1.3:19232484-19232503 | None:intergenic | 30.0% | |
| ! | AAATGCATGTTTAGGACATA+AGG | - | chr1.3:19232288-19232307 | None:intergenic | 30.0% |
| ! | AATAGATCTGCAATTGATTC+TGG | - | chr1.3:19234902-19234921 | None:intergenic | 30.0% |
| ! | ATGTACTGATGATACAAGTA+AGG | - | chr1.3:19229456-19229475 | None:intergenic | 30.0% |
| ! | CGGAGTTGAAAAAAACTTTT+TGG | - | chr1.3:19232104-19232123 | None:intergenic | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | - | chr1.3:19233042-19233061 | None:intergenic | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | + | chr1.3:19229947-19229966 | MS.gene061696:CDS | 30.0% |
| ! | GATGTGCGATTTTATATAGA+AGG | - | chr1.3:19234106-19234125 | None:intergenic | 30.0% |
| ! | GCATTCTAGCTAAATATGTA+TGG | + | chr1.3:19231707-19231726 | MS.gene061696:intron | 30.0% |
| ! | TATACATACAATGTGTCGAT+GGG | - | chr1.3:19231418-19231437 | None:intergenic | 30.0% |
| ! | TGCCATTTAAATGCATGTTT+AGG | - | chr1.3:19232296-19232315 | None:intergenic | 30.0% |
| ! | TGGTGGTTCATTTTCATTAT+TGG | + | chr1.3:19232062-19232081 | MS.gene061696:intron | 30.0% |
| ! | TGTGCGATTTTATATAGAAG+GGG | - | chr1.3:19234104-19234123 | None:intergenic | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | - | chr1.3:19231513-19231532 | None:intergenic | 30.0% |
| !! | AATGTTTATGCATTTTGGTC+AGG | + | chr1.3:19229904-19229923 | MS.gene061696:intron | 30.0% |
| !! | AATTTGTTATAGTTTCCTCC+TGG | + | chr1.3:19232834-19232853 | MS.gene061696:intron | 30.0% |
| !! | CAAAAATAAAACTCTAAGGC+TGG | + | chr1.3:19231351-19231370 | MS.gene061696:intron | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | + | chr1.3:19229567-19229586 | MS.gene061696:intron | 30.0% |
| !! | TAGTTCTGAGTATTGTATTG+TGG | + | chr1.3:19234791-19234810 | MS.gene061696:intron | 30.0% |
| !! | TTTCATATTTCTTTAGGGTG+GGG | + | chr1.3:19229781-19229800 | MS.gene061696:intron | 30.0% |
| !!! | AATACAAGTTGGTCTTTTGA+TGG | - | chr1.3:19233777-19233796 | None:intergenic | 30.0% |
| AAACAGGCTTATTACAATCC+TGG | + | chr1.3:19229387-19229406 | MS.gene061696:intron | 35.0% | |
| AAATCTAGCAAGATTCGAGA+TGG | - | chr1.3:19231461-19231480 | None:intergenic | 35.0% | |
| AACAACTATGTGGGGTTTAT+TGG | - | chr1.3:19229650-19229669 | None:intergenic | 35.0% | |
| AACAGGCTTATTACAATCCT+GGG | + | chr1.3:19229388-19229407 | MS.gene061696:intron | 35.0% | |
| AACATCAACGTCAATAACGT+CGG | - | chr1.3:19230699-19230718 | None:intergenic | 35.0% | |
| AACTTGGCTATCTTCATGTT+AGG | - | chr1.3:19234713-19234732 | None:intergenic | 35.0% | |
| AAGGTCACAAGAAAAAGCAA+AGG | - | chr1.3:19232269-19232288 | None:intergenic | 35.0% | |
| ACAAACCTATGTTACCACAT+TGG | + | chr1.3:19229240-19229259 | MS.gene061696:CDS | 35.0% | |
| ACCAAGATACCATCACAAAT+TGG | - | chr1.3:19229305-19229324 | None:intergenic | 35.0% | |
| ACCAATTTGTGATGGTATCT+TGG | + | chr1.3:19229301-19229320 | MS.gene061696:intron | 35.0% | |
