AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062051

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062051.t1 MTR_2g045670 83.270 263 27 1 1 246 19 281 3.91e-156 435
MS.gene062051.t1 MTR_2g045700 70.741 270 53 1 3 246 2 271 1.62e-128 364
MS.gene062051.t1 MTR_1g034500 75.676 222 45 5 30 246 90 307 4.72e-107 311
MS.gene062051.t1 MTR_1g034500 74.286 35 8 1 4 37 3 37 4.00e-12 65.1
MS.gene062051.t1 MTR_2g045630 72.197 223 45 2 37 246 60 278 2.87e-105 306
MS.gene062051.t1 MTR_8g077950 48.750 80 41 0 161 240 200 279 3.23e-18 82.0
MS.gene062051.t1 MTR_8g077950 48.750 80 41 0 161 240 260 339 3.30e-18 82.8
MS.gene062051.t1 MTR_8g077950 48.750 80 41 0 161 240 258 337 3.47e-18 82.8
MS.gene062051.t1 MTR_8g028150 42.647 68 39 0 161 228 280 347 8.36e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062051.t1 AT4G36730 42.500 80 46 0 161 240 220 299 5.93e-15 73.2
MS.gene062051.t1 AT4G36730 42.500 80 46 0 161 240 222 301 6.27e-15 73.2
MS.gene062051.t1 AT2G35530 42.647 68 39 0 161 228 305 372 8.84e-12 64.7

Find 44 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTAGACTGGCACAGAATT+TGG 0.190875 2.3:+44847445 MS.gene062051:CDS
GATTTCCGCTTCGTGCTTAA+AGG 0.234920 2.3:-44847247 None:intergenic
GCAAATAATTTGTTGAAATC+AGG 0.241071 2.3:-44846867 None:intergenic
TGGCAGACCTTACAATTTCT+TGG 0.294838 2.3:+44846520 MS.gene062051:CDS
CGGAAATCTAACATGATTAC+TGG 0.322511 2.3:+44847262 MS.gene062051:CDS
ACTGGCGAATCAAGAGAATA+TGG 0.350738 2.3:+44846921 MS.gene062051:CDS
CACTCTTAAGGAAGAAAATT+CGG 0.357376 2.3:+44848890 MS.gene062051:CDS
AAATTCTGTGCCAGTCTAGA+TGG 0.385888 2.3:-44847443 None:intergenic
TGGAACAGGAAGAGCTAGTT+AGG 0.411729 2.3:+44849346 MS.gene062051:intron
AAGATCAAAGTTAAAGAAAC+AGG 0.415399 2.3:+44848621 MS.gene062051:CDS
AATAGATCTGCAATTGATTC+TGG 0.415707 2.3:-44849378 None:intergenic
ACAAGTTTCTTGAGCATGAC+GGG 0.428556 2.3:+44846476 None:intergenic
AAGAAAGAATCCATTCCATT+TGG 0.432084 2.3:+44846500 MS.gene062051:CDS
TGTGGTAGTATAGGTGTGTT+TGG 0.437228 2.3:-44846660 None:intergenic
CCAGTCATTAAACTTACATC+AGG 0.439376 2.3:-44846903 None:intergenic
CAAATAATTTGTTGAAATCA+GGG 0.443190 2.3:-44846866 None:intergenic
TGCACAGGCTTTCTCAGAAA+TGG 0.443916 2.3:+44846830 MS.gene062051:CDS
CACACCTATACTACCACATT+GGG 0.444425 2.3:+44846665 MS.gene062051:CDS
AAGACTGTCAAACAGGAAAT+CGG 0.451393 2.3:+44848594 MS.gene062051:CDS
TCAAAAGATAGACACTCTTA+AGG 0.455063 2.3:+44848878 MS.gene062051:CDS
GAAGAGCTAGTTAGGTTGTA+TGG 0.478454 2.3:+44849354 MS.gene062051:CDS
GTATCCCAATGTGGTAGTAT+AGG 0.486053 2.3:-44846669 None:intergenic
TGAGGCACCAAGAAATTGTA+AGG 0.489679 2.3:-44846527 None:intergenic
AAATTGTAAGGTCTGCCAAA+TGG 0.515741 2.3:-44846515 None:intergenic
CGATGAAAATGATTCTATTG+AGG 0.536409 2.3:+44848962 MS.gene062051:CDS
GGAAATCTAACATGATTACT+GGG 0.546159 2.3:+44847263 MS.gene062051:CDS
GTAAGGTCTGCCAAATGGAA+TGG 0.548289 2.3:-44846510 None:intergenic
GGAAGCAAGAGATCGACAGA+TGG 0.554192 2.3:+44847082 MS.gene062051:CDS
GAATTTGGAGACAGTGGTCA+AGG 0.554486 2.3:+44847460 MS.gene062051:CDS
TCTAACATGATTACTGGGGA+TGG 0.558549 2.3:+44847268 MS.gene062051:CDS
ACACACCTATACTACCACAT+TGG 0.558988 2.3:+44846664 MS.gene062051:CDS
TGTAGAAAATCCATCTAGAC+TGG 0.559052 2.3:+44847433 MS.gene062051:intron
CCACCACAAAAGTTTCAAGT+AGG 0.565064 2.3:-44849411 None:intergenic
CCTGATGTAAGTTTAATGAC+TGG 0.574077 2.3:+44846903 MS.gene062051:CDS
TATGTGCACAGTGCAGTAAG+TGG 0.575889 2.3:+44847061 MS.gene062051:intron
ACATTGGGATACAACTATGC+AGG 0.582030 2.3:+44846680 MS.gene062051:CDS
CATGATTTACTGACATCTTG+AGG 0.595975 2.3:-44846545 None:intergenic
GAACAATCTGTACCTCATTG+AGG 0.632062 2.3:-44846982 None:intergenic
GGCACAGAATTTGGAGACAG+TGG 0.645845 2.3:+44847454 MS.gene062051:CDS
CAAGTTTCTTGAGCATGACG+GGG 0.655185 2.3:+44846477 None:intergenic
ATTCTCCTTTAAGCACGAAG+CGG 0.677680 2.3:+44847242 MS.gene062051:CDS
TGCATAGTTGTATCCCAATG+TGG 0.691783 2.3:-44846678 None:intergenic
GAAATCTAACATGATTACTG+GGG 0.696860 2.3:+44847264 MS.gene062051:CDS
ATAGGGAAGGGACCTCAATG+AGG 0.698466 2.3:+44846970 MS.gene062051:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTTTTTATATAAATATG+TGG + chr2.3:44847140-44847159 MS.gene062051:intron 10.0%
!! ACAAATATTAGAAAATAAGA+TGG - chr2.3:44849093-44849112 None:intergenic 15.0%
!! ATAAAATTCAACAAATAAGA+AGG - chr2.3:44849005-44849024 None:intergenic 15.0%
!! TAAAATTCAACAAATAAGAA+GGG - chr2.3:44849004-44849023 None:intergenic 15.0%
!! TCGAAAAAAAAAAACTATTT+GGG - chr2.3:44848716-44848735 None:intergenic 15.0%
!! TTAAATAAACTAAGAAACAA+TGG + chr2.3:44849124-44849143 MS.gene062051:intron 15.0%
!! TTCCTTTCTTAAATTATTAT+CGG - chr2.3:44847834-44847853 None:intergenic 15.0%
!!! GTATTATTTTCTTACATTTT+TGG - chr2.3:44848073-44848092 None:intergenic 15.0%
!!! TTAGTTTTTTTTATTCGTAA+AGG - chr2.3:44846767-44846786 None:intergenic 15.0%
!! AAAATTCAACAAATAAGAAG+GGG - chr2.3:44849003-44849022 None:intergenic 20.0%
!! AGAAATCAAAATAGTATTCA+GGG + chr2.3:44849154-44849173 MS.gene062051:intron 20.0%
!! ATTTGTGTTCAATTAGAAAA+AGG + chr2.3:44849067-44849086 MS.gene062051:intron 20.0%
!! GTCGAAAAAAAAAAACTATT+TGG - chr2.3:44848717-44848736 None:intergenic 20.0%