| ACTCTCACTAACTCATTCTA+CGG | + | chr1.3:19234037-19234056 | MS.gene061696:intron | 35.0% | |
| ACTGGTGAATCAAGAGAATT+TGG | + | chr1.3:19230028-19230047 | MS.gene061696:CDS | 35.0% | |
| ATCAAAGAAACGATGTTCTG+AGG | + | chr1.3:19232449-19232468 | MS.gene061696:intron | 35.0% | |
| ATGCAGTACTCAAACAGAAA+AGG | + | chr1.3:19233974-19233993 | MS.gene061696:intron | 35.0% | |
| ATGTAATTGAATCCACCTAG+TGG | + | chr1.3:19232666-19232685 | MS.gene061696:intron | 35.0% | |
| ATTGACAGTAAAAGGGTCTA+AGG | - | chr1.3:19233732-19233751 | None:intergenic | 35.0% | |
| CAACCTGTAAGTTTAATGAC+TGG | + | chr1.3:19230010-19230029 | MS.gene061696:CDS | 35.0% | |
| CATCGACACATTGTATGTAT+AGG | + | chr1.3:19231417-19231436 | MS.gene061696:intron | 35.0% | |
| CATTATGATATGCACACACT+TGG | + | chr1.3:19230856-19230875 | MS.gene061696:intron | 35.0% | |
| CTAACTTCGAAACATAACAG+TGG | - | chr1.3:19230317-19230336 | None:intergenic | 35.0% | |
| CTATACATACAATGTGTCGA+TGG | - | chr1.3:19231419-19231438 | None:intergenic | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | - | chr1.3:19230092-19230111 | None:intergenic | 35.0% | |
| GAAGAGCTAGTTAAGAAGTA+TGG | + | chr1.3:19234875-19234894 | MS.gene061696:CDS | 35.0% | |
| GATAACAAAACAGCTGTGTT+TGG | + | chr1.3:19232190-19232209 | MS.gene061696:intron | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | - | chr1.3:19229116-19229135 | None:intergenic | 35.0% | |
| GGGGAATAAGAATTGAATAC+GGG | - | chr1.3:19234085-19234104 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | + | chr1.3:19230417-19230436 | MS.gene061696:intron | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | + | chr1.3:19232718-19232737 | MS.gene061696:intron | 35.0% | |
| TAACTATTGCCAATTTGGCA+TGG | - | chr1.3:19231556-19231575 | None:intergenic | 35.0% | |
| TACTCTGAACCAATTTGTGA+TGG | + | chr1.3:19229293-19229312 | MS.gene061696:intron | 35.0% | |
| TAGGAAAGCCTAAAATAAGC+CGG | - | chr1.3:19234392-19234411 | None:intergenic | 35.0% | |
| TATGGTTCAATTTGAGGACA+GGG | - | chr1.3:19233634-19233653 | None:intergenic | 35.0% | |
| TCACCAGTCATTAAACTTAC+AGG | - | chr1.3:19230016-19230035 | None:intergenic | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | + | chr1.3:19229467-19229486 | MS.gene061696:CDS | 35.0% | |
| TCATTTGACTCTGCTGAATT+AGG | - | chr1.3:19233703-19233722 | None:intergenic | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | + | chr1.3:19229088-19229107 | MS.gene061696:CDS | 35.0% | |
| TTAAGCACTAATGTAGGACT+CGG | + | chr1.3:19231101-19231120 | MS.gene061696:intron | 35.0% | |
| TTATGGTTCAATTTGAGGAC+AGG | - | chr1.3:19233635-19233654 | None:intergenic | 35.0% | |
| TTCCTTGTAGAAAATCCATC+TGG | + | chr1.3:19230632-19230651 | MS.gene061696:intron | 35.0% | |
| TTGAGGGATTGACAGTAAAA+GGG | - | chr1.3:19233739-19233758 | None:intergenic | 35.0% | |