!!! AAGGATTTAATTAGACTTTT+TGG - chr2.3:44847211-44847230 None:intergenic 20.0%
!!! AATGTTTATATATTTTGGTC+AGG + chr2.3:44846803-44846822 MS.gene062051:intron 20.0%
!!! CAAATAATTTGTTGAAATCA+GGG - chr2.3:44846869-44846888 None:intergenic 20.0%
!!! CAACTGTCATATAAAATTTT+CGG + chr2.3:44847185-44847204 MS.gene062051:intron 20.0%
! AAACTTAGCAACATTAAGAA+CGG - chr2.3:44848525-44848544 None:intergenic 25.0%
! AAGATCAAAGTTAAAGAAAC+AGG + chr2.3:44848621-44848640 MS.gene062051:CDS 25.0%
! AAGGAAAATGCTAAATGTTA+CGG + chr2.3:44847848-44847867 MS.gene062051:intron 25.0%
! AATTTATATGCATAGTGTGT+TGG - chr2.3:44848231-44848250 None:intergenic 25.0%
! ACATCATAATGATTCAAAAG+GGG - chr2.3:44847666-44847685 None:intergenic 25.0%
! ACGTAAAAAGAAAAAGATGT+TGG + chr2.3:44848679-44848698 MS.gene062051:intron 25.0%
! ACTCAAATTAGTAGCAATAA+TGG - chr2.3:44849314-44849333 None:intergenic 25.0%
! ACTTTGTAGCTAAATATGTA+TGG + chr2.3:44848476-44848495 MS.gene062051:intron 25.0%
! CACCGATAATAATTTAAGAA+AGG + chr2.3:44847829-44847848 MS.gene062051:intron 25.0%
! CAGGAATATGATTATAACTA+TGG - chr2.3:44848310-44848329 None:intergenic 25.0%
! GAATATGATTATAACTATGG+TGG - chr2.3:44848307-44848326 None:intergenic 25.0%
! GACATCATAATGATTCAAAA+GGG - chr2.3:44847667-44847686 None:intergenic 25.0%
! GAGAAATCAAAATAGTATTC+AGG + chr2.3:44849153-44849172 MS.gene062051:intron 25.0%
! GGATTTGAGAAATAAGATTA+TGG - chr2.3:44847962-44847981 None:intergenic 25.0%
! GTAACATAGATTTAGAGAAA+TGG + chr2.3:44848140-44848159 MS.gene062051:intron 25.0%
! GTCTAATTAAATCCTTTATG+TGG + chr2.3:44847215-44847234 MS.gene062051:intron 25.0%
! TACATATTTAGCTACAAAGT+TGG - chr2.3:44848476-44848495 None:intergenic 25.0%
! TGATGCTCAACTAAAAAATA+TGG + chr2.3:44847505-44847524 MS.gene062051:CDS 25.0%
! TTCTTCACCAAAAAATGATA+GGG + chr2.3:44846953-44846972 MS.gene062051:CDS 25.0%
!! AGTAGCAATAATGGAAAATA+GGG - chr2.3:44849305-44849324 None:intergenic 25.0%
!! CTCAATAGAATCATTTTCAT+CGG - chr2.3:44848964-44848983 None:intergenic 25.0%
!! TAGTAGCAATAATGGAAAAT+AGG - chr2.3:44849306-44849325 None:intergenic 25.0%
!!! AAAGTTTTTTGTTCAGTCTT+TGG - chr2.3:44847042-44847061 None:intergenic 25.0%
!!! AAGTTTTTTGTTCAGTCTTT+GGG - chr2.3:44847041-44847060 None:intergenic 25.0%
!!! GCAAATAATTTGTTGAAATC+AGG - chr2.3:44846870-44846889 None:intergenic 25.0%
AAAAGTCATGTTCTAACACA+TGG - chr2.3:44847781-44847800 None:intergenic 30.0%
AAAGAAAAAGACTGTCAAAC+AGG + chr2.3:44848587-44848606 MS.gene062051:CDS 30.0%
AAAGTTGGATCGATAAATGA+TGG - chr2.3:44848461-44848480 None:intergenic 30.0%