| TTTGAGGGATTGACAGTAAA+AGG | - | chr1.3:19233740-19233759 | None:intergenic | 35.0% | |
| ! | AATGAGTTAGTGAGAGTATG+TGG | - | chr1.3:19234034-19234053 | None:intergenic | 35.0% |
| ! | ACTAGGTGGATTCAATTACA+TGG | - | chr1.3:19232667-19232686 | None:intergenic | 35.0% |
| ! | AGTGATGGAATGTAACCATA+TGG | + | chr1.3:19231226-19231245 | MS.gene061696:intron | 35.0% |
| ! | ATACATACAATGTGTCGATG+GGG | - | chr1.3:19231417-19231436 | None:intergenic | 35.0% |
| ! | ATTTGAGTGTAATTTGGTGG+TGG | + | chr1.3:19234847-19234866 | MS.gene061696:intron | 35.0% |
| ! | GTGATGGAATGTAACCATAT+GGG | + | chr1.3:19231227-19231246 | MS.gene061696:intron | 35.0% |
| ! | TGTGGTAACATAGGTTTGTT+TGG | - | chr1.3:19229239-19229258 | None:intergenic | 35.0% |
| ! | TTAGCTGCATTTCTTTTGAC+AGG | + | chr1.3:19231815-19231834 | MS.gene061696:intron | 35.0% |
| !! | AGGAATGTCCTAGCTTTATA+AGG | + | chr1.3:19231073-19231092 | MS.gene061696:intron | 35.0% |
| !!! | AAGTTGGTCTTTTGATGGAT+AGG | - | chr1.3:19233772-19233791 | None:intergenic | 35.0% |
| !!! | AGTTGGTCTTTTGATGGATA+GGG | - | chr1.3:19233771-19233790 | None:intergenic | 35.0% |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | + | chr1.3:19229931-19229950 | MS.gene061696:CDS | 35.0% |
| AAAGAGGGGAGTTAAAATGC+TGG | - | chr1.3:19233067-19233086 | None:intergenic | 40.0% | |
| AACCTCAAAACAATCCCTCT+AGG | + | chr1.3:19233659-19233678 | MS.gene061696:intron | 40.0% | |
| AAGGAAGAATCCACTTCGTT+TGG | + | chr1.3:19229068-19229087 | MS.gene061696:CDS | 40.0% | |
| AATACTAAAACGGGGTAGAG+AGG | - | chr1.3:19233891-19233910 | None:intergenic | 40.0% | |
| AATCGCACATCATGTTGTTC+AGG | + | chr1.3:19234115-19234134 | MS.gene061696:intron | 40.0% | |
| AATTACATCCTTTCTGTGGC+AGG | + | chr1.3:19230421-19230440 | MS.gene061696:intron | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | - | chr1.3:19231304-19231323 | None:intergenic | 40.0% | |
| ACATTCCTTACCTTACGAGT+CGG | - | chr1.3:19231061-19231080 | None:intergenic | 40.0% | |
| ACCAACTTGTATTCTCTGCA+TGG | + | chr1.3:19233784-19233803 | MS.gene061696:intron | 40.0% | |
| ACCTCAAAACAATCCCTCTA+GGG | + | chr1.3:19233660-19233679 | MS.gene061696:intron | 40.0% | |
| ACTCTGTAAAAGGAGAAGCT+CGG | + | chr1.3:19234411-19234430 | MS.gene061696:intron | 40.0% | |
| AGGAAAGCCTAAAATAAGCC+GGG | - | chr1.3:19234391-19234410 | None:intergenic | 40.0% | |
| AGGCTTTCCTACTCTGTAAA+AGG | + | chr1.3:19234401-19234420 | MS.gene061696:intron | 40.0% | |
| AGGTTGTTATGCAAGTCGAT+AGG | + | chr1.3:19234494-19234513 | MS.gene061696:intron | 40.0% | |
| ATAGCTCTTCACATTCTTGC+TGG | - | chr1.3:19232935-19232954 | None:intergenic | 40.0% | |
| ATAGGTAGAAGAGATTGGAG+AGG | - | chr1.3:19234628-19234647 | None:intergenic | 40.0% | |
| ATCTGAGGATTGTCATGTCA+CGG | - | chr1.3:19233942-19233961 | None:intergenic | 40.0% | |
| ATGAAAACTGTTAGGAGGTC+AGG | + | chr1.3:19233262-19233281 | MS.gene061696:intron | 40.0% | |
| CAAACTTAGCAACCTTGAGA+AGG | - | chr1.3:19231757-19231776 | None:intergenic | 40.0% | |
| CAAGTACCAACAATCCCTTT+AGG | + | chr1.3:19233562-19233581 | MS.gene061696:intron | 40.0% | |
| CAATCGCAGATGACACAAAA+TGG | - | chr1.3:19230984-19231003 | None:intergenic | 40.0% | |
| CATTTGACGCAATGTATCTG+AGG | - | chr1.3:19233957-19233976 | None:intergenic | 40.0% | |
| CTTTCTTAGACTAGGACAGA+TGG | + | chr1.3:19229527-19229546 | MS.gene061696:intron | 40.0% | |
| GACAATACAACCCACCTAAA+GGG | - | chr1.3:19233579-19233598 | None:intergenic | 40.0% | |
| GAGAGGCCTACTTCTTTATT+TGG | - | chr1.3:19234611-19234630 | None:intergenic | 40.0% | |
| GCATGCTTCTTTCTTAGACT+AGG | + | chr1.3:19229519-19229538 | MS.gene061696:intron | 40.0% | |
| GTACGAAACTAACACCCATA+TGG | - | chr1.3:19231244-19231263 | None:intergenic | 40.0% | |
| GTAGTCCAATGTGGTAACAT+AGG | - | chr1.3:19229248-19229267 | None:intergenic | 40.0% | |
| GTGGTATCATACTCAAAGGT+GGG | - | chr1.3:19234347-19234366 | None:intergenic | 40.0% | |
| GTTAAAATGCTGGACCTCAA+TGG | - | chr1.3:19233057-19233076 | None:intergenic | 40.0% | |
| TAAACCCCACATAGTTGTTG+AGG | + | chr1.3:19229651-19229670 | MS.gene061696:CDS | 40.0% | |
| TAATTAGCAGCAACACACGA+TGG | + | chr1.3:19233855-19233874 | MS.gene061696:intron | 40.0% | |
| TACCAACAATCCCTTTAGGT+GGG | + | chr1.3:19233566-19233585 | MS.gene061696:intron | 40.0% | |
| TACTGCGGATGGTAAGATTA+TGG | + | chr1.3:19230481-19230500 | MS.gene061696:intron | 40.0% | |
| TCCATGCAGAGAATACAAGT+TGG | - | chr1.3:19233788-19233807 | None:intergenic | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | + | chr1.3:19230470-19230489 | MS.gene061696:CDS | 40.0% | |
| TGAAGATGAATCCCGTCAAT+TGG | + | chr1.3:19233298-19233317 | MS.gene061696:intron | 40.0% | |
| TGACAATACAACCCACCTAA+AGG | - | chr1.3:19233580-19233599 | None:intergenic | 40.0% | |
| TGTAGAAAATCCATCTGGTC+TGG | + | chr1.3:19230637-19230656 | MS.gene061696:intron | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | + | chr1.3:19230060-19230079 | MS.gene061696:CDS | 40.0% | |
| TTGGGGTTACCAATTACTAG+TGG | + | chr1.3:19229804-19229823 | MS.gene061696:intron | 40.0% | |
| ! | AAAGTATTTGGAGTAGACCC+AGG | - | chr1.3:19229408-19229427 | None:intergenic | 40.0% |
| ! | AAGTCTGCTCTTTTACCACT+AGG | - | chr1.3:19232684-19232703 | None:intergenic | 40.0% |
| ! | AGCTTCTCCTTTTACAGAGT+AGG | - | chr1.3:19234411-19234430 | None:intergenic | 40.0% |
| ! | ATTGACCAAGAGTTGGTTCT+TGG | - | chr1.3:19233423-19233442 | None:intergenic | 40.0% |
| ! | CTGCATTTCTTTTGACAGGA+AGG | + | chr1.3:19231819-19231838 | MS.gene061696:intron | 40.0% |
| ! | GATAGGGATGAGACTTTTGA+GGG | - | chr1.3:19233755-19233774 | None:intergenic | 40.0% |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | + | chr1.3:19233010-19233029 | MS.gene061696:CDS | 40.0% |
| ! | TTGACCAAGAGTTGGTTCTT+GGG | - | chr1.3:19233422-19233441 | None:intergenic | 40.0% |