AAGAAAGAATCCATTCCATT+TGG + chr2.3:44846500-44846519 MS.gene062051:CDS 30.0%
AAGAGAAGAATCCACAAAAT+AGG - chr2.3:44847985-44848004 None:intergenic 30.0%
AATTAAATCCTTTATGTGGC+AGG + chr2.3:44847219-44847238 MS.gene062051:intron 30.0%
ACATAGATTTAGAGAAATGG+AGG + chr2.3:44848143-44848162 MS.gene062051:intron 30.0%
ACATGTTGAAAAACTAACAC+AGG - chr2.3:44848329-44848348 None:intergenic 30.0%
AGAGAAGAATCCACAAAATA+GGG - chr2.3:44847984-44848003 None:intergenic 30.0%
ATGGTAACATTTCACATGAA+AGG - chr2.3:44848442-44848461 None:intergenic 30.0%
ATTGACACTTCAGATTAAAC+AGG - chr2.3:44848115-44848134 None:intergenic 30.0%
ATTGCTCTTCATATTCTTTC+TGG - chr2.3:44848857-44848876 None:intergenic 30.0%
CAAAGATAATCGTCACAAAT+TGG - chr2.3:44846729-44846748 None:intergenic 30.0%
CAATTTGTGACGATTATCTT+TGG + chr2.3:44846727-44846746 MS.gene062051:intron 30.0%
CACTCTTAAGGAAGAAAATT+CGG + chr2.3:44848890-44848909 MS.gene062051:CDS 30.0%
CGATGAAAATGATTCTATTG+AGG + chr2.3:44848962-44848981 MS.gene062051:CDS 30.0%
CTACTAATTTGAGTGTGATT+TGG + chr2.3:44849320-44849339 MS.gene062051:intron 30.0%
CTTCTTCACCAAAAAATGAT+AGG + chr2.3:44846952-44846971 MS.gene062051:CDS 30.0%
GAAATCTAACATGATTACTG+GGG + chr2.3:44847264-44847283 MS.gene062051:CDS 30.0%
GATGTCAGTAAATCATGTTA+CGG + chr2.3:44846551-44846570 MS.gene062051:intron 30.0%
GATGTCCACATACTTAAAAA+AGG + chr2.3:44847681-44847700 MS.gene062051:intron 30.0%
GGAAATCTAACATGATTACT+GGG + chr2.3:44847263-44847282 MS.gene062051:CDS 30.0%
GGACATCATAATGATTCAAA+AGG - chr2.3:44847668-44847687 None:intergenic 30.0%
GGATAATAGCATAATAGCTT+AGG - chr2.3:44848183-44848202 None:intergenic 30.0%
TCAAAAGATAGACACTCTTA+AGG + chr2.3:44848878-44848897 MS.gene062051:CDS 30.0%
TTAAATGCAGTTCATGTGTT+TGG - chr2.3:44847383-44847402 None:intergenic 30.0%
! AATAGATCTGCAATTGATTC+TGG - chr2.3:44849381-44849400 None:intergenic 30.0%
!!! AGTGACCTTTTTTAAGTATG+TGG - chr2.3:44847689-44847708 None:intergenic 30.0%
AAATTGTAAGGTCTGCCAAA+TGG - chr2.3:44846518-44846537 None:intergenic 35.0%
AAGACTGTCAAACAGGAAAT+CGG + chr2.3:44848594-44848613 MS.gene062051:CDS 35.0%
ACAGATTGTTCTTGTTCTTC+TGG + chr2.3:44846994-44847013 MS.gene062051:intron 35.0%
AGATTATGGCTAACCATACA+TGG - chr2.3:44847948-44847967 None:intergenic 35.0%
ATGAAAGGCTCATATAAGAC+AGG - chr2.3:44848427-44848446 None:intergenic 35.0%
ATTATGGCTAACCATACATG+GGG - chr2.3:44847946-44847965 None:intergenic 35.0%
CAAACAAACACATCAGAAGT+TGG - chr2.3:44848782-44848801 None:intergenic 35.0%
CACATGAACTGCATTTAATG+TGG + chr2.3:44847385-44847404 MS.gene062051:intron 35.0%