| !! | ATATTTCTTTAGGGTGGGGT+TGG | + | chr1.3:19229785-19229804 | MS.gene061696:intron | 40.0% |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | + | chr1.3:19229573-19229592 | MS.gene061696:intron | 40.0% |
| !! | GACCAGATGGATTTTCTACA+AGG | - | chr1.3:19230637-19230656 | None:intergenic | 40.0% |
| !! | TATTTCTTTAGGGTGGGGTT+GGG | + | chr1.3:19229786-19229805 | MS.gene061696:intron | 40.0% |
| !!! | AGGACAGGGTGAATGTTTTT+TGG | - | chr1.3:19233620-19233639 | None:intergenic | 40.0% |
| !!! | GACAGGGTGAATGTTTTTTG+GGG | - | chr1.3:19233618-19233637 | None:intergenic | 40.0% |
| !!! | GGACAGGGTGAATGTTTTTT+GGG | - | chr1.3:19233619-19233638 | None:intergenic | 40.0% |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | - | chr1.3:19230070-19230089 | None:intergenic | 40.0% |
| AAAACTGTTAGGAGGTCAGG+TGG | + | chr1.3:19233265-19233284 | MS.gene061696:intron | 45.0% | |
| AAAGTGCAGGTAGCCAAGTT+AGG | - | chr1.3:19234233-19234252 | None:intergenic | 45.0% | |
| AAATTCTGAGCCAGACCAGA+TGG | - | chr1.3:19230650-19230669 | None:intergenic | 45.0% | |
| AACCCACCTAAAGGGATTGT+TGG | - | chr1.3:19233571-19233590 | None:intergenic | 45.0% | |
| AATCCCGTCAATTGGCAAAG+AGG | + | chr1.3:19233306-19233325 | MS.gene061696:intron | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | + | chr1.3:19229256-19229275 | MS.gene061696:CDS | 45.0% | |
| ACGAGGTAGTGTGGACTTAT+TGG | - | chr1.3:19231133-19231152 | None:intergenic | 45.0% | |
| AGTAAACAATGGCACCCTAG+AGG | - | chr1.3:19233677-19233696 | None:intergenic | 45.0% | |
| AGTGGAATTCACGTCGTTAC+TGG | + | chr1.3:19233390-19233409 | MS.gene061696:intron | 45.0% | |
| CTCACCTCAACAACTATGTG+GGG | - | chr1.3:19229658-19229677 | None:intergenic | 45.0% | |
| CTTCAACGTGATGCTCTACA+TGG | + | chr1.3:19229610-19229629 | MS.gene061696:CDS | 45.0% | |
| CTTCTGCACCCAAAAATGAC+AGG | + | chr1.3:19230059-19230078 | MS.gene061696:CDS | 45.0% | |
| GAATTTAGGGACAGTCGTCA+AGG | + | chr1.3:19230664-19230683 | MS.gene061696:CDS | 45.0% | |
| GCTCACCTCAACAACTATGT+GGG | - | chr1.3:19229659-19229678 | None:intergenic | 45.0% | |
| GGAGGGGAAAAAAATTGCAC+AGG | - | chr1.3:19234289-19234308 | None:intergenic | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | + | chr1.3:19231914-19231933 | MS.gene061696:intron | 45.0% | |
| GGTGGTATCATACTCAAAGG+TGG | - | chr1.3:19234348-19234367 | None:intergenic | 45.0% | |
| GGTTCCTCTTTGCCAATTGA+CGG | - | chr1.3:19233313-19233332 | None:intergenic | 45.0% | |
| GTAAACAATGGCACCCTAGA+GGG | - | chr1.3:19233676-19233695 | None:intergenic | 45.0% | |
| GTAAGGTCTTCCAAACGAAG+TGG | - | chr1.3:19229081-19229100 | None:intergenic | 45.0% | |
| GTACCAACAATCCCTTTAGG+TGG | + | chr1.3:19233565-19233584 | MS.gene061696:intron | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | - | chr1.3:19229554-19229573 | None:intergenic | 45.0% | |