CACCAAAAAATGATAGGGAA+GGG + chr2.3:44846958-44846977 MS.gene062051:CDS 35.0%
CATGATTTACTGACATCTTG+AGG - chr2.3:44846548-44846567 None:intergenic 35.0%
CCAGTCATTAAACTTACATC+AGG - chr2.3:44846906-44846925 None:intergenic 35.0%
CCTGATGTAAGTTTAATGAC+TGG + chr2.3:44846903-44846922 MS.gene062051:CDS 35.0%
CGGAAATCTAACATGATTAC+TGG + chr2.3:44847262-44847281 MS.gene062051:CDS 35.0%
CTTATTTCATCAACTTCCTG+TGG - chr2.3:44848562-44848581 None:intergenic 35.0%
GAGAAGAATCCACAAAATAG+GGG - chr2.3:44847983-44848002 None:intergenic 35.0%
GATTATGGCTAACCATACAT+GGG - chr2.3:44847947-44847966 None:intergenic 35.0%
TACTGGGGATGGTAATATTA+TGG + chr2.3:44847279-44847298 MS.gene062051:intron 35.0%
TAGATTTAGAGAAATGGAGG+TGG + chr2.3:44848146-44848165 MS.gene062051:intron 35.0%
TCACCAAAAAATGATAGGGA+AGG + chr2.3:44846957-44846976 MS.gene062051:CDS 35.0%
TGTAGAAAATCCATCTAGAC+TGG + chr2.3:44847433-44847452 MS.gene062051:intron 35.0%
TTATATGCATAGTGTGTTGG+TGG - chr2.3:44848228-44848247 None:intergenic 35.0%
! CTAATTTGAGTGTGATTTGG+TGG + chr2.3:44849323-44849342 MS.gene062051:intron 35.0%
! TTCTCAAATCCCCTATTTTG+TGG + chr2.3:44847971-44847990 MS.gene062051:intron 35.0%
! TTTGTTCAGTCTTTGGGAAA+AGG - chr2.3:44847035-44847054 None:intergenic 35.0%
!!! CATTTTTTGGTGAAGAAGAC+TGG - chr2.3:44846950-44846969 None:intergenic 35.0%
AAATTCTGTGCCAGTCTAGA+TGG - chr2.3:44847446-44847465 None:intergenic 40.0%
ACACACCTATACTACCACAT+TGG + chr2.3:44846664-44846683 MS.gene062051:CDS 40.0%
ACATGGTAGTCTGGACTTAA+TGG - chr2.3:44847764-44847783 None:intergenic 40.0%
ACATTGGGATACAACTATGC+AGG + chr2.3:44846680-44846699 MS.gene062051:CDS 40.0%
ACTGGCGAATCAAGAGAATA+TGG + chr2.3:44846921-44846940 MS.gene062051:CDS 40.0%
AGGTACATACGACAATGCTT+TGG + chr2.3:44848641-44848660 MS.gene062051:intron 40.0%
ATCTAGACTGGCACAGAATT+TGG + chr2.3:44847445-44847464 MS.gene062051:CDS 40.0%
ATTCTCCTTTAAGCACGAAG+CGG + chr2.3:44847242-44847261 MS.gene062051:CDS 40.0%
CACACCTATACTACCACATT+GGG + chr2.3:44846665-44846684 MS.gene062051:CDS 40.0%
GAACAATCTGTACCTCATTG+AGG - chr2.3:44846985-44847004 None:intergenic 40.0%
GTATCCCAATGTGGTAGTAT+AGG - chr2.3:44846672-44846691 None:intergenic 40.0%
GTCATCTAACACGAAGAAAG+TGG - chr2.3:44849208-44849227 None:intergenic 40.0%
TCTAACATGATTACTGGGGA+TGG + chr2.3:44847268-44847287 MS.gene062051:CDS 40.0%
TCTGTAGTCATTGTGAGACT+TGG + chr2.3:44847732-44847751 MS.gene062051:intron 40.0%
TGAGTCTTGCAAGATATGCT+TGG + chr2.3:44848272-44848291 MS.gene062051:intron 40.0%
TGCATAGTTGTATCCCAATG+TGG - chr2.3:44846681-44846700 None:intergenic 40.0%
TGGCAGACCTTACAATTTCT+TGG + chr2.3:44846520-44846539 MS.gene062051:CDS 40.0%
TGGCTACAAAGAGAGATCAA+AGG - chr2.3:44849188-44849207 None:intergenic 40.0%
TGTGGTAGTATAGGTGTGTT+TGG - chr2.3:44846663-44846682 None:intergenic 40.0%
TGTTCTAACACATGGTAGTC+TGG - chr2.3:44847773-44847792 None:intergenic 40.0%
TTAGTTGCATTTCTTGCCAC+AGG + chr2.3:44848543-44848562 MS.gene062051:intron 40.0%
! ACATCTCATGTGGGTAGTTT+TGG - chr2.3:44848204-44848223 None:intergenic 40.0%
! GAAGAGCTAGTTAGGTTGTA+TGG + chr2.3:44849354-44849373 MS.gene062051:CDS 40.0%
! TGAGGCACCAAGAAATTGTA+AGG - chr2.3:44846530-44846549 None:intergenic 40.0%
!! ATTTGAGTGTGATTTGGTGG+TGG + chr2.3:44849326-44849345 MS.gene062051:intron 40.0%
!! CAAGATATGCTTGGCTTTGT+TGG + chr2.3:44848281-44848300 MS.gene062051:intron 40.0%
!!! GTCCCTTCCCTATCATTTTT+TGG - chr2.3:44846963-44846982 None:intergenic 40.0%
AGAAACGCAAGAATCATGCG+TGG + chr2.3:44847884-44847903 MS.gene062051:intron 45.0%
AGGAGAATCCTGCCACATAA+AGG - chr2.3:44847230-44847249 None:intergenic 45.0%
GAATTTGGAGACAGTGGTCA+AGG + chr2.3:44847460-44847479 MS.gene062051:CDS 45.0%
GATTTCCGCTTCGTGCTTAA+AGG - chr2.3:44847250-44847269 None:intergenic 45.0%
GTAAGGTCTGCCAAATGGAA+TGG - chr2.3:44846513-44846532 None:intergenic 45.0%
TATGTGCACAGTGCAGTAAG+TGG + chr2.3:44847061-44847080 MS.gene062051:intron 45.0%
TGCACAGGCTTTCTCAGAAA+TGG + chr2.3:44846830-44846849 MS.gene062051:CDS 45.0%
TGGAACAGGAAGAGCTAGTT+AGG + chr2.3:44849346-44849365 MS.gene062051:intron 45.0%
TGGCTAACAGTCTTGCATCT+TGG + chr2.3:44847405-44847424 MS.gene062051:intron 45.0%
!!! ATAAAAATGTTTATATATTT+TGG + chr2.3:44846798-44846817 MS.gene062051:intron 5.0%
!!! TTATTTTTTTTTTTTTTTTG+TGG + chr2.3:44847589-44847608 MS.gene062051:intron 5.0%
ATAGGGAAGGGACCTCAATG+AGG + chr2.3:44846970-44846989 MS.gene062051:CDS 50.0%
CTAACCATACATGGGGTAGG+GGG - chr2.3:44847939-44847958 None:intergenic 50.0%
GCTAACCATACATGGGGTAG+GGG - chr2.3:44847940-44847959 None:intergenic 50.0%
GGAAGCAAGAGATCGACAGA+TGG + chr2.3:44847082-44847101 MS.gene062051:CDS 50.0%
GGCACAGAATTTGGAGACAG+TGG + chr2.3:44847454-44847473 MS.gene062051:CDS 50.0%
GGCTAACCATACATGGGGTA+GGG - chr2.3:44847941-44847960 None:intergenic 50.0%
TGGCTAACCATACATGGGGT+AGG - chr2.3:44847942-44847961 None:intergenic 50.0%
! TTTTGGTCAGGATGCTGCAC+AGG + chr2.3:44846815-44846834 MS.gene062051:intron 50.0%
!! GTGTGATTTGGTGGTGGAAC+AGG + chr2.3:44849332-44849351 MS.gene062051:intron 50.0%
!! GTTGGTGGCACATCTCATGT+GGG - chr2.3:44848213-44848232 None:intergenic 50.0%
!! TGTTGGTGGCACATCTCATG+TGG - chr2.3:44848214-44848233 None:intergenic 50.0%