| GTTCCTCTTTGCCAATTGAC+GGG | - | chr1.3:19233312-19233331 | None:intergenic | 45.0% | |
| TCCATCTGATGTGCCTAACT+TGG | + | chr1.3:19234217-19234236 | MS.gene061696:intron | 45.0% | |
| TCTTCACATTCTTGCTGGCA+AGG | - | chr1.3:19232930-19232949 | None:intergenic | 45.0% | |
| TGAGCTGCAGTTCATGTCTT+TGG | - | chr1.3:19230586-19230605 | None:intergenic | 45.0% | |
| TGCATAGCTGTAGTCCAATG+TGG | - | chr1.3:19229257-19229276 | None:intergenic | 45.0% | |
| TGTTGTAACACGAGGTAGTG+TGG | - | chr1.3:19231142-19231161 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | + | chr1.3:19233001-19233020 | MS.gene061696:CDS | 45.0% |
| ! | ATATGGTGTTAAGCCCACTG+TGG | - | chr1.3:19233335-19233354 | None:intergenic | 45.0% |
| ! | CTGGTCTGGCTCAGAATTTA+GGG | + | chr1.3:19230651-19230670 | MS.gene061696:CDS | 45.0% |
| ! | GGATAGGGATGAGACTTTTG+AGG | - | chr1.3:19233756-19233775 | None:intergenic | 45.0% |
| ! | TATGGTGTTAAGCCCACTGT+GGG | - | chr1.3:19233334-19233353 | None:intergenic | 45.0% |
| ! | TCTGCTCTTTTACCACTAGG+TGG | - | chr1.3:19232681-19232700 | None:intergenic | 45.0% |
| ! | TCTGGTCTGGCTCAGAATTT+AGG | + | chr1.3:19230650-19230669 | MS.gene061696:CDS | 45.0% |
| ! | TTTTGGTCAGGATGCTGCAA+AGG | + | chr1.3:19229916-19229935 | MS.gene061696:intron | 45.0% |
| !! | ACCCTAGAGGGATTGTTTTG+AGG | - | chr1.3:19233664-19233683 | None:intergenic | 45.0% |
| !! | ATTTCTTTAGGGTGGGGTTG+GGG | + | chr1.3:19229787-19229806 | MS.gene061696:intron | 45.0% |
| !! | GTGTAATTTGGTGGTGGAAC+AGG | + | chr1.3:19234853-19234872 | MS.gene061696:intron | 45.0% |
| !! | TAAGACCGACTCGTAAGGTA+AGG | + | chr1.3:19231053-19231072 | MS.gene061696:intron | 45.0% |
| !! | TCTCATAAGACCGACTCGTA+AGG | + | chr1.3:19231048-19231067 | MS.gene061696:intron | 45.0% |
| !! | TGAGGCACCGTGAAATTGTA+AGG | - | chr1.3:19229098-19229117 | None:intergenic | 45.0% |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | - | chr1.3:19230057-19230076 | None:intergenic | 45.0% |
| !!! | CTGTCATTTTGATCTCCCTC+TGG | - | chr1.3:19230227-19230246 | None:intergenic | 45.0% |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | - | chr1.3:19230071-19230090 | None:intergenic | 45.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | - | chr1.3:19231205-19231224 | None:intergenic | 5.0% |
| AAGTAAGGAGCAGCTGCAAG+TGG | - | chr1.3:19229441-19229460 | None:intergenic | 50.0% | |
| ACAAGATCAGTTGCGCATGC+AGG | - | chr1.3:19231590-19231609 | None:intergenic | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | + | chr1.3:19230077-19230096 | MS.gene061696:CDS | 50.0% | |
| AGGAGAATCCTGCCACAGAA+AGG | - | chr1.3:19230432-19230451 | None:intergenic | 50.0% | |
| AGGCACATCAGATGGACAAG+TGG | - | chr1.3:19234213-19234232 | None:intergenic | 50.0% | |
| CAGATGGACAAGTGGGAGTA+GGG | - | chr1.3:19234205-19234224 | None:intergenic | 50.0% | |