ACTGCCCCCTACCCCATGTA+TGG + chr2.3:44847932-44847951 MS.gene062051:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 44846491 44849419 44846491 ID=MS.gene062051
chr2.3 mRNA 44846491 44849419 44846491 ID=MS.gene062051.t1;Parent=MS.gene062051
chr2.3 exon 44846491 44846553 44846491 ID=MS.gene062051.t1.exon1;Parent=MS.gene062051.t1
chr2.3 CDS 44846491 44846553 44846491 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44846654 44846701 44846654 ID=MS.gene062051.t1.exon2;Parent=MS.gene062051.t1
chr2.3 CDS 44846654 44846701 44846654 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44846825 44846991 44846825 ID=MS.gene062051.t1.exon3;Parent=MS.gene062051.t1
chr2.3 CDS 44846825 44846991 44846825 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44847072 44847126 44847072 ID=MS.gene062051.t1.exon4;Parent=MS.gene062051.t1
chr2.3 CDS 44847072 44847126 44847072 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44847241 44847289 44847241 ID=MS.gene062051.t1.exon5;Parent=MS.gene062051.t1
chr2.3 CDS 44847241 44847289 44847241 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44847438 44847526 44847438 ID=MS.gene062051.t1.exon6;Parent=MS.gene062051.t1
chr2.3 CDS 44847438 44847526 44847438 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44848565 44848642 44848565 ID=MS.gene062051.t1.exon7;Parent=MS.gene062051.t1
chr2.3 CDS 44848565 44848642 44848565 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44848858 44848983 44848858 ID=MS.gene062051.t1.exon8;Parent=MS.gene062051.t1
chr2.3 CDS 44848858 44848983 44848858 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
chr2.3 exon 44849354 44849419 44849354 ID=MS.gene062051.t1.exon9;Parent=MS.gene062051.t1
chr2.3 CDS 44849354 44849419 44849354 ID=cds.MS.gene062051.t1;Parent=MS.gene062051.t1
Gene Sequence

>MS.gene062051

ATGACGGGGAAGAAAGAATCCATTCCATTTGGCAGACCTTACAATTTCTTGGTGCCTCAAGATGTCAGTAAATCATGTTACGGCTGTCTTAACTAATTTTGTTTATGTGCAGTCTTCTTATAGCTGATATAATCTATTTTACTTTGATTTTTCTCTCTAGCAGCAAACTCCAAACACACCTATACTACCACATTGGGATACAACTATGCAGGTGTATAACATTTTCTGCTCTGAACCAATTTGTGACGATTATCTTTGGTCATGTAACTTGCGCCTTTACGAATAAAAAAAACTAACTCATTTTCATATAAAAATGTTTATATATTTTGGTCAGGATGCTGCACAGGCTTTCTCAGAAATGGTACACAGAAGAAACCCTGATTTCAACAAATTATTTGCTAGAAACTCAAAGCCTGATGTAAGTTTAATGACTGGCGAATCAAGAGAATATGGAAACCAGTCTTCTTCACCAAAAAATGATAGGGAAGGGACCTCAATGAGGTACAGATTGTTCTTGTTCTTCTGGTAAACTTGTTAATAGCCTTTTCCCAAAGACTGAACAAAAAACTTTATGTGCACAGTGCAGTAAGTGGAAGCAAGAGATCGACAGATGGAGATCAAGATGACAGTAACAAAGTATGTTTATCGATTAGTTTTTATATAAATATGTGGTTGATGAATGTAATGTGTTCTGCAACTGTCATATAAAATTTTCGGCCAAAAAGTCTAATTAAATCCTTTATGTGGCAGGATTCTCCTTTAAGCACGAAGCGGAAATCTAACATGATTACTGGGGATGGTAATATTATGGATTTTTCTTTTGACTATCTTATAATAAAATGTGATGTTTTAGTATGATTTATAATTTGAATGTTAAGAATGACTAGTACCAAACACATGAACTGCATTTAATGTGGCTAACAGTCTTGCATCTTGGTTTGTTGTAGAAAATCCATCTAGACTGGCACAGAATTTGGAGACAGTGGTCAAGGAATCTGACACTGACGTTGATGTTGATGCTCAACTAAAAAATATGGTATTATAAAGCTTTATGTGTTTTCGTAGCATAAATGAAAAATGTTATTTTTTTTTATTTATTTATTTTTTTTTTTTTTTTGTGGATTAGCTAAACTAGAAGAACAATCAGTCTTTTATTAAGATAACTTTTAAAACCCCTTTTGAATCATTATGATGTCCACATACTTAAAAAAGGTCACTTTATAAGCACTTATTAAGCATTATCTGTAGTCATTGTGAGACTTGGTCTTTTCCATTAAGTCCAGACTACCATGTGTTAGAACATGACTTTTTTAGAACTATAAGACACATACACGTAAACACCGATAATAATTTAAGAAAGGAAAATGCTAAATGTTACGGTAGAATATATGCAAGAAACGCAAGAATCATGCGTGGCAGCATGTAACTCTTTCAAATAATAACTGCCCCCTACCCCATGTATGGTTAGCCATAATCTTATTTCTCAAATCCCCTATTTTGTGGATTCTTCTCTTTCTTGCATAAATAATTCTTACTAAATAGCATTGCTCTTTAAGAAAATAGAAGTGATTGAATGTATCCAAAAATGTAAGAAAATAATACAAAGTGAAACACTCAGACACCTGTTTAATCTGAAGTGTCAATGTAATGTAACATAGATTTAGAGAAATGGAGGTGGCATAAATAAAACCTAAGCTATTATGCTATTATCCAAAACTACCCACATGAGATGTGCCACCAACACACTATGCATATAAATTTAAATTGTTCATTTTGCATCTTGAGTCTTGCAAGATATGCTTGGCTTTGTTGGCCACCATAGTTATAATCATATTCCTGTGTTAGTTTTTCAACATGTAAAAACATCAATTTTCAACTTGTTTAAATTTTTTCTTTTGTTTTAGTTTGCATATTTTTTTTTCTACGCTTCATTCCTGTCTTATATGAGCCTTTCATGTGAAATGTTACCATCATTTATCGATCCAACTTTGTAGCTAAATATGTATGGTGAATACATTTCAGAAAGTAAATCCGTTCTTAATGTTGCTAAGTTTAGTTGCATTTCTTGCCACAGGAAGTTGATGAAATAAGAAAAGAAAGAAAAAGACTGTCAAACAGGAAATCGGCTAAAAGATCAAAGTTAAAGAAACAGGTACATACGACAATGCTTTGGTTGCATATGCTTAAAACGTAAAAAGAAAAAGATGTTGGTTTTCTTCTGTCCCAAATAGTTTTTTTTTTTCGACTCTGATTTTTTAAATTATTAAATGTTAAGATGATCTGATTATCCAACTTCTGATGTGTTTGTTTGATGATCTATTTAACTTTGTATTTCATTTAATGTTCTCATTATTTGTGCTTTGCCAGAAAGAATATGAAGAGCAATGTCAAAAGATAGACACTCTTAAGGAAGAAAATTCGGTTCTAACACAAACGCTCACTGAGCTTTCAGAGAAATGTCTCGAGCTCACCGATGAAAATGATTCTATTGAGGTCAATCATTTTAACTCCCCTTCTTATTTGTTGAATTTTATATCATTCATTAAACTAAGATACTTGTTTGATTTGAGAAAAATATTTGTGTTCAATTAGAAAAAGGCCATCTTATTTTCTAATATTTGTATGAGAAACAATTAAATAAACTAAGAAACAATGGTTAAGCGAGAAATCAAAATAGTATTCAGGGCATTATATCCTTTGATCTCTCTTTGTAGCCACTTTCTTCGTGTTAGATGACAATTATTTATTTAAAGCTTTTCACATTTTTTTATAAAGAAGTGAATTCTGAGTATTGTATTGTAGTTCTCAATGCCCTATTTTCCATTATTGCTACTAATTTGAGTGTGATTTGGTGGTGGAACAGGAAGAGCTAGTTAGGTTGTATGGACCAGAATCAATTGCAGATCTATTGCACATGAAGCCTACTTGA
Protein sequence

>MS.gene062051.t1

MTGKKESIPFGRPYNFLVPQDQTPNTPILPHWDTTMQDAAQAFSEMVHRRNPDFNKLFARNSKPDVSLMTGESREYGNQSSSPKNDREGTSMSAVSGSKRSTDGDQDDSNKDSPLSTKRKSNMITGDENPSRLAQNLETVVKESDTDVDVDAQLKNMEVDEIRKERKRLSNRKSAKRSKLKKQKEYEEQCQKIDTLKEENSVLTQTLTELSEKCLELTDENDSIEEELVRLYGPESIADLLHMKPT