| CTACCTGCACTTTGCTGACA+TGG | + | chr1.3:19234240-19234259 | MS.gene061696:intron | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | + | chr1.3:19230064-19230083 | MS.gene061696:CDS | 50.0% | |
| GCCAAGTTAGGCACATCAGA+TGG | - | chr1.3:19234221-19234240 | None:intergenic | 50.0% | |
| GCTTAGCAAGCGTTTGTGCT+AGG | - | chr1.3:19232995-19233014 | None:intergenic | 50.0% | |
| GGAAGCAAGAGATCACCAGA+GGG | + | chr1.3:19230209-19230228 | MS.gene061696:CDS | 50.0% | |
| GGCACATCAGATGGACAAGT+GGG | - | chr1.3:19234212-19234231 | None:intergenic | 50.0% | |
| GGCGGTGGTATCATACTCAA+AGG | - | chr1.3:19234351-19234370 | None:intergenic | 50.0% | |
| GGCTCACCTCAACAACTATG+TGG | - | chr1.3:19229660-19229679 | None:intergenic | 50.0% | |
| GGGTTTATTGGACAGCCTCA+CGG | - | chr1.3:19229638-19229657 | None:intergenic | 50.0% | |
| GGTTTATTGGACAGCCTCAC+GGG | - | chr1.3:19229637-19229656 | None:intergenic | 50.0% | |
| GTATGATACCACCGCCACTT+AGG | + | chr1.3:19234355-19234374 | MS.gene061696:intron | 50.0% | |
| TCAGATGGACAAGTGGGAGT+AGG | - | chr1.3:19234206-19234225 | None:intergenic | 50.0% | |
| TGGAAGCAAGAGATCACCAG+AGG | + | chr1.3:19230208-19230227 | MS.gene061696:CDS | 50.0% | |
| ! | ACCAAGAGTTGGTTCTTGGG+CGG | - | chr1.3:19233419-19233438 | None:intergenic | 50.0% |
| ! | GTGCATTGCAGCAGGTTTTG+TGG | + | chr1.3:19231936-19231955 | MS.gene061696:intron | 50.0% |
| !! | CGTTTGGCCCGGCTTATTTT+AGG | + | chr1.3:19234381-19234400 | MS.gene061696:intron | 50.0% |
| !! | GTGGAGCATTGACCAAGAGT+TGG | - | chr1.3:19233430-19233449 | None:intergenic | 50.0% |
| AAACGCTACCTAAGTGGCGG+TGG | - | chr1.3:19234366-19234385 | None:intergenic | 55.0% | |
| AAGGAGCAGCTGCAAGTGGA+TGG | - | chr1.3:19229437-19229456 | None:intergenic | 55.0% | |
| ACCGCCACTTAGGTAGCGTT+TGG | + | chr1.3:19234365-19234384 | MS.gene061696:intron | 55.0% | |
| ACCGCCCAAGAACCAACTCT+TGG | + | chr1.3:19233415-19233434 | MS.gene061696:intron | 55.0% | |
| ATGCTCTACATGGTCCCGTG+AGG | + | chr1.3:19229620-19229639 | MS.gene061696:CDS | 55.0% | |
| CACTTAGGTAGCGTTTGGCC+CGG | + | chr1.3:19234370-19234389 | MS.gene061696:intron | 55.0% | |
| CATGACTGGTGCATTGCAGC+AGG | + | chr1.3:19231928-19231947 | MS.gene061696:intron | 55.0% | |
| CTGCTGCAATGCACCAGTCA+TGG | - | chr1.3:19231930-19231949 | None:intergenic | 55.0% | |
| GAGCCATGTCAGCAAAGTGC+AGG | - | chr1.3:19234246-19234265 | None:intergenic | 55.0% | |
| GCCAAACGCTACCTAAGTGG+CGG | - | chr1.3:19234369-19234388 | None:intergenic | 55.0% | |
| GGCAAAGAGGAACCCACAGT+GGG | + | chr1.3:19233319-19233338 | MS.gene061696:intron | 55.0% | |
| TCCACGACGCCATGCCAAAT+TGG | + | chr1.3:19231544-19231563 | MS.gene061696:intron | 55.0% | |
| TGGCAAAGAGGAACCCACAG+TGG | + | chr1.3:19233318-19233337 | MS.gene061696:intron | 55.0% | |
| ! | AGTAGGGAGTGTGTGAGGAG+AGG | - | chr1.3:19234189-19234208 | None:intergenic | 55.0% |
| ! | GTCGATGGGGCATCTCATGT+GGG | - | chr1.3:19231404-19231423 | None:intergenic | 55.0% |
| ! | TGTCGATGGGGCATCTCATG+TGG | - | chr1.3:19231405-19231424 | None:intergenic | 55.0% |
| CGGGCCAAACGCTACCTAAG+TGG | - | chr1.3:19234372-19234391 | None:intergenic | 60.0% | |
| GCCAATTTGGCATGGCGTCG+TGG | - | chr1.3:19231548-19231567 | None:intergenic | 60.0% | |
| TGTGTGCGCAGTGCAGCAAG+TGG | + | chr1.3:19230188-19230207 | MS.gene061696:intron | 60.0% | |
| ! | GTGGGAGTAGGGAGTGTGTG+AGG | - | chr1.3:19234194-19234213 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 19229062 | 19234940 | 19229062 | ID=MS.gene061696 |
| chr1.3 | mRNA | 19229062 | 19234940 | 19229062 | ID=MS.gene061696.t1;Parent=MS.gene061696 |
| chr1.3 | exon | 19229062 | 19229124 | 19229062 | ID=MS.gene061696.t1.exon1;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19229062 | 19229124 | 19229062 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19229230 | 19229277 | 19229230 | ID=MS.gene061696.t1.exon2;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19229230 | 19229277 | 19229230 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19229393 | 19229488 | 19229393 | ID=MS.gene061696.t1.exon3;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19229393 | 19229488 | 19229393 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19229595 | 19229672 | 19229595 | ID=MS.gene061696.t1.exon4;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19229595 | 19229672 | 19229595 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19229926 | 19230098 | 19229926 | ID=MS.gene061696.t1.exon5;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19229926 | 19230098 | 19229926 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19230199 | 19230253 | 19230199 | ID=MS.gene061696.t1.exon6;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19230199 | 19230253 | 19230199 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19230443 | 19230491 | 19230443 | ID=MS.gene061696.t1.exon7;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19230443 | 19230491 | 19230443 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19230642 | 19230739 | 19230642 | ID=MS.gene061696.t1.exon8;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19230642 | 19230739 | 19230642 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19231837 | 19231914 | 19231837 | ID=MS.gene061696.t1.exon9;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19231837 | 19231914 | 19231837 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19232936 | 19233061 | 19232936 | ID=MS.gene061696.t1.exon10;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19232936 | 19233061 | 19232936 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| chr1.3 | exon | 19234875 | 19234940 | 19234875 | ID=MS.gene061696.t1.exon11;Parent=MS.gene061696.t1 |
| chr1.3 | CDS | 19234875 | 19234940 | 19234875 | ID=cds.MS.gene061696.t1;Parent=MS.gene061696.t1 |
| Gene Sequence |
| Protein sequence |
